Jatropha Genome Database
- JcCB0124301.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0124301.10 + phase: 0 /partial
(150 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 308 6e-85
AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 299 5e-82
AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid bind... 293 2e-80
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 286 3e-78
AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 285 8e-78
AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana Ind... 282 6e-77
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 276 3e-75
AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana Ind... 276 5e-75
AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Ind... 273 2e-74
AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana I... 272 5e-74
AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana I... 271 9e-74
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 265 7e-72
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 265 1e-71
AT5G60470.1 | Symbols: | nucleic acid binding / transcription f... 243 4e-65
AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 231 1e-61
AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 212 7e-56
AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 209 6e-55
AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 204 2e-53
AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana I... 196 5e-51
AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 140 4e-34
AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 137 2e-33
AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 94 2e-20
AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 94 2e-20
AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 89 1e-18
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 83 6e-17
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 78 2e-15
AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED TRIBUT... 77 3e-15
AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1); transcri... 77 5e-15
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 74 2e-14
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 73 5e-14
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 73 6e-14
>AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 506
Score = 308 bits (790), Expect = 6e-85, Method: Composition-based stats.
Identities = 137/146 (93%), Positives = 143/146 (97%)
Query: 1 PPIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK 60
P +KKKRNLPG PDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK
Sbjct: 38 PLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK 97
Query: 61 LKQRTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAV 120
LKQRT+KE RKRVYVCPEKSCVHHHP+RALGDLTGIKKHFCRKHGEKKWKCEKC+KRYAV
Sbjct: 98 LKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAV 157
Query: 121 QSDWKAHSKTCGTREYKCDCGTLFSR 146
QSDWKAHSKTCGTREY+CDCGT+FSR
Sbjct: 158 QSDWKAHSKTCGTREYRCDCGTIFSR 183
>AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 504
Score = 299 bits (765), Expect = 5e-82, Method: Composition-based stats.
Identities = 135/146 (92%), Positives = 142/146 (97%), Gaps = 2/146 (1%)
Query: 1 PPIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK 60
P +KKKRNLPG +PEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK
Sbjct: 38 PLVKKKRNLPG--NPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK 95
Query: 61 LKQRTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAV 120
LKQRT+KE RKRVYVCPEKSCVHHHP+RALGDLTGIKKHFCRKHGEKKWKCEKC+KRYAV
Sbjct: 96 LKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAV 155
Query: 121 QSDWKAHSKTCGTREYKCDCGTLFSR 146
QSDWKAHSKTCGTREY+CDCGT+FSR
Sbjct: 156 QSDWKAHSKTCGTREYRCDCGTIFSR 181
>AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17773091-17775513 FORWARD
Length = 466
Score = 293 bits (751), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 133/146 (91%), Positives = 140/146 (95%)
Query: 1 PPIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK 60
P +KKKRNLPG PDPEAEVIALSP TLMATNRFLCE+CGKGFQRDQNLQLHRRGHNLPWK
Sbjct: 34 PLVKKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWK 93
Query: 61 LKQRTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAV 120
LKQRT+KE RKRVYVCPEK+CVHHH SRALGDLTGIKKHFCRKHGEKKW CEKC+KRYAV
Sbjct: 94 LKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAV 153
Query: 121 QSDWKAHSKTCGTREYKCDCGTLFSR 146
QSDWKAHSKTCGTREY+CDCGT+FSR
Sbjct: 154 QSDWKAHSKTCGTREYRCDCGTIFSR 179
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26641914-26643883 REVERSE
Length = 500
Score = 286 bits (732), Expect = 3e-78, Method: Composition-based stats.
Identities = 128/143 (89%), Positives = 135/143 (94%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
KKKRNLPG PDP+AEVIALSPKTLMATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct: 32 KKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
Query: 64 RTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSD 123
R+TKE RK+VYVCP CVHH PSRALGDLTGIKKHFCRKHGEKKWKCEKCSK+YAVQSD
Sbjct: 92 RSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSD 151
Query: 124 WKAHSKTCGTREYKCDCGTLFSR 146
WKAHSK CGT+EYKCDCGTLFSR
Sbjct: 152 WKAHSKICGTKEYKCDCGTLFSR 174
>AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-521170 REVERSE
Length = 516
Score = 285 bits (729), Expect = 8e-78, Method: Composition-based stats.
Identities = 119/146 (81%), Positives = 138/146 (94%)
Query: 1 PPIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK 60
PP KK+RN PG P+P+AEV+ALSPKTLMATNRF+C++C KGFQR+QNLQLHRRGHNLPWK
Sbjct: 51 PPPKKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWK 110
Query: 61 LKQRTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAV 120
LKQ++TKE +++VY+CPE +CVHH PSRALGDLTGIKKH+ RKHGEKKWKCEKCSKRYAV
Sbjct: 111 LKQKSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAV 170
Query: 121 QSDWKAHSKTCGTREYKCDCGTLFSR 146
QSDWKAHSKTCGT+EY+CDCGT+FSR
Sbjct: 171 QSDWKAHSKTCGTKEYRCDCGTIFSR 196
>AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana
Indeterminate(ID)-Domain 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18840945-18842829 FORWARD
Length = 452
Score = 282 bits (721), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 125/143 (87%), Positives = 136/143 (95%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
KKKRNLPG PDPE+EVIALSPKTL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct: 34 KKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 93
Query: 64 RTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSD 123
++ KE +K+VYVCPE SCVHH PSRALGDLTGIKKHFCRKHGEKKWKC+KCSK+YAVQSD
Sbjct: 94 KSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 153
Query: 124 WKAHSKTCGTREYKCDCGTLFSR 146
WKAHSK CGT+EYKCDCGTLFSR
Sbjct: 154 WKAHSKICGTKEYKCDCGTLFSR 176
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990070-4992442 FORWARD
Length = 467
Score = 276 bits (707), Expect = 3e-75, Method: Composition-based stats.
Identities = 120/146 (82%), Positives = 137/146 (93%)
Query: 1 PPIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK 60
PP KK+RN PG P+P+AEVIALSPKT+MATNRFLCE+C KGFQR+QNLQLHRRGHNLPWK
Sbjct: 50 PPPKKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWK 109
Query: 61 LKQRTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAV 120
LKQ++ KE R++VY+CPE SCVHH P+RALGDLTGIKKH+ RKHGEKKWKC+KCSKRYAV
Sbjct: 110 LKQKSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAV 169
Query: 121 QSDWKAHSKTCGTREYKCDCGTLFSR 146
QSDWKAHSKTCGT+EY+CDCGT+FSR
Sbjct: 170 QSDWKAHSKTCGTKEYRCDCGTIFSR 195
>AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana
Indeterminate(ID)-Domain 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505523-509154 FORWARD
Length = 602
Score = 276 bits (705), Expect = 5e-75, Method: Composition-based stats.
Identities = 120/143 (83%), Positives = 135/143 (94%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
KKKRN P TP+ +AEVIALSPKTLMATNRF+CE+C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 52 KKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 111
Query: 64 RTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSD 123
++TKE +++VY+CPE SCVHH PSRALGDLTGIKKH+ RKHGEKKWKC+KCSKRYAVQSD
Sbjct: 112 KSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSD 171
Query: 124 WKAHSKTCGTREYKCDCGTLFSR 146
WKAHSKTCGT+EY+CDCGTLFSR
Sbjct: 172 WKAHSKTCGTKEYRCDCGTLFSR 194
>AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana
Indeterminate(ID)-Domain 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20560406-20562625 REVERSE
Length = 455
Score = 273 bits (699), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 124/145 (85%), Positives = 136/145 (93%), Gaps = 1/145 (0%)
Query: 3 IKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLK 62
+K+KRN PG PDPEAEV+ALSPKTLMATNRF+CE+C KGFQRDQNLQLH+RGHNLPWKLK
Sbjct: 62 LKRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLK 121
Query: 63 QRTTKEA-RKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQ 121
QR+ K+ RK+VYVCPE CVHHHPSRALGDLTGIKKHF RKHGEKKWKCEKCSK+YAVQ
Sbjct: 122 QRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQ 181
Query: 122 SDWKAHSKTCGTREYKCDCGTLFSR 146
SDWKAH+KTCGT+EYKCDCGTLFSR
Sbjct: 182 SDWKAHAKTCGTKEYKCDCGTLFSR 206
>AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana
Indeterminate(ID)-Domain 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544941-4547300 FORWARD
Length = 513
Score = 272 bits (696), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 126/144 (87%), Positives = 135/144 (93%), Gaps = 1/144 (0%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
KK+RN PG PDPE+EVIALSPKTLMATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQ
Sbjct: 70 KKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 129
Query: 64 RTTKEA-RKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 122
R+ KE RK+VYVCPE SCVHH PSRALGDLTGIKKHFCRKHGEKKWKC+KCSK+YAVQS
Sbjct: 130 RSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQS 189
Query: 123 DWKAHSKTCGTREYKCDCGTLFSR 146
D KAHSKTCGT+EY+CDCGTLFSR
Sbjct: 190 DCKAHSKTCGTKEYRCDCGTLFSR 213
>AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana
Indeterminate(ID)-Domain 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 271 bits (694), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 124/144 (86%), Positives = 134/144 (93%), Gaps = 1/144 (0%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
KKKR LPG PDP+AEVIALSPKTL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 64 RTTKEA-RKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 122
+ TKE +K+VYVCPE +C HHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSK YAVQS
Sbjct: 113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQS 172
Query: 123 DWKAHSKTCGTREYKCDCGTLFSR 146
DWKAH+K CGTR+Y+CDCGTLFSR
Sbjct: 173 DWKAHTKICGTRDYRCDCGTLFSR 196
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16596850-16598550 REVERSE
Length = 446
Score = 265 bits (677), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 133/144 (92%), Gaps = 1/144 (0%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
K+KRNLPG PDP+AEVIALSP +LM TNRF+CE+C KGF+RDQNLQLHRRGHNLPWKLKQ
Sbjct: 39 KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98
Query: 64 RTTKE-ARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 122
RT KE +K+VY+CPEK+CVHH P+RALGDLTGIKKHF RKHGEKKWKC+KCSK+YAV S
Sbjct: 99 RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMS 158
Query: 123 DWKAHSKTCGTREYKCDCGTLFSR 146
DWKAHSK CGT+EY+CDCGTLFSR
Sbjct: 159 DWKAHSKICGTKEYRCDCGTLFSR 182
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745849-748678 FORWARD
Length = 503
Score = 265 bits (676), Expect = 1e-71, Method: Composition-based stats.
Identities = 122/144 (84%), Positives = 134/144 (93%), Gaps = 1/144 (0%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
KKKRN PGTPDP+A+VIALSP TLMATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 64 RTTKEA-RKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 122
R+ +E +K+VY+CP K+CVHH SRALGDLTGIKKH+ RKHGEKKWKCEKCSK+YAVQS
Sbjct: 113 RSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQS 172
Query: 123 DWKAHSKTCGTREYKCDCGTLFSR 146
DWKAH+KTCGTREYKCDCGTLFSR
Sbjct: 173 DWKAHAKTCGTREYKCDCGTLFSR 196
>AT5G60470.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr5:24320614-24322790
FORWARD
Length = 450
Score = 243 bits (619), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 107/133 (80%), Positives = 123/133 (92%), Gaps = 1/133 (0%)
Query: 15 PEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTTK-EARKRV 73
P AEVI+LSPK+LMATNRF CEIC KGFQR+QNLQLH+RGHNLPWKLKQ+T K + +K+V
Sbjct: 46 PNAEVISLSPKSLMATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKV 105
Query: 74 YVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGT 133
Y+CPEKSCVHH P+RALGDLTGIKKHF RKHGEKKWKC+KCSK+YAV SDWKAH+K CG+
Sbjct: 106 YICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGS 165
Query: 134 REYKCDCGTLFSR 146
RE++CDCGTLFSR
Sbjct: 166 REFRCDCGTLFSR 178
>AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-520619 REVERSE
Length = 439
Score = 231 bits (589), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 114/119 (95%)
Query: 28 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTTKEARKRVYVCPEKSCVHHHPS 87
MATNRF+C++C KGFQR+QNLQLHRRGHNLPWKLKQ++TKE +++VY+CPE +CVHH PS
Sbjct: 1 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 60
Query: 88 RALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSR 146
RALGDLTGIKKH+ RKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGT+EY+CDCGT+FSR
Sbjct: 61 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 119
>AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532484-25534317 FORWARD
Length = 419
Score = 212 bits (540), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 120/145 (82%), Gaps = 2/145 (1%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWK-LK 62
K+KR GTPDPEAEV++LSP+TL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWK LK
Sbjct: 41 KRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 100
Query: 63 QRTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKRYAVQ 121
+ T +E RKRVYVCPE +C+HH+P ALGDL GIKKHF RKH K+W CE+CSK YAVQ
Sbjct: 101 RETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQ 160
Query: 122 SDWKAHSKTCGTREYKCDCGTLFSR 146
SD+KAH KTCGTR + CDCG +FSR
Sbjct: 161 SDYKAHLKTCGTRGHSCDCGRVFSR 185
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 445
Score = 209 bits (531), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 95/145 (65%), Positives = 118/145 (81%), Gaps = 2/145 (1%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
K+KR GTPDP+AEV++LSP+TL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 44 KRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLK 103
Query: 64 RTTK-EARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKRYAVQ 121
R E +KRVYVCPE +C+HH+P ALGDL GIKKHF RKH K+W CE+CSK YAVQ
Sbjct: 104 RDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 163
Query: 122 SDWKAHSKTCGTREYKCDCGTLFSR 146
SD+KAH KTCGTR + CDCG +FSR
Sbjct: 164 SDYKAHLKTCGTRGHSCDCGRVFSR 188
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 446
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 117/146 (80%), Gaps = 3/146 (2%)
Query: 4 KKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 63
K+KR GTPDP+AEV++LSP+TL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 44 KRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLK 103
Query: 64 RTTK-EARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKRYAVQ 121
R E +KRVYVCPE +C+HH+P ALGDL GIKKHF RKH K+W CE+CSK YAVQ
Sbjct: 104 RDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 163
Query: 122 SDWKAHSKTCGTREYKCDCGTLFSRY 147
SD+KAH KTCGTR + CDCG FS +
Sbjct: 164 SDYKAHLKTCGTRGHSCDCG-FFSSF 188
>AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana
Indeterminate(ID)-Domain 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849549-8851520 FORWARD
Length = 362
Score = 196 bits (498), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 117/150 (78%), Gaps = 5/150 (3%)
Query: 2 PIKKKRNLPG--TPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPW 59
PI++ + G DP+AEV++LSP+TL+ ++R++CEIC +GFQRDQNLQ+HRR H +PW
Sbjct: 6 PIRENGDPQGHQLTDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPW 65
Query: 60 KLKQRTTK--EARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHG-EKKWKCEKCSK 116
KL +R K E RKRVYVCPE +C+HH P ALGDL GIKKHF RKH K+W CE+CSK
Sbjct: 66 KLLKRDKKDEEVRKRVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSK 125
Query: 117 RYAVQSDWKAHSKTCGTREYKCDCGTLFSR 146
YAVQSD+KAH KTCG+R + CDCG +FSR
Sbjct: 126 GYAVQSDYKAHLKTCGSRGHSCDCGRVFSR 155
>AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532843-25534317 FORWARD
Length = 333
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Query: 50 LHRRGHNLPWKL-KQRTTKEARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGE-K 107
+HRR H +PWKL K+ T +E RKRVYVCPE +C+HH+P ALGDL GIKKHF RKH K
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 108 KWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSR 146
+W CE+CSK YAVQSD+KAH KTCGTR + CDCG +FSR
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 99
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:433232-434917 FORWARD
Length = 356
Score = 137 bits (345), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Query: 50 LHRRGHNLPWKLKQRTTK-EARKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGE-K 107
+HRR H +PWKL +R E +KRVYVCPE +C+HH+P ALGDL GIKKHF RKH K
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 108 KWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSR 146
+W CE+CSK YAVQSD+KAH KTCGTR + CDCG +FSR
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 99
>AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 94.4 bits (233), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 13 PDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTTKEARKR 72
P E++ L + ++A + C ICGKGF+RD NL++H RGH +K K ++
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 73 V----------YVCPEKSC---VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKC-SKRY 118
V Y CP C H + L + +K H+ R H +K + C +C +K++
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 343
Query: 119 AVQSDWKAHSKTCGTREYKCDCGTLFSR 146
+V +D K H K CG ++ C CGT FSR
Sbjct: 344 SVIADLKTHEKHCGKNKWLCSCGTTFSR 371
>AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 94.4 bits (233), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 13 PDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTTKEARKR 72
P E++ L + ++A + C ICGKGF+RD NL++H RGH +K K ++
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 73 V----------YVCPEKSC---VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKC-SKRY 118
V Y CP C H + L + +K H+ R H +K + C +C +K++
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 343
Query: 119 AVQSDWKAHSKTCGTREYKCDCGTLFSR 146
+V +D K H K CG ++ C CGT FSR
Sbjct: 344 SVIADLKTHEKHCGKNKWLCSCGTTFSR 371
>AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551449-12552501
FORWARD
Length = 350
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 3 IKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLK 62
+++ NLP E++ L + ++A + C ICGKGF+RD NL++H RGH +K
Sbjct: 68 VEEGENLP---PGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTA 124
Query: 63 QRTTKEARKRV----------YVCPEKSC---VHHHPSRALGDLTGIKKHFCRKHGEKKW 109
K ++ V Y CP C H + L + +K H+ R H +K +
Sbjct: 125 AALAKPNKESVPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSF 184
Query: 110 KCEKC-SKRYAVQSDWKAHSKTCGTREYKCDCGTLFSR 146
C +C +K+++V +D K H K CG ++ C CGT FSR
Sbjct: 185 TCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSR 222
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653541-7654662 REVERSE
Length = 373
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 18 EVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTTK---------- 67
+++ L L+A C+ICGKGF+RD NL++H R H +K ++
Sbjct: 202 DILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGY 261
Query: 68 EARKRVYVCPEKSC---VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS-KRYAVQSD 123
+K Y CP+ C H + L + K H+ R H K + C +CS K ++V SD
Sbjct: 262 SLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSD 321
Query: 124 WKAHSKTCGTREYKCDCGTLFSR 146
+ H K CG ++ C CGT FSR
Sbjct: 322 LRTHEKHCGDIKWVCSCGTKFSR 344
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610680-2613180 REVERSE
Length = 337
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 32 RFLCEICGKGFQRDQNLQLHRRGHNLPWK-----LKQRTTKEARKRV--YVCPE--KSCV 82
+F C IC K F R N+Q+H GH ++ LK A R+ Y C E K+ +
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNI 238
Query: 83 HHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGT 142
+H S+ L D ++ H+ RKHG K + C KC K AV+ DW+ H K CG Y C CG+
Sbjct: 239 NHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWY-CTCGS 297
Query: 143 LF 144
F
Sbjct: 298 DF 299
>AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED
TRIBUTARIES 5); transcription factor |
chr1:4550366-4551527 REVERSE
Length = 302
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 1 PPIKKKRNLPGTPDPEAEV-------IALSPKTLMATNRFLCEICGKGFQRDQNLQLHRR 53
PP K L G + E I + L+ +F C +C K F R N+Q+H
Sbjct: 62 PPSSDKETLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMW 121
Query: 54 GHNL-----PWKLKQRTTKEARKRV--YVCPE--KSCVHHHPSRALGDLTGIKKHFCRKH 104
GH P L+ + + R+ Y C E K+ + H S+ L D ++ H+ RKH
Sbjct: 122 GHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKH 181
Query: 105 GEKKWKC-EKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLF 144
G K ++C +KC K +AV+ DW+ H K CG + + C CG+ F
Sbjct: 182 GAKPFRCRKKCEKTFAVRGDWRTHEKNCG-KLWFCVCGSDF 221
>AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1);
transcription factor | chr1:12763953-12765489 FORWARD
Length = 303
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 16 EAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTTKEARKRVYV 75
+A I + L+ F C +C K F R NLQ+H GH ++ + K + R +
Sbjct: 128 KAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAML 187
Query: 76 -----CPEKSCVHH--HP-SRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAH 127
C + C +H HP S+ L D ++ H+ RKHG K + C C K AV+ DW+ H
Sbjct: 188 GIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTH 247
Query: 128 SKTCGTREYKCDCGTLF 144
K CG R + C CG+ F
Sbjct: 248 EKNCGKR-WVCVCGSDF 263
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313759-7315792 REVERSE
Length = 412
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 20 IALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTTKEARKRV------ 73
I + LM +F C +C K F R N+Q+H GH ++ + + +
Sbjct: 243 IPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPC 302
Query: 74 YVCPE--KSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC 131
Y C K+ + H +R L D ++ H+ RKHG + + C +C K +AV+ DW+ H K C
Sbjct: 303 YCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNC 362
Query: 132 GTREYKCDCGTLF 144
G Y C CG+ F
Sbjct: 363 GKLWY-CSCGSDF 374
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18989925-18992034 REVERSE
Length = 337
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 20 IALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNL-----PWKLK-QRTTKEARKRV 73
I + L+ +F C +C K F R N+Q+H GH P L+ + T R
Sbjct: 165 IPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 224
Query: 74 YVCPE--KSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC 131
+ C K+ + H ++ L D ++ H+ RKHG K + C C K +AV+ DW+ H K C
Sbjct: 225 FCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNC 284
Query: 132 GTREYKCDCGTLF 144
G Y C CG+ F
Sbjct: 285 GKLWY-CSCGSDF 296
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21370936-21373121 FORWARD
Length = 383
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 20 IALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRT------TKEARKRV 73
I + L+ +F C +C K F R N+Q+H GH ++ + T R
Sbjct: 204 IPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 263
Query: 74 YVCPE--KSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC 131
Y C ++ + H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 264 YCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 323
Query: 132 GTREYKCDCGTLF 144
G Y C CG+ F
Sbjct: 324 GKLWY-CICGSDF 335