Jatropha Genome Database
- JcCB0130701.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0130701.20 + phase: 0 /partial
(279 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48480.1 | Symbols: | cysteine-type peptidase | chr3:1795732... 230 7e-61
AT4G33620.1 | Symbols: | Ulp1 protease family protein | chr4:16... 75 4e-14
AT1G09730.1 | Symbols: | Ulp1 protease family protein | chr1:31... 73 2e-13
AT1G60220.1 | Symbols: OTS1, ULP1D | ULP1D (UB-LIKE PROTEASE 1D)... 60 2e-09
AT1G10570.1 | Symbols: OTS2, ULP1C | OTS2 (OVERLY TOLERANT TO SA... 57 2e-08
AT1G10570.2 | Symbols: OTS2, ULP1C | OTS2 (OVERLY TOLERANT TO SA... 57 2e-08
AT4G15880.1 | Symbols: ESD4 | ESD4 (EARLY IN SHORT DAYS 4); SUMO... 50 2e-06
>AT3G48480.1 | Symbols: | cysteine-type peptidase |
chr3:17957326-17959062 REVERSE
Length = 298
Score = 230 bits (587), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/252 (46%), Positives = 163/252 (64%), Gaps = 11/252 (4%)
Query: 29 HRSCWKHMFVSLYAHKKKISKRKAEELRRSFELTSKCFLGTFPSRERSKRRIKHKNKIAK 88
HR+CWKH+ +L K + K E+ F+LT+ CF R RS+RRIK K +K
Sbjct: 37 HRTCWKHIAAALSKCGSKPKRTKELEI---FKLTAPCFYDECTRRGRSERRIKCKYLDSK 93
Query: 89 VIKENKRLNSAEFDCYFQSLWKSFPEDKRTSFTYLDSMWFHLYMKAP--FKGKVLTWIKR 146
+ K+LNS F Y + +W+ F ++K+ SF YLD +WF +Y + V +K
Sbjct: 94 L---RKKLNSKAFVGYLEDVWRGFSDEKKNSFVYLDCLWFSMYKSENHNIRSSVFDSVKT 150
Query: 147 KQIFLKKYVLVPIVGWGHWSLLIFCHLGESSESKARTPCMLLLDSLAVADP-RRLEPDIR 205
KQIF KKYV +PIV W HW+LLIFC+ GE +S CML LDSL D +RLEPDIR
Sbjct: 151 KQIFSKKYVFLPIVYWSHWTLLIFCNFGEDLDSDK--TCMLFLDSLQTTDSSQRLEPDIR 208
Query: 206 KFVFDIYRSEGRSENRKLIYQIPLFLPKVPQQRNGEECGKYVLHFINLFVLGAPDDFSIK 265
KFV DIYR+EGR+E+ L+ +IP ++P VPQQ N ECG +VL++I+ F+ AP++F+++
Sbjct: 209 KFVLDIYRAEGRTEDSSLVDEIPFYVPMVPQQTNDVECGSFVLYYIHRFIEDAPENFNVE 268
Query: 266 NYPYFMNQNWFS 277
+ PYF+ ++WFS
Sbjct: 269 DMPYFLKEDWFS 280
>AT4G33620.1 | Symbols: | Ulp1 protease family protein |
chr4:16147692-16152853 FORWARD
Length = 783
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 139 KVLTWIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGE-------------SSESKARTPC 185
+V W K +F K Y+ +PI HWSL+I CH GE E+ R PC
Sbjct: 375 RVQKWTKNVDLFEKDYIFIPINCSFHWSLVIICHPGELVPSHVNFHSFDDEVENPQRVPC 434
Query: 186 MLLLDSLAVADPRRLEPDIRKFVFDIY--RSEGRSENRKLIYQIPLFLPKVPQQRNGEEC 243
+L LDS+ + L ++ + + R E + + + ++PQQ N +C
Sbjct: 435 ILHLDSIKGSHKGGLINIFPSYLREEWKARHENTTNDSSRAPNMQSISLELPQQENSFDC 494
Query: 244 GKYVLHFINLFVLGAPDDFS---IKNYPYFMNQNWF 276
G ++LH+++LFV AP F+ I F+ +NWF
Sbjct: 495 GLFLLHYLDLFVAQAPAKFNPSLISRSANFLTRNWF 530
>AT1G09730.1 | Symbols: | Ulp1 protease family protein |
chr1:3148017-3154236 REVERSE
Length = 984
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 133 KAPFKGKVLTWIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGESS-------ESKARTPC 185
KA F +V W ++ +F K Y+ VP+ HWSL++ CH GE + + + PC
Sbjct: 512 KAAFL-RVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVANRTDLDLDDSKKVPC 570
Query: 186 MLLLDSLAVADPRRLEPDIRKFVFDIYRSEGRSENRKL---IYQIPLFLPKVPQQRNGEE 242
+L +DS+ L+ ++ ++ + ++ + + + + ++PQQ N +
Sbjct: 571 ILHMDSIK-GSHAGLKNLVQTYLCEEWKERHKETSDDISSRFMNLRFVSLELPQQENSFD 629
Query: 243 CGKYVLHFINLFVLGAPDDFS---IKNYPYFMNQNWF 276
CG ++LH++ LF+ AP +FS I N F+ NWF
Sbjct: 630 CGLFLLHYLELFLAEAPLNFSPFKIYNASNFLYLNWF 666
>AT1G60220.1 | Symbols: OTS1, ULP1D | ULP1D (UB-LIKE PROTEASE 1D);
SUMO-specific protease/ cysteine-type peptidase |
chr1:22208332-22211910 FORWARD
Length = 584
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 143 WIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGESSESKARTPCMLLLDSLAVADPRRLEP 202
W K +F K Y+ +PI HWSL+I C + ES +L LDSL + + +
Sbjct: 417 WWKGIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGL---TILHLDSLGLHSRKSIVE 473
Query: 203 DIRKFVFDIYRSEGRSEN-----------RKLIYQIPLFLPKVPQQRNGEECGKYVLHFI 251
++++F+ D + + + + L +I + +VPQQ+N +CG +VL FI
Sbjct: 474 NVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAVVQVPQQKNDFDCGPFVLFFI 533
Query: 252 NLFVLGAPDDFSIKNYPYFMNQNWF 276
F+ AP K+ F ++ WF
Sbjct: 534 KRFIEEAPQRLKRKDLGMF-DKKWF 557
>AT1G10570.1 | Symbols: OTS2, ULP1C | OTS2 (OVERLY TOLERANT TO SALT
2); SUMO-specific protease/ cysteine-type peptidase |
chr1:3487639-3491102 FORWARD
Length = 571
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 30/155 (19%)
Query: 143 WIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGESSESKARTPCMLLLDSLAVADPRRLEP 202
W K +F K Y+ +PI HWSL+I C + ES ++ LDSL L P
Sbjct: 405 WWKGFDLFCKSYIFIPIHEDLHWSLVIICIPDKEDESGL---TIIHLDSLG------LHP 455
Query: 203 DIRKFVFDIYRSEGRSENRKLIYQIPLFLP------------------KVPQQRNGEECG 244
R +F+ + R E L PL LP +VPQQ+N +CG
Sbjct: 456 --RNLIFNNVKRFLREEWNYLNQDAPLDLPISAKVWRDLPNMINEAEVQVPQQKNDFDCG 513
Query: 245 KYVLHFINLFVLGAPDDFSIKNYPYFMNQNWFSLE 279
++L FI F+ AP ++++ +++ WF E
Sbjct: 514 LFLLFFIRRFIEEAPQRLTLQDL-KMIHKKWFKPE 547
>AT1G10570.2 | Symbols: OTS2, ULP1C | OTS2 (OVERLY TOLERANT TO SALT
2); SUMO-specific protease/ cysteine-type peptidase |
chr1:3487639-3491102 FORWARD
Length = 570
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 30/155 (19%)
Query: 143 WIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGESSESKARTPCMLLLDSLAVADPRRLEP 202
W K +F K Y+ +PI HWSL+I C + ES ++ LDSL L P
Sbjct: 404 WWKGFDLFCKSYIFIPIHEDLHWSLVIICIPDKEDESGL---TIIHLDSLG------LHP 454
Query: 203 DIRKFVFDIYRSEGRSENRKLIYQIPLFLP------------------KVPQQRNGEECG 244
R +F+ + R E L PL LP +VPQQ+N +CG
Sbjct: 455 --RNLIFNNVKRFLREEWNYLNQDAPLDLPISAKVWRDLPNMINEAEVQVPQQKNDFDCG 512
Query: 245 KYVLHFINLFVLGAPDDFSIKNYPYFMNQNWFSLE 279
++L FI F+ AP ++++ +++ WF E
Sbjct: 513 LFLLFFIRRFIEEAPQRLTLQDL-KMIHKKWFKPE 546
>AT4G15880.1 | Symbols: ESD4 | ESD4 (EARLY IN SHORT DAYS 4);
SUMO-specific protease/ cysteine-type peptidase |
chr4:9012769-9015797 FORWARD
Length = 489
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 23/122 (18%)
Query: 155 VLVPIVGWGHWSLLIFCHLGESSESKARTPCMLLLDSLAVADPRRLEPDIRKFVFDIYRS 214
+ VPI HW+L + + R +L LDSL DP L + K++
Sbjct: 371 IFVPIHRGVHWTLAVINN---------RESKLLYLDSLNGVDPMILNA-LAKYM------ 414
Query: 215 EGRSENRKLIYQIPL------FLPKVPQQRNGEECGKYVLHFINLFVLGAPDDFSIKNYP 268
G N K +I F+ +PQQ+NG +CG ++L +I+ F G FS ++ P
Sbjct: 415 -GDEANEKSGKKIDANSWDMEFVEDLPQQKNGYDCGMFMLKYIDFFSRGLGLCFSQEHMP 473
Query: 269 YF 270
YF
Sbjct: 474 YF 475