Jatropha Genome Database

JcCB0124231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0124231.10 - phase: 0 /TE/partial
         (901 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   496   e-140
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   201   2e-51
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    97   7e-20
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    94   3e-19

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  496 bits (1278), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/480 (51%), Positives = 325/480 (67%), Gaps = 5/480 (1%)

Query: 389 AFLAQLTIQVEPTSYDQAVLHPHWQKAMDLELQTLERNHTGSLVSLPAGHKPIGCRWVYK 448
           +FL  +    EP++Y++A     W  AMD E+  +E  HT  + +LP   KPIGC+WVYK
Sbjct: 75  SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134

Query: 449 IKYNSDGSIKRYKARLVAKGYTQVEGIDXRETFSPTAKLTTPRCLLTVAAARGWFTHQLD 508
           IKYNSDG+I+RYKARLVAKGYTQ EGID  ETFSP  KLT+ + +L ++A   +  HQLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194

Query: 509 VQNAFLHGDLHEVVYM-IPPPRLRQQGE----NTVCRLHKSLYGLKQASRNWFSTFSIAI 563
           + NAFL+GDL E +YM +PP    +QG+    N VC L KS+YGLKQASR WF  FS+ +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254

Query: 564 QQAGYTQSKADYSLFIKVQGTSFTAVLIYVDDILLTGNNLREIHQLKQTLLKRFLIKDLG 623
              G+ QS +D++ F+K+  T F  VL+YVDDI++  NN   + +LK  L   F ++DLG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314

Query: 624 NLKYFLGIEFSRSQQGIFMSQRKYALDILQDTGLLGAKPEAFPMEQQLKLTSTDGEILHN 683
            LKYFLG+E +RS  GI + QRKYALD+L +TGLLG KP + PM+  +  ++  G    +
Sbjct: 315 PLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVD 374

Query: 684 PTKFRRLVGRLIYLTVTRPEIVYAVRTLSQFMGEPRLPHWNAALRLLRYIKGTPGQGLLL 743
              +RRL+GRL+YL +TR +I +AV  LSQF   PRL H  A +++L YIKGT GQGL  
Sbjct: 375 AKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFY 434

Query: 744 PSTNNLELKAYCDSDWAGCRMTRRSISGYCVFLGTSMIXWKSKKXTNVSRSSAEAEYRAM 803
            S   ++L+ + D+ +  C+ TRRS +GYC+FLGTS+I WKSKK   VS+SSAEAEYRA+
Sbjct: 435 SSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494

Query: 804 TNACLEITWLQYILRNLGVKIMKSAKLFCDNQATLHIAANPVFHECTKHIKIDCHIVREK 863
           + A  E+ WL    R L + + K   LFCDN A +HIA N VFHE TKHI+ DCH VRE+
Sbjct: 495 SFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  201 bits (511), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/224 (45%), Positives = 143/224 (63%), Gaps = 1/224 (0%)

Query: 589 VLIYVDDILLTGNNLREIHQLKQTLLKRFLIKDLGNLKYFLGIEFSRSQQGIFMSQRKYA 648
           +L+YVDDILLTG++   ++ L   L   F +KDLG + YFLGI+      G+F+SQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 649 LDILQDTGLLGAKPEAFPMEQQLKLTSTDGEILHNPTKFRRLVGRLIYLTVTRPEIVYAV 708
             IL + G+L  KP + P+  +L  +S       +P+ FR +VG L YLT+TRP+I YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 121

Query: 709 RTLSQFMGEPRLPHWNAALRLLRYIKGTPGQGLLLPSTNNLELKAYCDSDWAGCRMTRRS 768
             + Q M EP L  ++   R+LRY+KGT   GL +   + L ++A+CDSDWAGC  TRRS
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181

Query: 769 ISGYCVFLGTSMIXWKSKKXTNVSRSSAEAEYRAMTNACLEITW 812
            +G+C FLG ++I W +K+   VSRSS E EYRA+     E+TW
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 96.7 bits (239), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 63/103 (61%)

Query: 395 TIQVEPTSYDQAVLHPHWQKAMDLELQTLERNHTGSLVSLPAGHKPIGCRWVYKIKYNSD 454
           TI+ EP S   A+  P W +AM  EL  L RN T  LV  P     +GC+WV+K K +SD
Sbjct: 23  TIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 82

Query: 455 GSIKRYKARLVAKGYTQVEGIDXRETFSPTAKLTTPRCLLTVA 497
           G++ R KARLVAKG+ Q EGI   ET+SP  +  T R +L VA
Sbjct: 83  GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
           chrM:68918-69253 REVERSE
          Length = 111

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 56/79 (70%)

Query: 695 IYLTVTRPEIVYAVRTLSQFMGEPRLPHWNAALRLLRYIKGTPGQGLLLPSTNNLELKAY 754
           +YLT+TRP++ +AV  LSQF    R     A  ++L Y+KGT GQGL   +T++L+LKA+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 755 CDSDWAGCRMTRRSISGYC 773
            DSDWA C  TRRS++G+C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79