Jatropha Genome Database

JcCB0125691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125691.10 + phase: 0 /pseudo
         (202 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G60440.1 | Symbols: ATCOAA, ATPANK1 | ATPANK1 (PANTOTHENATE K...   190   6e-49
AT4G32180.3 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...   189   1e-48
AT4G32180.2 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...   189   1e-48
AT4G32180.1 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...   189   1e-48

>AT1G60440.1 | Symbols: ATCOAA, ATPANK1 | ATPANK1 (PANTOTHENATE
           KINASE 1); pantothenate kinase | chr1:22266653-22269070
           REVERSE
          Length = 383

 Score =  190 bits (482), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 100/168 (59%), Positives = 117/168 (69%), Gaps = 15/168 (8%)

Query: 11  VSGSLIKVVYFSRNRDSSVDHKGESSSNDNPGVFNGNRKHTVLKGKLHFAKFETSKINDC 70
           + G+LIK+VYFS N D S + +   S               V+KG+L FAKFET KI+DC
Sbjct: 13  IGGTLIKLVYFSANGDYSEESRNGCS---------------VVKGRLCFAKFETRKIDDC 57

Query: 71  LEFISSKKHHLGGFQHHENPAKDKKFIKATGGGAYKFAELFKEKLGIGLDKEDEMDCLVA 130
           LEFI     H  G Q       DK ++KATGGGA+KFA+LFKEKLGI  DKEDEM  LV 
Sbjct: 58  LEFIRFNILHHSGVQQPNGEGHDKLYVKATGGGAFKFADLFKEKLGILFDKEDEMCSLVG 117

Query: 131 GANFLLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           G NFLLK VPRE +TY+DG K+F++IDHNDLYPYLLVNIGSGVSMIKV
Sbjct: 118 GVNFLLKTVPREAFTYLDGQKKFVEIDHNDLYPYLLVNIGSGVSMIKV 165


>AT4G32180.3 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15538340-15543715 REVERSE
          Length = 783

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/176 (56%), Positives = 129/176 (73%), Gaps = 12/176 (6%)

Query: 11  VSGSLIKVVYFSRNRD-SSVDHKGESSSNDNPGVFNGN-RKHTVLKGKLHFAKFETSKIN 68
           + GSLIK++YFSR+ D S+ D K + +  +  G+ NGN R + VL G+LHF KFET KIN
Sbjct: 84  IGGSLIKLLYFSRHEDYSNDDDKRKRTIKERLGITNGNLRSYPVLGGRLHFVKFETHKIN 143

Query: 69  DCLEFISSKKHHLGGFQHHENPAKDKKF------IKATGGGAYKFAELFKEKLGIGLDKE 122
           +CL+FI SK+ H    +    P   K        IK TGGGA+KFA+LFKE+LG+ ++KE
Sbjct: 144 ECLDFIHSKQLH----RRDPYPWSSKTLPLGTGVIKVTGGGAFKFADLFKERLGVSIEKE 199

Query: 123 DEMDCLVAGANFLLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           DEM CLV+GANFLLKA+  E +T+++G KEF+QID NDLYPYLLVN+GSGVS+IKV
Sbjct: 200 DEMHCLVSGANFLLKAIRHEAFTHMEGEKEFVQIDPNDLYPYLLVNVGSGVSIIKV 255


>AT4G32180.2 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15538340-15543715 REVERSE
          Length = 783

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/176 (56%), Positives = 129/176 (73%), Gaps = 12/176 (6%)

Query: 11  VSGSLIKVVYFSRNRD-SSVDHKGESSSNDNPGVFNGN-RKHTVLKGKLHFAKFETSKIN 68
           + GSLIK++YFSR+ D S+ D K + +  +  G+ NGN R + VL G+LHF KFET KIN
Sbjct: 84  IGGSLIKLLYFSRHEDYSNDDDKRKRTIKERLGITNGNLRSYPVLGGRLHFVKFETHKIN 143

Query: 69  DCLEFISSKKHHLGGFQHHENPAKDKKF------IKATGGGAYKFAELFKEKLGIGLDKE 122
           +CL+FI SK+ H    +    P   K        IK TGGGA+KFA+LFKE+LG+ ++KE
Sbjct: 144 ECLDFIHSKQLH----RRDPYPWSSKTLPLGTGVIKVTGGGAFKFADLFKERLGVSIEKE 199

Query: 123 DEMDCLVAGANFLLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           DEM CLV+GANFLLKA+  E +T+++G KEF+QID NDLYPYLLVN+GSGVS+IKV
Sbjct: 200 DEMHCLVSGANFLLKAIRHEAFTHMEGEKEFVQIDPNDLYPYLLVNVGSGVSIIKV 255


>AT4G32180.1 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15537724-15543715 REVERSE
          Length = 901

 Score =  189 bits (479), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/176 (56%), Positives = 129/176 (73%), Gaps = 12/176 (6%)

Query: 11  VSGSLIKVVYFSRNRD-SSVDHKGESSSNDNPGVFNGN-RKHTVLKGKLHFAKFETSKIN 68
           + GSLIK++YFSR+ D S+ D K + +  +  G+ NGN R + VL G+LHF KFET KIN
Sbjct: 84  IGGSLIKLLYFSRHEDYSNDDDKRKRTIKERLGITNGNLRSYPVLGGRLHFVKFETHKIN 143

Query: 69  DCLEFISSKKHHLGGFQHHENPAKDKKF------IKATGGGAYKFAELFKEKLGIGLDKE 122
           +CL+FI SK+ H    +    P   K        IK TGGGA+KFA+LFKE+LG+ ++KE
Sbjct: 144 ECLDFIHSKQLH----RRDPYPWSSKTLPLGTGVIKVTGGGAFKFADLFKERLGVSIEKE 199

Query: 123 DEMDCLVAGANFLLKAVPREVYTYVDGHKEFLQIDHNDLYPYLLVNIGSGVSMIKV 178
           DEM CLV+GANFLLKA+  E +T+++G KEF+QID NDLYPYLLVN+GSGVS+IKV
Sbjct: 200 DEMHCLVSGANFLLKAIRHEAFTHMEGEKEFVQIDPNDLYPYLLVNVGSGVSIIKV 255