Jatropha Genome Database

JcCB0124931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0124931.10 + phase: 0 /pseudo/partial
         (311 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G36280.1 | Symbols:  | adenylosuccinate lyase, putative / ade...   437   e-123
AT4G18440.1 | Symbols:  | adenylosuccinate lyase, putative / ade...   432   e-121

>AT1G36280.1 | Symbols:  | adenylosuccinate lyase, putative /
           adenylosuccinase, putative | chr1:13640600-13642908
           FORWARD
          Length = 527

 Score =  437 bits (1125), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/283 (74%), Positives = 235/283 (83%), Gaps = 10/283 (3%)

Query: 17  LPFRCFPHSWTASPTTLGKEMAVFAVRLSEQRQEISQVKIKGKFAGAVGNYNAHIVAYPN 76
           +P     H   ASPTTLGKEMA+FAVRLS +R+ +S+ KIKGKFAGAVGNYNAHI AY N
Sbjct: 228 VPMLSRTHGQPASPTTLGKEMAIFAVRLSVERRYLSETKIKGKFAGAVGNYNAHISAYSN 287

Query: 77  VNWPLIAKEFVESLGLYFNPYVTQIEPHDYMARLFQAIIVFNNILIDFDRDIWGYISLAY 136
           ++WP +A+EFV SLGL FNPYVTQIEPHDYMARLF  I  FNN+LIDFDRDIW YISL Y
Sbjct: 288 IDWPHVAEEFVTSLGLTFNPYVTQIEPHDYMARLFNTISQFNNVLIDFDRDIWSYISLGY 347

Query: 137 FKQITKAGEIGSSTMPHKVNPIDFENSEGNLGKANGGLSHLSEKLPISRWQE-------- 188
           FKQITKAGEIGSSTMPHKVNPIDFENSEGNLGKAN  L+ LS KLPISR Q         
Sbjct: 348 FKQITKAGEIGSSTMPHKVNPIDFENSEGNLGKANAELAFLSMKLPISRMQRDLTDSTVL 407

Query: 189 --YGEGLGHSLLAYRSALQGIGKLQVNESRLSEDLNHSWEVLAEPIQTVMRRYGVPEPYE 246
              G  LGHSLLAY+SA+QGIGKLQVNE+RL +DL+H+WEVLAEPIQTVMRRYGVPEPYE
Sbjct: 408 RNMGGALGHSLLAYKSAIQGIGKLQVNEARLKDDLDHTWEVLAEPIQTVMRRYGVPEPYE 467

Query: 247 KLKELTRGRAVTKESIREFIEGLELPKETKAYLLELSPHNYVG 289
           KLKELTRGRAV +ESIR+FI+ LELP+E K  LL+L+PH YVG
Sbjct: 468 KLKELTRGRAVNEESIRKFIKSLELPEEAKDQLLKLTPHTYVG 510


>AT4G18440.1 | Symbols:  | adenylosuccinate lyase, putative /
           adenylosuccinase, putative | chr4:10186385-10188832
           REVERSE
          Length = 536

 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/298 (72%), Positives = 239/298 (80%), Gaps = 10/298 (3%)

Query: 17  LPFRCFPHSWTASPTTLGKEMAVFAVRLSEQRQEISQVKIKGKFAGAVGNYNAHIVAYPN 76
           +P     H   A+PTTLGKEMA FAVRLSE+R+ +S+ KIKGKFAGAVGNYNAHI AY N
Sbjct: 237 VPMLSRTHGQPATPTTLGKEMANFAVRLSEERRYLSETKIKGKFAGAVGNYNAHISAYSN 296

Query: 77  VNWPLIAKEFVESLGLYFNPYVTQIEPHDYMARLFQAIIVFNNILIDFDRDIWGYISLAY 136
           ++WP +++EFV SLGL FNPYVTQIEPHDYMARLF  I  FN ILIDFDRDIW YISL Y
Sbjct: 297 IDWPHVSEEFVTSLGLTFNPYVTQIEPHDYMARLFNNISQFNTILIDFDRDIWSYISLGY 356

Query: 137 FKQITKAGEIGSSTMPHKVNPIDFENSEGNLGKANGGLSHLSEKLPISRWQE-------- 188
           FKQ TKAGEIGSSTMPHKVNPIDFENSEGNLGKAN  L+ LS KLPISR Q         
Sbjct: 357 FKQTTKAGEIGSSTMPHKVNPIDFENSEGNLGKANAELTFLSMKLPISRMQRDLTDSTVL 416

Query: 189 --YGEGLGHSLLAYRSALQGIGKLQVNESRLSEDLNHSWEVLAEPIQTVMRRYGVPEPYE 246
              G  LGHSLLAY+SA+QGIGKLQVNE+RL EDL+ +WEVLAEPIQTVMRRYGVPEPYE
Sbjct: 417 RNMGGALGHSLLAYKSAIQGIGKLQVNEARLKEDLDDNWEVLAEPIQTVMRRYGVPEPYE 476

Query: 247 KLKELTRGRAVTKESIREFIEGLELPKETKAYLLELSPHNYVGAAIELGKTVDVTMNL 304
           KLKELTRG+AV +E+IR FI+GLELP E K  LLEL+PH YVGAA  L   VD  ++L
Sbjct: 477 KLKELTRGKAVNEETIRTFIKGLELPSEAKDQLLELTPHTYVGAAAALALAVDEALHL 534