Jatropha Genome Database

JcCB0125511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125511.10 - phase: 0 /pseudo
         (231 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19530.1 | Symbols: ACL5 | ACL5 (ACAULIS 5); spermine synthas...   301   2e-82
AT5G19530.2 | Symbols: ACL5 | ACL5 (ACAULIS 5); spermine synthas...   301   3e-82
AT1G70310.1 | Symbols: SPDS2 | SPDS2 (spermidine synthase 2); sp...   126   1e-29
AT1G23820.2 | Symbols: SPDS1 | SPDS1 (spermidine synthase 1); sp...   120   6e-28
AT1G23820.1 | Symbols: SPDS1 | SPDS1 (spermidine synthase 1); sp...   120   6e-28
AT5G53120.5 | Symbols: SPDS3, SPMS | SPDS3 (SPERMIDINE SYNTHASE ...    91   4e-19
AT5G53120.4 | Symbols: SPDS3, SPMS | SPDS3 (SPERMIDINE SYNTHASE ...    91   4e-19
AT5G53120.3 | Symbols: SPDS3, SPMS | SPDS3 (SPERMIDINE SYNTHASE ...    91   4e-19
AT5G53120.2 | Symbols: SPDS3, SPMS | SPDS3 (SPERMIDINE SYNTHASE ...    91   4e-19
AT5G53120.1 | Symbols: SPDS3, SPMS, ATSPDS3 | SPDS3 (SPERMIDINE ...    91   4e-19

>AT5G19530.1 | Symbols: ACL5 | ACL5 (ACAULIS 5); spermine synthase/
           thermospermine synthase | chr5:6589176-6591091 REVERSE
          Length = 339

 Score =  301 bits (771), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 133/188 (70%), Positives = 165/188 (87%)

Query: 27  WYEEEIEENLRWCFALNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHE 86
           WYEE I+++L+W FALNS+LH G S+YQDIALLDTK FGK LVIDGK+QSAE DEFIYHE
Sbjct: 35  WYEETIDDDLKWSFALNSVLHQGTSEYQDIALLDTKRFGKVLVIDGKMQSAERDEFIYHE 94

Query: 87  SLVHPALLHHSNPKSIFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNR 146
            L+HPALL H NPK++FIMGGGEGS AREIL+H T+EKVVMCDID+EVVDFC+ +L VN 
Sbjct: 95  CLIHPALLFHPNPKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNS 154

Query: 147 EAFCDQRLEIIINDARTELQSRKECYDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLN 206
           +AFC+++LE++I DA+ EL+ R+E +D+I+GDLADP+EGGPCY+LYTKSFY+  +KPKL+
Sbjct: 155 DAFCNKKLELVIKDAKAELEKREEKFDIIVGDLADPVEGGPCYQLYTKSFYQNILKPKLS 214

Query: 207 EAGIFVTQ 214
             GIFVTQ
Sbjct: 215 PNGIFVTQ 222


>AT5G19530.2 | Symbols: ACL5 | ACL5 (ACAULIS 5); spermine synthase/
           thermospermine synthase | chr5:6589176-6591070 REVERSE
          Length = 332

 Score =  301 bits (770), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 133/188 (70%), Positives = 165/188 (87%)

Query: 27  WYEEEIEENLRWCFALNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHE 86
           WYEE I+++L+W FALNS+LH G S+YQDIALLDTK FGK LVIDGK+QSAE DEFIYHE
Sbjct: 28  WYEETIDDDLKWSFALNSVLHQGTSEYQDIALLDTKRFGKVLVIDGKMQSAERDEFIYHE 87

Query: 87  SLVHPALLHHSNPKSIFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNR 146
            L+HPALL H NPK++FIMGGGEGS AREIL+H T+EKVVMCDID+EVVDFC+ +L VN 
Sbjct: 88  CLIHPALLFHPNPKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRRFLTVNS 147

Query: 147 EAFCDQRLEIIINDARTELQSRKECYDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLN 206
           +AFC+++LE++I DA+ EL+ R+E +D+I+GDLADP+EGGPCY+LYTKSFY+  +KPKL+
Sbjct: 148 DAFCNKKLELVIKDAKAELEKREEKFDIIVGDLADPVEGGPCYQLYTKSFYQNILKPKLS 207

Query: 207 EAGIFVTQ 214
             GIFVTQ
Sbjct: 208 PNGIFVTQ 215


>AT1G70310.1 | Symbols: SPDS2 | SPDS2 (spermidine synthase 2);
           spermidine synthase | chr1:26485497-26487352 REVERSE
          Length = 340

 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 5/182 (2%)

Query: 40  FALNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNP 99
             +  IL  G S YQD+ +  +  +GK LV+DG +Q  E DE  Y E + H  L   SNP
Sbjct: 66  LKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISNP 125

Query: 100 KSIFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIIN 159
           K + ++GGG+G   RE+ RH +VE++ +C+ID+ VVD  K Y       + D R+ +II 
Sbjct: 126 KKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYFPNVAVGYEDPRVNLIIG 185

Query: 160 DARTELQSRKE-CYDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIFVTQV-SL 217
           D    L++  E  YD +I D +DPI  GP  +L+ K F+E +V   L   G+  TQ  SL
Sbjct: 186 DGVAFLKNAAEGTYDAVIVDSSDPI--GPAKELFEKPFFE-SVNRALRPGGVVCTQAESL 242

Query: 218 FL 219
           +L
Sbjct: 243 WL 244


>AT1G23820.2 | Symbols: SPDS1 | SPDS1 (spermidine synthase 1);
           spermidine synthase | chr1:8420278-8422480 FORWARD
          Length = 327

 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 102/180 (56%), Gaps = 5/180 (2%)

Query: 42  LNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKS 101
           +  +L  G S YQD+ +  +  +GK LV+DG +Q  E DE  Y E + H  L    NPK 
Sbjct: 108 VEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKK 167

Query: 102 IFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDA 161
           + ++GGG+G   RE+ RH ++E++ MC+ID+ VVD  K +       + D R+ ++I D 
Sbjct: 168 VLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDG 227

Query: 162 RTELQSRKE-CYDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIFVTQV-SLFL 219
              L++  E  YD +I D +DPI  GP  +L+ K F++ +V   L   G+  TQ  SL+L
Sbjct: 228 VAFLKNAAEGSYDAVIVDSSDPI--GPAKELFEKPFFQ-SVARALRPGGVVCTQAESLWL 284


>AT1G23820.1 | Symbols: SPDS1 | SPDS1 (spermidine synthase 1);
           spermidine synthase | chr1:8420278-8422724 FORWARD
          Length = 378

 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 102/180 (56%), Gaps = 5/180 (2%)

Query: 42  LNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKS 101
           +  +L  G S YQD+ +  +  +GK LV+DG +Q  E DE  Y E + H  L    NPK 
Sbjct: 108 VEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKK 167

Query: 102 IFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDA 161
           + ++GGG+G   RE+ RH ++E++ MC+ID+ VVD  K +       + D R+ ++I D 
Sbjct: 168 VLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDG 227

Query: 162 RTELQSRKE-CYDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIFVTQV-SLFL 219
              L++  E  YD +I D +DPI  GP  +L+ K F++ +V   L   G+  TQ  SL+L
Sbjct: 228 VAFLKNAAEGSYDAVIVDSSDPI--GPAKELFEKPFFQ-SVARALRPGGVVCTQAESLWL 284


>AT5G53120.5 | Symbols: SPDS3, SPMS | SPDS3 (SPERMIDINE SYNTHASE 3);
           spermidine synthase/ spermine synthase |
           chr5:21535429-21537653 FORWARD
          Length = 359

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 42  LNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKS 101
           +  +L    S +Q++ + ++  +GK LV+DG +Q  E DE  Y E + H  L   S+PK+
Sbjct: 87  VEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKN 146

Query: 102 IFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDA 161
           + ++GGG+G   REI RH +VE + +C+ID+ V+D  K +       F D R+++ I DA
Sbjct: 147 VLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDA 206

Query: 162 RTELQSRKEC-YDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIF 211
              L+   E  YD II D +DP+  GP   L  K F+E T+   L   G+ 
Sbjct: 207 AEFLRKSPEGKYDAIIVDSSDPV--GPALALVEKPFFE-TLARALKPGGVL 254


>AT5G53120.4 | Symbols: SPDS3, SPMS | SPDS3 (SPERMIDINE SYNTHASE 3);
           spermidine synthase/ spermine synthase |
           chr5:21535429-21537653 FORWARD
          Length = 359

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 42  LNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKS 101
           +  +L    S +Q++ + ++  +GK LV+DG +Q  E DE  Y E + H  L   S+PK+
Sbjct: 87  VEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKN 146

Query: 102 IFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDA 161
           + ++GGG+G   REI RH +VE + +C+ID+ V+D  K +       F D R+++ I DA
Sbjct: 147 VLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDA 206

Query: 162 RTELQSRKEC-YDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIF 211
              L+   E  YD II D +DP+  GP   L  K F+E T+   L   G+ 
Sbjct: 207 AEFLRKSPEGKYDAIIVDSSDPV--GPALALVEKPFFE-TLARALKPGGVL 254


>AT5G53120.3 | Symbols: SPDS3, SPMS | SPDS3 (SPERMIDINE SYNTHASE 3);
           spermidine synthase/ spermine synthase |
           chr5:21535429-21537653 FORWARD
          Length = 359

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 42  LNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKS 101
           +  +L    S +Q++ + ++  +GK LV+DG +Q  E DE  Y E + H  L   S+PK+
Sbjct: 87  VEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKN 146

Query: 102 IFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDA 161
           + ++GGG+G   REI RH +VE + +C+ID+ V+D  K +       F D R+++ I DA
Sbjct: 147 VLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDA 206

Query: 162 RTELQSRKEC-YDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIF 211
              L+   E  YD II D +DP+  GP   L  K F+E T+   L   G+ 
Sbjct: 207 AEFLRKSPEGKYDAIIVDSSDPV--GPALALVEKPFFE-TLARALKPGGVL 254


>AT5G53120.2 | Symbols: SPDS3, SPMS | SPDS3 (SPERMIDINE SYNTHASE 3);
           spermidine synthase/ spermine synthase |
           chr5:21535429-21537653 FORWARD
          Length = 359

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 42  LNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKS 101
           +  +L    S +Q++ + ++  +GK LV+DG +Q  E DE  Y E + H  L   S+PK+
Sbjct: 87  VEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKN 146

Query: 102 IFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDA 161
           + ++GGG+G   REI RH +VE + +C+ID+ V+D  K +       F D R+++ I DA
Sbjct: 147 VLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDA 206

Query: 162 RTELQSRKEC-YDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIF 211
              L+   E  YD II D +DP+  GP   L  K F+E T+   L   G+ 
Sbjct: 207 AEFLRKSPEGKYDAIIVDSSDPV--GPALALVEKPFFE-TLARALKPGGVL 254


>AT5G53120.1 | Symbols: SPDS3, SPMS, ATSPDS3 | SPDS3 (SPERMIDINE
           SYNTHASE 3); spermidine synthase/ spermine synthase |
           chr5:21535429-21537653 FORWARD
          Length = 359

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 42  LNSILHTGASQYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHSNPKS 101
           +  +L    S +Q++ + ++  +GK LV+DG +Q  E DE  Y E + H  L   S+PK+
Sbjct: 87  VEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSISSPKN 146

Query: 102 IFIMGGGEGSTAREILRHRTVEKVVMCDIDEEVVDFCKAYLVVNREAFCDQRLEIIINDA 161
           + ++GGG+G   REI RH +VE + +C+ID+ V+D  K +       F D R+++ I DA
Sbjct: 147 VLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDA 206

Query: 162 RTELQSRKEC-YDLIIGDLADPIEGGPCYKLYTKSFYEFTVKPKLNEAGIF 211
              L+   E  YD II D +DP+  GP   L  K F+E T+   L   G+ 
Sbjct: 207 AEFLRKSPEGKYDAIIVDSSDPV--GPALALVEKPFFE-TLARALKPGGVL 254