Jatropha Genome Database
- JcCB0126391.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0126391.10 - phase: 1 /partial
(593 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46980.2 | Symbols: | unknown protein | chr2:19299868-193034... 129 6e-30
AT2G46980.1 | Symbols: | unknown protein | chr2:19301879-193034... 103 3e-22
>AT2G46980.2 | Symbols: | unknown protein | chr2:19299868-19303429
REVERSE
Length = 793
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 88/117 (75%)
Query: 456 LARVVTLFASALENFKNKMKLATREKSSKILMSVSEDIHQLLQSIELQIQTDAGKLTSIN 515
L R V LFA AL+NF+ K+K A +KSS+I+ SVSE+IH L++I+ I T+AGK +++
Sbjct: 626 LGRAVALFAMALQNFERKLKSAAEKKSSEIIASVSEEIHLELENIKSHIITEAGKTSNLA 685
Query: 516 KAKRKRLETRFQEQEEKLKSIHDKFKQDLHKHRQDCKSTVEELEMHHIELKGTVKKQ 572
K KRK ETR QEQEEK++ IH+KFK D+ H +D KST+EELE + ELKG++KKQ
Sbjct: 686 KTKRKHAETRLQEQEEKMRMIHEKFKDDVSHHLEDFKSTIEELEANQSELKGSIKKQ 742
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 131/271 (48%), Gaps = 19/271 (7%)
Query: 37 TETLRMKLWEILGTVSSPRSQPSHSLAPEACANNLKQEQVHQQKGDGVVKQIQNSDTIET 96
T+ LR KLWEILG S ++ +S PE N K Q D ++K NSD+IET
Sbjct: 193 TDVLRSKLWEILGKASPANNEDVNSETPEVEKTNFKLSQDKGSNDDPLIKPRHNSDSIET 252
Query: 97 DSENPDNTMXXXXXXXXXXXXXXXXIQPKKTKTGQSTLSKLKLQEKSIFSFEDGLHRKGD 156
DSE+P+N KKTK G + K Q S+FSFE+GL K
Sbjct: 253 DSESPENATRRPVTRSLLQRRVGAKGVQKKTKAGANLGRKCTEQVNSVFSFEEGLRGKIG 312
Query: 157 AAISGGSSMSARNKGRRKNYVIEPRKIHFTENNSADEIQKATHRSETPPPS-----AEKA 211
A++ S M + +GRRKN V++ RK H + + AD +K +S TPP S +++
Sbjct: 313 TAVN-SSVMPKKQRGRRKNTVVKCRKAHSRKKDEADWSRKEASKSNTPPRSESTETGKRS 371
Query: 212 SSLSDKMGIKGCSPQSKGTSLEKK-NGNGGDSHSSPKRD-SHMPAGTNRADLQGDFSSPA 269
SS K PQSK + + GD H SP+ + + +P S
Sbjct: 372 SSSDKKGSSHDLHPQSKARKQKPDISTREGDFHPSPEAEAAALPE-----------MSQG 420
Query: 270 ISENEDQQGDVGNPSLKRVMEPQDEFESPTF 300
+S+N D+ N ++ +EP++EF+SPTF
Sbjct: 421 LSKNGDKHERPSNIFREKSVEPENEFQSPTF 451
>AT2G46980.1 | Symbols: | unknown protein | chr2:19301879-19303429
REVERSE
Length = 516
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 19/271 (7%)
Query: 37 TETLRMKLWEILGTVSSPRSQPSHSLAPEACANNLKQEQVHQQKGDGVVKQIQNSDTIET 96
T+ LR KLWEILG S ++ +S PE N K Q D ++K NSD+IET
Sbjct: 193 TDVLRSKLWEILGKASPANNEDVNSETPEVEKTNFKLSQDKGSNDDPLIKPRHNSDSIET 252
Query: 97 DSENPDNTMXXXXXXXXXXXXXXXXIQPKKTKTGQSTLSKLKLQEKSIFSFEDGLHRKGD 156
DSE+P+N KKTK G + K Q S+FSFE+GL K
Sbjct: 253 DSESPENATRRPVTRSLLQRRVGAKGVQKKTKAGANLGRKCTEQVNSVFSFEEGLRGKIG 312
Query: 157 AAISGGSSMSARNKGRRKNYVIEPRKIHFTENNSADEIQKATHRSETPPPS-----AEKA 211
A++ S M + +GRRKN V++ RK H + + AD +K +S TPP S +++
Sbjct: 313 TAVN-SSVMPKKQRGRRKNTVVKCRKAHSRKKDEADWSRKEASKSNTPPRSESTETGKRS 371
Query: 212 SSLSDKMGIKGCSPQSKGTSLEKK-NGNGGDSHSSPKRD-SHMPAGTNRADLQGDFSSPA 269
SS K PQSK + + GD H SP+ + + +P + QG
Sbjct: 372 SSSDKKGSSHDLHPQSKARKQKPDISTREGDFHPSPEAEAAALPEMS-----QG------ 420
Query: 270 ISENEDQQGDVGNPSLKRVMEPQDEFESPTF 300
+S+N D+ N ++ +EP++EF+SPTF
Sbjct: 421 LSKNGDKHERPSNIFREKSVEPENEFQSPTF 451