Jatropha Genome Database
- JcCB0129341.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0129341.10 - phase: 0
(727 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 215 8e-56
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 215 9e-56
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPON... 212 6e-55
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 209 5e-54
AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6); tr... 138 2e-32
AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6); tr... 138 2e-32
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS); transc... 137 3e-32
AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE FACTO... 131 2e-30
AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONSE FACTOR 8); tr... 101 2e-21
AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4); tr... 88 2e-17
AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 87 5e-17
AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 87 5e-17
AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 87 5e-17
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 86 1e-16
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 86 1e-16
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 86 1e-16
AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 82 1e-15
AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 82 1e-15
AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 82 1e-15
AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 80 4e-15
AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 80 4e-15
AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);... 79 8e-15
AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);... 72 1e-12
AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);... 70 4e-12
AT1G34170.3 | Symbols: | transcription factor | chr1:12443578-1... 70 5e-12
AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);... 69 1e-11
AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);... 69 1e-11
AT1G35520.1 | Symbols: ARF15 | ARF15 (AUXIN RESPONSE FACTOR 15);... 68 2e-11
AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPONSE FACTOR 22);... 65 2e-10
AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUC... 54 3e-07
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 52 1e-06
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 52 1e-06
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 52 1e-06
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 50 4e-06
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1164
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 124/232 (53%), Positives = 147/232 (63%), Gaps = 24/232 (10%)
Query: 496 LQADIRNSVPYGTNVESQLGVPMNSDNVLSEGVIGLGKDLPNNLSSGCMLANCENSKDAP 555
L D RNS+ G NV++ VP D +LS G KDL N LS+ + N ++ +
Sbjct: 942 LDGDSRNSLLGGANVDNGF-VP---DTLLSRGYDSQ-KDLQNMLSNYGGVTNDIGTEMST 996
Query: 556 SSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAPPPQFQRMRTYTKVYCFGLLNAICTL 615
S++ +QSFGVP++ S D +ND+ L G W P Q QRMRTYTKV
Sbjct: 997 SAVRTQSFGVPNVPAISNDLAVNDAGVLGGGLW--PAQTQRMRTYTKVQ----------- 1043
Query: 616 ASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVL 675
KRG+VGRSID+ RY YDEL+ DLAR FGIEGQLED Q WKLVYVDHEND+L
Sbjct: 1044 ------KRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDIL 1097
Query: 676 LVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSDNGNV 727
LVGDDPWEEFVNCV+ IKILS EVQQMSLDG+F NQACS D+GN
Sbjct: 1098 LVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQACSGGDSGNA 1149
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 11/66 (16%)
Query: 1 MPWLGDDMYMKDPHS--LPGLSLVQWMNMQQN----PSLANSLQPNYMQSL---SGSVLQ 51
MPWL + + MKDP S PGLSLVQWMNMQQ PS A QP + S+ + ++
Sbjct: 395 MPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLPSAA--AQPGFFPSMLSPTAALHN 452
Query: 52 NLPGAD 57
NL G D
Sbjct: 453 NLGGTD 458
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1165
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 124/232 (53%), Positives = 147/232 (63%), Gaps = 24/232 (10%)
Query: 496 LQADIRNSVPYGTNVESQLGVPMNSDNVLSEGVIGLGKDLPNNLSSGCMLANCENSKDAP 555
L D RNS+ G NV++ VP D +LS G KDL N LS+ + N ++ +
Sbjct: 943 LDGDSRNSLLGGANVDNGF-VP---DTLLSRGYDSQ-KDLQNMLSNYGGVTNDIGTEMST 997
Query: 556 SSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAPPPQFQRMRTYTKVYCFGLLNAICTL 615
S++ +QSFGVP++ S D +ND+ L G W P Q QRMRTYTKV
Sbjct: 998 SAVRTQSFGVPNVPAISNDLAVNDAGVLGGGLW--PAQTQRMRTYTKVQ----------- 1044
Query: 616 ASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVL 675
KRG+VGRSID+ RY YDEL+ DLAR FGIEGQLED Q WKLVYVDHEND+L
Sbjct: 1045 ------KRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDIL 1098
Query: 676 LVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSDNGNV 727
LVGDDPWEEFVNCV+ IKILS EVQQMSLDG+F NQACS D+GN
Sbjct: 1099 LVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQACSGGDSGNA 1150
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 11/66 (16%)
Query: 1 MPWLGDDMYMKDPHS--LPGLSLVQWMNMQQN----PSLANSLQPNYMQSL---SGSVLQ 51
MPWL + + MKDP S PGLSLVQWMNMQQ PS A QP + S+ + ++
Sbjct: 396 MPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLPSAA--AQPGFFPSMLSPTAALHN 453
Query: 52 NLPGAD 57
NL G D
Sbjct: 454 NLGGTD 459
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPONSE
FACTOR 19); DNA binding / transcription factor |
chr1:6628395-6632779 REVERSE
Length = 1086
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 199/395 (50%), Gaps = 69/395 (17%)
Query: 346 AAGAGLSGITE-EVPSCSTSPSTNNCANL-VQPMN--SRVHQNTVLGDDAAQSAATLLSP 401
AAG SG T+ E PSCSTSPS NN + V P N SR Q Q+A+ S
Sbjct: 732 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRNQQQ-------GQAASVSASD 784
Query: 402 NALETMSCSANLVKDLQQKSDVKPSLNIAKNQSQGFFPPQTYLNGATAQADYLDXXXXXX 461
+ E S N V++L K++ + S + +S G + +A D +D
Sbjct: 785 SVFERAS---NPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 836
Query: 462 XVCVSQNDVHLXXXXXXXXXXXXMLLRDTSQDGELQADI-RNSVPYGTNVESQLGVPMNS 520
C DV L DG+ Q+ RN++ + N+E+ P+ S
Sbjct: 837 TYCP---DV-----VGPVQQQQTFPLPSFGFDGDCQSHHPRNNLAFPGNLEAVTSDPLYS 888
Query: 521 DNVLSEGVIGLG---KDLPNNLSSGCMLANCENSKDAPSSMVSQSFGVPDMAFNSIDST- 576
V G +D+ LSS +++ SQSFG+P + F S
Sbjct: 889 QKDFQNLVPNYGNTPRDIETELSS--------------AAISSQSFGIPSIPFKPGCSNE 934
Query: 577 ---INDSSFLNRGP-WAPPPQFQRMRTYTKVYCFGLLNAICTLASMQVYKRGAVGRSIDI 632
INDS +N G W P Q QRMRTYTKV KRG+VGRSID+
Sbjct: 935 VGGINDSGIMNGGGLW--PNQTQRMRTYTKVQ-----------------KRGSVGRSIDV 975
Query: 633 TRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCI 692
TRYS YDEL+ DLAR FGIEGQLED WKLVY DHEND+LLVGDDPWEEFVNCV+ I
Sbjct: 976 TRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNI 1035
Query: 693 KILSPQEVQQMSLDGDFGNSVFPNQACSSSDNGNV 727
KILS EVQQMSLDGD NQACS +D+GN
Sbjct: 1036 KILSSVEVQQMSLDGDLAAIPTTNQACSETDSGNA 1070
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 1 MPWLGDDMYMKDPHS--LPGLSLVQWMNMQQNPSLANSLQPNYMQSLSGSVLQN 52
MPW+G+D MKD S PGLSLVQWM+MQQN L+ S P +LS L N
Sbjct: 394 MPWMGEDFGMKDAQSSMFPGLSLVQWMSMQQNNPLSGSATPQLPSALSSFNLPN 447
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/
transcription regulator | chr5:7016704-7021504 REVERSE
Length = 1150
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/231 (52%), Positives = 146/231 (63%), Gaps = 24/231 (10%)
Query: 496 LQADIRNSVPYGTNVESQLGVPMNSDNVLSEGVIGLGKDLPNNLSSGCMLANCENSKDAP 555
L D RNS+ G NV++ VP D +LS G KDL N LS+ + N ++ +
Sbjct: 943 LDGDSRNSLLGGANVDNGF-VP---DTLLSRGYDSQ-KDLQNMLSNYGGVTNDIGTEMST 997
Query: 556 SSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAPPPQFQRMRTYTKVYCFGLLNAICTL 615
S++ +QSFGVP++ S D +ND+ L G W P Q QRMRTYTKV
Sbjct: 998 SAVRTQSFGVPNVPAISNDLAVNDAGVLGGGLW--PAQTQRMRTYTKVQ----------- 1044
Query: 616 ASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVL 675
KRG+VGRSID+ RY YDEL+ DLAR FGIEGQLED Q WKLVYVDHEND+L
Sbjct: 1045 ------KRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDIL 1098
Query: 676 LVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSDNGN 726
LVGDDPWEEFVNCV+ IKILS EVQQMSLDG+F NQACS + + N
Sbjct: 1099 LVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQACSGATSFN 1149
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 11/66 (16%)
Query: 1 MPWLGDDMYMKDPHS--LPGLSLVQWMNMQQN----PSLANSLQPNYMQSL---SGSVLQ 51
MPWL + + MKDP S PGLSLVQWMNMQQ PS A QP + S+ + ++
Sbjct: 396 MPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLPSAA--AQPGFFPSMLSPTAALHN 453
Query: 52 NLPGAD 57
NL G D
Sbjct: 454 NLGGTD 459
>AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 933
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 74/90 (82%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+ GRS+DI+++S Y EL+ +LAR FG+EGQLED R GW+LV+VD ENDVLL+
Sbjct: 797 VKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLL 856
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSLDG 707
GDDPW EFV+ V CIKILSPQEVQQM G
Sbjct: 857 GDDPWPEFVSSVWCIKILSPQEVQQMGKRG 886
>AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 935
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 74/90 (82%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+ GRS+DI+++S Y EL+ +LAR FG+EGQLED R GW+LV+VD ENDVLL+
Sbjct: 799 VKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLL 858
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSLDG 707
GDDPW EFV+ V CIKILSPQEVQQM G
Sbjct: 859 GDDPWPEFVSSVWCIKILSPQEVQQMGKRG 888
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS);
transcription factor | chr1:6887353-6891182 FORWARD
Length = 902
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 17/112 (15%)
Query: 596 RMRTYTKVYCFGLLNAICTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQL 655
R+RTYTKV K G+VGRSID+T + DY+ELK + FG+EG L
Sbjct: 791 RVRTYTKVQ-----------------KTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLL 833
Query: 656 EDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 707
Q GWKLVYVD+E+DVLLVGDDPWEEFV CVRCI+ILSP EVQQMS +G
Sbjct: 834 THPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 885
>AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE FACTOR
8); transcription factor | chr5:14630151-14634106
FORWARD
Length = 811
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 75/98 (76%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+VGRS+DI+R+S Y EL+++L + F IEG LED R GW+LV+VD END+LL+
Sbjct: 708 VKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLL 767
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFP 715
GDDPWE FVN V IKILSP++V QM G+ +FP
Sbjct: 768 GDDPWESFVNNVWYIKILSPEDVHQMGDHGEGSGGLFP 805
>AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONSE FACTOR 8);
transcription factor | chr5:14630151-14633916 FORWARD
Length = 773
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+VGRS+DI+R+S Y EL+++L + F IEG LED R GW+LV+VD END+LL+
Sbjct: 708 VKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLL 767
Query: 678 GDDPWE 683
GDDPWE
Sbjct: 768 GDDPWE 773
>AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4);
transcription factor | chr5:24308558-24312187 REVERSE
Length = 788
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 67/96 (69%), Gaps = 6/96 (6%)
Query: 612 ICTLASMQVYKRGA-VGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 670
ICT +V+K+G+ VGR+ID++R + YD+L +L R F +EG L D ++ GW+++Y D
Sbjct: 666 ICT----KVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEK-GWRILYTDS 720
Query: 671 ENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLD 706
END+++VGDDPW +F N V I + + +EV+ + D
Sbjct: 721 ENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDD 756
>AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 665
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ AVGR+ID+TR Y++L + L F I+G+L + + W++VY D E+
Sbjct: 544 CTKVHMQ---GSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDDED 599
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSDNGNV 727
D+++VGDDPW EF VR I I +P+EV+++S + + +NGN
Sbjct: 600 DMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 654
>AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 665
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ AVGR+ID+TR Y++L + L F I+G+L + + W++VY D E+
Sbjct: 544 CTKVHMQ---GSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDDED 599
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSDNGNV 727
D+++VGDDPW EF VR I I +P+EV+++S + + +NGN
Sbjct: 600 DMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 654
>AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 662
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ AVGR+ID+TR Y++L + L F I+G+L + + W++VY D E+
Sbjct: 541 CTKVHMQ---GSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK-KWQVVYTDDED 596
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSDNGNV 727
D+++VGDDPW EF VR I I +P+EV+++S + + +NGN
Sbjct: 597 DMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLKADAEENGNT 651
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 619 QVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
+V+K+G A+GRS+D++++ +Y+EL +L R F G+L ++ W +VY D END++LV
Sbjct: 737 KVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEENDMMLV 795
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQM 703
GDDPW+EF VR I I + +EV++M
Sbjct: 796 GDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 619 QVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
+V+K+G A+GRS+D++++ +Y+EL +L R F G+L ++ W +VY D END++LV
Sbjct: 737 KVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEENDMMLV 795
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQM 703
GDDPW+EF VR I I + +EV++M
Sbjct: 796 GDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 619 QVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
+V+K+G A+GRS+D++++ +Y+EL +L R F G+L ++ W +VY D END++LV
Sbjct: 737 KVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKK-DWLIVYTDEENDMMLV 795
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQM 703
GDDPW+EF VR I I + +EV++M
Sbjct: 796 GDDPWQEFCCMVRKIFIYTKEEVRKM 821
>AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 622
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 25/180 (13%)
Query: 539 LSSGCMLANCENSKDAPSSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAP-PPQFQRM 597
++S C L + + S+ + D S+DS I+DS+ + P + P+ Q+
Sbjct: 452 VTSSCRLFGFDLTSKPASATIPH-----DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQ 506
Query: 598 RTYTKVYCFGLLNAICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLE 656
+T T+ + ++V +G AVGR++D+T YDEL ++L + F IEG+L
Sbjct: 507 QTSTR-------------SRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS 553
Query: 657 DRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM---SLDGDFGNSV 713
+ + W +V+ D E D +LVGDDPW EF + + I EV++M SL GD G V
Sbjct: 554 PKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLLGDKGTIV 611
>AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 601
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 25/180 (13%)
Query: 539 LSSGCMLANCENSKDAPSSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAP-PPQFQRM 597
++S C L + + S+ + D S+DS I+DS+ + P + P+ Q+
Sbjct: 431 VTSSCRLFGFDLTSKPASATIPH-----DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQ 485
Query: 598 RTYTKVYCFGLLNAICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLE 656
+T T+ + ++V +G AVGR++D+T YDEL ++L + F IEG+L
Sbjct: 486 QTSTR-------------SRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS 532
Query: 657 DRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM---SLDGDFGNSV 713
+ + W +V+ D E D +LVGDDPW EF + + I EV++M SL GD G V
Sbjct: 533 PKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLLGDKGTIV 590
>AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 514
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 25/180 (13%)
Query: 539 LSSGCMLANCENSKDAPSSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAP-PPQFQRM 597
++S C L + + S+ + D S+DS I+DS+ + P + P+ Q+
Sbjct: 344 VTSSCRLFGFDLTSKPASATIPH-----DKQLISVDSNISDSTTKCQDPNSSNSPKEQKQ 398
Query: 598 RTYTKVYCFGLLNAICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLE 656
+T T+ + ++V +G AVGR++D+T YDEL ++L + F IEG+L
Sbjct: 399 QTSTR-------------SRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS 445
Query: 657 DRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM---SLDGDFGNSV 713
+ + W +V+ D E D +LVGDDPW EF + + I EV++M SL GD G V
Sbjct: 446 PKDK--WAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLLGDKGTIV 503
>AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 638
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 626 VGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEF 685
VGR++D+ Y+EL D+ + F I+G+L R R W++V+ D E D++LVGDDPW EF
Sbjct: 535 VGRAVDLNALKGYNELIDDIEKLFDIKGEL--RSRNQWEIVFTDDEGDMMLVGDDPWPEF 592
Query: 686 VNCVRCIKILSPQEVQQMS 704
N V+ I I S +EV++M+
Sbjct: 593 CNMVKRIFIWSKEEVKKMT 611
>AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 636
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 626 VGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEF 685
VGR++D+ Y+EL D+ + F I+G+L R R W++V+ D E D++LVGDDPW EF
Sbjct: 533 VGRAVDLNALKGYNELIDDIEKLFDIKGEL--RSRNQWEIVFTDDEGDMMLVGDDPWPEF 590
Query: 686 VNCVRCIKILSPQEVQQMS 704
N V+ I I S +EV++M+
Sbjct: 591 CNMVKRIFIWSKEEVKKMT 609
>AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 602
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEE 684
AVGR++D+T YDEL +L F I+GQL R + W +V+ D E D++L GDDPW E
Sbjct: 500 AVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDK--WIVVFTDDEGDMMLAGDDPWNE 557
Query: 685 FVNCVRCIKILSPQEVQQMSL---------DGDFGNSVFPNQA 718
F + I I S EV++M+ + ++GN F N++
Sbjct: 558 FCKMAKKIFIYSSDEVKKMTTKLKISSSLENEEYGNESFENRS 600
>AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);
transcription factor | chr1:13108634-13111700 FORWARD
Length = 605
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ +GR++D++ + YD+L +L + F ++GQL+ R + W++ + ++E
Sbjct: 512 CTKVQMQGV---TIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQ--WEIAFTNNEE 566
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 703
D +LVG+DPW EF N V+ I I S +EV+ +
Sbjct: 567 DKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);
transcription factor | chr1:12577722-12580824 FORWARD
Length = 606
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ +GR++D++ + YD+L +L + F I+GQL+ R + WK+ + D +
Sbjct: 513 CTKVQMQGV---TIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ--WKIAFTDSDG 567
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQ 701
+LVGDDPW EF V+ I I S +EV+
Sbjct: 568 YEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G34170.3 | Symbols: | transcription factor |
chr1:12443578-12446764 REVERSE
Length = 546
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 619 QVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
+V+ +G A+ R++D+T Y++L Q L F ++ +L R R W++V+ ++E +LV
Sbjct: 437 KVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDEL--RTRNQWEIVFTNNEGAEMLV 494
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSD 723
GDDPW EF N + I I S +E+++M L F ++A +SSD
Sbjct: 495 GDDPWPEFCNMAKRIFICSKEEIKKMKLKNKFFQP--ESKALTSSD 538
>AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);
transcription factor | chr1:12927457-12930523 REVERSE
Length = 590
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ +GR++D++ + YD+L +L + F ++GQL+ R + WK+ + D +
Sbjct: 497 CTKVQMQGV---TIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ--WKIAFTDSDG 551
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQ 701
+LVGDDPW EF V+ I I S +EV+
Sbjct: 552 YEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);
transcription factor | chr1:12508548-12511520 REVERSE
Length = 593
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ +GR++D++ + YD+L +L + F I+GQL+ R + W++ + D +
Sbjct: 513 CTKVQMQGV---TIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ--WEIAFTDSDE 567
Query: 673 DVLLVGDDPWEEFVNCVRCIKI 694
D +LVGDDPW EF N V+ I I
Sbjct: 568 DKMLVGDDPWPEFCNMVKKIFI 589
>AT1G35520.1 | Symbols: ARF15 | ARF15 (AUXIN RESPONSE FACTOR 15);
transcription factor | chr1:13082819-13085830 REVERSE
Length = 598
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 562 SFGVPDMAFNSIDSTINDSSFLNRGPWAPPPQFQRMRTYTKVYCFGLLNA-ICTLASMQV 620
S P + + I+ +D S L G Q Q +R+ TK+ + CT MQ
Sbjct: 468 SLATPPVIKDPIEQIGSDISKLTEG--KKFGQSQTLRSPTKIQSKQFSSTRTCTKVQMQG 525
Query: 621 YKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDD 680
+GR++D++ + YD+L +L + F ++GQL+ R + WK+++ + D +LVGDD
Sbjct: 526 V---TIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ--WKIIFTGSDEDEMLVGDD 580
Query: 681 PWEEFVNCVRCIKI 694
PW EF N V+ I I
Sbjct: 581 PWPEFCNMVKRIYI 594
>AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPONSE FACTOR 22);
transcription factor | chr1:12556005-12559082 FORWARD
Length = 598
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ + R++D++ + YD+L +L F ++GQL+ R + W++ + D ++
Sbjct: 511 CTKVQMQGV---TIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQ--WEIAFTDSDD 565
Query: 673 DVLLVGDDPWEEFVNCVRCIKILS 696
D +LVGDDPW EF N V+ I I
Sbjct: 566 DKMLVGDDPWPEFCNMVKKILIFK 589
>AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID
INDUCIBLE 31); transcription factor |
chr3:6020281-6021040 REVERSE
Length = 158
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 618 MQVYKRGA-VGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLL 676
++VY G +GR +D+ +S Y+ L ++L+ F +R R L Y D + D ++
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 677 VGDDPWEEFVNCVRCIKILSPQ 698
VGD PW+ F+ VR +KI P+
Sbjct: 135 VGDIPWDMFLETVRRLKITRPE 156
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRF--------GIEGQLEDRQRI-----GWKLVYVDHE 671
A+GR +D+ +S Y+ L Q L F G+ Q R+ + L Y D E
Sbjct: 140 AIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKE 199
Query: 672 NDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 704
D +LVGD PW F+N V+ ++++ E ++
Sbjct: 200 GDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRF--------GIEGQLEDRQRI-----GWKLVYVDHE 671
A+GR +D+ +S Y+ L Q L F G+ Q R+ + L Y D E
Sbjct: 139 AIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKE 198
Query: 672 NDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 704
D +LVGD PW F+N V+ ++++ E ++
Sbjct: 199 GDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRF--------GIEGQLEDRQRI-----GWKLVYVDHE 671
A+GR +D+ +S Y+ L Q L F G+ Q R+ + L Y D E
Sbjct: 139 AIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKE 198
Query: 672 NDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 704
D +LVGD PW F+N V+ ++++ E ++
Sbjct: 199 GDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 16/91 (17%)
Query: 626 VGRSIDITRYSDYDELKQDLARRF-GI--------EGQLEDRQRIG-------WKLVYVD 669
+GR +D+ Y+ Y++L + + F G+ +GQ E++ IG + L Y D
Sbjct: 163 IGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYED 222
Query: 670 HENDVLLVGDDPWEEFVNCVRCIKILSPQEV 700
+E D +LVGD PW+ FV+ V+ ++++ E+
Sbjct: 223 NEGDKMLVGDVPWQMFVSSVKRLRVIKSSEI 253