Jatropha Genome Database

JcCB0130221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0130221.10 - phase: 2 /partial
         (375 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33070.1 | Symbols:  | pyruvate decarboxylase, putative | chr...   640   0.0  
AT5G54960.1 | Symbols: PDC2 | PDC2 (pyruvate decarboxylase-2); c...   637   0.0  
AT5G01320.1 | Symbols:  | pyruvate decarboxylase, putative | chr...   630   0.0  
AT5G01330.1 | Symbols: PDC3 | PDC3 (pyruvate decarboxylase-3); c...   622   e-178

>AT4G33070.1 | Symbols:  | pyruvate decarboxylase, putative |
           chr4:15952519-15954676 REVERSE
          Length = 607

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/375 (80%), Positives = 321/375 (85%)

Query: 1   LSNKLGLXXXXXXXXXFLNKAVKPVLVGGPKLRVAKATEAFVELADASGYALAVMPSAKG 60
           LSNK+GL         FLNKAVKPV+VGGPKLRVAKA +AFVELADASGYALA+MPSAKG
Sbjct: 233 LSNKMGLEAAVEATLEFLNKAVKPVMVGGPKLRVAKACDAFVELADASGYALAMMPSAKG 292

Query: 61  FVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQ 120
           FVPEHHPHFIGTYWGAVST FC+EIVESADAY+FAGPIFNDYSSVGYSLLLKKEKAI+VQ
Sbjct: 293 FVPEHHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIVVQ 352

Query: 121 PDRVVIGNGPAFGCVLMKDFXXXXXXXXXXNNTAYENYRRIFVPDGHPLKSDPKEPLRVN 180
           PDR+ + NGP FGC+LM DF          N TAYENY RIFVP+G PLK + +EPLRVN
Sbjct: 353 PDRITVANGPTFGCILMSDFFRELSKRVKRNETAYENYHRIFVPEGKPLKCESREPLRVN 412

Query: 181 ILFQHIQNMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA 240
            +FQHIQ MLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA
Sbjct: 413 TMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA 472

Query: 241 VPEKRVIACIGDGSFQVTAQDISTMLRCGQRTIIFLINNGGYTIEVEIHDGPYNVIKNWN 300
            PEKRV+A IGDGSFQVT QDISTMLR GQ+TIIFLINNGGYTIEVEIHDGPYNVIKNWN
Sbjct: 473 SPEKRVLAFIGDGSFQVTVQDISTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWN 532

Query: 301 YTGLIDAIHNGEGKCWTTKVXXXXXXXXXXXXXXGSKKDCLCFIEVVVHKDDTSKELLEW 360
           YTGL+DAIHNGEG CWT KV                KKDCLCFIEV++HKDDTSKELLEW
Sbjct: 533 YTGLVDAIHNGEGNCWTAKVRYEEELVEAITTATTEKKDCLCFIEVILHKDDTSKELLEW 592

Query: 361 GSRVSAANSRPPNPQ 375
           GSRVSAANSRPPNPQ
Sbjct: 593 GSRVSAANSRPPNPQ 607


>AT5G54960.1 | Symbols: PDC2 | PDC2 (pyruvate decarboxylase-2);
           carboxy-lyase/ catalytic/ magnesium ion binding /
           pyruvate decarboxylase/ thiamin pyrophosphate binding |
           chr5:22310858-22312681 REVERSE
          Length = 607

 Score =  637 bits (1644), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/375 (80%), Positives = 324/375 (86%)

Query: 1   LSNKLGLXXXXXXXXXFLNKAVKPVLVGGPKLRVAKATEAFVELADASGYALAVMPSAKG 60
           +SN++GL         FLNKAVKPVLVGGPK+RVAKA +AFVELADASGY LAVMPSAKG
Sbjct: 233 VSNQIGLDAAVEAAAEFLNKAVKPVLVGGPKMRVAKAADAFVELADASGYGLAVMPSAKG 292

Query: 61  FVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQ 120
            VPEHH HFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQ
Sbjct: 293 QVPEHHKHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQ 352

Query: 121 PDRVVIGNGPAFGCVLMKDFXXXXXXXXXXNNTAYENYRRIFVPDGHPLKSDPKEPLRVN 180
           PDRV IGNGPAFGCVLMKDF          NNT+YENY RI+VP+G PL+ +P E LRVN
Sbjct: 353 PDRVTIGNGPAFGCVLMKDFLSELAKRIKHNNTSYENYHRIYVPEGKPLRDNPNESLRVN 412

Query: 181 ILFQHIQNMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA 240
           +LFQHIQNMLSSE+AV+AETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGATLGYAQA
Sbjct: 413 VLFQHIQNMLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQA 472

Query: 241 VPEKRVIACIGDGSFQVTAQDISTMLRCGQRTIIFLINNGGYTIEVEIHDGPYNVIKNWN 300
           +P +RVIACIGDGSFQVTAQD+STM+RCGQ+TIIFLINNGGYTIEVEIHDGPYNVIKNWN
Sbjct: 473 MPNRRVIACIGDGSFQVTAQDVSTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWN 532

Query: 301 YTGLIDAIHNGEGKCWTTKVXXXXXXXXXXXXXXGSKKDCLCFIEVVVHKDDTSKELLEW 360
           YT  ++AIHNGEGKCWT KV                +K+  CFIEV+VHKDDTSKELLEW
Sbjct: 533 YTAFVEAIHNGEGKCWTAKVRCEEELVKAINTATNEEKESFCFIEVIVHKDDTSKELLEW 592

Query: 361 GSRVSAANSRPPNPQ 375
           GSRVSAANSRPPNPQ
Sbjct: 593 GSRVSAANSRPPNPQ 607


>AT5G01320.1 | Symbols:  | pyruvate decarboxylase, putative |
           chr5:129484-131625 REVERSE
          Length = 603

 Score =  630 bits (1626), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/375 (80%), Positives = 317/375 (84%)

Query: 1   LSNKLGLXXXXXXXXXFLNKAVKPVLVGGPKLRVAKATEAFVELADASGYALAVMPSAKG 60
           +SN +GL         FLNKAVKPV+VGGPKLRVAKA+EAF+ELADASGY LAVMPS KG
Sbjct: 229 MSNTMGLEAAVEATLEFLNKAVKPVMVGGPKLRVAKASEAFLELADASGYPLAVMPSTKG 288

Query: 61  FVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQ 120
            VPE+HPHFIGTYWGAVST FC+EIVESADAY+FAGPIFNDYSSVGYSLLLKKEKAIIV 
Sbjct: 289 LVPENHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIIVH 348

Query: 121 PDRVVIGNGPAFGCVLMKDFXXXXXXXXXXNNTAYENYRRIFVPDGHPLKSDPKEPLRVN 180
           PDRVV+ NGP FGCVLM DF          N TAYENY RIFVP+G PLK  P EPLRVN
Sbjct: 349 PDRVVVANGPTFGCVLMSDFFRELAKRVKRNETAYENYERIFVPEGKPLKCKPGEPLRVN 408

Query: 181 ILFQHIQNMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA 240
            +FQHIQ MLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA
Sbjct: 409 AMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA 468

Query: 241 VPEKRVIACIGDGSFQVTAQDISTMLRCGQRTIIFLINNGGYTIEVEIHDGPYNVIKNWN 300
            PEKRV++ IGDGSFQVTAQDISTM+R GQ+ IIFLINNGGYTIEVEIHDGPYNVIKNWN
Sbjct: 469 TPEKRVLSFIGDGSFQVTAQDISTMIRNGQKAIIFLINNGGYTIEVEIHDGPYNVIKNWN 528

Query: 301 YTGLIDAIHNGEGKCWTTKVXXXXXXXXXXXXXXGSKKDCLCFIEVVVHKDDTSKELLEW 360
           YTGL+DAIHNGEGKCWTTKV                KKD LCFIEV+VHKDDTSKELLEW
Sbjct: 529 YTGLVDAIHNGEGKCWTTKVRYEEELVEAIKTATTEKKDSLCFIEVIVHKDDTSKELLEW 588

Query: 361 GSRVSAANSRPPNPQ 375
           GSRVSAAN RPPNPQ
Sbjct: 589 GSRVSAANGRPPNPQ 603


>AT5G01330.1 | Symbols: PDC3 | PDC3 (pyruvate decarboxylase-3);
           carboxy-lyase/ catalytic/ magnesium ion binding /
           pyruvate decarboxylase/ thiamin pyrophosphate binding /
           transferase | chr5:132538-134807 REVERSE
          Length = 592

 Score =  622 bits (1604), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 297/375 (79%), Positives = 317/375 (84%)

Query: 1   LSNKLGLXXXXXXXXXFLNKAVKPVLVGGPKLRVAKATEAFVELADASGYALAVMPSAKG 60
           LSNK  L         FLNKAVKPV+VGGPKLRVAKA +AFVELADASGY +AVMPSAKG
Sbjct: 218 LSNKDCLEAAVEATLEFLNKAVKPVMVGGPKLRVAKARDAFVELADASGYPVAVMPSAKG 277

Query: 61  FVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQ 120
           FVPE+HPHFIGTYWGAVST FC+EIVESADAY+FAGPIFNDYSSVGYSLLLKKEKAIIV 
Sbjct: 278 FVPENHPHFIGTYWGAVSTLFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIIVH 337

Query: 121 PDRVVIGNGPAFGCVLMKDFXXXXXXXXXXNNTAYENYRRIFVPDGHPLKSDPKEPLRVN 180
           PD VV+ NGP FGCV M +F          N TAYENY RIFVP+G PLK  P+EPLR+N
Sbjct: 338 PDSVVVANGPTFGCVRMSEFFRELAKRVKPNKTAYENYHRIFVPEGKPLKCKPREPLRIN 397

Query: 181 ILFQHIQNMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA 240
            +FQHIQ MLS+ETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA
Sbjct: 398 AMFQHIQKMLSNETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQA 457

Query: 241 VPEKRVIACIGDGSFQVTAQDISTMLRCGQRTIIFLINNGGYTIEVEIHDGPYNVIKNWN 300
            PEKRV++ IGDGSFQVTAQD+STM+R GQ+TIIFLINNGGYTIEVEIHDGPYNVIKNWN
Sbjct: 458 TPEKRVLSFIGDGSFQVTAQDVSTMIRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWN 517

Query: 301 YTGLIDAIHNGEGKCWTTKVXXXXXXXXXXXXXXGSKKDCLCFIEVVVHKDDTSKELLEW 360
           YTGL+DAIHNGEGKCWTTKV                KKD LCFIEV+VHKDDTSKELLEW
Sbjct: 518 YTGLVDAIHNGEGKCWTTKVRYEEELVEAINTATLEKKDSLCFIEVIVHKDDTSKELLEW 577

Query: 361 GSRVSAANSRPPNPQ 375
           GSRVSAAN RPPNPQ
Sbjct: 578 GSRVSAANGRPPNPQ 592