Jatropha Genome Database
- JcCB0124191.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0124191.10 - phase: 0
(479 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 476 e-134
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 180 2e-45
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 6e-45
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 168 7e-42
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 2e-40
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 162 6e-40
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 162 6e-40
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 9e-40
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 1e-39
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 3e-39
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 159 3e-39
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 5e-39
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 3e-38
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 3e-38
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 2e-37
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 152 5e-37
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 9e-37
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 6e-36
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 4e-35
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 145 6e-35
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 6e-35
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 2e-34
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 3e-34
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 5e-34
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 2e-33
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 140 3e-33
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 137 2e-32
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 137 2e-32
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 5e-32
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 6e-32
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 6e-32
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 135 6e-32
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 135 8e-32
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 8e-32
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 2e-31
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 133 3e-31
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 132 4e-31
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 5e-31
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 5e-31
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 6e-31
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 131 1e-30
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 130 1e-30
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 3e-30
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 3e-30
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 4e-30
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 4e-30
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 4e-30
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 6e-30
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 1e-29
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 127 2e-29
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 127 2e-29
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 127 2e-29
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 4e-29
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 4e-29
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 4e-29
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 7e-29
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 8e-29
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 124 1e-28
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 3e-28
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 5e-28
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 8e-28
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 1e-27
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 119 5e-27
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 119 5e-27
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 6e-27
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 6e-27
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 6e-27
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 117 2e-26
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 116 2e-26
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 3e-26
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 6e-26
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 7e-25
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 9e-25
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 6e-24
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 107 2e-23
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 107 2e-23
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 104 1e-22
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 103 2e-22
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 102 6e-22
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 101 1e-21
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 97 2e-20
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 97 3e-20
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 97 3e-20
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 97 3e-20
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 6e-20
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 95 8e-20
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 94 2e-19
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 5e-19
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 92 8e-19
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 87 3e-17
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 86 5e-17
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 6e-17
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 85 9e-17
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 85 1e-16
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 84 2e-16
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 84 3e-16
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 82 6e-16
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 82 6e-16
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 2e-15
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 80 2e-15
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 79 9e-15
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 77 2e-14
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 75 1e-13
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 74 2e-13
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 72 1e-12
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G60770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT1G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 69 6e-12
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 69 6e-12
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 7e-12
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 69 1e-11
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 2e-11
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 67 2e-11
AT1G07590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 66 6e-11
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 8e-11
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 65 8e-11
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 8e-11
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 65 1e-10
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G02490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 63 4e-10
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 62 8e-10
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G80270.3 | Symbols: | DNA-binding protein, putative | chr1:3... 60 4e-09
AT1G80270.2 | Symbols: | DNA-binding protein, putative | chr1:3... 60 4e-09
AT1G80270.1 | Symbols: | DNA-binding protein, putative | chr1:3... 60 4e-09
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 5e-09
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 59 6e-09
AT2G30780.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT1G03100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT5G36300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 1e-08
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 58 1e-08
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 58 1e-08
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G28340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G28380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT5G27460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 57 4e-08
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT5G66631.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 5e-08
AT3G56030.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 5e-08
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 56 6e-08
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 56 6e-08
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT5G14350.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 1e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT4G14190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G06270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G68980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G01970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 53 4e-07
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 6e-07
AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 6e-07
AT5G27300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 6e-07
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT5G27300.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 7e-07
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 52 1e-06
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT2G20710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 51 2e-06
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |... 50 3e-06
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 3e-06
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 50 3e-06
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 4e-06
AT1G15480.1 | Symbols: | DNA binding | chr1:5318307-5320422 FOR... 50 4e-06
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 49 5e-06
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT2G20710.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 1e-05
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/495 (48%), Positives = 344/495 (69%), Gaps = 20/495 (4%)
Query: 1 MATSIVKHFFLSP---PKP---IKAYHLYSSASTPPSDQSHIVSTVVSLLIHHRSKSRWT 54
M+TSI++ L P PKP + L + +S P ++S VS+L HHRSKSRW+
Sbjct: 1 MSTSILRRI-LDPTRKPKPDAILSISLLTTVSSPPSPPSDPLISDAVSILTHHRSKSRWS 59
Query: 55 NLRSLLYSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILS 114
LRSL S TP FS+I L L++NPHL+LRFF FT SLC HD +S ST++HILS
Sbjct: 60 TLRSLQPSG--FTPSQFSEITLCLRNNPHLSLRFFLFT-RRYSLCSHDTHSCSTLIHILS 116
Query: 115 RARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELK 174
R+RLK A II+ AL + + +K F L+K+Y +C SAPFVFDLLIKSCL+ K
Sbjct: 117 RSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSK 176
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRD---GDSKV 231
+IDG++ ++R LRSRGI+ QI TCN LI+ V++ +G+ GY ++RE+FGL D ++K
Sbjct: 177 EIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKK 236
Query: 232 ---RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER-FGCVPNLYSYNILMALFCGEGK 287
+++P+ +FN +M+ FYR+GE EM+E +W EME GC PN+YSYN+LM +C G
Sbjct: 237 MIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGL 296
Query: 288 MREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
M EAEK+WEEM+V+G+ D+ AYNT+IGG + ++ KA+E F++M L G+E +T+EH
Sbjct: 297 MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK---RVSEALEIIRNAM 404
L+NGYCK GDVDS ++VY++M +K F + TI L+EGLC+ + RV EA +I+++A+
Sbjct: 357 LVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAV 416
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGND 464
R+ F PSR YELL+KRLCEDG+M+ AL +QA+M GKGF+P + Y AFI+GY +G++
Sbjct: 417 REAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDE 476
Query: 465 QMAATLIMEMSRTQK 479
+ +A L +EM+ + K
Sbjct: 477 ETSALLAIEMAESLK 491
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 229/459 (49%), Gaps = 38/459 (8%)
Query: 24 SSASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTPIHFSQIALQLKSNPH 83
S+ ++ PSD S + ++ L H + L + + TP S + L+ +++
Sbjct: 13 STFASSPSD-SLLADKALTFLKRHPYQ--------LHHLSANFTPEAASNLLLKSQNDQA 63
Query: 84 LALRFF-------FFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLF 136
L L+F FFTL + LH IL++ +L A I+ + ++ L
Sbjct: 64 LILKFLNWANPHQFFTLRCKCITLH----------ILTKFKLYKTA-QILAEDVAAKTLD 112
Query: 137 DCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIR 196
D + V F+ L +TY C S VFDL++KS L ID ++ IV + ++ G P +
Sbjct: 113 DEYASLV--FKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVL 170
Query: 197 TCNLLISCVAKCKGSCA-GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM 255
+ N ++ + K + + +F+E+ + ++ P+V ++N L+ GF G +++
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEML-------ESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIG 315
++++ME GC+PN+ +YN L+ +C K+ + KL M +KGL ++ +YN +I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 316 GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP 375
G + G++++ EM G + VT+ LI GYCK G+ A++++ +ML+ P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 376 EASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
T LI +C+ ++ A+E + + MR CP+ ++Y L+ + G M EA ++
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFL-DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 436 QAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+M GF P + Y+A I G+ G + A ++ +M
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 165/356 (46%), Gaps = 43/356 (12%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
+ C ++ LI +L+KID +++R + +G+ P + + N++I+ G C
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN------GLCR 287
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
G +E+ + ++ D ++N L+ G+ ++G + EM R G P++
Sbjct: 288 E-GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
+Y L+ C G M A + ++MRV+GL + Y T++ GF + G + +A +EM
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 334 ELGGVESNSVTFEHLINGYCKVG-----------------------------------DV 358
G + VT+ LING+C G DV
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
D A+ V ++M++K +P+ T LI+G CE++R EA ++ +R V P +Y
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYTA 525
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
LI C +G +E+AL+L +M KG PD+ Y I G K + A L++++
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 161/327 (49%), Gaps = 23/327 (7%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
LI S + ++ ++E + +R RG+ P RT L+ ++ Y + RE+
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM---- 406
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
+ P V ++N L+ G G+ME V +M+ G P++ SY+ +++ FC
Sbjct: 407 ---NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
+ EA ++ EM KG++ D Y+++I GF + + ++A + ++EM G+ + T+
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
LIN YC GD++ A+ ++ +M++K P+ T +LI GL ++ R EA ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 406 DVSFCPSRKSYEL---------------LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
+ S PS +Y LIK C G M EA ++ M GK +PD
Sbjct: 584 EES-VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 451 YDAFIEGYKKLGNDQMAATLIMEMSRT 477
Y+ I G+ + G+ + A TL EM ++
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 150/336 (44%), Gaps = 58/336 (17%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ LI K++ +I ++ ++ +G+SP + + + ++S G C Y + +
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS------GFCRSYDVDEAL 470
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
R+ K ++PD +++ L+ GF + +++ EM R G P+ ++Y L+
Sbjct: 471 RVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS--------------------- 320
+C EG + +A +L EM KG+ DV Y+ +I G K
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 321 -----------------------------GQIEKAEEFFKEMELGGVESNSVTFEHLING 351
G + +A++ F+ M + + + +I+G
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
+C+ GD+ A +YK+M++ F T+ L++ L ++ +V+E +I + +R
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSE 709
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+ ++ ++L++ +G M+ L + A+MA GF P+
Sbjct: 710 AEQA-KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQ-IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
+ G V +YN ++ +S + I AE FKEM V N T+ LI G+C G+
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYE 417
+D A+ ++ M K P T LI+G C+ +++ + +++R +M P+ SY
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR-SMALKGLEPNLISYN 279
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
++I LC +G+M+E + +M +G+ D Y+ I+GY K GN A + EM R
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 216/436 (49%), Gaps = 16/436 (3%)
Query: 41 VSLLIHHRSKSRWTNLRSLLYSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCL 100
V++ H +S W L L + L + L+++ + L+L FF + +
Sbjct: 57 VNVAHSHLIQSDWDKLNKL---SDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGS- 112
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP 160
H L +++ ++H L++ R A SI++ LV+ + + P K F+ LL +YR+CDS P
Sbjct: 113 HSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV----DLPAKVFDALLYSYRECDSTP 168
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
VFD L K+ LKK + + ++ G P + +CN +S + +RE
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ + ++ P+ ++ N +M G+ R G+++ E+ +MER G SYN L+A
Sbjct: 229 M-------RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C +G + A KL M GL+ +V +NT+I GF ++ ++++A + F EM+ V
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N+VT+ LINGY + GD + A Y+DM+ + + T LI GLC++ + +A + +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ ++ + P+ ++ LI C + +L M G P+ + ++ + + +
Sbjct: 402 KELDKE-NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCR 460
Query: 461 LGNDQMAATLIMEMSR 476
+ A+ ++ EM R
Sbjct: 461 NEDFDGASQVLREMVR 476
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 190 GISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYR 249
GI I T N LI + K + +E+ K L P+ +F+ L+MG
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKEL-------DKENLVPNSSTFSALIMGQCV 425
Query: 250 DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTA 309
+ E++ M R GC PN ++N+L++ FC A ++ EM + + LD
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEME 334
+ + G G+ + ++ +EME
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEME 510
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 205/462 (44%), Gaps = 63/462 (13%)
Query: 52 RWTNLRSLLYSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSL-CLHDLYSYSTIV 110
RW +L + Y L +H LAL+F + + L H +
Sbjct: 31 RWGSLNHMDYRQARLRLVH-----------GKLALKFLKWVVKQPGLETDHIVQLVCITT 79
Query: 111 HILSRARLKVQALSIIK--SALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIK 168
HIL RAR+ A I+K S + + F F L+ TYR C+S P V+D+LI+
Sbjct: 80 HILVRARMYDPARHILKELSLMSGKSSF--------VFGALMTTYRLCNSNPSVYDILIR 131
Query: 169 SCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGD 228
L I S+EI R++ G +P + TCN ++ V K + + +E+
Sbjct: 132 VYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML------ 185
Query: 229 SKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM 288
K ++ PDV +FN L+ +G E + +ME+ G P + +YN ++ +C +G+
Sbjct: 186 -KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 289 REAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
+ A +L + M+ KG+ DV YN +I +S +I K ++M + N VT+ L
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII-------- 400
ING+ G V A + +ML P T LI+G + EAL++
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Query: 401 ---------------RNA-----------MRDVSFCPSRKSYELLIKRLCEDGQMEEALK 434
+NA M+ C R +Y +I LC++G ++EA+
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 435 LQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
L +M+ G +PD+ Y A I G+ K+G + A ++ + R
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 141/288 (48%), Gaps = 8/288 (2%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
+ +IE++ ++S+G+ + T N+LI + + GY + R++ K +
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-------RKRMIH 295
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+ ++N L+ GF +G++ + ++ NEM FG PN ++N L+ EG +EA K+
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ M KGL +Y ++ G K+ + + A F+ M+ GV +T+ +I+G CK
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
G +D A+++ +M + P+ T LI G C+ R A EI+ R V P+
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGI 474
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
Y LI C G ++EA+++ M +G D ++ + K G
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 128/252 (50%), Gaps = 1/252 (0%)
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G E L + SK + PD+ +++ L+ GF + G + +E+ + R G PN Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
+ L+ C G ++EA +++E M ++G D +N ++ K+G++ +AEEF + M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
G+ N+V+F+ LINGY G+ A V+ +M + P T G L++GLC+ + E
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
A + ++ ++ V Y L+ +C+ G + +A+ L +M + PD Y + I
Sbjct: 597 AEKFLK-SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 456 EGYKKLGNDQMA 467
G + G +A
Sbjct: 656 SGLCRKGKTVIA 667
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 146/321 (45%), Gaps = 9/321 (2%)
Query: 157 DSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQ-IRTCNLLISCVAKCKGSCAGY 215
D + LI ++ + + EIV + G+SP I L+ +C C+ C
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC---CRMGCLKE 491
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
I + +G ++ D +FN L+ + G++ EE M G +PN S+
Sbjct: 492 AIRIYEAMILEGHTR-----DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
+ L+ + G+ +A +++EM G Y +++ G K G + +AE+F K +
Sbjct: 547 DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
++V + L+ CK G++ A+ ++ +M+Q+ P++ T LI GLC K +
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 666
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
A+ + A + P++ Y + + + GQ + + + +M G PD+ +A I
Sbjct: 667 AILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 726
Query: 456 EGYKKLGNDQMAATLIMEMSR 476
+GY ++G + L+ EM
Sbjct: 727 DGYSRMGKIEKTNDLLPEMGN 747
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 180/395 (45%), Gaps = 34/395 (8%)
Query: 100 LHDLYSYSTIVHILSRARLKVQALSIIKSA------LVSRCLFDCNNAPVKFFEMLLKTY 153
L D Y+Y++++ L R V A+ K A L ++ ++ C F + + K
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC------FVDGMFKAG 698
Query: 154 R---------QCDSAPFVFDLLIKSCL-----ELKKIDGSIEIVRMLRSRGISPQIRTCN 199
+ Q D+ D++ + + + KI+ + +++ + ++ P + T N
Sbjct: 699 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
+L+ +K K + ++R I + +G + PD + + L++G +E+ ++
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSI--ILNG-----ILPDKLTCHSLVLGICESNMLEIGLKI 811
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
G + Y++N+L++ C G++ A L + M G+ LD + ++ +
Sbjct: 812 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+ + +++ EM G+ S + LING C+VGD+ +A +V ++M+ P
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
++ L + + EA ++R M + P+ S+ L+ C++G + EAL+L+ M
Sbjct: 932 ESAMVRALAKCGKADEATLLLR-FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ G + DL Y+ I G G+ +A L EM
Sbjct: 991 SNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 163/374 (43%), Gaps = 21/374 (5%)
Query: 103 LYSYSTIVHIL---SRARLKVQALSIIKSALVSR--CLFD------CNNAPVKFFEMLLK 151
+ +Y+T++H R + ++ L +KS V C ++ C + + +LL+
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287
Query: 152 TYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
R+ P ++ LI K+ + +++ + S G+SP T N LI
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID------ 341
Query: 210 GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
G F+E + L P S+ L+ G ++ E ++ + M+R G
Sbjct: 342 -GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
+Y ++ C G + EA L EM G+ D+ Y+ +I GF K G+ + A+E
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
+ G+ N + + LI C++G + AI +Y+ M+ + + T +L+ LC+
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
+V+EA E +R D P+ S++ LI G+ +A + +M G P
Sbjct: 521 AGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579
Query: 450 IYDAFIEGYKKLGN 463
Y + ++G K G+
Sbjct: 580 TYGSLLKGLCKGGH 593
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 170/426 (39%), Gaps = 70/426 (16%)
Query: 117 RLKVQALSIIKSALVSRCL-FDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKK 175
R+ + II S L+ C C ++ +E ++ D F F++L+ S + K
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH--FTFNVLVTSLCKAGK 523
Query: 176 IDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI-----------FG- 223
+ + E +R + S GI P + + LI+ + +F E+ +G
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 224 ----------LRDGDS------KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG 267
LR+ + V D +N L+ + G + ++ EM +
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 268 CVPNLYSYNILMALFCGEGKM-------REAEK----------------------LW--- 295
+P+ Y+Y L++ C +GK +EAE W
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 703
Query: 296 ----EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
E+M G D+ N +I G+ + G+IEK + EM N T+ L++G
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM-RDVSFC 410
Y K DV ++ L+Y+ ++ P+ T L+ G+CE + L+I++ + R V
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV- 822
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
R ++ +LI + C +G++ A L M G D DA + + Q + +
Sbjct: 823 -DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 881
Query: 471 IMEMSR 476
+ EMS+
Sbjct: 882 LHEMSK 887
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 137/321 (42%), Gaps = 56/321 (17%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLL 150
+L +Y+ ++H S+ + + + +S +++ L D C + ++ +L
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 151 KTY--RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
K + R + + F++LI C +I+ + ++V+++ S GIS TC+ ++S + +
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM----- 263
+ E+ SK + P+ + L+ G R G+++ V EM
Sbjct: 873 HRFQESRMVLHEM-------SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
Query: 264 ------------------------------ERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+ VP + S+ LM L C G + EA +
Sbjct: 926 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 985
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING-Y 352
L M GL+LD+ +YN +I G G + A E ++EM+ G +N+ T++ LI G
Sbjct: 986 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045
Query: 353 CKVGDVDSAILVYKDMLQKDF 373
+ A ++ KD+L + F
Sbjct: 1046 ARETAFSGADIILKDLLARGF 1066
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 110/277 (39%), Gaps = 36/277 (12%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD+ + N ++ G+ R G++E ++ EM PNL +YNIL+ + + + L
Sbjct: 717 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 776
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ + + G+ D ++++ G +S +E + K GVE + TF LI+ C
Sbjct: 777 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 836
Query: 355 VGDVDSAI-----------------------------------LVYKDMLQKDFRPEAST 379
G+++ A +V +M ++ PE+
Sbjct: 837 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 896
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
LI GLC + A +++ M CP + +++ L + G+ +EA L M
Sbjct: 897 YIGLINGLCRVGDIKTAF-VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
P + + + K GN A L + MS
Sbjct: 956 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 195/402 (48%), Gaps = 36/402 (8%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP 160
H + SY + HIL AR+ A S++K ++S+ DC+ F++L T C
Sbjct: 8 HSVESYCIVAHILFCARMYYDANSVLKEMVLSKA--DCD-----VFDVLWSTRNVCVPGF 60
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
VFD L ++L ++ +I+ ++ + P+ R+CN L+ AK + F++
Sbjct: 61 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120
Query: 221 IFGL-----------------RDGDSKVR-----------LRPDVHSFNDLMMGFYRDGE 252
+ G ++GD + L PD ++N ++ GF + G
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
++ + EM+ C P++ +YN L+ FC GK+ + + EM+ GL+ +V +Y+T
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
++ F K G +++A +F+ +M G+ N T+ LI+ CK+G++ A + +MLQ
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
T LI+GLC+ +R+ EA E+ M P+ SY LI + M+ A
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELF-GKMDTAGVIPNLASYNALIHGFVKAKNMDRA 359
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
L+L ++ G+G +PDL +Y FI G L + A ++ EM
Sbjct: 360 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 401
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 7/278 (2%)
Query: 186 LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
+R G+ P T LI A CK G + F L + +V + +V ++ L+
Sbjct: 261 MRRVGLVPNEYTYTSLID--ANCK-----IGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313
Query: 246 GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
G M+ EE++ +M+ G +PNL SYN L+ F M A +L E++ +G++
Sbjct: 314 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 373
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
D+ Y T I G +IE A+ EM+ G+++NS+ + L++ Y K G+ + +
Sbjct: 374 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 433
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
+M + D T +LI+GLC+ K VS+A++ D + + +I LC+
Sbjct: 434 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 493
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
D Q+E A L +M KG PD Y + ++G K GN
Sbjct: 494 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 531
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 140/302 (46%), Gaps = 9/302 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ LI + +++ + E+ + + G+ P + + N LI K K + E+
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
G ++PD+ + + G ++E + V NEM+ G N Y LM
Sbjct: 367 KGRG-------IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 419
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG-GVES 340
+ G E L +EM+ + + V + +I G K+ + KA ++F + G+++
Sbjct: 420 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 479
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N+ F +I+G CK V++A +++ M+QK P+ + L++G ++ V EAL +
Sbjct: 480 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL-AL 538
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
R+ M ++ +Y L+ L Q+++A +M G+G PD + + ++ + +
Sbjct: 539 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE 598
Query: 461 LG 462
LG
Sbjct: 599 LG 600
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 252 EMEMIEEV---WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
++ M+EE +++M+RF P S N L+ F GK + ++ +++M G R V
Sbjct: 72 DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF 131
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
YN +I K G +E A F+EM+ G+ ++VT+ +I+G+ KVG +D + +++M
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
KD CE P +Y LI C+ G+
Sbjct: 192 --KDM-------------CCE---------------------PDVITYNALINCFCKFGK 215
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
+ L+ +M G G +P++ Y ++ + K G Q A ++M R
Sbjct: 216 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 264
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 130/287 (45%), Gaps = 20/287 (6%)
Query: 89 FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSI--------IKSALVSRCLFD--- 137
F +D + + + +L SY+ ++H +A+ +AL + IK L+ F
Sbjct: 327 LFGKMDTAGV-IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 385
Query: 138 CNNAPVKFFEMLLKTYRQCD--SAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
C+ ++ ++++ ++C + ++ L+ + + + ++ ++ I +
Sbjct: 386 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 445
Query: 196 RTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM 255
T +LI + K K F I + L+ + F ++ G +D ++E
Sbjct: 446 VTFCVLIDGLCKNKLVSKAVDYFNRI------SNDFGLQANAAIFTAMIDGLCKDNQVEA 499
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIG 315
++ +M + G VP+ +Y LM +G + EA L ++M G++LD+ AY +++
Sbjct: 500 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 559
Query: 316 GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI 362
G Q++KA F +EM G+ + V ++ + ++G +D A+
Sbjct: 560 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 606
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 213/469 (45%), Gaps = 69/469 (14%)
Query: 70 HFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSA 129
H + +++K + L L FF + +L S ++H+ ++ A S+I S+
Sbjct: 532 HLIWVLMKIKCDYRLVLDFFDWARSRRD---SNLESLCIVIHLAVASKDLKVAQSLI-SS 587
Query: 130 LVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSR 189
R + ++ V+FF++L+ TY+ S P VFD+ + ++ + + + + +
Sbjct: 588 FWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNY 647
Query: 190 GISPQIRTCNLLISCVAK-CKGSCAGYGIFREI-----------------FGLRDGDSK- 230
G+ + +CN+ ++ ++K C + +FRE F + G K
Sbjct: 648 GLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKE 707
Query: 231 -------VRLR---PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ L+ PDV S++ ++ G+ R GE++ + ++ M+R G PN Y Y ++
Sbjct: 708 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 767
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM------- 333
L C K+ EAE+ + EM +G+ D Y T+I GF K G I A +FF EM
Sbjct: 768 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 827
Query: 334 -------------------ELG---------GVESNSVTFEHLINGYCKVGDVDSAILVY 365
E G G+E +SVTF LINGYCK G + A V+
Sbjct: 828 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 887
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
M+Q P T LI+GLC++ + A E++ + M + P+ +Y ++ LC+
Sbjct: 888 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL-HEMWKIGLQPNIFTYNSIVNGLCK 946
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
G +EEA+KL + G D Y ++ Y K G A ++ EM
Sbjct: 947 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 153/313 (48%), Gaps = 8/313 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
V+ LI + I + + + SR I+P + T +IS + +F E+
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
F L PD +F +L+ G+ + G M+ V N M + GC PN+ +Y L+
Sbjct: 856 FC-------KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 908
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C EG + A +L EM GL+ ++ YN+I+ G KSG IE+A + E E G+ ++
Sbjct: 909 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 968
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+VT+ L++ YCK G++D A + K+ML K +P T +L+ G C + + E +
Sbjct: 969 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG-EKLL 1027
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
N M P+ ++ L+K+ C ++ A + M +G PD K Y+ ++G+ K
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 1087
Query: 462 GNDQMAATLIMEM 474
N + A L EM
Sbjct: 1088 RNMKEAWFLFQEM 1100
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 7/251 (2%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C + LI + +D + E++ + G+ P I T N +++ + K
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS------- 947
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G E L L D ++ LM + + GEM+ +E+ EM G P + ++
Sbjct: 948 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
N+LM FC G + + EKL M KG+ + T +N+++ + ++ A +K+M
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
GV + T+E+L+ G+CK ++ A ++++M K F ST +LI+G ++K+ E
Sbjct: 1068 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 1127
Query: 396 ALEIIRNAMRD 406
A E+ R+
Sbjct: 1128 AREVFDQMRRE 1138
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 7/172 (4%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
++D + EI++ + +G+ P I T N+L++ G C +G+ + L + +
Sbjct: 984 EMDKAQEILKEMLGKGLQPTIVTFNVLMN------GFCL-HGMLEDGEKLLNWMLAKGIA 1036
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+ +FN L+ + ++ ++ +M G P+ +Y L+ C M+EA L
Sbjct: 1037 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 1096
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFE 346
++EM+ KG + V+ Y+ +I GF K + +A E F +M G+ ++ F+
Sbjct: 1097 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 213/469 (45%), Gaps = 69/469 (14%)
Query: 70 HFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSA 129
H + +++K + L L FF + +L S ++H+ ++ A S+I S+
Sbjct: 532 HLIWVLMKIKCDYRLVLDFFDWARSRRD---SNLESLCIVIHLAVASKDLKVAQSLI-SS 587
Query: 130 LVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSR 189
R + ++ V+FF++L+ TY+ S P VFD+ + ++ + + + + +
Sbjct: 588 FWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNY 647
Query: 190 GISPQIRTCNLLISCVAK-CKGSCAGYGIFREI-----------------FGLRDGDSK- 230
G+ + +CN+ ++ ++K C + +FRE F + G K
Sbjct: 648 GLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKE 707
Query: 231 -------VRLR---PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ L+ PDV S++ ++ G+ R GE++ + ++ M+R G PN Y Y ++
Sbjct: 708 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 767
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM------- 333
L C K+ EAE+ + EM +G+ D Y T+I GF K G I A +FF EM
Sbjct: 768 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 827
Query: 334 -------------------ELG---------GVESNSVTFEHLINGYCKVGDVDSAILVY 365
E G G+E +SVTF LINGYCK G + A V+
Sbjct: 828 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 887
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
M+Q P T LI+GLC++ + A E++ + M + P+ +Y ++ LC+
Sbjct: 888 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL-HEMWKIGLQPNIFTYNSIVNGLCK 946
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
G +EEA+KL + G D Y ++ Y K G A ++ EM
Sbjct: 947 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 153/313 (48%), Gaps = 8/313 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
V+ LI + I + + + SR I+P + T +IS + +F E+
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
F L PD +F +L+ G+ + G M+ V N M + GC PN+ +Y L+
Sbjct: 856 FC-------KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 908
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C EG + A +L EM GL+ ++ YN+I+ G KSG IE+A + E E G+ ++
Sbjct: 909 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 968
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+VT+ L++ YCK G++D A + K+ML K +P T +L+ G C + + E +
Sbjct: 969 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG-EKLL 1027
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
N M P+ ++ L+K+ C ++ A + M +G PD K Y+ ++G+ K
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 1087
Query: 462 GNDQMAATLIMEM 474
N + A L EM
Sbjct: 1088 RNMKEAWFLFQEM 1100
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 7/251 (2%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C + LI + +D + E++ + G+ P I T N +++ + K
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS------- 947
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G E L L D ++ LM + + GEM+ +E+ EM G P + ++
Sbjct: 948 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
N+LM FC G + + EKL M KG+ + T +N+++ + ++ A +K+M
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
GV + T+E+L+ G+CK ++ A ++++M K F ST +LI+G ++K+ E
Sbjct: 1068 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 1127
Query: 396 ALEIIRNAMRD 406
A E+ R+
Sbjct: 1128 AREVFDQMRRE 1138
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 7/172 (4%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
++D + EI++ + +G+ P I T N+L++ G C +G+ + L + +
Sbjct: 984 EMDKAQEILKEMLGKGLQPTIVTFNVLMN------GFCL-HGMLEDGEKLLNWMLAKGIA 1036
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+ +FN L+ + ++ ++ +M G P+ +Y L+ C M+EA L
Sbjct: 1037 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 1096
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFE 346
++EM+ KG + V+ Y+ +I GF K + +A E F +M G+ ++ F+
Sbjct: 1097 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 198/386 (51%), Gaps = 21/386 (5%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLL 150
D ++++T++H L R +A++++ +V C D C + LL
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 151 KTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
K Q P +++ +I + K ++ ++ + + ++GI P + T N LI C+
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN- 303
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
YG + + L + ++ P+V +F+ L+ F ++G++ E++++EM +
Sbjct: 304 ------YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
P++++Y+ L+ FC ++ EA+ ++E M K +V YNT+I GF K+ ++++ E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
F+EM G+ N+VT+ LI+G+ + + D+A +V+K M+ P+ T +L++GLC
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+V AL + R P +Y ++I+ +C+ G++E+ L ++ KG +P++
Sbjct: 478 NNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEM 474
Y + G+ + G + A L EM
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREM 562
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 139/296 (46%), Gaps = 8/296 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F L+ + ++ K D I + +++ GIS + T ++LI+C + + ++
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K+ PD+ + N L+ GF + + +M G P+ +++N L+
Sbjct: 144 -------KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
+ EA L + M VKG + D+ Y ++ G K G I+ A K+ME G +E
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
V + +I+ C +V+ A+ ++ +M K RP T LI LC R S+A ++ +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
M + P+ ++ LI ++G++ EA KL +M + +PD+ Y + I G+
Sbjct: 317 -MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 143/290 (49%), Gaps = 11/290 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
K ++ ++K R D F + LI ++D + + ++ S+ P + T N LI
Sbjct: 347 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
K K G +FRE+ S+ L + ++ L+ GF++ E + + V+ +M
Sbjct: 405 GFCKAKRVDEGMELFREM-------SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
G +P++ +Y+IL+ C GK+ A ++E ++ + D+ YN +I G K+G++
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
E + F + L GV+ N VT+ +++G+C+ G + A ++++M ++ P++ T L
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
I + + E+IR MR F + L+ L DG+++++
Sbjct: 578 IRAHLRDGDKAASAELIRE-MRSCRFVGDASTIGLVTNML-HDGRLDKSF 625
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 131/254 (51%), Gaps = 9/254 (3%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ D + FE+++ + C ++ LIK + K++D +E+ R + RG+
Sbjct: 372 CMHDRLDEAKHMFELMIS--KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
T LI + + +F+++ + DG + PD+ +++ L+ G +G++
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQM--VSDG-----VLPDIMTYSILLDGLCNNGKV 482
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
E V+ ++R P++Y+YNI++ C GK+ + L+ + +KG++ +V Y T+
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
+ GF + G E+A+ F+EM+ G +S T+ LI + + GD ++ + ++M F
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 602
Query: 374 RPEASTIGMLIEGL 387
+ASTIG++ L
Sbjct: 603 VGDASTIGLVTNML 616
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 1/245 (0%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K R P + F+ L+ + + +++ + +M+ G NLY+Y+IL+ FC ++
Sbjct: 74 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
A + +M G D+ N+++ GF +I A +M G + +S TF LI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+G + A+ + M+ K +P+ T G+++ GLC++ + AL +++ M
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK-MEQGKI 252
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
P Y +I LC + +AL L +M KG P++ Y++ I G A+
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 470 LIMEM 474
L+ +M
Sbjct: 313 LLSDM 317
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 194/383 (50%), Gaps = 21/383 (5%)
Query: 105 SYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLLKTY 153
+++T++H L +A+++I + C D C LL
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 154 RQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGS 211
Q P +++ +I + K +D ++ + + + ++GI P + T + LISC+
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN---- 303
Query: 212 CAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPN 271
YG + + L + ++ PDV +F+ L+ F ++G++ E++++EM + P+
Sbjct: 304 ---YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 272 LYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
+ +Y+ L+ FC ++ EA++++E M K DV YNT+I GF K ++E+ E F+
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
EM G+ N+VT+ LI G + GD D A ++K+M+ P T L++GLC+
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
++ +A+ + R P+ +Y ++I+ +C+ G++E+ L ++ KG +PD+ Y
Sbjct: 481 KLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 452 DAFIEGYKKLGNDQMAATLIMEM 474
+ I G+ + G+ + A L EM
Sbjct: 540 NTMISGFCRKGSKEEADALFKEM 562
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 134/254 (52%), Gaps = 9/254 (3%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ D + + FE ++ + C ++ LIK + K+++ +E+ R + RG+
Sbjct: 372 CMHDRLDEAKQMFEFMVS--KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
T N+LI + + IF+E+ + DG + P++ ++N L+ G ++G++
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEM--VSDG-----VPPNIMTYNTLLDGLCKNGKL 482
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
E V+ ++R P +Y+YNI++ C GK+ + L+ + +KG++ DV AYNT+
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I GF + G E+A+ FKEM+ G NS + LI + GD +++ + K+M F
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 374 RPEASTIGMLIEGL 387
+ASTIG++ L
Sbjct: 603 AGDASTIGLVTNML 616
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 177/411 (43%), Gaps = 58/411 (14%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSII---------------KSALVSRCLFDCNNAPVKF 145
H+ Y+YS +++ R AL+++ S L C + V
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
+ + T Q ++ F+ LI K ++ ++ + ++G P + T ++++ +
Sbjct: 174 VDQMFVTGYQPNTV--TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
K G F L + + +L P V +N ++ G + M+ ++ EME
Sbjct: 232 CK-------RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
G PN+ +Y+ L++ C G+ +A +L +M + + DV ++ +I F K G++ +
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
AE+ + EM ++ + VT+ LING+C +D A +++ M+ K P+ T LI+
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 386 GLCEKKRVSEALEIIR----------------------------------NAMRDVSFCP 411
G C+ KRV E +E+ R M P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+ +Y L+ LC++G++E+A+ + + EP + Y+ IEG K G
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 140/316 (44%), Gaps = 8/316 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ + +LI ++ ++ ++ + G P I T + L++ G C I E
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN------GYCHSKRI-SE 169
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
L D +P+ +FN L+ G + + + + M GC P+L +Y +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C G A L +M L V YNTII G K ++ A FKEME G+
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N VT+ LI+ C G A + DM+++ P+ T LI+ ++ ++ EA E +
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA-EKL 348
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ M S PS +Y LI C +++EA ++ M K PD+ Y+ I+G+ K
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 461 LGNDQMAATLIMEMSR 476
+ + EMS+
Sbjct: 409 YKRVEEGMEVFREMSQ 424
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K R P + F+ L+ + + +++ + +M+ G N Y+Y+IL+ FC ++
Sbjct: 74 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
A + +M G ++ ++++ G+ S +I +A +M + G + N+VTF LI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+G A+ + M+ K +P+ T G+++ GLC++ A ++ N M
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL-NKMEQGKL 252
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
P Y +I LC+ M++AL L +M KG P++ Y + I G A+
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 470 LIMEM 474
L+ +M
Sbjct: 313 LLSDM 317
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 1/216 (0%)
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
++ EM + P++ ++ L++ K L E+M+ G+ + Y+ +I F
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
+ Q+ A +M G E N VT L+NGYC + A+ + M ++P
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 379 TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAK 438
T LI GL + SEA+ +I + M P +Y +++ LC+ G + A L K
Sbjct: 188 TFNTLIHGLFLHNKASEAMALI-DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 439 MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
M EP + IY+ I+G K + A L EM
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 202/386 (52%), Gaps = 21/386 (5%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNA-PVKFFEML 149
D +++T+VH L + +A+++++ +V C D C P +L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 150 LKTYR-QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
K + + ++ ++ +I S + + +D ++ + + ++GI P + T + LISC+
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN- 287
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
YG + + L + ++ P+V +FN L+ F ++G++ E++++EM +
Sbjct: 288 ------YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
PN+ +YN L+ FC ++ EA++++ M K DV YNT+I GF K+ ++ E
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
F++M G+ N+VT+ LI+G+ + D D+A +V+K M+ P T L++GLC
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ ++ +A+ ++ ++ P +Y ++ + +C+ G++E+ L ++ KG +PD+
Sbjct: 462 KNGKLEKAM-VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEM 474
Y+ I G+ K G + A TL ++M
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKM 546
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 169/379 (44%), Gaps = 30/379 (7%)
Query: 84 LALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPV 143
LA RF + S CL +Y +S + + R +L AL +K + V
Sbjct: 3 LAKRFVHLRKASPSFCLRGIY-FSGLSYDGYREKLSRNALLHLKL-----------DEAV 50
Query: 144 KFFEMLLKTYRQCDSAPFV----FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCN 199
F ++K S PF F L+ + ++KK D I + G+S + T N
Sbjct: 51 DLFGEMVK------SRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
++I+C+ + I ++ L G P + + N L+ GF + +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYG-------PSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
++M G P+ ++ L+ K EA L E M VKG + D+ Y +I G K
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
G+ + A +ME G +E++ V + +I+ CK VD A+ ++ +M K RP+ T
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
LI LC R S+A ++ + M + P+ ++ LI ++G++ EA KL +M
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSD-MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 440 AGKGFEPDLKIYDAFIEGY 458
+ +P++ Y++ I G+
Sbjct: 337 IQRSIDPNIVTYNSLINGF 355
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 134/267 (50%), Gaps = 9/267 (3%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ D + + F +++ + C ++ LI + KK+ +E+ R + RG+
Sbjct: 356 CMHDRLDEAQQIFTLMVS--KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
T LI + +F+++ + DG + P++ ++N L+ G ++G++
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQM--VSDG-----VHPNIMTYNTLLDGLCKNGKL 466
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
E V+ +++ P++Y+YNI+ C GK+ + L+ + +KG++ DV AYNT+
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I GF K G E+A F +M+ G +S T+ LI + + GD ++ + K+M F
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEII 400
+AST G++ + L + + LE++
Sbjct: 587 AGDASTYGLVTDMLHDGRLDKGFLEVL 613
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 35/246 (14%)
Query: 91 FTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLL 150
FTL S CL D+ +Y+T+++ +A+ V + + + +SR N + L+
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD--MSRRGLVGNTVT---YTTLI 422
Query: 151 KTYRQ---CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAK 207
+ Q CD+A VF + + S G+ P I T N L+ + K
Sbjct: 423 HGFFQASDCDNAQMVF--------------------KQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 208 CKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG 267
+F + K ++ PD++++N + G + G++E +++ + G
Sbjct: 463 NGKLEKAMVVFEYL-------QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
P++ +YN +++ FC +G EA L+ +M+ G D YNT+I + G +
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 575
Query: 328 EFFKEM 333
E KEM
Sbjct: 576 ELIKEM 581
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 209/425 (49%), Gaps = 30/425 (7%)
Query: 76 LQLKSNPHLALRFFFFTLDNSSLCLH--DLYSYSTIVHILSRARL--KVQAL-------S 124
L+ +NP LA R F + S H L + TI IL RA++ ++Q L S
Sbjct: 10 LKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSS 69
Query: 125 IIKSAL-----VSRCLFDCNNAPVKF--FEMLLKTYRQCDSAPFVFDLLIKSCLELKKID 177
I K+ L V N+ F F+++ + + + ++++LL++SC++ ++++
Sbjct: 70 IQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVE 129
Query: 178 GSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDV 237
+ + + GI+PQ T NLLI A C SC RE+F D + +P+
Sbjct: 130 FVSWLYKDMVLCGIAPQTYTFNLLIR--ALCDSSCVDAA--RELF---DEMPEKGCKPNE 182
Query: 238 HSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
+F L+ G+ + G + E+ N ME FG +PN YN +++ FC EG+ ++EK+ E+
Sbjct: 183 FTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK 242
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL----GGVESNSVTFEHLINGYC 353
MR +GL D+ +N+ I K G++ A F +MEL G NS+T+ ++ G+C
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
KVG ++ A +++ + + D + + ++GL + EA E + M D PS
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA-ETVLKQMTDKGIGPSI 361
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
SY +L+ LC+ G + +A + M G PD Y + GY +G A +L+ E
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 474 MSRTQ 478
M R
Sbjct: 422 MMRNN 426
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 236/557 (42%), Gaps = 90/557 (16%)
Query: 1 MATSIVKHFFLSPPKPIKAYHLYSSASTPPSDQSHIVS-----TVVSLLIHHRSKSRWTN 55
M S+VK + P A+ ++ + PS++SH +S T+ +L+ +
Sbjct: 1 MEQSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQE 60
Query: 56 LRSLLYST---KTLTPIHFSQIALQLKSN------PHLALRFFFFTLDNSSLCLHDLYSY 106
L +L+ S+ KT S +++ KSN P L F + S+ L++L
Sbjct: 61 LHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLE 120
Query: 107 STI----VHILSRARLKVQALSIIKSA----LVSRCLFD--CNNAPVKFFEMLLKTYRQC 156
S I V +S + I L+ R L D C +A + F+ + + + C
Sbjct: 121 SCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE--KGC 178
Query: 157 DSAPFVFDLLIKS-C--------LEL--------------------------KKIDGSIE 181
F F +L++ C LEL + D S +
Sbjct: 179 KPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK 238
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL-RPDVHSF 240
+V +R G+ P I T N IS + K IF ++ + D + L RP+ ++
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM----ELDEYLGLPRPNSITY 294
Query: 241 NDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV 300
N ++ GF + G +E + ++ + + +L SYNI + GK EAE + ++M
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDS 360
KG+ + +YN ++ G K G + A+ M+ GV ++VT+ L++GYC VG VD+
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 361 AILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLI 420
A + ++M++ + P A T +L+ L + R+SEA E++R M + + + +++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK-MNEKGYGLDTVTCNIIV 473
Query: 421 KRLCEDGQMEEALKLQAKMAGKGFE-----------------------PDLKIYDAFIEG 457
LC G++++A+++ M G PDL Y + G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 458 YKKLGNDQMAATLIMEM 474
K G A L EM
Sbjct: 534 LCKAGRFAEAKNLFAEM 550
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 35/403 (8%)
Query: 103 LYSYSTIVHILSRARLKVQALSII---------KSALVSRCLFD--CNNAPVKFFEMLLK 151
+YSY+ ++ L + + A +I+ A+ CL C+ V + LL+
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 152 TYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA--- 206
+ + P + ++L+ S ++ +I + E++R + +G TCN+++ +
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 207 ------------KCKGSCAGYGIFREIFGLRDGDSKVRLR--PDVHSFNDLMMGFYRDGE 252
+ GS A + GL D DS + PD+ +++ L+ G + G
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD-DSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+ ++ EM P+ +YNI + FC +GK+ A ++ ++M KG + YN+
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I G QI + EM+ G+ N T+ I C+ V+ A + +M+QK+
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS-YELLIKRLCEDGQMEE 431
P + LIE C+ A E+ A VS C ++ Y L+ L GQ+ +
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFETA---VSICGQKEGLYSLMFNELLAAGQLLK 716
Query: 432 ALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
A +L + +GFE +Y +E K ++A+ ++ +M
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 133/302 (44%), Gaps = 38/302 (12%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDS 158
CL DL +YST+++ L +A +A ++ F EM+ + Q DS
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNL-------------------FAEMMGEKL-QPDS 559
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
+++ I + KI + +++ + +G + T N LI G GI
Sbjct: 560 V--AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI----------LGLGIK 607
Query: 219 REIF---GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
+IF GL D + + P++ ++N + ++E + +EM + PN++S+
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Query: 276 NILMALFCGEGKMREAEKLWE-EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
L+ FC A++++E + + G + + Y+ + +GQ+ KA E + +
Sbjct: 668 KYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEAVL 725
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G E + ++ L+ CK +++ A + M+ + + + + + +I+GL +
Sbjct: 726 DRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKK 785
Query: 395 EA 396
EA
Sbjct: 786 EA 787
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 199/410 (48%), Gaps = 46/410 (11%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP 160
+DL S+S ++H+L+ A A +IKS L+ R ++ P L S
Sbjct: 73 NDLQSFSAVIHVLTGAHKYTLARCLIKS-LIER--LKRHSEPSNMSHRLFNALEDIQSPK 129
Query: 161 F---VFDLLI-------------------------KSCLEL-------KKIDGSIEIVRM 185
F VF LLI K+CL + ++ D ++
Sbjct: 130 FSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQL 189
Query: 186 LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
+ SRG+ P + +L C C G++ + L D + + ++P+V+ + ++
Sbjct: 190 MISRGLVPDVHIYFVLFQC-------CFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYIL 242
Query: 246 GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
RD +ME E+++ M++ G +PNLY+Y+ ++ +C G +R+A L++E+ V L
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
+V + T++ GF K+ ++ A F M GV+ N + LI+G+CK G++ A+ +
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
+M + P+ T +LI GLC + +V+EA + + M++ PS +Y LI C+
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK-MKNERIFPSSATYNSLIHGYCK 421
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
+ ME+AL L ++M G EP++ + I+GY + + + A L EM+
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 8/313 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+++ + I K++ + ++ +++ G+ P + T + +I K YG+++E
Sbjct: 235 YIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKE 294
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
I L P+V F L+ GF + E+ ++ M +FG PNLY YN L+
Sbjct: 295 IL-------VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C G M EA L EM L DV Y +I G Q+ +A F++M+ +
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+S T+ LI+GYCK +++ A+ + +M P T LI+G C + + A+ +
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
M P +Y LI ++ M+EAL+L + M G P+ + ++G+ K
Sbjct: 468 FE-MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 461 LGNDQMAATLIME 473
G +A E
Sbjct: 527 EGRLSVAIDFYQE 539
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 161 FVFDLLIKS-CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFR 219
F + +LI C+E ++ + + + +++ I P T N LI G C Y +
Sbjct: 375 FTYTILINGLCIE-DQVAEANRLFQKMKNERIFPSSATYNSLI------HGYCKEYNM-E 426
Query: 220 EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILM 279
+ L + + P++ +F+ L+ G+ +++ ++ EM G VP++ +Y L+
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 280 ALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE 339
E M+EA +L+ +M G+ + + ++ GF+K G++ A +F++E
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSC 546
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
N V F LI G C+ G + A + DM P+ + +++G ++KR+++ + +
Sbjct: 547 WNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM-M 605
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
++ M P+ +LL + +G ++ A
Sbjct: 606 LQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 205/386 (53%), Gaps = 21/386 (5%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLL 150
D ++++T++H L +A++++ + C D C + LL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 151 KTYRQ--CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
K + ++ +++ +I + K +D ++ + + ++GI P + T + LISC+
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN- 305
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
YG + + L + ++ P+V +F+ L+ F ++G++ E++++EM +
Sbjct: 306 ------YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
P++++Y+ L+ FC ++ EA+ ++E M K +V Y+T+I GF K+ ++E+ E
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
F+EM G+ N+VT+ LI+G+ + D D+A +V+K M+ P T +L++GLC
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ ++++A+ + R + P +Y ++I+ +C+ G++E+ +L ++ KG P++
Sbjct: 480 KNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEM 474
Y+ I G+ + G+ + A +L+ +M
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 172/340 (50%), Gaps = 21/340 (6%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLL 150
D +++T++H L +A+++I + C D C LL
Sbjct: 787 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 846
Query: 151 KTYR--QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
+ ++ ++ +I S + + D ++ + + ++G+ P + T + LISC+
Sbjct: 847 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN- 905
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
YG + + L + ++ P++ +F+ L+ F + G++ E+++ EM +
Sbjct: 906 ------YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 959
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
PN+++Y+ L+ FC ++ EA+++ E M K +V YNT+I GF K+ +++K E
Sbjct: 960 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 1019
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
F+EM G+ N+VT+ LI+G+ + D D+A +V+K M+ P T +L++GLC
Sbjct: 1020 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 1079
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
+ ++++A+ + R + P +Y ++I+ +C+ G+
Sbjct: 1080 KNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGK 1118
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 178/411 (43%), Gaps = 58/411 (14%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSII---------------KSALVSRCLFDCNNAPVKF 145
HDLY+YS ++ R AL+++ S L C + V
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
+ +++ + D+ F F LI K ++ +V + RG P + T +++ +
Sbjct: 176 VDQMVEMGYKPDT--FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
K G L K ++ DV +N ++ G + M+ ++ EM+
Sbjct: 234 CK-------RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
G P++++Y+ L++ C G+ +A +L +M + + +V ++ +I F K G++ +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
AE+ + EM ++ + T+ LING+C +D A +++ M+ KD P T LI+
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 386 GLCEKKRVSEALEIIR----------------------------NA------MRDVSFCP 411
G C+ KRV E +E+ R NA M V P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+ +Y +L+ LC++G++ +A+ + + EPD+ Y+ IEG K G
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 144/296 (48%), Gaps = 8/296 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F+ L+ + ++ K + I + +++ GIS + T ++ I+C + + ++
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K+ PD+ + + L+ G+ + + ++M G P+ +++ L+
Sbjct: 146 -------KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
K EA L ++M +G + D+ Y T++ G K G I+ A K+ME G +E++
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
V + +I+G CK +D A+ ++ +M K RP+ T LI LC R S+A ++ +
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
M + P+ ++ LI ++G++ EA KL +M + +PD+ Y + I G+
Sbjct: 319 -MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 34/245 (13%)
Query: 258 EVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF 317
++ EME G PN+ +Y+ L++ C G+ +A +L +M + + ++ ++ +I F
Sbjct: 879 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 938
Query: 318 YKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
K G++ KAE+ ++EM ++ N T+ LING+C + + A + + M++KD P
Sbjct: 939 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 998
Query: 378 STIGMLIEGLCEKKRVSEALEIIR----------------------------NA------ 403
T LI G C+ KRV + +E+ R NA
Sbjct: 999 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 1058
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
M V P+ +Y +L+ LC++G++ +A+ + + EPD+ Y+ IEG K G
Sbjct: 1059 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 1118
Query: 464 DQMAA 468
+M
Sbjct: 1119 WKMGG 1123
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 127/249 (51%), Gaps = 9/249 (3%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ D + FE+++ + C + LIK + K+++ +E+ R + RG+
Sbjct: 374 CMHDRLDEAKHMFELMIS--KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
T LI + + +F+++ V + P++ ++N L+ G ++G++
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMV-------SVGVHPNILTYNILLDGLCKNGKL 484
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
V+ ++R P++Y+YNI++ C GK+ + +L+ + +KG+ +V AYNT+
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I GF + G E+A+ K+M+ G NS T+ LI + GD +++ + K+M F
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Query: 374 RPEASTIGM 382
+ASTIG+
Sbjct: 605 AGDASTIGL 613
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 138/343 (40%), Gaps = 31/343 (9%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC-------------- 208
F L+ + ++ K D I + GIS + T N+LI+C +C
Sbjct: 686 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 745
Query: 209 ---------------KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
G C G I + L D ++ +PD +F L+ G + +
Sbjct: 746 KLGYEPDIVTLNSLLNGFCHGNRI-SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 804
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
+ + M + GC P+L +Y ++ C G A L +M + +V Y+T+
Sbjct: 805 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 864
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I K + A F EME GV N +T+ LI+ C G A + DM+++
Sbjct: 865 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 924
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
P T LI+ +K ++ +A E + M S P+ +Y LI C ++ EA
Sbjct: 925 NPNLVTFSALIDAFVKKGKLVKA-EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 983
Query: 434 KLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
++ M K P++ Y+ I G+ K L EMS+
Sbjct: 984 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 1026
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K R P + FN L+ + + E++ + +M+ G +LY+Y+I + FC ++
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
A + +M G D+ ++++ G+ S +I A +M G + ++ TF LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+G A+ + M+Q+ +P+ T G ++ GLC++ + AL +++ M
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK-MEKGKI 254
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
Y +I LC+ M++AL L +M KG PD+ Y + I G A+
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 470 LIMEM 474
L+ +M
Sbjct: 315 LLSDM 319
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 199/497 (40%), Gaps = 58/497 (11%)
Query: 33 QSHIVSTVVS--LLIHHRSKSRWTNLRSLLYSTKTLTPIH-----FSQIALQLKSNPHLA 85
Q +V V+ LIH ++R + +++ +H ++ + L N LA
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 86 LRFFFFTLDNSSLCLHDLYSYSTIVHILSRA-----------RLKVQALSIIKSALVSRC 134
F S D+Y+Y+ ++ + +A L ++ +S A +
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 135 LFDCNNAPVKFFEMLLKTYRQCDSAPF--VFDLLIKSCLELKKIDGSIEIVRMLRSRGIS 192
C + + LLK ++ P ++ LI++ L + S E+++ +RS G +
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Query: 193 PQIRT-------------------CNLLISCVAKCKG-SCAGYGIFREIFGLRDGDSKVR 232
T C +I C SC +RE+ LR G S +
Sbjct: 606 GDASTIGLSSKFKREIEKPNRENACKNIIFSEEICSSESCGESYDYREV--LRTGLSDIE 663
Query: 233 LR---------------PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNI 277
L P + F+ L+ + + +++ +ME G NLY+YNI
Sbjct: 664 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 723
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
L+ FC ++ A L +M G D+ N+++ GF +I A +M G
Sbjct: 724 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 783
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
+ ++VTF LI+G A+ + M+Q+ +P+ T G ++ GLC++ AL
Sbjct: 784 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 843
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
++ N M + Y +I LC+ ++AL L +M KG P++ Y + I
Sbjct: 844 NLL-NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 902
Query: 458 YKKLGNDQMAATLIMEM 474
G A+ L+ +M
Sbjct: 903 LCNYGRWSDASRLLSDM 919
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 258 EVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF 317
+++ +M + P++ +N L++ K L E+M+ G+ D+ Y+ I F
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 318 YKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
+ Q+ A +M G E + VT L+NGYC + A+ + M++ ++P+
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 378 STIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQA 437
T LI GL + SEA+ ++ + M P +Y ++ LC+ G ++ AL L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALV-DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 438 KMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
KM E D+ IY+ I+G K + A L EM
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
K +E ++K R D F + LI L ++ + +++ ++ + P + T N LI+
Sbjct: 949 KLYEEMIK--RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 1006
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
K K G +FRE+ S+ L + ++ L+ GF++ + + + V+ +M
Sbjct: 1007 GFCKAKRVDKGMELFREM-------SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 1059
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
G PN+ +YNIL+ C GK+ +A ++E ++ + D+ YN +I G K+G+
Sbjct: 1060 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 1119
Query: 324 EKAEEFF 330
+ +F
Sbjct: 1120 KMGGIYF 1126
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 204/451 (45%), Gaps = 62/451 (13%)
Query: 66 LTPIHFSQIALQLKSNPHLALRF---FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQA 122
L P+ ++ + +++ L RF F N H S S ++HIL R+ A
Sbjct: 76 LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFK---HTSLSLSAMIHILVRSGRLSDA 132
Query: 123 ----LSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDG 178
L +I+ + VSR ++ L T+ C S VFDLLI++ ++ +K+
Sbjct: 133 QSCLLRMIRRSGVSR---------LEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLRE 183
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
+ E +LRS+G + I CN LI + + +G+++EI S+ + +V+
Sbjct: 184 AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI-------SRSGVGINVY 236
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
+ N ++ +DG+ME + ++++ G P++ +YN L++ + +G M EA +L M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
KG V YNT+I G K G+ E+A+E F EM G+ +S T+ L+ CK GDV
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 359 DSAILVYKDMLQKDFRP-----------------------------EASTI------GML 383
V+ DM +D P EA I +L
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
I+G C K +S A+ +RN M +Y ++ LC+ + EA KL +M +
Sbjct: 417 IQGYCRKGMISVAMN-LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
PD I+G+ KLGN Q A L +M
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 165/314 (52%), Gaps = 8/314 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ ++++ + + K++ + ++ +G+ P I T N LIS + + G+ E
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS-------AYSSKGLMEE 288
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
F L + P V+++N ++ G + G+ E +EV+ EM R G P+ +Y L+
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C +G + E EK++ +MR + + D+ +++++ F +SG ++KA +F ++ G+
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
++V + LI GYC+ G + A+ + +MLQ+ + T ++ GLC++K + EA ++
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
N M + + P + +LI C+ G ++ A++L KM K D+ Y+ ++G+ K
Sbjct: 469 -NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 461 LGNDQMAATLIMEM 474
+G+ A + +M
Sbjct: 528 VGDIDTAKEIWADM 541
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 122/251 (48%), Gaps = 11/251 (4%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L PD + L+ G+ R G + + + NEM + GC ++ +YN ++ C + EA+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
KL+ EM + L D +I G K G ++ A E F++M+ + + VT+ L++G+
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE-----IIRNAMRDV 407
KVGD+D+A ++ DM+ K+ P + +L+ LC K ++EA I +N V
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
C S +IK C G + KM +GF PD Y+ I G+ + N A
Sbjct: 586 MICNS------MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 468 ATLIMEMSRTQ 478
L+ +M Q
Sbjct: 640 FGLVKKMEEEQ 650
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 114/220 (51%), Gaps = 3/220 (1%)
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREA 291
R+R DV ++N L+ GF + G+++ +E+W +M +P SY+IL+ C +G + EA
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
++W+EM K ++ V N++I G+ +SG E F ++M G + +++ LI G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 352 YCKVGDVDSAILVYKDML--QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+ + ++ A + K M Q P+ T ++ G C + ++ EA E++ M +
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA-EVVLRKMIERGV 688
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
P R +Y +I + EA ++ +M +GF PD K
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 164/406 (40%), Gaps = 58/406 (14%)
Query: 103 LYSYSTIVHILSR-----------ARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLK 151
+Y+Y+T+++ L + A + LS + S + C V E +
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 152 TYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
R D P F ++ +D ++ ++ G+ P +LI +
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI------Q 418
Query: 210 GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
G C G+ LR+ + DV ++N ++ G + + ++++NEM
Sbjct: 419 GYCRK-GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
P+ Y+ IL+ C G ++ A +L+++M+ K +RLDV YNT++ GF K G I+ A+E
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
+ +M + +++ L+N C G + A V+ +M+ K+ +P +I+G C
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLI----------------KRL---------- 423
S+ + + + F P SY LI K++
Sbjct: 598 SGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 424 -----------CEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
C QM+EA + KM +G PD Y I G+
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 36/210 (17%)
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
C N +++L+ + K+REA + + +R KG + + A N +IG + G +E A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
++E+ GV N T ++N CK G ++ + +K P+ T
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT-------- 272
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
Y LI G MEEA +L M GKGF P
Sbjct: 273 ----------------------------YNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304
Query: 448 LKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
+ Y+ I G K G + A + EM R+
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 160/314 (50%), Gaps = 8/314 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ F +LIK C E +I+ S +++ L G SP + LI K +F E
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ K+ L + ++ L+ G +++G + E++ +M+ G PNLY+YN +M
Sbjct: 224 M-------GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C +G+ ++A ++++EMR +G+ ++ YNT+IGG + ++ +A + +M+ G+
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N +T+ LI+G+C VG + A+ + +D+ + P T +L+ G C K S A +++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ M + PS+ +Y +LI ME+A++L+ M G PD+ Y I G+
Sbjct: 397 K-EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 461 LGNDQMAATLIMEM 474
G A+ L M
Sbjct: 456 KGQMNEASRLFKSM 469
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 153/313 (48%), Gaps = 9/313 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+++++I S ++ + ++ SI + G P N L++ V + F E
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE- 154
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
SKV L DV+SF L+ G GE+E ++ E+ FG PN+ Y L+
Sbjct: 155 -----NKSKVVL--DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C +G++ +A+ L+ EM GL + Y +I G +K+G ++ E +++M+ GV N
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
T+ ++N CK G A V+ +M ++ T LI GLC + +++EA +++
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV- 326
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
+ M+ P+ +Y LI C G++ +AL L + +G P L Y+ + G+ +
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 462 GNDQMAATLIMEM 474
G+ AA ++ EM
Sbjct: 387 GDTSGAAKMVKEM 399
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 140/278 (50%), Gaps = 20/278 (7%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVR------ 232
+ ++ +R RG+S I T N LI G+ RE+ L + + V
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIG------------GLCREM-KLNEANKVVDQMKSDG 333
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
+ P++ ++N L+ GF G++ + +++ G P+L +YNIL++ FC +G A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
K+ +EM +G++ Y +I F +S +EKA + ME G+ + T+ LI+G+
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
C G ++ A ++K M++K+ P +I G C++ AL++++ M + P+
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK-EMEEKELAPN 512
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
SY +I+ LC++ + +EA +L KM G +P I
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ LI K++ + ++V ++S GI+P + T N LI G C G G +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID------GFC-GVGKLGKA 357
Query: 222 FGL-RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
L RD S+ L P + ++N L+ GF R G+ ++ EME G P+ +Y IL+
Sbjct: 358 LSLCRDLKSR-GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
F M +A +L M GL DV Y+ +I GF GQ+ +A FK M E
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N V + +I GYCK G A+ + K+M +K+ P ++ +IE LC++++ EA ++
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 401 RNAMRDVSFCPS 412
M D PS
Sbjct: 537 E-KMIDSGIDPS 547
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+E +IN Y + ++ +I + +M+ F P ++ L+ + ++
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGND 464
V S+ +LIK CE G++E++ L ++ GF P++ IY I+G K G
Sbjct: 157 SKVVL--DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 465 QMAATLIMEMSR 476
+ A L EM +
Sbjct: 215 EKAKDLFFEMGK 226
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 196/383 (51%), Gaps = 21/383 (5%)
Query: 105 SYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLLKTY 153
+++T++H L +A+++I + C D C + LLK
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 154 RQ--CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGS 211
+ ++ ++ +I + K ++ ++ + + ++GI P + T N LI C+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN---- 302
Query: 212 CAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPN 271
YG + + L + ++ P+V +F+ L+ F ++G++ E++++EM + P+
Sbjct: 303 ---YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 272 LYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
+++Y+ L+ FC ++ EA+ ++E M K +V YNT+I GF K+ ++E+ E F+
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
EM G+ N+VT+ LI G + GD D A ++K M+ P+ T +L++GLC+
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
++ +AL ++ ++ P +Y ++I+ +C+ G++E+ L ++ KG +P++ IY
Sbjct: 480 KLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 452 DAFIEGYKKLGNDQMAATLIMEM 474
I G+ + G + A L EM
Sbjct: 539 TTMISGFCRKGLKEEADALFREM 561
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 173/393 (44%), Gaps = 25/393 (6%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSI---------------IKSALVSRCLFDCNNAPVKF 145
+DLYSY+ +++ R AL++ + S L C + V
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
+ + Q ++ F+ LI K ++ ++ + +RG P + T +++ +
Sbjct: 173 VDQMFVMEYQPNTV--TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
K + +++ K ++ DV + ++ + ++ EM+
Sbjct: 231 CKRGDIDLALSLLKKM-------EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
G PN+ +YN L+ C G+ +A +L +M + + +V ++ +I F K G++ +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
AE+ + EM ++ + T+ LING+C +D A +++ M+ KD P T LI+
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
G C+ KRV E +E+ R M + +Y LI+ L + G + A K+ KM G
Sbjct: 404 GFCKAKRVEEGMELFRE-MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 446 PDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
PD+ Y ++G K G + A + + +++
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 144/289 (49%), Gaps = 11/289 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
K ++ ++K R D F + LI ++D + + ++ S+ P + T N LI
Sbjct: 346 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
K K G +FRE+ S+ L + ++N L+ G ++ G+ +M ++++ +M
Sbjct: 404 GFCKAKRVEEGMELFREM-------SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
G P++ +Y+IL+ C GK+ +A ++E ++ + D+ YN +I G K+G++
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
E + F + L GV+ N + + +I+G+C+ G + A ++++M + P + T L
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
I + + E+I+ MR F + ++I L DG++E++
Sbjct: 577 IRARLRDGDKAASAELIKE-MRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 140/296 (47%), Gaps = 8/296 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F+ L+ + ++ K D I + +++ IS + + N+LI+C + + ++
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K+ PD+ + + L+ G+ + + ++M PN ++N L+
Sbjct: 143 -------KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
K EA L + M +G + D+ Y T++ G K G I+ A K+ME G +E++
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
V + +I+ C +V+ A+ ++ +M K RP T LI LC R S+A ++ +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
M + P+ ++ LI ++G++ EA KL +M + +PD+ Y + I G+
Sbjct: 316 -MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 146/301 (48%), Gaps = 10/301 (3%)
Query: 175 KIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL 233
K+D ++++ M++SR + P I N L+S +AK F + L + +R+
Sbjct: 60 KLDDAVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNK-------FDLVISLGERMQNLRI 111
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
D++S+N L+ F R ++ + V +M + G P++ + + L+ +C ++ EA
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L ++M V + + +NT+I G + + +A M G + + T+ ++NG C
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K GD+D A+ + K M + + +I+ LC K V++AL + M + P+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF-TEMDNKGIRPNV 290
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+Y LI+ LC G+ +A +L + M + P++ + A I+ + K G A L E
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 474 M 474
M
Sbjct: 351 M 351
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 137/267 (51%), Gaps = 9/267 (3%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ D + FE+++ + C ++ LIK + K+++ +E+ R + RG+
Sbjct: 371 CMHDRLDEAKHMFELMIS--KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
T N LI + + IF+++ + DG + PD+ +++ L+ G + G++
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKM--VSDG-----VPPDIITYSILLDGLCKYGKL 481
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
E V+ +++ P++Y+YNI++ C GK+ + L+ + +KG++ +V Y T+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I GF + G E+A+ F+EM+ G NS T+ LI + GD ++ + K+M F
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEII 400
+ASTI M+I L + + LE++
Sbjct: 602 VGDASTISMVINMLHDGRLEKSYLEML 628
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 172/313 (54%), Gaps = 8/313 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ +I S + + D ++ + + ++G+ P + T + LISC+ Y + +
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN-------YERWSDA 314
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
L + ++ P+V +FN L+ F ++G++ E++++EM + P++++Y+ L+
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
FC ++ EA+ ++E M K +V YNT+I GF K+ +I++ E F+EM G+ N
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+VT+ LI+G+ + D D+A +V+K M+ P T L++GLC+ ++ +A+ +
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
R P+ +Y ++I+ +C+ G++E+ L ++ KG +PD+ IY+ I G+ +
Sbjct: 495 YLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 462 GNDQMAATLIMEM 474
G + A L +M
Sbjct: 554 GLKEEADALFRKM 566
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 143/345 (41%), Gaps = 31/345 (8%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAK------------- 207
F F+ L+ + ++KK D I + ++ GIS + T N+LI+C +
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145
Query: 208 ----------------CKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
G C G I + L D ++ RPD +F L+ G +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRI-SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
+ + + M + GC PNL +Y +++ C G + A L +M + +V Y+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
T+I K + A F EME GV N +T+ LI+ C A + DM+++
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 372 DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEE 431
P T LI+ ++ ++ EA E + + M S P +Y LI C +++E
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEA-EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 432 ALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
A + M K P++ Y+ I G+ K L EMS+
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 14/256 (5%)
Query: 213 AGYGIFREIF-------------GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
+G G +REI GL G K R P + FN L+ + + +++ +
Sbjct: 48 SGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL 107
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
+M+R G NLY+YNIL+ FC ++ A L +M G + ++++ G+
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+I A +M G +++TF LI+G A+ + M+Q+ +P T
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
G+++ GLC++ + A ++ N M + Y +I LC+ ++AL L +M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLL-NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 440 AGKGFEPDLKIYDAFI 455
KG P++ Y + I
Sbjct: 287 ENKGVRPNVITYSSLI 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 145/310 (46%), Gaps = 10/310 (3%)
Query: 166 LIKSCLELKKIDGSIEIVR-MLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGL 224
++++ L K+D +I + M++SR + P I N L+S +AK K F + L
Sbjct: 56 ILRNGLHSMKLDDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKK-------FDLVISL 107
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
+ ++ + +++++N L+ F R ++ + + +M + G P++ + + L+ +C
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 285 EGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
++ +A L ++M G R D + T+I G + + +A M G + N VT
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+ ++NG CK GD+D A + M +I+ LC+ + +AL + M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF-TEM 286
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGND 464
+ P+ +Y LI LC + +A +L + M + P++ ++A I+ + K G
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 465 QMAATLIMEM 474
A L EM
Sbjct: 347 VEAEKLYDEM 356
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 117/236 (49%), Gaps = 9/236 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
K ++ ++K R D F + LI ++D + + ++ S+ P + T N LI+
Sbjct: 351 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
K K G +FRE+ S+ L + ++ L+ GF++ + + + V+ +M
Sbjct: 409 GFCKAKRIDEGVELFREM-------SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
G PN+ +YN L+ C GK+ +A ++E ++ + + YN +I G K+G++
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
E + F + L GV+ + + + +I+G+C+ G + A +++ M + P++ T
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 42/253 (16%)
Query: 189 RGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFY 248
R I+P + T N LI K G E L D K + PD+ +++ L+ GF
Sbjct: 324 RKINPNVVTFNALIDAFVK-------EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
++ + ++ M C PN+ +YN L+ FC ++ E +L+ EM +GL +
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT--------------------FEHL 348
Y T+I GF+++ + A+ FK+M GV N +T FE+L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 349 ---------------INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
I G CK G V+ ++ + K +P+ +I G C K
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 394 SEALEIIRNAMRD 406
EA + R D
Sbjct: 557 EEADALFRKMRED 569
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 201/417 (48%), Gaps = 19/417 (4%)
Query: 50 KSRWTNLRSLLYSTKTLTPIHFSQIALQLK-----SNPHLALRFFFFTLDNSSLCLHDLY 104
K W N+ + L +Q+ +L P L+ FF +T D+ H L
Sbjct: 23 KGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWT-DSLPSSKHSLQ 81
Query: 105 SYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFD 164
S ++ IL++ + A ++ L R L ++P+ ++ + VF
Sbjct: 82 SSWKMILILTKHKHFKTAHQLL-DKLAQRELL---SSPLVLRSLVGGVSEDPEDVSHVFS 137
Query: 165 LLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGL 224
L+ + I+ SI + +RS G+ P ++ C +L++ + K + + + IF+++
Sbjct: 138 WLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV-- 195
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
K+ + ++H +N L+ + G+ E E++ +EME G P++++YN L++++C
Sbjct: 196 -----KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCK 250
Query: 285 EGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
+ EA + + M G+ ++ YN+ I GF + G++ +A F+E++ V +N VT
Sbjct: 251 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVT 309
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+ LI+GYC++ D+D A+ + + M + F P T ++ LCE R+ EA ++ M
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL-TEM 368
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
P + LI C+ M A+K++ KM G + D+ Y A I G+ K+
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 172/385 (44%), Gaps = 47/385 (12%)
Query: 120 VQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGS 179
+QA +++ ++LV + L D K F+ ++K + V+++L+ +C + + +
Sbjct: 168 LQACTVLLNSLVKQRLTD---TVWKIFKKMVKL--GVVANIHVYNVLVHACSKSGDPEKA 222
Query: 180 IEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHS 239
+++ + +G+ P I T N LIS CK S + E ++D + + P++ +
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVY--CKKS-----MHFEALSVQDRMERSGVAPNIVT 275
Query: 240 FNDLMMGFYRDGEMEMIEEVWNE----------------------------------MER 265
+N + GF R+G M ++ E ME
Sbjct: 276 YNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMES 335
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
G P + +YN ++ C +G++REA +L EM K + D NT+I + K +
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
A + K+M G++ + +++ LI+G+CKV ++++A M++K F P +T L++
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVD 455
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
G + + E +++ C Y LI+R+C+ Q++ A L M KG
Sbjct: 456 GFYNQNKQDEITKLLEE-FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Query: 446 PDLKIYDAFIEGYKKLGNDQMAATL 470
D I+ Y + G A+ L
Sbjct: 515 GDSVIFTTMAYAYWRTGKVTEASAL 539
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 238 HSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
H F+ LM+ + + G + V+ ++ G P+L + +L+ + K++++
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
M G+ ++ YN ++ KSG EKAE+ EME GV + T+ LI+ YCK
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYE 417
A+ V M + P T I G + R+ EA + R DV+ + +Y
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVT--ANHVTYT 311
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
LI C ++EAL+L+ M +GF P + Y++ + + G + A L+ EMS
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 163/296 (55%), Gaps = 8/296 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+F+ +I S + + +D ++ + + + ++GI P + T + LISC+ YG + +
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS-------YGRWSDA 314
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
L + ++ P++ +FN L+ F ++G+ E+++++M + P++++YN L+
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
FC ++ +A++++E M K DV YNT+I GF KS ++E E F+EM G+ +
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+VT+ LI G GD D+A V+K M+ P+ T +L++GLC ++ +ALE+
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF- 493
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ M+ Y +I+ +C+ G++++ L ++ KG +P++ Y+ I G
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 174/394 (44%), Gaps = 25/394 (6%)
Query: 100 LHDLYSYSTIVHILSRARLKVQALSII---------------KSALVSRCLFDCNNAPVK 144
+H LY+Y+ +++ R AL+++ S L C + V
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 145 FFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
+ +++ + D+ F LI K ++ +V + RG P + T ++++
Sbjct: 177 LVDQMVEMGYRPDT--ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
+ K + + ++ ++ DV FN ++ + ++ ++ EME
Sbjct: 235 LCKRGDTDLALNLLNKM-------EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G PN+ +Y+ L++ C G+ +A +L +M K + ++ +N +I F K G+
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
+AE+ + +M ++ + T+ L+NG+C +D A +++ M+ KD P+ T LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+G C+ KRV + E+ R M +Y LI+ L DG + A K+ +M G
Sbjct: 408 KGFCKSKRVEDGTELFRE-MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
PD+ Y ++G G + A + M +++
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 143/342 (41%), Gaps = 31/342 (9%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAK--------------- 207
F+ L+ + ++KK D I + ++ I + T N+LI+C +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 208 --------------CKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
G C G I + L D ++ RPD +F L+ G + +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRI-SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
+ + M + GC PNL +Y +++ C G A L +M + DV +NTI
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I K ++ A FKEME G+ N VT+ LI+ C G A + DM++K
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
P T LI+ ++ + EA E + + M S P +Y L+ C ++++A
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEA-EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 434 KLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
++ M K PD+ Y+ I+G+ K + L EMS
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 143/298 (47%), Gaps = 10/298 (3%)
Query: 166 LIKSCLELKKIDGSIEIVR-MLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGL 224
++++ L K+D +I + M++SR + P I N L+S +AK K F + L
Sbjct: 56 ILRNGLHDMKLDDAIGLFGGMVKSRPL-PSIVEFNKLLSAIAKMKK-------FDVVISL 107
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
+ ++ + ++++N L+ F R ++ + + +M + G P++ + + L+ +C
Sbjct: 108 GEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 285 EGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
++ +A L ++M G R D + T+I G + + +A M G + N VT
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+ ++NG CK GD D A+ + M + +I+ LC+ + V +AL + + M
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE-M 286
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
P+ +Y LI LC G+ +A +L + M K P+L ++A I+ + K G
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 125/251 (49%), Gaps = 11/251 (4%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ D + + FE ++ + C ++ LIK + K+++ E+ R + RG+
Sbjct: 376 CMHDRLDKAKQMFEFMVS--KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 194 QIRTCNLLISCVAKCKGSC-AGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGE 252
T LI + G C +F+++ + DG + PD+ +++ L+ G +G+
Sbjct: 434 DTVTYTTLIQGLFH-DGDCDNAQKVFKQM--VSDG-----VPPDIMTYSILLDGLCNNGK 485
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+E EV++ M++ ++Y Y ++ C GK+ + L+ + +KG++ +V YNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I G +++A K+M+ G NS T+ LI + + GD ++ + ++M
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Query: 373 FRPEASTIGML 383
F +ASTIG++
Sbjct: 606 FVGDASTIGLV 616
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 111/275 (40%), Gaps = 49/275 (17%)
Query: 213 AGYGIFREIF-------------GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
+G G +REI GL G K R P + FN L+ + + +++ +
Sbjct: 48 SGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISL 107
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
+M+R V LY+YNIL I F +
Sbjct: 108 GEKMQRLEIVHGLYTYNIL-----------------------------------INCFCR 132
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
QI A +M G E + VT L+NGYC + A+ + M++ +RP+ T
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
LI GL + SEA+ ++ + M P+ +Y +++ LC+ G + AL L KM
Sbjct: 193 FTTLIHGLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
E D+ I++ I+ K + A L EM
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 198/388 (51%), Gaps = 24/388 (6%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNA-PVKFFEML 149
D +++T+VH L + +A+++++ +V C D C P +L
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 150 LKTYR-QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
K + + ++ +++ +I + K +D + ++ + ++GI P + T N LISC+
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN- 297
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG- 267
YG + + L + + PD+ FN L+ F ++G++ E++++EM +
Sbjct: 298 ------YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
C P++ +YN L+ FC ++ E +++ EM +GL + Y T+I GF+++ + A+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
FK+M GV + +T+ L++G C G+V++A++V++ M ++D + + T +IE L
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 388 CEKKRVSEALEIIRN-AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
C+ +V + ++ + +++ V P+ +Y ++ C G EEA L +M G P
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVK--PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 447 DLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ Y+ I + G++ +A LI EM
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 192/425 (45%), Gaps = 61/425 (14%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSI---------------IKSALVSRCLFDCNNAPVKF 145
H+LY+YS ++ R AL+I + S L C + + V
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
+ +++ Q D+ F L+ + K ++ +V + +G P + T +I+ +
Sbjct: 168 VDQMVEMGYQPDTVTFT--TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
K G L + K ++ DV +N ++ G + M+ +++N+ME
Sbjct: 226 CK-------RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 266 FGCVPNLYSYNILMALFCG-----------------------------------EGKMRE 290
G P++++YN L++ C EGK+ E
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 291 AEKLWEEM-RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
AEKL++EM + K DV AYNT+I GF K ++E+ E F+EM G+ N+VT+ LI
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+G+ + D D+A +V+K M+ P+ T +L++GLC V AL ++ M+
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL-VVFEYMQKRDM 457
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
+Y +I+ LC+ G++E+ L ++ KG +P++ Y + G+ + G + A
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 470 LIMEM 474
L +EM
Sbjct: 518 LFVEM 522
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 150/314 (47%), Gaps = 10/314 (3%)
Query: 166 LIKSCLELKKIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGL 224
L + L+ K+D +I + M++SR P I + L+S +AK F + L
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNK-------FDLVISL 97
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
+ + + ++++++ + F R ++ + + +M + G P++ + N L+ FC
Sbjct: 98 GEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCH 157
Query: 285 EGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
++ EA L ++M G + D + T++ G ++ + +A + M + G + + VT
Sbjct: 158 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+ +ING CK G+ D A+ + M + + +I+GLC+ K + +A ++ N M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF-NKM 276
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGND 464
P +Y LI LC G+ +A +L + M K PDL ++A I+ + K G
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 465 QMAATLIMEMSRTQ 478
A L EM +++
Sbjct: 337 VEAEKLYDEMVKSK 350
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 142/315 (45%), Gaps = 9/315 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F L+ + ++ K D I + +++ GIS + T ++ I+ + I ++
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
L G P + + N L+ GF + + ++M G P+ ++ L+
Sbjct: 138 KLGYG-------PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
K EA L E M VKG + D+ Y +I G K G+ + A +ME G +E++
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 250
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
V + +I+G CK +D A ++ M K +P+ T LI LC R S+A ++ +
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMA-GKGFEPDLKIYDAFIEGYKKL 461
M + + P + LI ++G++ EA KL +M K PD+ Y+ I+G+ K
Sbjct: 311 -MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 462 GNDQMAATLIMEMSR 476
+ + EMS+
Sbjct: 370 KRVEEGMEVFREMSQ 384
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 121/244 (49%), Gaps = 8/244 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
K ++ ++K+ + C ++ LIK + K+++ +E+ R + RG+ T LI
Sbjct: 341 KLYDEMVKS-KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
+ + +F+++ + DG + PD+ ++N L+ G +G +E V+ M
Sbjct: 400 GFFQARDCDNAQMVFKQM--VSDG-----VHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
++ ++ +Y ++ C GK+ + L+ + +KG++ +V Y T++ GF + G
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
E+A+ F EM+ G NS T+ LI + GD ++ + K+M F +AST G++
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Query: 384 IEGL 387
L
Sbjct: 573 TNML 576
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 178/386 (46%), Gaps = 30/386 (7%)
Query: 89 FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEM 148
F + N D Y+++T+V+ L +A A+ I+ M
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV-------------------M 321
Query: 149 LLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
L + Y D + ++ +I +L ++ ++E++ + +R SP T N LIS + K
Sbjct: 322 LQEGY---DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
+ R + + + PDV +FN L+ G + E++ EM GC
Sbjct: 379 NQVEEATELARVL-------TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
P+ ++YN+L+ C +GK+ EA + ++M + G V YNT+I GF K+ + +AEE
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
F EME+ GV NSVT+ LI+G CK V+ A + M+ + +P+ T L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ +A +I++ AM P +Y LI LC+ G++E A KL + KG
Sbjct: 552 RGGDIKKAADIVQ-AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEM 474
Y+ I+G + A L EM
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 8/306 (2%)
Query: 170 CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDS 229
C E + D I M G P T N L++ + CK + I L++G
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL--CKAGHVKHAIEIMDVMLQEG-- 325
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
PDV+++N ++ G + GE++ EV ++M C PN +YN L++ C E ++
Sbjct: 326 ---YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
EA +L + KG+ DV +N++I G + A E F+EM G E + T+ LI
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+ C G +D A+ + K M T LI+G C+ + EA EI + M
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF-DEMEVHGV 501
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
+ +Y LI LC+ ++E+A +L +M +G +PD Y++ + + + G+ + AA
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 470 LIMEMS 475
++ M+
Sbjct: 562 IVQAMT 567
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 39/279 (13%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L+PD H +N ++ ++++E +M +G P++ ++N+L+ C ++R A
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+ E+M GL D + T++ G+ + G ++ A ++M G ++V+ +++G+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 353 CKVGDVDS------------------------------------AILVYKDMLQKDFRPE 376
CK G V+ AI + MLQ+ + P+
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAM-RDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
T +I GLC+ V EA+E++ + RD S P+ +Y LI LC++ Q+EEA +L
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS--PNTVTYNTLISTLCKENQVEEATEL 387
Query: 436 QAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ KG PD+ +++ I+G N ++A L EM
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 112/212 (52%)
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
++ FG P+ + YN ++ L ++ E +M V G++ DV+ +N +I ++ Q
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
+ A ++M G+ + TF ++ GY + GD+D A+ + + M++ ++ +
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
++ G C++ RV +AL I+ F P + ++ L+ LC+ G ++ A+++ M +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
G++PD+ Y++ I G KLG + A ++ +M
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 165/368 (44%), Gaps = 35/368 (9%)
Query: 96 SSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQ 155
S+LC + +T + + ++ + + S + CL + ++ FE + +
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS--KG 430
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C+ F +++LI S K+D ++ +++ + G + + T N LI K +
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 216 GIFRE--IFG----------LRDGDSKVR----------------LRPDVHSFNDLMMGF 247
IF E + G L DG K R +PD +++N L+ F
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 248 YRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDV 307
R G+++ ++ M GC P++ +Y L++ C G++ A KL +++KG+ L
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Query: 308 TAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNSVTFEHLINGYCKVGD-VDSAILVY 365
AYN +I G ++ + +A F+EM E ++V++ + G C G + A+
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
++L+K F PE S++ ML EGL ++++ M+ F S ++K L +
Sbjct: 671 VELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVS---MVKGLLK 727
Query: 426 DGQMEEAL 433
+ ++AL
Sbjct: 728 IRKFQDAL 735
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 222/490 (45%), Gaps = 68/490 (13%)
Query: 24 SSASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTPIHFSQIALQLKSNPH 83
+ STP S I S + L+ S+W + + LTP S L L P+
Sbjct: 33 AQTSTPESVLPPITSEI---LLESIRSSQWHIVE---HVADKLTPSLVSTTLLSLVKTPN 86
Query: 84 LALRFF----FFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCN 139
LA F + LD + CL + ++S+ ++K + SR N
Sbjct: 87 LAFNFVNHIDLYRLDFQTQCL--------AIAVISKLSSPKPVTQLLKEVVTSRK----N 134
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCN 199
+ F E++L R + +FDLL++ C +L+ +D +IE +++ +G P+ TCN
Sbjct: 135 SIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCN 194
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
+++ +++ + + +++ ++ ++ +V++FN ++ ++G+++ +
Sbjct: 195 HILTLLSRLNRIENAWVFYADMY-------RMEIKSNVYTFNIMINVLCKEGKLKKAKGF 247
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
ME FG P + +YN L+ F G++ A + EM+ KG + D+ YN I+
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN 307
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
G +A E +EM+ G+ +SV++ LI G GD++ A +M+++ P T
Sbjct: 308 EG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYT 364
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDV--------------SFC--------------- 410
LI GL + ++ EA EI+ +R+ +C
Sbjct: 365 YNTLIHGLFMENKI-EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 411 ------PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGND 464
P++ +Y LI LC + EA +L K+ GKG +PDL + + ++G+ +GN
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483
Query: 465 QMAATLIMEM 474
A +L+ EM
Sbjct: 484 DRAFSLLKEM 493
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 46/335 (13%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
+I+G+ I+ ++S+G P ++T N ++S + C A + RE+ ++ L
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWM--CNEGRASE-VLREM-------KEIGLV 324
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD S+N L+ G +G++EM +EM + G VP Y+YN L+ E K+ AE L
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI----- 349
E+R KG+ LD YN +I G+ + G +KA EM G++ T+ LI
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 350 ------------------------------NGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+G+C +G++D A + K+M P+ T
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
L+ GLC + + EA E++ M+ P SY LI + G + A ++ +M
Sbjct: 505 YNCLMRGLCGEGKFEEARELM-GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
GF P L Y+A ++G K ++A L+ EM
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 32/257 (12%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ ++ LI KI+ + ++R +R +GI T N+LI+ + + + + E
Sbjct: 363 YTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE 422
Query: 221 IFGLRDG-----------------DSKVR-------------LRPDVHSFNDLMMGFYRD 250
+ + DG +K R ++PD+ N LM G
Sbjct: 423 M--MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 251 GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
G M+ + EM+ P+ +YN LM CGEGK EA +L EM+ +G++ D +Y
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
NT+I G+ K G + A EM G +T+ L+ G K + + A + ++M
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 371 KDFRPEASTIGMLIEGL 387
+ P S+ +IE +
Sbjct: 601 EGIVPNDSSFCSVIEAM 617
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 164/296 (55%), Gaps = 8/296 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+F+ +I S + + +D ++ + + + ++GI P + T + LISC+ C+ YG + +
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL------CS-YGRWSDA 238
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
L + ++ P++ +FN L+ F ++G+ E++ ++M + P++++YN L+
Sbjct: 239 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 298
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
FC ++ +A++++E M K D+ YNT+I GF KS ++E E F+EM G+ +
Sbjct: 299 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 358
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+VT+ LI G GD D+A V+K M+ P+ T +L++GLC ++ +ALE+
Sbjct: 359 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF- 417
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ M+ Y +I+ +C+ G++++ L ++ KG +P++ Y+ I G
Sbjct: 418 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 473
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 10/317 (3%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRM--LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
F F+ L+ + ++KK D I + + + G P I T + L++ G C G I
Sbjct: 43 FEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLN------GYCHGKRI- 95
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
+ L D ++ RPD +F L+ G + + + + M + GC PNL +Y ++
Sbjct: 96 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 155
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ C G + A L +M + DV +NTII K ++ A FKEME G+
Sbjct: 156 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 215
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
N VT+ LI+ C G A + DM++K P T LI+ ++ + EA E
Sbjct: 216 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA-E 274
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+ + M S P +Y LI C ++++A ++ M K PDL Y+ I+G+
Sbjct: 275 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 334
Query: 459 KKLGNDQMAATLIMEMS 475
K + L EMS
Sbjct: 335 CKSKRVEDGTELFREMS 351
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 145/317 (45%), Gaps = 8/317 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
F LI K ++ +V + RG P + T ++++ + K G
Sbjct: 116 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK-------RGDIDLA 168
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
F L + ++ DV FN ++ + ++ ++ EME G PN+ +Y+ L++
Sbjct: 169 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 228
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C G+ +A +L +M K + ++ +N +I F K G+ +AE+ +M ++ +
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 288
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
T+ LING+C +D A +++ M+ KD P+ T LI+G C+ KRV + E+ R
Sbjct: 289 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 348
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
M +Y LI+ L DG + A K+ +M G PD+ Y ++G
Sbjct: 349 E-MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 407
Query: 462 GNDQMAATLIMEMSRTQ 478
G + A + M +++
Sbjct: 408 GKLEKALEVFDYMQKSE 424
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 125/251 (49%), Gaps = 11/251 (4%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ D + + FE ++ + C ++ LIK + K+++ E+ R + RG+
Sbjct: 300 CMHDRLDKAKQMFEFMVS--KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 357
Query: 194 QIRTCNLLISCVAKCKGSC-AGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGE 252
T LI + G C +F+++ + DG + PD+ +++ L+ G +G+
Sbjct: 358 DTVTYTTLIQGLFH-DGDCDNAQKVFKQM--VSDG-----VPPDIMTYSILLDGLCNNGK 409
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+E EV++ M++ ++Y Y ++ C GK+ + L+ + +KG++ +V YNT
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I G +++A K+M+ G +S T+ LI + + GD ++ + ++M
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 529
Query: 373 FRPEASTIGML 383
F +ASTIG++
Sbjct: 530 FVGDASTIGLV 540
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 164/327 (50%), Gaps = 10/327 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
K +E +L + C + V+ LIK+ + + +I + + ++ SP ++ N +
Sbjct: 468 KVYEKMLDS--DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
C+ K G +F EI R PD S++ L+ G + G E++ M
Sbjct: 526 CMFKAGEPEKGRAMFEEI-------KARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
+ GCV + +YNI++ FC GK+ +A +L EEM+ KG V Y ++I G K ++
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
++A F+E + +E N V + LI+G+ KVG +D A L+ ++++QK P T L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
++ L + + ++EAL + +M+++ P++ +Y +LI LC+ + +A +M +G
Sbjct: 699 LDALVKAEEINEAL-VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATL 470
+P Y I G K GN A L
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGAL 784
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 144/333 (43%), Gaps = 46/333 (13%)
Query: 160 PFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTC-NLLISCVAKCKGSCAGYGIF 218
P ++ L+ + D +I+ + G P + TC +++ CV K
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANK--------L 149
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
RE + + K + RP ++ L+ F +M+ ++ +M+ G P ++ + L
Sbjct: 150 REGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTL 209
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ F EG++ A L +EM+ L D+ YN I F K G+++ A +FF E+E G+
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG------------ 386
+ + VT+ +I CK +D A+ +++ + + P +I G
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 387 LCEKKR-----------------------VSEALEIIRNAMRDVSFCPSRKSYELLIKRL 423
L E++R V EAL++ +D + P+ +Y +LI L
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA--PNLSTYNILIDML 387
Query: 424 CEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
C G+++ A +L+ M G P+++ + ++
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 181/388 (46%), Gaps = 30/388 (7%)
Query: 104 YSYSTIV-------------HILSRARLKVQALSIIKSALVSRCLFDCN--NAPVKFFEM 148
Y+Y+T++ +L R R K S+I + CL + +K FE
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 149 LLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
+ K D+AP + +++LI K+D + E+ ++ G+ P +RT N+++ +
Sbjct: 369 MKK-----DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
K + +F E+ D KV PD +F L+ G + G ++ +V+ +M
Sbjct: 424 KSQKLDEACAMFEEM------DYKV-CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
C N Y L+ F G+ + K++++M + D+ NT + +K+G+ EK
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
F+E++ ++ ++ LI+G K G + ++ M ++ + ++I+G
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
C+ +V++A +++ M+ F P+ +Y +I L + +++EA L + K E
Sbjct: 597 FCKCGKVNKAYQLLEE-MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 447 DLKIYDAFIEGYKKLGNDQMAATLIMEM 474
++ IY + I+G+ K+G A ++ E+
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 134/313 (42%), Gaps = 38/313 (12%)
Query: 199 NLLISCVAKCKGSCAGYGI---FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM 255
N + C GYG F E + L + P V ++N ++ + G+++
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIG 315
+V+ EM++ PNL +YNIL+ + C GK+ A +L + M+ GL +V N ++
Sbjct: 362 ALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 316 GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP 375
KS ++++A F+EM+ + +TF LI+G KVG VD A VY+ ML D R
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 376 EASTIGMLIEGLCEKKRVSEALEIIRN--------------------------------- 402
+ LI+ R + +I ++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 403 -AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
++ F P +SY +LI L + G E +L M +G D + Y+ I+G+ K
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 462 GNDQMAATLIMEM 474
G A L+ EM
Sbjct: 601 GKVNKAYQLLEEM 613
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 132/304 (43%), Gaps = 29/304 (9%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
D SYS ++H L +A + + S C+ D
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR---------------------- 588
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++++I + K++ + +++ ++++G P + T +I +AK Y +F E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE- 647
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
SK R+ +V ++ L+ GF + G ++ + E+ + G PNLY++N L+
Sbjct: 648 -----AKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
++ EA ++ M+ + Y +I G K + KA F++EM+ G++ +
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
++++ +I+G K G++ A ++ P+++ +IEGL R +A +
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Query: 402 NAMR 405
R
Sbjct: 822 ETRR 825
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ LI ++ +ID + I+ L +G++P + T N L+ + K + F+ +
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+++ P+ ++ L+ G + + W EM++ G P+ SY +++
Sbjct: 719 -------KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
G + EA L++ + G D YN +I G + A F+E G+ +
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831
Query: 342 SVTFEHLINGYCKVGDVDSAILV 364
+ T L++ K ++ A +V
Sbjct: 832 NKTCVVLLDTLHKNDCLEQAAIV 854
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 148/312 (47%), Gaps = 8/312 (2%)
Query: 152 TYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGS 211
T R F+ LI ++ +D + + P + T + LI+ + K
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 212 CAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPN 271
+G+F E+ K L P+ F L+ G R+GE+++++E + +M G P+
Sbjct: 327 DGAHGLFDEM-------CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 272 LYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
+ YN L+ FC G + A + + M +GLR D Y T+I GF + G +E A E K
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
EM+ G+E + V F L+ G CK G V A ++ML+ +P+ T M+++ C+K
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
++++ D PS +Y +L+ LC+ GQM+ A L M G PD Y
Sbjct: 500 DAQTGFKLLKEMQSD-GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITY 558
Query: 452 DAFIEGYKKLGN 463
+ +EG+ + N
Sbjct: 559 NTLLEGHHRHAN 570
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 166/342 (48%), Gaps = 29/342 (8%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F+ D L+ + +L I +I+ R+ R IR C L+ + K + +G + E
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 221 IFGL-----------------RDGD-----------SKVRLRPDVHSFNDLMMGFYRDGE 252
I ++G+ +K L+P V SFN L+ G+ + G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
++ + ++ME+ P++++Y+ L+ C E KM A L++EM +GL + + T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I G ++G+I+ +E +++M G++ + V + L+NG+CK GD+ +A + M+++
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
RP+ T LI+G C V ALE IR M R + L+ +C++G++ +A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALE-IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ +M G +PD Y ++ + K G+ Q L+ EM
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
++PD ++ +M F + G+ + ++ EM+ G VP++ +YN+L+ C G+M+ A+
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLIN 350
L + M G+ D YNT++ G ++ K + ++ E+ G+ ++ +++ ++N
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK--RYIQKPEI-GIVADLASYKSIVN 595
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 164/309 (53%), Gaps = 8/309 (2%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
L++ ++++K + ++ ++ RG + + N+L+ KG C + + LR
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILL------KGLCRNLECGKAVSLLR 166
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
+ + L PDV S+N ++ GF E+E E+ NEM+ GC +L ++ IL+ FC
Sbjct: 167 EM-RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
GKM EA +EM+ GL D+ Y ++I GF G++++ + F E+ G ++T+
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
LI G+CK+G + A +++ M+++ RP T LI+GLC + EAL+++ N M
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL-NLMI 344
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
+ P+ +Y ++I +LC+DG + +A+++ M + PD Y+ + G G+
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 466 MAATLIMEM 474
A+ L+ M
Sbjct: 405 EASKLLYLM 413
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 163/333 (48%), Gaps = 10/333 (3%)
Query: 149 LLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
LL+ R+ P F ++ +I+ E K+++ ++E+ ++ G S + T +LI
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
K G +E+ + L D+ + L+ GF GE++ + +++E+
Sbjct: 224 KAGKMDEAMGFLKEM-------KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G P +YN L+ FC G+++EA +++E M +G+R +V Y +I G G+ ++A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
+ M E N+VT+ +IN CK G V A+ + + M ++ RP+ T +L+ G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 387 LCEKKRVSEALEIIRNAMRDVSFC-PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
LC K + EA +++ ++D S+ P SY LI LC++ ++ +AL + + K
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 446 PDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
D + + K G+ A L ++S ++
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 165/396 (41%), Gaps = 84/396 (21%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C + + +LI + + K+D ++ ++ ++ G+ + LI C G
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
+F E+ L GDS P ++N L+ GF + G+++ E++ M G PN+Y+Y
Sbjct: 268 ALFDEV--LERGDS-----PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
L+ CG GK +EA +L M K + YN II K G + A E + M+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSA----ILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
+++T+ L+ G C GD+D A L+ KD D P+ + LI GLC++
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDVISYNALIHGLCKEN 438
Query: 392 R-----------------------------------VSEALE---------IIRN----- 402
R V++A+E I+RN
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498
Query: 403 AMRDVSFC---------------------PSRKSYELLIKRLCEDGQMEEALKLQAKMAG 441
AM D FC PS Y L+ LC++G +++A +L +M
Sbjct: 499 AMID-GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 442 KGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
PD+ ++ I+G K G+ + A +L++ MSR
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 10/304 (3%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ + LI + K +++++ ++ + P T N++I+ + CK + E
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL--CKDGLVADAV--E 373
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV--PNLYSYNIL 278
I L K R RPD ++N L+ G G+++ ++ M + P++ SYN L
Sbjct: 374 IVELM---KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ C E ++ +A +++ + K D N ++ K+G + KA E +K++ +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
NS T+ +I+G+CK G ++ A + M + +P L+ LC++ + +A
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+ RD +F P S+ ++I + G ++ A L M+ G PDL Y I +
Sbjct: 551 LFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 459 KKLG 462
KLG
Sbjct: 610 LKLG 613
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 149/324 (45%), Gaps = 14/324 (4%)
Query: 138 CNNAPVKFFEMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
C K LL + D P ++++I + + ++EIV +++ R P
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 196 RTCNLLISCVAKCKGSCAGYGI--FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
T N+L+ G CA + ++ L DS PDV S+N L+ G ++ +
Sbjct: 388 ITYNILLG------GLCAKGDLDEASKLLYLMLKDSSYT-DPDVISYNALIHGLCKENRL 440
Query: 254 EMIEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
++++ + E+ G + + NIL+ G + +A +LW+++ + + Y
Sbjct: 441 HQALDIYDLLVEKLG-AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I GF K+G + A+ +M + ++ + + L++ CK G +D A ++++M + +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
P+ + ++I+G + + A E + M P +Y LI R + G ++EA
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSA-ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIE 456
+ KM GFEPD I D+ ++
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLK 642
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 130/310 (41%), Gaps = 29/310 (9%)
Query: 79 KSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDC 138
K + A + + L +SS D+ SY+ ++H L + QAL I
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI------------- 446
Query: 139 NNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTC 198
+++L++ D ++L+ S L+ ++ ++E+ + + I T
Sbjct: 447 -------YDLLVEKLGAGDRV--TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
+I K G+ GL L+P V +N L+ ++G ++
Sbjct: 498 TAMIDGFCKT-------GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
++ EM+R P++ S+NI++ G ++ AE L M GL D+ Y+ +I F
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
K G +++A FF +M G E ++ + ++ G+ D + K ++ KD +
Sbjct: 611 KLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKE 670
Query: 379 TIGMLIEGLC 388
+++ +C
Sbjct: 671 LTCTVMDYMC 680
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 1/230 (0%)
Query: 241 NDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV 300
N+LM R E+ + +M N S + L+ + K A + M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDS 360
+G +V +N ++ G ++ + KA +EM + + ++ +I G+C+ +++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 361 AILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLI 420
A+ + +M T G+LI+ C+ ++ EA+ ++ M+ + Y LI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE-MKFMGLEADLVVYTSLI 254
Query: 421 KRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
+ C+ G+++ L ++ +G P Y+ I G+ KLG + A+ +
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 186/400 (46%), Gaps = 30/400 (7%)
Query: 80 SNPHLALRFFFFTLDN--SSLCLHDLYSYSTIVHILSRARLKVQALSIIKSAL---VSRC 134
S PH ALR L+N S C ++ +Y T+V K + + L VS C
Sbjct: 160 SRPHAALRL----LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLC 215
Query: 135 L--FD------CNNAPVKFFEMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVR 184
L F+ C VK E LL + P F ++L I+ + ++DG++ +V
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 185 MLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLM 244
L +G P + T N LI CK S F+E L PD +++N L+
Sbjct: 276 CLIEQGPKPDVITYNNLI--YGLCKNS-----KFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 245 MGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLR 304
G+ + G +++ E + + G VP+ ++Y L+ C EG+ A L+ E KG++
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 305 LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV 364
+V YNT+I G G I +A + EM G+ TF L+NG CK+G V A +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 365 YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLC 424
K M+ K + P+ T +LI G + ++ ALEI+ + M D P +Y L+ LC
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL-DVMLDNGVDPDVYTYNSLLNGLC 507
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG---YKKL 461
+ + E+ ++ M KG P+L ++ +E Y+KL
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 180/391 (46%), Gaps = 49/391 (12%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVS---------RCLFD-------CNNAPVKF 145
D Y+Y+T++ + + A I+ A+ + R L D N A F
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS-- 203
E L K + +++ LIK I + ++ + +G+ P+++T N+L++
Sbjct: 380 NEALGKGIK---PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 204 CVAKCKGSCAGY-------GIFREIFG----LRDGDSKVRLR---------------PDV 237
C C G G F +IF + +++++ PDV
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 238 HSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
+++N L+ G + + E + E + M GC PNL+++NIL+ C K+ EA L EE
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG-GVESNSVTFEHLINGYCKVG 356
M+ K + D + T+I GF K+G ++ A F++ME V S++ T+ +I+ + +
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+V A ++++M+ + P+ T ++++G C+ V+ + + M + F PS +
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN-GFIPSLTTL 675
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+I LC + ++ EA + +M KG P+
Sbjct: 676 GRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P V S+N +M G + +V+ M G P++YS+ I M FC + A +L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
M +G ++V AY T++GGFY+ + E F +M GV TF L+ CK
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
GDV + ++++ P T + I+GLC++ + A+ ++ + + P
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV-GCLIEQGPKPDVI 287
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
+Y LI LC++ + +EA KM +G EPD Y+ I GY K G Q+A ++
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 7/287 (2%)
Query: 188 SRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGF 247
+GI P + N LI ++ G+ E L + S+ L P+V +FN L+ G
Sbjct: 384 GKGIKPNVILYNTLIKGLSN-------QGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 248 YRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDV 307
+ G + + + M G P+++++NIL+ + + KM A ++ + M G+ DV
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 308 TAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKD 367
YN+++ G K+ + E E +K M G N TF L+ C+ +D A+ + ++
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDG 427
M K P+A T G LI+G C+ + A + R S +Y ++I E
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 428 QMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ A KL +M + PD Y ++G+ K GN + ++EM
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 155/333 (46%), Gaps = 10/333 (3%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
V FE + + C+ F ++ ++ ++ D + ++ +R RGI+P + + + +
Sbjct: 96 VNVFERM--DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
K A + + S +V ++ ++ GFY + E++ +
Sbjct: 154 KSFCKTSRPHAALRLLNNM-------SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M G L ++N L+ + C +G ++E EKL +++ +G+ ++ YN I G + G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
++ A + G + + +T+ +LI G CK A + M+ + P++ T
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
LI G C+ V A I+ +A+ + F P + +Y LI LC +G+ AL L + GK
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFN-GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
G +P++ +Y+ I+G G AA L EMS
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 18/270 (6%)
Query: 157 DSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG 216
D + ++ L+ + K + +E + + +G +P + T N+L+ + + Y
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR-------YR 545
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER-FGCVPNLYSY 275
E GL + + PD +F L+ GF ++G+++ ++ +ME + + +Y
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
NI++ F + + AEKL++EM + L D Y ++ GF K+G + +F EM
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC--EKKRV 393
G + T +IN C V A + M+QK PEA + +C +KK V
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEV 719
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRL 423
+ ++ + ++ C + +YELL L
Sbjct: 720 AAPKLVLEDLLKKS--CITYYAYELLFDGL 747
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 122/285 (42%), Gaps = 27/285 (9%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSAL---VSRCLFDCNN-----APVKFFEMLLKTY 153
D+++++ ++H S AL I+ L V ++ N+ FE +++TY
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 154 RQ-----CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
+ C F F++L++S +K+D ++ ++ ++++ ++P T LI K
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
Y +FR++ + ++ ++N ++ F + M E+++ EM
Sbjct: 580 GDLDGAYTLFRKM------EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
P+ Y+Y +++ FC G + K EM G +T +I ++ +A
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVG--DVDSAILVYKDMLQK 371
M G+ +V N C V +V + LV +D+L+K
Sbjct: 694 IIHRMVQKGLVPEAV------NTICDVDKKEVAAPKLVLEDLLKK 732
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 216/466 (46%), Gaps = 39/466 (8%)
Query: 22 LYSSAST---PPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTPIHFSQIALQL 78
L SS+ST P + V+ + L+ K W+ L +T I+ +++ QL
Sbjct: 25 LCSSSSTITGSPCPPRYDVAVIADLI----EKQHWSKL------GVHVTDINPNELFRQL 74
Query: 79 KS---NPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCL 135
S +P L LR++ + + NS + + ++ ++H L+ A+ + S + +
Sbjct: 75 ISSELDPDLCLRYYSWLVKNSDISVSLELTFK-LLHSLANAKRYSKIRSFLDGFV----- 128
Query: 136 FDCNNAPVKFFEMLLKTYRQCDSA---PFVFDLLIKSCLELKKIDGSIEIVRMLRSRGIS 192
N + CD+ + D+L+ + + + E + G
Sbjct: 129 ---RNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 193 PQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGE 252
+C L+ + K S +++E+ + +++P+V +FN ++ + G+
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMI-------RRKIQPNVFTFNVVINALCKTGK 238
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFC---GEGKMREAEKLWEEMRVKGLRLDVTA 309
M +V +M+ +GC PN+ SYN L+ +C G GKM +A+ + +EM + ++T
Sbjct: 239 MNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTT 298
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
+N +I GF+K + + + FKEM V+ N +++ LING C G + AI + M+
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQM 429
+P T LI G C+ + EAL++ +++ P+ + Y +LI C+ G++
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMF-GSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
++ L+ +M +G PD+ Y+ I G + GN + A L +++
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 130/237 (54%), Gaps = 4/237 (1%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
LM+ ++ +E V+ EM R PN++++N+++ C GKM +A + E+M+V G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 303 LRLDVTAYNTIIGGFYK---SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVD 359
+V +YNT+I G+ K +G++ KA+ KEM V N TF LI+G+ K ++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
++ V+K+ML +D +P + LI GLC ++SEA+ +R+ M P+ +Y L
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS-MRDKMVSAGVQPNLITYNAL 372
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
I C++ ++EAL + + G+G P ++Y+ I+ Y KLG L EM R
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 161/326 (49%), Gaps = 6/326 (1%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
R+ F F+++I + + K++ + +++ ++ G SP + + N LI K G+
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
Y + + + D + P++ +FN L+ GF++D + +V+ EM PN+
Sbjct: 277 MYKADAVLKEMVEND----VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
SYN L+ C GK+ EA + ++M G++ ++ YN +I GF K+ +++A + F +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
+ G + + LI+ YCK+G +D + ++M ++ P+ T LI GLC +
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
A ++ P ++ +L++ C G+ +A L +M+ G +P Y+
Sbjct: 453 EAAKKLFDQLTS--KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 454 FIEGYKKLGNDQMAATLIMEMSRTQK 479
++GY K GN + A + +M + ++
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERR 536
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 160/312 (51%), Gaps = 10/312 (3%)
Query: 147 EMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
+ +LK + D +P F++LI + + GS+++ + + + + P + + N LI+
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN- 339
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
G C G G E +RD ++P++ ++N L+ GF ++ ++ +++ ++
Sbjct: 340 -----GLCNG-GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G VP YN+L+ +C GK+ + L EEM +G+ DV YN +I G ++G IE
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
A++ F ++ G+ + VTF L+ GYC+ G+ A ++ K+M + +P T +++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+G C++ + A + ++ + SY +L++ + G++E+A L +M KG
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 445 EPDLKIYDAFIE 456
P+ Y+ E
Sbjct: 573 VPNRITYEIVKE 584
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 26/252 (10%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
++ LI + + ++++ ++ +G P R N+LI A CK G +
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID--AYCK-----LGKIDD 419
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
F L++ + + PDV ++N L+ G R+G +E +++++++ G +P+L +++ILM
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILME 478
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG-VE 339
+C +G+ R+A L +EM GL+ YN ++ G+ K G ++ A +ME +
Sbjct: 479 GYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLR 538
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
N ++ L+ GY + G ++ A ++ +ML+K P T EI
Sbjct: 539 MNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT-----------------YEI 581
Query: 400 IRNAMRDVSFCP 411
++ M D F P
Sbjct: 582 VKEEMVDQGFVP 593
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 163/313 (52%), Gaps = 8/313 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+++ +I + K++D +++++ + GI P + T N LIS G C+ G + +
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS------GLCSS-GRWSDA 240
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ +K + PDV +FN L+ ++G + EE + EM R P++ +Y++L+
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C ++ EAE+++ M KG DV Y+ +I G+ KS ++E + F EM GV N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+VT+ LI GYC+ G ++ A +++ M+ P T +L+ GLC+ ++ +AL I+
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
+ M+ +Y ++I+ +C+ G++ +A + + +G PD+ Y + G K
Sbjct: 421 D-MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 462 GNDQMAATLIMEM 474
G + A L +M
Sbjct: 480 GLRREADALFRKM 492
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 174/383 (45%), Gaps = 71/383 (18%)
Query: 145 FFEMLLKTYRQCDSAPFVFDL--LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
FF M+ QC P + D L+ + ++KK D I + ++ GI + TCN+L+
Sbjct: 69 FFHMV-----QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 203 SCVAKC-----------------------------KGSCAGYGIFREIFGLRDGDSKVRL 233
+C +C G C G ++ ++ + D +
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY-MFDQMVGMGY 182
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+P+V +N ++ G + +++ ++ N ME+ G P++ +YN L++ C G+ +A +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+ M + + DV +N +I K G++ +AEEF++EM ++ + VT+ LI G C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE---------IIRNAM 404
+D A ++ M+ K P+ T +LI G C+ K+V ++ ++RN +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 405 ----------------------RDVSFC---PSRKSYELLIKRLCEDGQMEEALKLQAKM 439
R + FC P+ +Y +L+ LC++G++E+AL + A M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 440 AGKGFEPDLKIYDAFIEGYKKLG 462
G + D+ Y+ I G K G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAG 445
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 11/257 (4%)
Query: 152 TYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGS 211
T R+ F F+ LI +C++ ++ + E + R + P I T +LLI G
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY------GL 301
Query: 212 CAGYGI--FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
C + E+FG PDV +++ L+ G+ + ++E +++ EM + G V
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCF---PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
N +Y IL+ +C GK+ AE+++ M G+ ++ YN ++ G +G+IEKA
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
+M+ G++++ VT+ +I G CK G+V A +Y + + P+ T ++ GL +
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 390 KKRVSEALEIIRNAMRD 406
K EA + R D
Sbjct: 479 KGLRREADALFRKMKED 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 113/233 (48%), Gaps = 9/233 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
+F+E +++ R D + LLI ++D + E+ + S+G P + T ++LI+
Sbjct: 277 EFYEEMIR--RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
K K G +F E+ S+ + + ++ L+ G+ R G++ + EE++ M
Sbjct: 335 GYCKSKKVEHGMKLFCEM-------SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
G PN+ +YN+L+ C GK+ +A + +M+ G+ D+ YN II G K+G++
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
A + + + G+ + T+ ++ G K G A +++ M + P
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
+++M++ G+ N T L+N +C+ + A+ M++ P T G L+ G C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
RV +AL + + M + + P+ Y +I LC+ Q++ AL L +M G PD+
Sbjct: 163 RGDRVYDALYMF-DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
Y++ I G G A ++ M++ +
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 186/436 (42%), Gaps = 83/436 (19%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDS 158
C+ + Y T++H LS+ +AL +++ + C+ D
Sbjct: 248 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE------------------- 288
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
F+ +I + +I+ + ++V + RG +P T L++ + K A +F
Sbjct: 289 ---TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 219 REI------------FGL----RDGDSKVRLR---------PDVHSFNDLMMGFYRDGEM 253
I G R D+K L PDV ++N L+ G++++G +
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
+ EV ++M GC PN+YSY IL+ FC GK+ EA + EM GL+ + +N +
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I F K +I +A E F+EM G + + TF LI+G C+V ++ A+ + +DM+ +
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 374 RPEASTIGMLI-----------------------------------EGLCEKKRVSEALE 398
T LI +GLC V +A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+ +RD PS S +LI LC G +EEA++ Q +M +G PD+ +++ I G
Sbjct: 586 LFEKMLRD-GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 459 KKLGNDQMAATLIMEM 474
+ G + T+ ++
Sbjct: 645 CRAGRIEDGLTMFRKL 660
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 143/284 (50%), Gaps = 8/284 (2%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
++E++ +R++G P + + +L+ K Y + E+ DG L+P+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA--DG-----LKPNTV 460
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
FN L+ F ++ + E++ EM R GC P++Y++N L++ C +++ A L +M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
+G+ + YNT+I F + G+I++A + EM G + +T+ LI G C+ G+V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
D A +++ ML+ P + +LI GLC V EA+E + + S P ++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNS 639
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
LI LC G++E+ L + K+ +G PD ++ + K G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 149/303 (49%), Gaps = 8/303 (2%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
+ C + + +L+ +L KID + ++ + + G+ P N LIS K
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
IFRE+ R G +PDV++FN L+ G E++ + +M G V N
Sbjct: 478 AVEIFREM--PRKG-----CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
+YN L+ F G+++EA KL EM +G LD YN++I G ++G+++KA F++M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
G ++++ LING C+ G V+ A+ K+M+ + P+ T LI GLC R+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
+ L + R ++ P ++ L+ LC+ G + +A L + GF P+ + +
Sbjct: 651 EDGLTMFRK-LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 454 FIE 456
++
Sbjct: 710 LLQ 712
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 159/331 (48%), Gaps = 16/331 (4%)
Query: 145 FFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
F++ML R+ F F +++K+ + +ID ++ ++R + G P LI
Sbjct: 205 FYDML---SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 261
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
++KC + E+F + PD +FND+++G + + ++ N M
Sbjct: 262 LSKCNRVNEALQLLEEMF-------LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G P+ +Y LM C G++ A+ L+ + + ++ +NT+I GF G+++
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLD 370
Query: 325 KAEEFFKEMELG-GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
A+ +M G+ + T+ LI GY K G V A+ V DM K +P + +L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
++G C+ ++ EA ++ N M P+ + LI C++ ++ EA+++ +M KG
Sbjct: 431 VDGFCKLGKIDEAYNVL-NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+PD+ +++ I G ++ + A L+ +M
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 4/244 (1%)
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREA 291
++ P + +F +M F E++ + +M + GCVPN Y L+ ++ EA
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+L EEM + G D +N +I G K +I +A + M + G + +T+ +L+NG
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
CK+G VD+A KD+ + +PE LI G R+ +A ++ + + P
Sbjct: 332 LCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
+Y LI ++G + AL++ M KG +P++ Y ++G+ KLG A ++
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 472 MEMS 475
EMS
Sbjct: 448 NEMS 451
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 120/239 (50%), Gaps = 9/239 (3%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
+ C + F+ LI E+ +I ++ ++R + S G+ T N LI+ +
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR------ 541
Query: 214 GYGIFREIFGLRDGDSKVRLRP-DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNL 272
G +E L + + + P D ++N L+ G R GE++ ++ +M R G P+
Sbjct: 542 -RGEIKEARKLVN-EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
S NIL+ C G + EA + +EM ++G D+ +N++I G ++G+IE F++
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
++ G+ ++VTF L++ CK G V A L+ + ++ F P T +L++ + ++
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Query: 238 HSFN--DLMMG-FYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
HSF+ +++G +GE + I+ + +M+ G V + +M + G + +L
Sbjct: 109 HSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRL 168
Query: 295 WEEMR-VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
EMR V +YN ++ + A F +M + TF ++ +C
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
V ++DSA+ + +DM + P + LI L + RV+EAL+++ M + P
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE-MFLMGCVPDA 287
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+++ +I LC+ ++ EA K+ +M +GF PD Y + G K+G A L
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 474 MSRTQ 478
+ + +
Sbjct: 348 IPKPE 352
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 184/369 (49%), Gaps = 24/369 (6%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLL 150
D ++++T++H L +A++++ + C D C + LL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 151 KTYR--QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
+ + +F+ +I S + + ++ ++++ + ++GI P + T N LI+C+
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN- 305
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
YG + + L + ++ P+V +FN L+ F+++G++ E++ EM +
Sbjct: 306 ------YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
P+ +YN+L+ FC ++ EA+++++ M K ++ YNT+I GF K ++E E
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
F+EM G+ N+VT+ +I G+ + GD DSA +V+K M+ + T +L+ GLC
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
++ AL I + ++ + Y +I+ +C+ G++ EA L ++ K PD+
Sbjct: 480 SYGKLDTALVIFK-YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDV 535
Query: 449 KIYDAFIEG 457
Y+ I G
Sbjct: 536 VTYNTMISG 544
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 171/393 (43%), Gaps = 25/393 (6%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSI---------------IKSALVSRCLFDCNNAPVKF 145
HDLY+YS ++ R AL++ + S L C + V
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
+ +++ + D+ F F LI K ++ +V + RG P + T +++ +
Sbjct: 176 VDQMVEMGYKPDT--FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
K G L + R++ +V FN ++ + +E+ +++ EME
Sbjct: 234 CK-------RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
G PN+ +YN L+ C G+ +A +L M K + +V +N +I F+K G++ +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
AE+ +EM ++ +++T+ LING+C +D A ++K M+ KD P T LI
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
G C+ KRV + +E+ R M + +Y +I+ + G + A + +M
Sbjct: 407 GFCKCKRVEDGVELFRE-MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 446 PDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
D+ Y + G G A + + +++
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 147/343 (42%), Gaps = 31/343 (9%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAK--------------- 207
F+ L+ + ++ K + I + +++ GIS + T ++ I+C +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 208 --------------CKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
G C I + L D ++ +PD +F L+ G + +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRI-SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
+ ++M + GC P+L +Y ++ C G + A L +M ++ +V +NTI
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I K +E A + F EME G+ N VT+ LIN C G A + +ML+K
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
P T LI+ ++ ++ EA E + M S P +Y LLI C +++EA
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEA-EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 434 KLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
++ M K P+++ Y+ I G+ K + L EMS+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 143/304 (47%), Gaps = 10/304 (3%)
Query: 172 ELKKIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSK 230
++ K+D ++++ M++SR P I N L+S VAK F + L +
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNK-------FELVISLGEQMQT 111
Query: 231 VRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMRE 290
+ + D+++++ + F R ++ + V +M + G P++ + + L+ +C ++ +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 291 AEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLIN 350
A L ++M G + D + T+I G + + +A +M G + + VT+ ++N
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC 410
G CK GD+D A+ + M + +I+ LC+ + V A+++ M
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF-TEMETKGIR 290
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
P+ +Y LI LC G+ +A +L + M K P++ ++A I+ + K G A L
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 471 IMEM 474
EM
Sbjct: 351 HEEM 354
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 31/262 (11%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
R D ++LLI ++D + ++ + + S+ P I+T N LI+ KCK
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 214 GYGIFREI-------------------FGLRDGDSKV---------RLRPDVHSFNDLMM 245
G +FRE+ F D DS R+ D+ +++ L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 246 GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
G G+++ ++ +++ N++ YN ++ C GK+ EA L+ + +K
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP--- 533
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
DV YNT+I G +++A++ F++M+ G NS T+ LI + D ++ +
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 366 KDMLQKDFRPEASTIGMLIEGL 387
K+M F +ASTI ++ L
Sbjct: 594 KEMRSSGFVGDASTISLVTNML 615
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 184/377 (48%), Gaps = 36/377 (9%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIK--------------SALVS-----RCLFDCNNA 141
HDLYSY+ +++ L R V ALS++ S+L++ +FD +
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 142 PVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLL 201
K EM + +++ +I ++ ++ ++E+ + G+ T N L
Sbjct: 162 VSKMEEMGFR------PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 202 ISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWN 261
++ + C G + +RD + P+V +F ++ F ++G+ +++
Sbjct: 216 VAGLC-CSGRWSDAARLMRDMVMRD------IVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 262 EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
EM R P++++YN L+ C G++ EA+++ + M KG DV YNT+I GF KS
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIG 381
++++ + F+EM G+ +++T+ +I GY + G D+A ++ M D RP T
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYS 385
Query: 382 MLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAG 441
+L+ GLC RV +AL + N M+ +Y ++I +C+ G +E+A L ++
Sbjct: 386 ILLYGLCMNWRVEKALVLFEN-MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 442 KGFEPDLKIYDAFIEGY 458
KG +PD+ Y I G+
Sbjct: 445 KGLKPDVVSYTTMISGF 461
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 8/301 (2%)
Query: 174 KKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL 233
K D I + + GI + + N++I+C+ +C + ++ K
Sbjct: 83 KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM-------KFGY 135
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
PDV + + L+ GF + + ++ ++ME G P++ YN ++ C G + +A +
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L++ M G+R D YN+++ G SG+ A ++M + + N +TF +I+ +
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K G A+ +Y++M ++ P+ T LI GLC RV EA +++ + M P
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML-DLMVTKGCLPDV 314
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+Y LI C+ +++E KL +MA +G D Y+ I+GY + G A +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 474 M 474
M
Sbjct: 375 M 375
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 38/346 (10%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ ++++I + ++ +V + G P + T + LI+ G C G +F
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN------GFCQGNRVFDA 158
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
I L ++ RPDV +N ++ G + G + E+++ MER G + +YN L+A
Sbjct: 159 I-DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C G+ +A +L +M ++ + +V + +I F K G+ +A + ++EM V+
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ T+ LING C G VD A + M+ K P+ T LI G C+ KRV E ++
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 401 R---------------------------NAMRDV----SFCPSRKSYELLIKRLCEDGQM 429
R +A +++ P+ ++Y +L+ LC + ++
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRV 397
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
E+AL L M E D+ Y+ I G K+GN + A L +S
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D++S+N ++ R + V +M +FG P++ + + L+ FC ++ +A L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+M G R DV YNTII G K G + A E F ME GV +++VT+ L+ G C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G A + +DM+ +D P T +I+ ++ + SEA+++ R P +
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFT 281
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
Y LI LC G+++EA ++ M KG PD+ Y+ I G+ K L EM+
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 476 R 476
+
Sbjct: 342 Q 342
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 118/224 (52%), Gaps = 10/224 (4%)
Query: 152 TYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGS 211
T R D F ++ LI ++D + +++ ++ ++G P + T N LI+ K K
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 212 CAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPN 271
G +FRE+ ++ L D ++N ++ G+++ G + +E+++ M+ PN
Sbjct: 331 DEGTKLFREM-------AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPN 380
Query: 272 LYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
+ +Y+IL+ C ++ +A L+E M+ + LD+T YN +I G K G +E A + F+
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP 375
+ G++ + V++ +I+G+C+ D + L+Y+ M + P
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 186/404 (46%), Gaps = 78/404 (19%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
D++ Y++++ LS+A+ +A S + V+ E LK F
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFL----------------VEMVENGLK------PNAF 523
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKG----SCAGYG- 216
+ I +E + + + V+ +R G+ P C LI+ K KG +C+ Y
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK-KGKVIEACSAYRS 582
Query: 217 -IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
+ + I G D ++ LM G +++ +++ EE++ EM G P+++SY
Sbjct: 583 MVDQGILG------------DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
+L+ F G M++A +++EM +GL +V YN ++GGF +SG+IEKA+E EM +
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
G+ N+VT+ +I+GYCK GD+ A ++ +M K P++ L++G C V
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 396 ALEI---------------------------------IRNAMRDVSFC----PSRKSYEL 418
A+ I + N + D SF P+ +Y +
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+I LC++G +E A +L +M P + Y + + GY K+G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
RP+V + L+ F ++ V EM+ G P+++ YN L+ +M EA
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
EM GL+ + Y I G+ ++ + A+++ KEM GV N V LIN YC
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K G V A Y+ M+ + +A T +L+ GL + +V +A EI R MR P
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE-MRGKGIAPDV 627
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
SY +LI + G M++A + +M +G P++ IY+ + G+ + G + A L+ E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 474 MS 475
MS
Sbjct: 688 MS 689
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 158/377 (41%), Gaps = 64/377 (16%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ +D+LI ++K+++ + ++ + S G+S T +LLI + K + + A G+ E
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 221 IF----------------------------GLRDGDSKVRLRPDVHSFNDLMMGFYRDGE 252
+ L DG L P ++ L+ G+ R+
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+ E+ EM++ V + Y+Y ++ C G + A + +EM G R +V Y T
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I F ++ + A KEM+ G+ + + LI G K +D A +M++
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 373 FRPEASTIGMLIEG-----------------------------------LCEKKRVSEAL 397
+P A T G I G C+K +V EA
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
R +M D K+Y +L+ L ++ ++++A ++ +M GKG PD+ Y I G
Sbjct: 578 SAYR-SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 458 YKKLGNDQMAATLIMEM 474
+ KLGN Q A+++ EM
Sbjct: 637 FSKLGNMQKASSIFDEM 653
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 166/380 (43%), Gaps = 27/380 (7%)
Query: 109 IVHILSRARLKVQAL----------SIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDS 158
+V LSR ++ + AL + K + +FD VK + ML+ + + +
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFD-----VKTYHMLIIAHCRAGN 236
Query: 159 APFVFDLLIKSCLELK----KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAG 214
D+L K+ E + +DG++++ + +G+ P T ++LI + K K
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296
Query: 215 YGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYS 274
+ E+ + + D H+++ L+ G + + + + +EM G Y
Sbjct: 297 KSLLVEM-------DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
Y+ + + EG M +A+ L++ M GL AY ++I G+ + + + E EM+
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
+ + T+ ++ G C GD+D A + K+M+ RP LI+ + R
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAF 454
+A+ +++ M++ P Y LI L + +M+EA +M G +P+ Y AF
Sbjct: 470 DAMRVLKE-MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 455 IEGYKKLGNDQMAATLIMEM 474
I GY + A + EM
Sbjct: 529 ISGYIEASEFASADKYVKEM 548
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 227 GDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM-----ERFGCVPNLYSYNILMAL 281
G +K FN L+ ++ G+ E+ EV N + +RFG PN +YNI++
Sbjct: 756 GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDY 814
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C EG + A++L+ +M+ L V Y +++ G+ K G+ + F E G+E +
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA-----STIGMLIEGLCEKKRVSEA 396
+ + +IN + K G A+++ M K+ + ST L+ G + + A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 397 LEIIRNAMRDVSFCPSRKSYELLIKRLC 424
+++ N +R + + P + LI C
Sbjct: 935 EKVMENMVR-LQYIPDSATVIELINESC 961
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 160/311 (51%), Gaps = 9/311 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ +I S + ++ ++ + + + GI P + L++ G C G +R+
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN------GLCNS-GRWRDA 231
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
L G +K +++PDV +FN L+ F ++G+ EE++NEM R PN+++Y L+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
FC EG + EA +++ M KG DV AY ++I GF K +++ A + F EM G+ N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
++T+ LI G+ +VG + A V+ M+ + P T +L+ LC +V +AL I
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 402 NAMRDV--SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
+ + P+ +Y +L+ LC +G++E+AL + M + + + Y I+G
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 460 KLGNDQMAATL 470
K G + A L
Sbjct: 472 KAGKVKNAVNL 482
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 142/312 (45%), Gaps = 8/312 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F L+ ++KK D I + L+ G+S + TCNLL++C + ++
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K+ PD+ +F L+ GF ME + N+M G P++ Y ++
Sbjct: 135 -------KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C G + A L+++M G+R DV Y +++ G SG+ A+ + M ++ +
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
+TF LI+ + K G A +Y +M++ P T LI G C + V EA ++
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY- 306
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
M P +Y LI C+ ++++A+K+ +M+ KG + Y I+G+ ++G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 463 NDQMAATLIMEM 474
+A + M
Sbjct: 367 KPNVAQEVFSHM 378
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 36/294 (12%)
Query: 218 FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNI 277
F E L + R P + F L+ + + +++ + + ++ G +LY+ N+
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 278 LMALFCGE-----------------------------------GKMREAEKLWEEMRVKG 302
LM FC +M EA + +M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI 362
++ DV Y TII K+G + A F +ME G+ + V + L+NG C G A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 363 LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKR 422
+ + M ++ +P+ T LI+ ++ + +A E+ N M +S P+ +Y LI
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELY-NEMIRMSIAPNIFTYTSLING 291
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
C +G ++EA ++ M KG PD+ Y + I G+ K A + EMS+
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 127/254 (50%), Gaps = 14/254 (5%)
Query: 159 APFVF---DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
AP +F L+ C+E +D + ++ ++ ++G P + LI+ KCK
Sbjct: 279 APNIFTYTSLINGFCME-GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
IF E+ S+ L + ++ L+ GF + G+ + +EV++ M G PN+ +Y
Sbjct: 338 KIFYEM-------SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 276 NILMALFCGEGKMREAEKLWEEMR---VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
N+L+ C GK+++A ++E+M+ + G+ ++ YN ++ G +G++EKA F++
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
M ++ +T+ +I G CK G V +A+ ++ + K +P T +I GL +
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Query: 393 VSEALEIIRNAMRD 406
EA + R D
Sbjct: 511 KHEAHVLFRKMKED 524
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 116/238 (48%), Gaps = 12/238 (5%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ C + + F L++T + C + LI + KK+D +++I + +G++
Sbjct: 293 CMEGCVDEARQMF-YLMET-KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
T LI G + +E+F + P++ ++N L+ +G++
Sbjct: 351 NTITYTTLIQGF----GQVGKPNVAQEVFSHMVSRG---VPPNIRTYNVLLHCLCYNGKV 403
Query: 254 E---MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
+ MI E + E G PN+++YN+L+ C GK+ +A ++E+MR + + + + Y
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
II G K+G+++ A F + GV+ N VT+ +I+G + G A ++++ M
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 26/248 (10%)
Query: 91 FTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLL 150
F L + C D+ +Y+++++ + + A+ I F+EM
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI-------------------FYEM-- 343
Query: 151 KTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKG 210
+ + + LI+ ++ K + + E+ + SRG+ P IRT N+L+ C+
Sbjct: 344 -SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 211 SCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
IF ++ R+ D + P++ ++N L+ G +G++E V+ +M +
Sbjct: 403 VKKALMIFEDM-QKREMDG---VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
+ +Y I++ C GK++ A L+ + KG++ +V Y T+I G ++ G +A F
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 331 KEMELGGV 338
++M+ GV
Sbjct: 519 RKMKEDGV 526
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 201/444 (45%), Gaps = 41/444 (9%)
Query: 29 PPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKT--LTPIHFSQIALQLKSNPHLAL 86
PP+D + I ++S S + L STKT TP + + +L ++ AL
Sbjct: 21 PPADSAAIAKLILS------SPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGPKAL 74
Query: 87 RFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFF 146
+FF F ++ +HD S+ + I +R L S+I
Sbjct: 75 QFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR------------------ 116
Query: 147 EMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
+++ R +P F ++ + K D ++++ + G + + N ++ +
Sbjct: 117 ---MRSLR-IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
K K Y +FR + G R D ++N ++ G+ EV EM
Sbjct: 173 KSKRVEKAYELFRALRG--------RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G PNL +YN ++ F G++R A + + EM+ + +DV Y T++ GF +G+I++A
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
F EM GV + T+ +I CK +V++A++++++M+++ + P +T +LI G
Sbjct: 285 RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 344
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
L S E+++ M + P+ ++Y ++I+ E ++E+AL L KM P
Sbjct: 345 LFHAGEFSRGEELMQR-MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 447 DLKIYDAFIEG--YKKLGNDQMAA 468
+L Y+ I G +K D + A
Sbjct: 404 NLDTYNILISGMFVRKRSEDMVVA 427
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 189/409 (46%), Gaps = 44/409 (10%)
Query: 1 MATSIVKHFFLSPPKPIKAYHLYSSASTPPSDQSHIVSTVVSLLIH-HRSKSRWTNLRSL 59
+ S++K + PK ++ +H + + + + H + W SL
Sbjct: 58 LVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVW----SL 113
Query: 60 LYSTKTL----TPIHFSQIALQLKS--NPHLALRFFFFTLDNSSLCLHDLYSYSTIVHIL 113
++ ++L +P F+ +A + S P A++ F ++ C DL S++TI+ +L
Sbjct: 114 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHG--CFQDLASFNTILDVL 171
Query: 114 SRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLEL 173
+++ +A + + AL R D +++++ +
Sbjct: 172 CKSKRVEKAYELFR-ALRGRFSVDT----------------------VTYNVILNGWCLI 208
Query: 174 KKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL 233
K+ ++E+++ + RGI+P + T N ++ + + F E ++ D ++
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLE---MKKRDCEI-- 263
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
DV ++ ++ GF GE++ V++EM R G +P++ +YN ++ + C + + A
Sbjct: 264 --DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
++EEM +G +VT YN +I G + +G+ + EE + ME G E N T+ +I Y
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
+ +V+ A+ +++ M D P T +LI G+ +KR SE + + N
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR-SEDMVVAGN 429
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
TF + Y G D A+ ++ +M + + ++ +++ LC+ KRV +A E+ R A
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-A 186
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
+R F +Y +++ C + +AL++ +M +G P+L Y+ ++G+ + G
Sbjct: 187 LRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 464 DQMAATLIMEMSR 476
+ A +EM +
Sbjct: 246 IRHAWEFFLEMKK 258
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 144/286 (50%), Gaps = 10/286 (3%)
Query: 174 KKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL 233
K+ + ++ + L GI+ I T N++I+C +C +C Y + ++ K+
Sbjct: 92 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM-------KLGY 144
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
PD +FN L+ G + +G++ + + M GC P++ +YN ++ C G A
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L +M + ++ DV Y+TII + G I+ A FKEME G++S+ VT+ L+ G C
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM-RDVSFCPS 412
K G + L+ KDM+ ++ P T +L++ ++ ++ EA E+ + + R +S P+
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS--PN 322
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+Y L+ C ++ EA + M PD+ + + I+GY
Sbjct: 323 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 368
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 184/379 (48%), Gaps = 36/379 (9%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDS 158
C D+ +Y++IV+ + R+ AL +++ K E R +
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLR----------------KMEE------RNVKA 216
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
F + +I S ID +I + + + ++GI + T N L+ +G C
Sbjct: 217 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV------RGLCKAGKWN 270
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
L+D S+ + P+V +FN L+ F ++G+++ E++ EM G PN+ +YN L
Sbjct: 271 DGALLLKDMVSR-EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 329
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
M +C + ++ EA + + M D+ + ++I G+ +++ + F+ + G+
Sbjct: 330 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 389
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
+N+VT+ L+ G+C+ G + A ++++M+ P+ T G+L++GLC+ ++ +ALE
Sbjct: 390 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 449
Query: 399 IIRNAMR---DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
I + + D+ Y +I+ +C+ G++E+A L + KG +P++ Y I
Sbjct: 450 IFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 505
Query: 456 EGYKKLGNDQMAATLIMEM 474
G K G+ A L+ +M
Sbjct: 506 SGLCKKGSLSEANILLRKM 524
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 184/379 (48%), Gaps = 29/379 (7%)
Query: 102 DLYSYSTIVHILSRARLKVQALSI--------IKSALVS-----RCLFDCNNAPVKFFEM 148
D+++YSTI+ L R A+S+ IKS++V+ R L C +
Sbjct: 217 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL--CKAGKWNDGAL 274
Query: 149 LLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
LLK + P V F++L+ ++ K+ + E+ + + +RGISP I T N L+
Sbjct: 275 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD--- 331
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
G C E + D + + PD+ +F L+ G+ ++ +V+ + +
Sbjct: 332 ---GYCM-QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 387
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G V N +Y+IL+ FC GK++ AE+L++EM G+ DV Y ++ G +G++EKA
Sbjct: 388 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 447
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
E F++++ ++ V + +I G CK G V+ A ++ + K +P T ++I G
Sbjct: 448 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 507
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
LC+K +SEA I+ M + P+ +Y LI+ DG + + KL +M GF
Sbjct: 508 LCKKGSLSEA-NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 566
Query: 447 DLK----IYDAFIEGYKKL 461
D + D + K+L
Sbjct: 567 DASSIKMVIDMLLSAMKRL 585
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 155/317 (48%), Gaps = 8/317 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
F+ LIK K+ ++ +V + G P + T N +++ + + + + R++
Sbjct: 150 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 209
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ ++ DV +++ ++ RDG ++ ++ EME G ++ +YN L+
Sbjct: 210 -------EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C GK + L ++M + + +V +N ++ F K G++++A E +KEM G+ N
Sbjct: 263 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+T+ L++GYC + A + M++ P+ T LI+G C KRV + +++ R
Sbjct: 323 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 382
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
N + + +Y +L++ C+ G+++ A +L +M G PD+ Y ++G
Sbjct: 383 NISKR-GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441
Query: 462 GNDQMAATLIMEMSRTQ 478
G + A + ++ +++
Sbjct: 442 GKLEKALEIFEDLQKSK 458
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 120/259 (46%), Gaps = 36/259 (13%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG---------- 284
P + F+ R + ++ + ++E G N+Y+ NI++ FC
Sbjct: 76 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135
Query: 285 -------------------------EGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
EGK+ EA L + M G + DV YN+I+ G +
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
SG A + ++ME V+++ T+ +I+ C+ G +D+AI ++K+M K + T
Sbjct: 196 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
L+ GLC+ + ++ ++++ M P+ ++ +L+ ++G+++EA +L +M
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKD-MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 314
Query: 440 AGKGFEPDLKIYDAFIEGY 458
+G P++ Y+ ++GY
Sbjct: 315 ITRGISPNIITYNTLMDGY 333
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 182/390 (46%), Gaps = 27/390 (6%)
Query: 101 HDLYSYSTIVHILSRARL---------KVQALSIIKSALVSRCLFD--CNNAPVKFFEML 149
HDLYS++ ++H R K+ L S + L + C + L
Sbjct: 641 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 700
Query: 150 LKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAK 207
+ + P +++ +I + + ++ ++E+ + +GI T N LIS ++
Sbjct: 701 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 760
Query: 208 CKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG 267
+ R++ K ++ P+V F L+ F ++G + ++ EM R
Sbjct: 761 SGRWTDAARLLRDMV-------KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 813
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
VPN+++YN L+ FC G + +A+ +++ M KG DV YNT+I GF KS ++E
Sbjct: 814 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 873
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
+ F EM G+ ++ T+ LI+GYC+ G ++ A V+ M+ P+ T +L++ L
Sbjct: 874 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 933
Query: 388 CEKKRVSEALEIIRNAMR---DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
C ++ +AL ++ + + DV +Y ++I+ LC +++EA L + KG
Sbjct: 934 CNNGKIEKALVMVEDLQKSEMDVDII----TYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 989
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+PD Y I G + G + A L M
Sbjct: 990 KPDAIAYITMISGLCRKGLQREADKLCRRM 1019
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 185/389 (47%), Gaps = 25/389 (6%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIK---------------SALVSRCLFDCNNAPVKF 145
HDLYS++ ++H R ALS++ S L CL N F
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV--NRIGDAF 161
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
++L + V++ LI + +++ ++E++ + +G+ + T N L++ +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
+ R++ K + PDV +F L+ F + G ++ +E++ EM +
Sbjct: 222 CYSGRWSDAARMLRDMM-------KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
PN +YN ++ C G++ +A+K ++ M KG +V YNT+I GF K +++
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
+ F+ M G ++ T+ LI+GYC+VG + A+ ++ M+ + P+ T +L+
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
GLC + AL + + MR+ +Y ++I LC+ ++E+A +L ++ +G +
Sbjct: 395 GLCVNGEIESAL-VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 446 PDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
PD + Y I G K G + A LI M
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 161/363 (44%), Gaps = 32/363 (8%)
Query: 145 FFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
FFEM+ + Q + F L+ + L++ + I + + GIS + + +LI C
Sbjct: 59 FFEMV---HSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHC 115
Query: 205 VAKC------------------KGSCAGYGIFREIFGL--RDGDS--------KVRLRPD 236
+C + S +G F L R GD+ K P+
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPN 175
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
V +N L+ G ++GE+ + E+ NEME+ G ++ +YN L+ C G+ +A ++
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
+M + + DV + +I F K G +++A+E +KEM V+ N+VT+ +ING C G
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+ A + M K P T LI G C+ + V E +++ + M F +Y
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR-MSCEGFNADIFTY 354
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
LI C+ G++ AL + M + PD+ + + G G + A +M
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 477 TQK 479
++K
Sbjct: 415 SEK 417
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 148/332 (44%), Gaps = 15/332 (4%)
Query: 145 FFEMLLKTYRQCDSAPFVFDL--LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
F EML Q P + D ++ ++ K D I + + + GIS + + +LI
Sbjct: 596 FCEML-----QSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 650
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
C +C + ++ K+ RP + + L+ GF + + + +
Sbjct: 651 HCFCRCSRLSLALALLGKMM-------KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 703
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M+ FG VPN+ YN ++ C + A +++ M KG+R D YNT+I G SG+
Sbjct: 704 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 763
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
A ++M ++ N + F LI+ + K G++ A +YK+M+++ P T
Sbjct: 764 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 823
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
LI G C + +A + + + M P +Y LI C+ ++E+ +KL +M +
Sbjct: 824 LINGFCIHGCLGDA-KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 882
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
G D Y+ I GY + G +A + M
Sbjct: 883 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 914
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 131/266 (49%), Gaps = 12/266 (4%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS--CVAKCKGS 211
R+ D F LI + ++ + + + + + R + P + T N LI+ C+ C G
Sbjct: 777 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 836
Query: 212 CAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPN 271
+ +F L PDV ++N L+ GF + +E +++ EM G V +
Sbjct: 837 A------KYMFDLMVSKGCF---PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 887
Query: 272 LYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
++YN L+ +C GK+ A+K++ M G+ D+ YN ++ +G+IEKA +
Sbjct: 888 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 947
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
+++ ++ + +T+ +I G C+ + A +++ + +K +P+A +I GLC K
Sbjct: 948 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1007
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYE 417
EA ++ R M++ F PS + Y+
Sbjct: 1008 LQREADKLCRR-MKEDGFMPSERIYD 1032
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 1/208 (0%)
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
+P++ + ++ + K L+ +M G+ D+ ++ +I F + ++ A
Sbjct: 605 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 664
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
+M G + VT L+NG+C+ A+ + M F P +I GLC
Sbjct: 665 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 724
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ + ++ ALE+ M +Y LI L G+ +A +L M + +P++
Sbjct: 725 KNRDLNNALEVFY-CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 783
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+ A I+ + K GN A L EM R
Sbjct: 784 IFFTALIDTFVKEGNLLEARNLYKEMIR 811
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 98/232 (42%), Gaps = 29/232 (12%)
Query: 89 FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEM 148
+ F L S C D+ +Y+T++ +++ + + F EM
Sbjct: 839 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL-------------------FCEM 879
Query: 149 LLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
TY+ F ++ LI + K++ + ++ + G+SP I T N+L+ C+
Sbjct: 880 ---TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL--- 933
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
C I + + + D K + D+ ++N ++ G R +++ ++ + R G
Sbjct: 934 ---CNNGKIEKALVMVEDL-QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 989
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS 320
P+ +Y +++ C +G REA+KL M+ G Y+ + Y S
Sbjct: 990 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 1041
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 203/418 (48%), Gaps = 37/418 (8%)
Query: 61 YSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRA---R 117
Y +K L P ++ +L +NPH+ RF+ F+ ++ H ++Y+ + L +A
Sbjct: 62 YLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNI-RHSFWTYNLLTRSLCKAGLHD 120
Query: 118 LKVQALSIIKSALVSRCLFDCNNAPVKFF--------------EMLLKTYRQCDSAPFVF 163
L Q +KS VS NN + F +LL+++ + + V
Sbjct: 121 LAGQMFECMKSDGVSP-----NNRLLGFLVSSFAEKGKLHFATALLLQSF-EVEGCCMVV 174
Query: 164 DLLIKSCLELKKIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
+ L+ + ++L +++ ++++ LR + + +T N+LI +G C G G +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILI------RGLC-GVGKAEKAL 226
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG-CVPNLYSYNILMAL 281
L S PD+ ++N L+ GF + E+ E++ +++ C P++ +Y +++
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
+C GKMREA L ++M G+ +N ++ G+ K+G++ AEE +M G +
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
VTF LI+GYC+VG V ++++M + P A T +LI LC + R+ +A E++
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 402 N-AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
A +D+ P Y +I C+ G++ EA + +M K +PD + I G+
Sbjct: 407 QLASKDI--IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K+ +R ++N L + G ++ +++ M+ G PN L++ F +GK+
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 290 EAEKLW-EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
A L + V+G + V N+++ K ++E A + F E +++ TF L
Sbjct: 156 FATALLLQSFEVEGCCMVV---NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS 408
I G C VG + A+ + M P+ T LI+G C+ +++A E+ ++
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
P +Y +I C+ G+M EA L M G P ++ ++GY K G
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 293 KLWEEMRVK-GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+ WE R K +R YN + K+G + A + F+ M+ GV N+ L++
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEAS--TIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+ + G + A +L + F E + L+ L + RV +A+++ +R S
Sbjct: 148 FAEKGKLHFATA----LLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQS- 202
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
C K++ +LI+ LC G+ E+AL+L M+G G EPD+ Y+ I+G+ K
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 203/418 (48%), Gaps = 37/418 (8%)
Query: 61 YSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRA---R 117
Y +K L P ++ +L +NPH+ RF+ F+ ++ H ++Y+ + L +A
Sbjct: 62 YLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNI-RHSFWTYNLLTRSLCKAGLHD 120
Query: 118 LKVQALSIIKSALVSRCLFDCNNAPVKFF--------------EMLLKTYRQCDSAPFVF 163
L Q +KS VS NN + F +LL+++ + + V
Sbjct: 121 LAGQMFECMKSDGVSP-----NNRLLGFLVSSFAEKGKLHFATALLLQSF-EVEGCCMVV 174
Query: 164 DLLIKSCLELKKIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
+ L+ + ++L +++ ++++ LR + + +T N+LI +G C G G +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILI------RGLC-GVGKAEKAL 226
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG-CVPNLYSYNILMAL 281
L S PD+ ++N L+ GF + E+ E++ +++ C P++ +Y +++
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
+C GKMREA L ++M G+ +N ++ G+ K+G++ AEE +M G +
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
VTF LI+GYC+VG V ++++M + P A T +LI LC + R+ +A E++
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 402 N-AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
A +D+ P Y +I C+ G++ EA + +M K +PD + I G+
Sbjct: 407 QLASKDI--IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K+ +R ++N L + G ++ +++ M+ G PN L++ F +GK+
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH 155
Query: 290 EAEKLW-EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
A L + V+G + V N+++ K ++E A + F E +++ TF L
Sbjct: 156 FATALLLQSFEVEGCCMVV---NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS 408
I G C VG + A+ + M P+ T LI+G C+ +++A E+ ++
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
P +Y +I C+ G+M EA L M G P ++ ++GY K G
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 293 KLWEEMRVK-GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+ WE R K +R YN + K+G + A + F+ M+ GV N+ L++
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEAS--TIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+ + G + A +L + F E + L+ L + RV +A+++ +R S
Sbjct: 148 FAEKGKLHFATA----LLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQS- 202
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
C K++ +LI+ LC G+ E+AL+L M+G G EPD+ Y+ I+G+ K
Sbjct: 203 CNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 158/312 (50%), Gaps = 8/312 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
+ LI+ + + ++ ++E+ + + G P + T N L++ + + + R++
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K R+ P+V +F L+ F + G++ +E++N M + P++++Y L+
Sbjct: 251 -------KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C G + EA +++ M G + Y T+I GF KS ++E + F EM GV +N+
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
+T+ LI GYC VG D A V+ M + P+ T +L++GLC +V +AL I
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE- 422
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
MR + +Y ++I+ +C+ G++E+A L + KG +P++ Y I G+ + G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 463 NDQMAATLIMEM 474
A +L +M
Sbjct: 483 LIHEADSLFKKM 494
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 8/313 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F L+ ++ + D I + ++ GI P + TCN+++ CV C ++
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K+ PD+ +F L+ G+ +E +++++ G PN+ +Y L+
Sbjct: 146 -------KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCL 198
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C + A +L+ +M G R +V YN ++ G + G+ A ++M +E N
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
+TF LI+ + KVG + A +Y M+Q P+ T G LI GLC + EA ++
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
R+ + P+ Y LI C+ ++E+ +K+ +M+ KG + Y I+GY +G
Sbjct: 319 MERNGCY-PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 463 NDQMAATLIMEMS 475
+A + +MS
Sbjct: 378 RPDVAQEVFNQMS 390
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
R+ + F LI + +++ K+ + E+ ++ + P + T LI+ G C
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN------GLCM 305
Query: 214 GYGIF---REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
YG+ R++F L + + P+ + L+ GF + +E +++ EM + G V
Sbjct: 306 -YGLLDEARQMFYLMERNG---CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
N +Y +L+ +C G+ A++++ +M + D+ YN ++ G +G++EKA F
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
+ M ++ N VT+ +I G CK+G V+ A ++ + K +P T +I G C +
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYE 417
+ EA + + M++ F P+ Y+
Sbjct: 482 GLIHEADSLFKK-MKEDGFLPNESVYK 507
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
+P++ + L+++ + L+E+M++ G+ + N ++ S Q +A
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
F +M G E + VTF L+NGYC ++ AI ++ +L F+P T LI LC
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ + ++ A+E+ N M P+ +Y L+ LCE G+ +A L M + EP++
Sbjct: 200 KNRHLNHAVELF-NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 449 KIYDAFIEGYKKLG 462
+ A I+ + K+G
Sbjct: 259 ITFTALIDAFVKVG 272
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREA 291
R P + F L+ + +++ ++ +M+ G P L + NI+M C + A
Sbjct: 78 RPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA 137
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+M G D+ + +++ G+ +IE A F ++ G + N VT+ LI
Sbjct: 138 SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC 197
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
CK ++ A+ ++ M RP T L+ GLCE R +A ++R+ M+ P
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEP 256
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ ++ LI + G++ EA +L M PD+ Y + I G
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 155/295 (52%), Gaps = 8/295 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
++ +I S + K+++ + + + + +GI P + T L++ + + ++
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K ++ P+V +++ L+ F ++G++ +E++ EM R P++ +Y+ L+
Sbjct: 253 -------KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C ++ EA ++++ M KG DV +YNT+I GF K+ ++E + F+EM G+ SN+
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
VT+ LI G+ + GDVD A + M P+ T +L+ GLC+ + +AL I +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
M+ +Y +I+ +C+ G++EEA L ++ KG +PD+ Y + G
Sbjct: 426 -MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 133/264 (50%), Gaps = 24/264 (9%)
Query: 189 RGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFY 248
+ I+P + T + L+ K +F E+ ++ + PD+ +++ L+ G
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-------RMSIDPDIVTYSSLINGLC 306
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
++ ++++ M GC+ ++ SYN L+ FC ++ + KL+ EM +GL +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
YNT+I GF+++G ++KA+EFF +M+ G+ + T+ L+ G C G+++ A+++++DM
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC--------PSRKSYELLI 420
+++ + T +I G+C+ +V EA + FC P +Y ++
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSL---------FCSLSLKGLKPDIVTYTTMM 477
Query: 421 KRLCEDGQMEEALKLQAKMAGKGF 444
LC G + E L KM +G
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGL 501
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 168/371 (45%), Gaps = 39/371 (10%)
Query: 140 NAPVKFFEMLLKTYRQCDSAPFV----FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
N + F ++K S PF F+ L+ + ++LKK D I + + + GI +
Sbjct: 67 NDAIDLFSDMVK------SRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 196 RTCNLLISCVAKC-KGSCA----------GYGIFREIFG-----------------LRDG 227
T N++I+C C + S A GY R G L D
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 228 DSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGK 287
++ +PD+ ++N ++ + + + + E+ER G PN+ +Y L+ C +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 288 MREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
+A +L +M K + +V Y+ ++ F K+G++ +A+E F+EM ++ + VT+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV 407
LING C +D A ++ M+ K + + LI G C+ KRV + +++ R M
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE-MSQR 359
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
+ +Y LI+ + G +++A + ++M G PD+ Y+ + G G + A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 468 ATLIMEMSRTQ 478
+ +M + +
Sbjct: 420 LVIFEDMQKRE 430
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 115/206 (55%), Gaps = 7/206 (3%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
+ID + ++ ++ S+G + + N LI+ K K G +FRE+ S+ L
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-------SQRGLV 362
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
+ ++N L+ GF++ G+++ +E +++M+ FG P++++YNIL+ C G++ +A +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+E+M+ + + LD+ Y T+I G K+G++E+A F + L G++ + VT+ +++G C
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTI 380
G + +Y M Q+ T+
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 9/232 (3%)
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
RD ++ +++++M + P++ +N L++ K L ++M V G+R D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
+N +I F Q+ A +M G E + VT L+NG+C+ V A+ + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEAL----EIIRNAMRDVSFCPSRKSYELLIKRLC 424
++ ++P+ +I+ LC+ KRV++A EI R +R P+ +Y L+ LC
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR-----PNVVTYTALVNGLC 236
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+ +A +L + M K P++ Y A ++ + K G A L EM R
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 115/300 (38%), Gaps = 74/300 (24%)
Query: 91 FTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLL 150
F L S CL D+ SY+T+++ +A+ + + F EM
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL-------------------FREM-- 356
Query: 151 KTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKG 210
+ R S ++ LI+ + +D + E + GISP I T N+L+
Sbjct: 357 -SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG------- 408
Query: 211 SCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
G +GE+E ++ +M++
Sbjct: 409 -----------------------------------GLCDNGELEKALVIFEDMQKREMDL 433
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
++ +Y ++ C GK+ EA L+ + +KGL+ D+ Y T++ G G + + E +
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
+M+ G+ N T GD+ + + K ML + P S + + G+C+K
Sbjct: 494 TKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAP--SLLKDIKSGVCKK 543
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 164/321 (51%), Gaps = 8/321 (2%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
R ++ + ++I S + D ++ + + +GI + T + LI +
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
G + RE+ G + PDV +F+ L+ F ++G++ +E++NEM G P+
Sbjct: 299 GAKMLREMIGRN-------IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
+YN L+ FC E + EA ++++ M KG D+ Y+ +I + K+ +++ F+E+
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
G+ N++T+ L+ G+C+ G +++A ++++M+ + P T G+L++GLC+ +
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
++ALEI M+ Y ++I +C ++++A L ++ KG +PD+ Y+
Sbjct: 472 NKALEIFEK-MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 454 FIEGYKKLGNDQMAATLIMEM 474
I G K G+ A L +M
Sbjct: 531 MIGGLCKKGSLSEADMLFRKM 551
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 199/436 (45%), Gaps = 25/436 (5%)
Query: 58 SLLYSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVH------ 111
S++ S TPI F+++ + L F + HD+Y+ + +++
Sbjct: 60 SMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKK 119
Query: 112 -------ILSRA-RLKVQALSIIKSALVSR-CLFDCNNAPVKFFEMLLKTYRQCDSAPFV 162
+L RA +L + +I S LV+ CL + V + +++ ++ D V
Sbjct: 120 KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVT-V 178
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
L+ CL+ + + + I RM+ G P T +++ + K S +FR++
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVE-YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM- 236
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
+ ++ V ++ ++ +DG + ++NEME G ++ +Y+ L+
Sbjct: 237 ------EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C +GK + K+ EM + + DV ++ +I F K G++ +A+E + EM G+ ++
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
+T+ LI+G+CK + A ++ M+ K P+ T +LI C+ KRV + + + R
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+ P+ +Y L+ C+ G++ A +L +M +G P + Y ++G G
Sbjct: 411 -ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 463 NDQMAATLIMEMSRTQ 478
A + +M +++
Sbjct: 470 ELNKALEIFEKMQKSR 485
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 164/366 (44%), Gaps = 48/366 (13%)
Query: 117 RLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKI 176
+ V SI+ +L FD +A F EM +K + + + LI K
Sbjct: 242 KASVVQYSIVIDSLCKDGSFD--DALSLFNEMEMKGIK---ADVVTYSSLIGGLCNDGKW 296
Query: 177 DGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPD 236
D +++R + R I P + T + LI K ++ E+ + PD
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-------TRGIAPD 349
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
++N L+ GF ++ + ++++ M GC P++ +Y+IL+ +C ++ + +L+
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
E+ KGL + YNT++ GF +SG++ A+E F+EM GV + VT+ L++G C G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 357 DVDSAILVYKDMLQ-----------------------------------KDFRPEASTIG 381
+++ A+ +++ M + K +P+ T
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 382 MLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAG 441
++I GLC+K +SEA + R M++ P +Y +LI+ + +++L +M
Sbjct: 530 VMIGGLCKKGSLSEADMLFRK-MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
Query: 442 KGFEPD 447
GF D
Sbjct: 589 CGFSAD 594
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 128/258 (49%), Gaps = 9/258 (3%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C +C + + F++++ + C+ + +LI S + K++D + + R + S+G+ P
Sbjct: 361 CKENCLHEANQMFDLMVS--KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
T N L+ + A +F+E+ + P V ++ L+ G +GE+
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRG-------VPPSVVTYGILLDGLCDNGEL 471
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
E++ +M++ + YNI++ C K+ +A L+ + KG++ DV YN +
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
IGG K G + +A+ F++M+ G + T+ LI + + S++ + ++M F
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Query: 374 RPEASTIGMLIEGLCEKK 391
++STI M+I+ L +++
Sbjct: 592 SADSSTIKMVIDMLSDRR 609
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 141/293 (48%), Gaps = 12/293 (4%)
Query: 187 RSRG-ISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
RS G + Q R N LI S G+F+E L ++ + P V +FN L+
Sbjct: 129 RSNGCVKLQDRYFNSLIR-------SYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLS 181
Query: 246 GFYRDGEMEMIEEVWNEMER-FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLR 304
+ G M ++++EM R +G P+ Y++N L+ FC + EA +++++M +
Sbjct: 182 ILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCN 241
Query: 305 LDVTAYNTIIGGFYKSGQIEKAEEFFKEM--ELGGVESNSVTFEHLINGYCKVGDVDSAI 362
DV YNTII G ++G+++ A M + V N V++ L+ GYC ++D A+
Sbjct: 242 PDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAV 301
Query: 363 LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRD-VSFCPSRKSYELLIK 421
LV+ DML + +P A T LI+GL E R E +I+ +F P ++ +LIK
Sbjct: 302 LVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIK 361
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
C+ G ++ A+K+ +M PD Y I A TL E+
Sbjct: 362 AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 169/400 (42%), Gaps = 97/400 (24%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF---R 219
F+ LI+S S+++ + ++ GISP + T N L+S + K + + +F R
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 220 EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILM 279
+G+ PD ++FN L+ GF ++ ++ ++ +ME + C P++ +YN ++
Sbjct: 201 RTYGVT---------PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 280 ALFCGEGKMREAEKLWEEMRVKGLRL--DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
C GK++ A + M K + +V +Y T++ G+ +I++A F +M G
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 338 VESNSVTFEHLING-------------------------------------YCKVGDVDS 360
++ N+VT+ LI G +C G +D+
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 361 AILVYKDMLQKDFRPEASTIGMLI------------------------------------ 384
A+ V+++ML P++++ +LI
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAA 431
Query: 385 ------EGLCEKKRVSEALEIIRNAM-RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQA 437
E LC + +A ++ R M R V PS Y+ LI C +G+ + A +L
Sbjct: 432 AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLITGHCREGKFKPAYELLV 488
Query: 438 KMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
M + F PDL+ Y+ I+G K+G +A + M R+
Sbjct: 489 LMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRS 528
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 5/313 (1%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
F++LIK+ + +D ++++ + + + + P + ++LI + +F E+
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
F K +P ++N + +G+ + E+V+ ++ + G V + SY L+
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITG 473
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C EGK + A +L M + D+ Y +I G K G+ A + + M
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPV 533
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+ TF ++ K + + + ML+K R ++ L + +A I+R
Sbjct: 534 ATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVR 593
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
+ D + E L+ LCE+ ++ +A L K D+ + IEG K
Sbjct: 594 -LLYDNGYLV---KMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKH 649
Query: 462 GNDQMAATLIMEM 474
A +L E+
Sbjct: 650 KRHSEAFSLYNEL 662
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 167/348 (47%), Gaps = 45/348 (12%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
+ ++I + +D + + + +G I T N LI G + R++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K ++ P+V +F+ L+ F ++G++ +++ EM + G PN +YN L+ F
Sbjct: 326 -------KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C E ++ EA ++ + M KG D+ +N +I G+ K+ +I+ E F+EM L GV +N+
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE---- 398
VT+ L+ G+C+ G ++ A ++++M+ + RP+ + +L++GLC+ + +ALE
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 399 --------------IIRNAMRDVS--------FCP--------SRKSYELLIKRLCEDGQ 428
II + M + S FC ++Y ++I LC
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ--MAATLIMEM 474
+ +A L KM +G PD Y+ I + LG+D AA LI EM
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAH--LGDDDATTAAELIEEM 604
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 165/357 (46%), Gaps = 31/357 (8%)
Query: 149 LLKTYRQCDSAPFVFDL--LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
L + Q P V D L + + K+ + + + + + S+GI+ I T +++I+C
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 207 KCK---------GSCAGYG------IFR-------------EIFGLRDGDSKVRLRPDVH 238
+C+ G G IF E L D ++ +P +
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
+ N L+ G +G++ + + M G PN +Y ++ + C G+ A +L +M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
+ ++LD Y+ II G K G ++ A F EME+ G +++ +T+ LI G+C G
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
D + +DM+++ P T +LI+ ++ ++ EA ++++ M+ P+ +Y
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNS 373
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
LI C++ ++EEA+++ M KG +PD+ ++ I GY K L EMS
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 147/289 (50%), Gaps = 11/289 (3%)
Query: 170 CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDS 229
CL K D + I RM+ + G P T +++ + K + + R++
Sbjct: 204 CLNGKVSDAVVLIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-------E 255
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
+ ++ D ++ ++ G +DG ++ ++NEME G ++ +YN L+ FC G+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
+ KL +M + + +V ++ +I F K G++ +A++ KEM G+ N++T+ LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN-AMRDVS 408
+G+CK ++ AI + M+ K P+ T +LI G C+ R+ + LE+ R ++R V
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV- 434
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ +Y L++ C+ G++E A KL +M + PD+ Y ++G
Sbjct: 435 -IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 143/295 (48%), Gaps = 8/295 (2%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
R+ F +LI S ++ K+ + ++++ + RGI+P T N LI G C
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID------GFCK 380
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
E + D PD+ +FN L+ G+ + ++ E++ EM G + N
Sbjct: 381 -ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
+YN L+ FC GK+ A+KL++EM + +R D+ +Y ++ G +G++EKA E F ++
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
E +E + + +I+G C VD A ++ + K + +A ++I LC K +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
S+A +I+ M + P +Y +LI+ D A +L +M GF D+
Sbjct: 560 SKA-DILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 150 LKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
L + CD F++LI + +ID +E+ R + RG+ T N L+ +
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 210 GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
+F+E+ R +RPD+ S+ L+ G +GE+E E++ ++E+
Sbjct: 453 KLEVAKKLFQEMVSRR-------VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
++ Y I++ C K+ +A L+ + +KG++LD AYN +I + + KA+
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
F++M G + +T+ LI + D +A + ++M F + ST+ M+I L
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 219/505 (43%), Gaps = 66/505 (13%)
Query: 14 PKPI--KAYHLYSSASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTP--- 68
PKPI Y+L + P S IV + S L H NLR K+L P
Sbjct: 26 PKPILNPLYNLLPQSQNP----SKIVDVICSTLNHSDYSVLLPNLRD---EVKSLIPHLG 78
Query: 69 -IHFSQIALQLKSNPHLALRFFF---FTLDNSSLCLHDLYSYSTIVHILSRARLKVQALS 124
S++ L+ +S+ A+ FF F L ++ +Y ++HIL ++ A+
Sbjct: 79 YPEISRVLLRFQSDASRAITFFKWVKFDLGKRP----NVGNYCLLLHILVSSKKFPLAMQ 134
Query: 125 IIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVR 184
+ + V F +L+ +C+ P VFD+L+K L+L ++ + R
Sbjct: 135 FLCELIE----LTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFR 190
Query: 185 MLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLM 244
+ G S + TCN L++ + K + ++ + +V + P+ ++FN L
Sbjct: 191 EVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM-------CRVGIHPNTYTFNILT 243
Query: 245 MGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLR 304
F D +++ +ME G P+L +YN L++ +C G+++EA L++ M + +
Sbjct: 244 NVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVV 303
Query: 305 LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV 364
D+ Y ++I G K G++ +A + F M G++ + +++ LI YCK G + + +
Sbjct: 304 PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKL 363
Query: 365 YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR-------------DVSFCP 411
+ML P+ T +++EG + R+ A+ + R VS C
Sbjct: 364 LHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQ 423
Query: 412 SRK----------------------SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
K +Y LI+ L +EEAL L+ K+ + D K
Sbjct: 424 EGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAK 483
Query: 450 IYDAFIEGYKKLGNDQMAATLIMEM 474
Y A I ++G ++ A +L+ EM
Sbjct: 484 TYRALIGCLCRIGRNREAESLMAEM 508
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 137/325 (42%), Gaps = 51/325 (15%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
++ L+ S ++ + + +++ R + P + T LI KG C G RE
Sbjct: 274 YNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI------KGLCKD-GRVREAH 326
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
++PD S+N L+ + ++G M+ +++ +EM VP+ ++ +++ F
Sbjct: 327 QTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVT---------------------------------- 308
EG++ A E+R L++D+
Sbjct: 387 VREGRLLSAVNFVVELR--RLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHE 444
Query: 309 ----AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV 364
YN +I + IE+A +++ ++ T+ LI C++G A +
Sbjct: 445 AKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESL 504
Query: 365 YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR-NAMRDVSFCPSRKSYELLIKRL 423
+M + +P++ G L+ G C++ +A ++ AM F P +SY L+K +
Sbjct: 505 MAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDP--ESYNSLVKAV 562
Query: 424 CEDG-QMEEALKLQAKMAGKGFEPD 447
CE G ++AL+LQ +M GF P+
Sbjct: 563 CETGCGYKKALELQERMQRLGFVPN 587
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 46/365 (12%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
KF E ++ D P LI+ L K + +I+ +L G P + T N++IS
Sbjct: 123 KFLENMVYHGNVPDIIPCT--TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
GY EI ++ + PDV ++N ++ G+++ EV + M
Sbjct: 181 ----------GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
+ C P++ +Y IL+ C + + A KL +EMR +G DV YN ++ G K G++
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
++A +F +M G + N +T ++ C G A + DML+K F P T +L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 384 IEGLCEKKRVSEALEIIRNAMRDV-------------SFCPSRK---------------- 414
I LC K + A++I+ + FC +K
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 415 -----SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
+Y ++ LC+DG++E+A+++ +++ KG P L Y+ I+G K G A
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 470 LIMEM 474
L+ EM
Sbjct: 471 LLDEM 475
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 158/315 (50%), Gaps = 8/315 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ +++S + K+ ++E++ + R P + T +LI A C+ S G+ + + +
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE--ATCRDSGVGHAM-KLL 262
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+RD PDV ++N L+ G ++G ++ + N+M GC PN+ ++NI++
Sbjct: 263 DEMRDRGCT----PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C G+ +AEKL +M KG V +N +I + G + +A + ++M G + N
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
S+++ L++G+CK +D AI + M+ + P+ T ++ LC+ +V +A+EI+
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL- 437
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
N + P +Y +I L + G+ +A+KL +M K +PD Y + + G +
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 462 GNDQMAATLIMEMSR 476
G A E R
Sbjct: 498 GKVDEAIKFFHEFER 512
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 173/386 (44%), Gaps = 21/386 (5%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLL 150
D+ +Y+TI+ L + QA+ ++ L C D C ++ V LL
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 151 KTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
R P V +++L+ + ++D +I+ + + S G P + T N+++ +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
+ ++ LR G S P V +FN L+ R G + ++ +M + GC
Sbjct: 323 GRWMDAEKLLADM--LRKGFS-----PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
PN SYN L+ FC E KM A + E M +G D+ YNT++ K G++E A E
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
++ G +T+ +I+G K G AI + +M KD +P+ T L+ GL
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ +V EA++ R + P+ ++ ++ LC+ Q + A+ M +G +P+
Sbjct: 496 REGKVDEAIKFFHEFER-MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEM 474
Y IEG G + A L+ E+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 147/290 (50%), Gaps = 10/290 (3%)
Query: 156 CDSAPFVFDLLIKS-CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAG 214
C +++++S C + +D + MLR +G SP + T N+LI+ + +
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLR-KGFSPSVVTFNILINFLCR------- 356
Query: 215 YGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYS 274
G+ + + + +P+ S+N L+ GF ++ +M+ E M GC P++ +
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
YN ++ C +GK+ +A ++ ++ KG + YNT+I G K+G+ KA + EM
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
++ +++T+ L+ G + G VD AI + + + RP A T ++ GLC+ ++
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
A++ + M + P+ SY +LI+ L +G +EAL+L ++ KG
Sbjct: 537 RAIDFLV-FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 116/241 (48%), Gaps = 5/241 (2%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
DV S N L R GE+E + M G VP++ L+ FC GK R+A K+
Sbjct: 102 DVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
E + G DV YN +I G+ K+G+I A M V + VT+ ++ C
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDS 217
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G + A+ V MLQ+D P+ T +LIE C V A++++ + MRD P +
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL-DEMRDRGCTPDVVT 276
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
Y +L+ +C++G+++EA+K M G +P++ ++ + G A L+ +M
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 476 R 476
R
Sbjct: 337 R 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 7/224 (3%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C ++ L+ + KK+D +IE + + SRG P I T N +++ A CK
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT--ALCKD----- 427
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G + + + S P + ++N ++ G + G+ ++ +EM P+ +Y
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
+ L+ EGK+ EA K + E G+R + +N+I+ G KS Q ++A +F M
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
G + N ++ LI G G A+ + ++ K ++S
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 147/301 (48%), Gaps = 9/301 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ +LI S K + + E++ + +G+ P + T N LI+ G C G+ +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN------GYCK-RGMIEDA 412
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ + +L P+ ++N+L+ G+ + + + V N+M +P++ +YN L+
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYNSLIDG 471
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C G A +L M +GL D Y ++I KS ++E+A + F +E GV N
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
V + LI+GYCK G VD A L+ + ML K+ P + T LI GLC ++ EA ++
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLE 590
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
M + P+ + +LI RL +DG + A +M G +PD Y FI+ Y +
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 462 G 462
G
Sbjct: 651 G 651
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 122/232 (52%), Gaps = 1/232 (0%)
Query: 240 FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMR 299
+N L+ R G ++ +++V+ EM PN+Y+YN ++ +C G + EA + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 300 VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVD 359
GL D Y ++I G+ + ++ A + F EM L G N V + HLI+G C +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
A+ ++ M + P T +LI+ LC +R SEAL +++ M + P+ +Y +L
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE-MEETGIKPNIHTYTVL 364
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
I LC + E+A +L +M KG P++ Y+A I GY K G + A ++
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 199/478 (41%), Gaps = 91/478 (19%)
Query: 42 SLLIHHR-----SKSRWTNLRSLLYSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNS 96
S+ + HR SK W SL ++P H S + L +P AL F + N
Sbjct: 59 SMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSL-FSLDLDPKTALNFSHWISQNP 117
Query: 97 SLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKF-FEMLLKTYRQ 155
H +YSY++++ +L NN V F++ L +
Sbjct: 118 RY-KHSVYSYASLLTLL------------------------INNGYVGVVFKIRLLMIKS 152
Query: 156 CDS---APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSC 212
CDS A +V DL C ++ K D E+ L+I C S
Sbjct: 153 CDSVGDALYVLDL----CRKMNK-DERFEL--------------KYKLIIGCYNTLLNSL 193
Query: 213 AGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNL 272
A +G+ E+ + + ++ P+++++N ++ G+ + G +E + +++ G P+
Sbjct: 194 ARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDF 253
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF-- 330
++Y L+ +C + A K++ EM +KG R + AY +I G + +I++A + F
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK 313
Query: 331 ---------------------------------KEMELGGVESNSVTFEHLINGYCKVGD 357
KEME G++ N T+ LI+ C
Sbjct: 314 MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYE 417
+ A + ML+K P T LI G C++ + +A++++ M P+ ++Y
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE-LMESRKLSPNTRTYN 432
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
LIK C+ + +A+ + KM + PD+ Y++ I+G + GN A L+ M+
Sbjct: 433 ELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 26/320 (8%)
Query: 177 DGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPD 236
D + ++ ++ RG+ P T +I + K K E L D + + P+
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR-------VEEACDLFDSLEQKGVNPN 531
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
V + L+ G+ + G+++ + +M C+PN ++N L+ C +GK++EA L E
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
+M GL+ V+ +I K G + A F++M G + ++ T+ I YC+ G
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+ A + M + P+ T LI+G + + + A ++++ MRD PS+ ++
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR-MRDTGCEPSQHTF 710
Query: 417 ELLIKR---------------LCEDGQMEE---ALKLQAKMAGKGFEPDLKIYDAFIEGY 458
LIK LC M E ++L KM P+ K Y+ I G
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 459 KKLGNDQMAATLIMEMSRTQ 478
++GN ++A + M R +
Sbjct: 771 CEVGNLRVAEKVFDHMQRNE 790
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 25/331 (7%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ LI + K+D + ++ + S+ P T N LI G CA G +E
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI------HGLCAD-GKLKEA 586
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
L + K+ L+P V + L+ +DG+ + + +M G P+ ++Y +
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
+C EG++ +AE + +MR G+ D+ Y+++I G+ GQ A + K M G E +
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 342 SVTFEHLINGY---------------CKVGDV---DSAILVYKDMLQKDFRPEASTIGML 383
TF LI C + ++ D+ + + + M++ P A + L
Sbjct: 707 QHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
I G+CE + A ++ + R+ PS + L+ C+ + EA K+ M G
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
P L+ I G K G + ++ +
Sbjct: 827 HLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 14/254 (5%)
Query: 147 EMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
E ++ R+ +P F + LIK +L + + + ++++ +R G P T LI
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 205 V-----AKCKGS----CAGYGI--FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
+ K KGS CA + F + L + + + P+ S+ L++G G +
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 254 EMIEEVWNEMERF-GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+ E+V++ M+R G P+ +N L++ C K EA K+ ++M G + +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I G YK G+ E+ F+ + G + + ++ +I+G K G V++ ++ M +
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Query: 373 FRPEASTIGMLIEG 386
+ + T +LIEG
Sbjct: 897 CKFSSQTYSLLIEG 910
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 41/348 (11%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
+ ++I + +D + + + +GI+ I T N+LI G + R++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K ++ P+V +F+ L+ F ++G++ EE+ EM G P+ +Y L+ F
Sbjct: 326 -------KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C E + +A ++ + M KG ++ +N +I G+ K+ +I+ E F++M L GV +++
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE---- 398
VT+ LI G+C++G ++ A ++++M+ + P T +L++GLC+ +ALE
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 399 --------------IIRNAMRDVS--------FC--------PSRKSYELLIKRLCEDGQ 428
II + M + S FC P K+Y ++I LC+ G
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+ EA L KM G PD Y+ I + G+ + LI E+ R
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 182/404 (45%), Gaps = 35/404 (8%)
Query: 106 YSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDL 165
Y ++ + + LK A ++ +++ C C + F M + F
Sbjct: 104 YDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFST 163
Query: 166 LIKS-CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS--CVAK--------------- 207
LI CLE ++ ++E+V + G P + T N L++ C++
Sbjct: 164 LINGLCLE-GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222
Query: 208 -CKGSCAGYGIFREIFGLRDGDSKV-----------RLRPDVHSFNDLMMGFYRDGEMEM 255
C+ + YG + + G + + ++ D ++ ++ G + G ++
Sbjct: 223 GCQPNAVTYGPVLNVM-CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIG 315
++NEME G N+ +YNIL+ FC G+ + KL +M + + +V ++ +I
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 316 GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP 375
F K G++ +AEE KEM G+ +++T+ LI+G+CK +D A + M+ K P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 376 EASTIGMLIEGLCEKKRVSEALEIIRN-AMRDVSFCPSRKSYELLIKRLCEDGQMEEALK 434
T +LI G C+ R+ + LE+ R ++R V +Y LI+ CE G++ A +
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGV--VADTVTYNTLIQGFCELGKLNVAKE 459
Query: 435 LQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
L +M + P++ Y ++G G + A + ++ +++
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 164/366 (44%), Gaps = 48/366 (13%)
Query: 117 RLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKI 176
+L SII L D NA F EM +K + +++LI +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLD--NAFNLFNEMEMKGIT---TNIITYNILIGGFCNAGRW 314
Query: 177 DGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPD 236
D +++R + R I+P + T ++LI K G RE L + PD
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVK-------EGKLREAEELHKEMIHRGIAPD 367
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
++ L+ GF ++ ++ ++ + M GC PN+ ++NIL+ +C ++ + +L+
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
+M ++G+ D YNT+I GF + G++ A+E F+EM V N VT++ L++G C G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 357 DVDSAILVYKDMLQ-----------------------------------KDFRPEASTIG 381
+ + A+ +++ + + K +P T
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 382 MLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAG 441
++I GLC+K +SEA E++ M + P +Y +LI+ DG +++KL ++
Sbjct: 548 IMIGGLCKKGPLSEA-ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Query: 442 KGFEPD 447
GF D
Sbjct: 607 CGFSVD 612
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 7/242 (2%)
Query: 150 LKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
L + CD F++LI + +ID +E+ R + RG+ T N LI +
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 210 GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
+F+E+ + + P++ ++ L+ G +GE E E++ ++E+
Sbjct: 453 KLNVAKELFQEMVSRK-------VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
++ YNI++ C K+ +A L+ + +KG++ V YN +IGG K G + +AE
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
F++ME G + T+ LI + GD ++ + +++ + F +ASTI M+I+ L +
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Query: 390 KK 391
+
Sbjct: 626 GR 627
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 205/427 (48%), Gaps = 56/427 (13%)
Query: 66 LTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSI 125
L +H +I +L S +FF L + H +S + H+L+ R + + L +
Sbjct: 47 LRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQR-RFKELQV 105
Query: 126 IKSALVSRCLFDCNNAPVKFFEMLLK---TYRQCDSAPFVFDLLIKSCLELKKIDGSIEI 182
I E LL+ T+R+ +S V+D+L+ L+ +D S+ I
Sbjct: 106 I-------------------LEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYI 146
Query: 183 VRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI--------FGLRDG------- 227
++ ++ + ++ ++ N S + + + + +++EI + DG
Sbjct: 147 LKKMKDQNLNVSTQSYN---SVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKL 203
Query: 228 -DSKVRLR--------PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
D+ + LR P V SFN +M G+ + G ++M + + + + G VP++YS+NIL
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ C G + EA +L +M G+ D YN + GF+ G I A E ++M G+
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTI---GMLIEGLCEKKRVSE 395
+ +T+ L+ G C++G++D +++ KDML + F E ++I +++ GLC+ R+ E
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF--ELNSIIPCSVMLSGLCKTGRIDE 381
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
AL + N M+ P +Y ++I LC+ G+ + AL L +M K P+ + + A +
Sbjct: 382 ALSLF-NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 456 EGYKKLG 462
G + G
Sbjct: 441 LGLCQKG 447
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 21/334 (6%)
Query: 138 CNNAPVKFFEMLLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
C ++ + L+T D P V F+ ++ +L +D + + G+ P +
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 196 RTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM 255
+ N+LI+ G C G E L +K + PD ++N L GF+ G +
Sbjct: 258 YSHNILIN------GLCL-VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLD-VTAYNTII 314
EV +M G P++ +Y IL+ C G + L ++M +G L+ + + ++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
G K+G+I++A F +M+ G+ + V + +I+G CK+G D A+ +Y +M K
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 375 PEASTIGMLIEGLCEKKRVSEALEIIRNAMR-----DVSFCPSRKSYELLIKRLCEDGQM 429
P + T G L+ GLC+K + EA ++ + + D+ Y ++I + G +
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL------YNIVIDGYAKSGCI 484
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
EEAL+L + G P + +++ I GY K N
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 44/337 (13%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRT------------------------ 197
+++L K L I G+ E++R + +G+SP + T
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353
Query: 198 ------CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
N +I C G C G E L + L PD+ +++ ++ G + G
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKT-GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
+ +M +++EM +PN ++ L+ C +G + EA L + + G LD+ YN
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
+I G+ KSG IE+A E FK + G+ + TF LI GYCK ++ A + +
Sbjct: 473 IVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLY 532
Query: 372 DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEE 431
P + L++ +++++ +R M+ P+ +Y ++ K LC + E
Sbjct: 533 GLAPSVVSYTTLMDAYANCGN-TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Query: 432 ALKLQAK------------MAGKGFEPDLKIYDAFIE 456
+ + M +G PD Y+ I+
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
+ P V +FN L+ G+ + + ++ + ++ +G P++ SY LM + G + +
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ------------IEKAEEFFKEMELGGVES 340
+L EM+ +G+ Y+ I G + + EK ++ ++ME G+
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ +T+ +I C+V + A + + M ++ ++T +LI+ LC + +A I
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
++++ + S+ +Y LIK C G E A+KL ++ +GF ++ Y A I
Sbjct: 679 Y-SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 125/322 (38%), Gaps = 40/322 (12%)
Query: 138 CNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRT 197
C ++ F+++++T A F+ LI + + I + +I+ +++ G++P + +
Sbjct: 483 CIEEALELFKVVIETGITPSVA--TFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 198 CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIE 257
L+ A C G + I LR + P +++ + G R + E
Sbjct: 541 YTTLMDAYANC-------GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 258 EVWNE------------MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
V E ME G P+ +YN ++ C + A E M+ + L
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
YN +I G I KA+ F ++ V + + LI +C GD + A+ ++
Sbjct: 654 SSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLF 713
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRV------SEALEIIRNAMRDVSFCP-------- 411
+L + F +I LC + + S + + + R +CP
Sbjct: 714 HQLLHRGFNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLISNERSFVYCPILSANCRR 773
Query: 412 -----SRKSYELLIKRLCEDGQ 428
+ S+E+L+K + GQ
Sbjct: 774 HTLSVEKLSHEVLLKMKSQLGQ 795
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 197/420 (46%), Gaps = 47/420 (11%)
Query: 78 LKSNPHL--ALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCL 135
LK P+ +R F F L+ YSY+ ++H+L ++R +A+ + + R +
Sbjct: 169 LKQAPYALRKMREFGFVLN--------AYSYNGLIHLLLKSRFCTEAMEVYR-----RMI 215
Query: 136 FDCNNAPVKFFEML---LKTYRQCDSA---------------PFVFDLLIKSCLELKKID 177
+ ++ + L L R DS + F + I+ KI+
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 178 GSIEIVRMLRSRGISPQIRTCNLLIS--CVAKCKGSCAGYGIFREIF-GLRDGDSKVRLR 234
+ EI++ + G P + T +LI C A+ K CA +E+F ++ G R +
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTAR-KLDCA-----KEVFEKMKTG----RHK 325
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD ++ L+ F + +++ +++ W+EME+ G VP++ ++ IL+ C G EA
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ MR +G+ ++ YNT+I G + +++ A E F ME GV+ + T+ I+ Y K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
GD SA+ ++ M K P + L + R EA +I ++D+ P
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY-GLKDIGLVPDSV 504
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+Y +++K + G+++EA+KL ++M G EPD+ + ++ I K A + M M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 178/386 (46%), Gaps = 27/386 (6%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
++Y+++ + +L RA +A I+K C D V L T R+ D A
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA--LCTARKLDCAKE 314
Query: 162 VFD---------------LLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
VF+ L+ + + +D + + G P + T +L+ A
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD--A 372
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
CK G F E F D + P++H++N L+ G R ++ E++ ME
Sbjct: 373 LCKA-----GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G P Y+Y + + + G A + +E+M+ KG+ ++ A N + K+G+ +A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
++ F ++ G+ +SVT+ ++ Y KVG++D AI + +M++ P+ + LI
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
L + RV EA ++ M+++ P+ +Y L+ L ++G+++EA++L M KG P
Sbjct: 548 LYKADRVDEAWKMFMR-MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 447 DLKIYDAFIEGYKKLGNDQMAATLIM 472
+ ++ + K ND++ L M
Sbjct: 607 NTITFNTLFDCLCK--NDEVTLALKM 630
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 8/314 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++LLI LE I+ + ++ ++S G P + T N L+ K G E+
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS-------GKIDEL 839
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEME-MIEEVWNEMERFGCVPNLYSYNILMA 280
F L S + + N ++ G + G ++ ++ ++ M P +Y L+
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
G++ EA++L+E M G R + YN +I GF K+G+ + A FK M GV
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ T+ L++ C VG VD + +K++ + P+ ++I GL + R+ EAL +
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
P +Y LI L G +EEA K+ ++ G EP++ ++A I GY
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 461 LGNDQMAATLIMEM 474
G + A + M
Sbjct: 1080 SGKPEHAYAVYQTM 1093
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 196/461 (42%), Gaps = 94/461 (20%)
Query: 84 LALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQAL-------------------- 123
LAL+ F +D C+ D+++Y+TI+ L + +A+
Sbjct: 626 LALKMLFKMMDMG--CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTL 683
Query: 124 --SIIKSALV-------SRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELK 174
++K++L+ + L++C + P F ++ LI S L
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYNCADQPANLF----------------WEDLIGSILAEA 727
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVA-KCK-GSCAGYGIFREIFGLRDGDSKVR 232
ID ++ L + GI + +L+ + CK + +G E F +
Sbjct: 728 GIDNAVSFSERLVANGICRDGDS--ILVPIIRYSCKHNNVSGARTLFEKF-----TKDLG 780
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
++P + ++N L+ G +E+ ++V+ +++ GC+P++ +YN L+ + GK+ E
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE---------------------------- 324
+L++EM + +N +I G K+G ++
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 325 --------KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
+A++ F+ M G N + LING+ K G+ D+A ++K M+++ RP+
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
T +L++ LC RV E L + +++ P Y L+I L + ++EEAL L
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKE-LKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 437 AKM-AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+M +G PDL Y++ I G + A + E+ R
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 8/272 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ LI L + ++D ++E+ + S G+ P T + I K S + F ++
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ P++ + N + + G ++++ ++ G VP+ +YN++M
Sbjct: 460 -------KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
+ G++ EA KL EM G DV N++I YK+ ++++A + F M+ ++
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
VT+ L+ G K G + AI +++ M+QK P T L + LC+ V+ AL+++
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
M D+ P +Y +I L ++GQ++EA+
Sbjct: 633 KMM-DMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 152/350 (43%), Gaps = 43/350 (12%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+++++K ++ +ID +I+++ + G P + N LI+ + K + +F +
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+++L+P V ++N L+ G ++G+++ E++ M + GC PN ++N L
Sbjct: 565 -------KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME------- 334
C ++ A K+ +M G DV YNTII G K+GQ+++A FF +M+
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDF 677
Query: 335 ------LGGVESNSVT----------------------FEHLINGYCKVGDVDSAILVYK 366
L GV S+ +E LI +D+A+ +
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 367 DMLQKDF-RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
++ R S + +I C+ VS A + +D+ P +Y LLI L E
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
+E A + ++ G PD+ Y+ ++ Y K G L EMS
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMS 847
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 50/315 (15%)
Query: 107 STIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQ-----CDSAPF 161
+ ++ I L+V++ I L D K E L + Y++ C++
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE-LFELYKEMSTHECEANTI 856
Query: 162 VFDLLIKSCLELKKIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+++I ++ +D ++++ ++ R SP T LI ++K G E
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS-------GRLYE 909
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
L +G RP+ +N L+ GF + GE + ++ M + G P+L +Y++L+
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS-------------------- 320
C G++ E ++E++ GL DV YN II G KS
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 321 ----------------GQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV 364
G +E+A + + E++ G+E N TF LI GY G + A V
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 365 YKDMLQKDFRPEAST 379
Y+ M+ F P T
Sbjct: 1090 YQTMVTGGFSPNTGT 1104
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 1/231 (0%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
++ D +++ + G ++ +M FG V N YSYN L+ L EA
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+++ M ++G R + Y++++ G K I+ KEME G++ N TF I
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+ G ++ A + K M + P+ T +LI+ LC +++ A E+ M+ P
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK-MKTGRHKPD 327
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
R +Y L+ R ++ ++ + ++M G PD+ + ++ K GN
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 8/190 (4%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++++LI + + D + + + + G+ P ++T ++L+ C+ G F+E+
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF-GCVPNLYSYNILMA 280
+ L PDV +N ++ G + +E ++NEM+ G P+LY+YN L+
Sbjct: 988 -------KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
G + EA K++ E++ GL +V +N +I G+ SG+ E A ++ M GG
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 341 NSVTFEHLIN 350
N+ T+E L N
Sbjct: 1101 NTGTYEQLPN 1110
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 285 EGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
+GK+ E +++ M+ + ++ D Y TI G +++A ++M G N+ +
Sbjct: 131 DGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+ LI+ K A+ VY+ M+ + FRP T L+ GL +++ + + +++ M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE-M 249
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ P+ ++ + I+ L G++ EA ++ +M +G PD+ Y I+
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 224/504 (44%), Gaps = 61/504 (12%)
Query: 17 IKAYHLYSSASTP-PSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTPIHFSQIA 75
++ +H+ S P P D I+ + + L + R RW L +S+ P+ S++
Sbjct: 14 VRCFHVAKKFSNPEPED---ILFSALCLNLRQR---RWNTLHQ--FSSSLTNPL-ISRVL 64
Query: 76 LQLKSNPHLALRFFFFTLDNSSLCLHD--LYSYSTIVHILSRARLKVQALSIIKSALVSR 133
+ +S+P LAL F+ + L ++++ + + ++H+L +R ALSI+ + +
Sbjct: 65 REFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLM--- 121
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
+ +P+ L+++Y+ C S+P VFD L+++C + G+ E++ R+ G
Sbjct: 122 SVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCV 181
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
+ N + C+ + +++E+ + +V++FN ++ F ++ ++
Sbjct: 182 SVHALNNFMGCLLNVNEIDRFWKVYKEM-------DSLGYVENVNTFNLVIYSFCKESKL 234
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG---LRLDVTAY 310
V+ M + G PN+ S+N+++ C G MR A +L +M + + + Y
Sbjct: 235 FEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTY 294
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG-------------- 356
N++I GF K+G+++ AE +M GV+ N T+ L++ Y + G
Sbjct: 295 NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTS 354
Query: 357 ---------------------DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
D++ A+ V +DM K+ + + T +++ GLC V E
Sbjct: 355 KGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKE 414
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
A+E R + + + L+ D ++ A ++ M +G D + I
Sbjct: 415 AVEFQRQ-ISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLI 473
Query: 456 EGYKKLGNDQMAATLIMEMSRTQK 479
+GY K G + A + M + K
Sbjct: 474 DGYLKEGKLERALEIYDGMIKMNK 497
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 6/238 (2%)
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
LRD +SK ++ D + ++ G R+G ++ E ++ V ++ +N LM F
Sbjct: 384 LRDMNSK-NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
+ K+ A+++ M V+GL LD ++ T+I G+ K G++E+A E + M SN V
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
+ ++NG K G +A V M KD T L+ + V EA +I+
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKM 558
Query: 404 MR-DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ D S ++ ++I LC+ G E+A ++ M +G PD Y I + K
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L D SF L+ G+ ++G++E E+++ M + NL YN ++ G AE
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME-LGGVESNS-VTFEHLIN 350
+ M +K D+ YNT++ K+G +E+A++ +M+ G +S S VTF +IN
Sbjct: 522 AVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
CK G + A V K M+++ P++ T G LI + + + +E+
Sbjct: 578 HLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVEL 626
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 166/368 (45%), Gaps = 48/368 (13%)
Query: 144 KFFEMLLKTYR--QCDSAPFV--FDLLIKSCLELKKIDGSIEIVR---MLRSRGISPQIR 196
K FE L YR +C P V F+++I + + +++++ M+ +SP
Sbjct: 233 KLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAV 292
Query: 197 TCNLLIS--CVA-------KCKGSCA---------GYGIFREIFGLRDG--DSKVRLRPD 236
T N +I+ C A + +G YG + +G R G D +RL +
Sbjct: 293 TYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG-RAGSSDEALRLCDE 351
Query: 237 VHS---------FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGK 287
+ S +N ++ + +G++E V +M + ++ I++ C G
Sbjct: 352 MTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 288 MREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
++EA + ++ K L D+ +NT++ F + ++ A++ M + G+ ++++F
Sbjct: 412 VKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGT 471
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM--R 405
LI+GY K G ++ A+ +Y M++ + ++ GL K+ ++ A E + NAM +
Sbjct: 472 LIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL-SKRGMAGAAEAVVNAMEIK 530
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI--YDAFIEGYKKLGN 463
D+ +Y L+ + G +EEA + +KM + E + + ++ I K G+
Sbjct: 531 DIV------TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGS 584
Query: 464 DQMAATLI 471
+ A ++
Sbjct: 585 YEKAKEVL 592
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 169/357 (47%), Gaps = 31/357 (8%)
Query: 148 MLLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
++ K ++C P V + LI ++ KI ++E+ R+++ G+ ++T +++I+
Sbjct: 470 VVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Query: 206 AKCKGSCAGYGIFREIF-------------------GLRDGD---------SKVRLRPDV 237
K K + +F ++ G+ + D K+R RP
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTT 589
Query: 238 HSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
+F ++ G+ + G+M EV++ M R GCVP ++++N L+ + +M +A ++ +E
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
M + G+ + Y I+ G+ G KA E+F ++ G++ + T+E L+ CK G
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYE 417
+ SA+ V K+M ++ + +LI+G + V EA ++I+ M+ P +Y
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ-MKKEGVKPDIHTYT 768
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
I + G M A + +M G +P++K Y I+G+ + + A + EM
Sbjct: 769 SFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 825
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 144/333 (43%), Gaps = 49/333 (14%)
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFN 241
+VR + GI I + ++ G +F+ + + P V ++
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL-------KECGFTPTVVTYG 488
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
L+ + + G++ EV M+ G NL +Y++++ F A ++E+M +
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G++ DV YN II F G +++A + KEM+ + TF +I+GY K GD+ +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI---------------------- 399
+ V+ M + P T LI GL EK+++ +A+EI
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 400 ----------------IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
++N DV +YE L+K C+ G+M+ AL + +M+ +
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIF----TYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+ +Y+ I+G+ + G+ AA LI +M +
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 37/270 (13%)
Query: 243 LMMGFY-RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
LM+ FY R G+M E + M G P Y L+ + M EA +M+ +
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE 373
Query: 302 GLRLDVTAYNTIIGGFYKSGQ-----------------------------------IEKA 326
G+ + + Y+ I+GGF K+G +E+A
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
E +EME G+++ + +++GY V D ++V+K + + F P T G LI
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
+ ++S+ALE+ R M++ + K+Y ++I + A + M +G +P
Sbjct: 494 YTKVGKISKALEVSR-VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 447 DLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
D+ +Y+ I + +GN A + EM +
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQK 582
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 119/256 (46%), Gaps = 13/256 (5%)
Query: 143 VKFFEMLLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNL 200
++ F+M+ R+C P V F+ LI +E ++++ ++EI+ + G+S T
Sbjct: 609 LEVFDMM----RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 201 LISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVW 260
++ A + + F + L D+ ++ L+ + G M+ V
Sbjct: 665 IMQGYASVGDTGKAFEYFTRL-------QNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 261 NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS 320
EM N + YNIL+ + G + EA L ++M+ +G++ D+ Y + I K+
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 321 GQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTI 380
G + +A + +EME GV+ N T+ LI G+ + + A+ Y++M +P+ +
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 381 GMLIEGLCEKKRVSEA 396
L+ L + ++EA
Sbjct: 838 HCLLTSLLSRASIAEA 853
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 135/327 (41%), Gaps = 14/327 (4%)
Query: 137 DCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIR 196
D A + FE + K R F L++K + + E +R+RGI+P R
Sbjct: 292 DNWQAVISAFEKISKPSRT------EFGLMVKFYGRRGDMHRARETFERMRARGITPTSR 345
Query: 197 TCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMI 256
LI A + R++ + + + +++ ++ GF + G E
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKM-------KEEGIEMSLVTYSVIVGGFSKAGHAEAA 398
Query: 257 EEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG 316
+ ++E +R N Y ++ C M AE L EM +G+ + Y+T++ G
Sbjct: 399 DYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDG 458
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
+ +K FK ++ G VT+ LIN Y KVG + A+ V + M ++ +
Sbjct: 459 YTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 518
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
T M+I G + K + A + + +++ P Y +I C G M+ A++
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKE-GMKPDVILYNNIISAFCGMGNMDRAIQTV 577
Query: 437 AKMAGKGFEPDLKIYDAFIEGYKKLGN 463
+M P + + I GY K G+
Sbjct: 578 KEMQKLRHRPTTRTFMPIIHGYAKSGD 604
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 157/333 (47%), Gaps = 10/333 (3%)
Query: 147 EMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
E +LK + P F F +L +K + ++ + G+ TC++L++
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
+ K +G EI G L P+ +N ++ G+ R G++ ME
Sbjct: 364 LCK-EGKIEKA---EEILGREMAKG---LVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
+ G P+ +YN L+ FC G+M AEK +M++KG+ V YN +IGG+ + + +
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
K + KEME G N V++ LIN CK + A +V +DM + P+ MLI
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+G C K ++ +A + ++ + +Y LI L G++ EA L +++ KG
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
+PD+ Y++ I GY GN Q L EM R+
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 18/318 (5%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGI--- 217
++ LI+ EL +++ + + V ++ +G+SP + T N+LI GYG
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI----------GGYGRKYE 474
Query: 218 FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNI 277
F + F + P+V S+ L+ + ++ + V +ME G P + YN+
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
L+ C +GK+ +A + +EM KG+ L++ YNT+I G +G++ +AE+ E+ G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
++ + T+ LI+GY G+V I +Y++M + +P T +LI LC K E +
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTK----EGI 649
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
E+ ++S P Y ++ G ME+A LQ +M K D Y++ I G
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 458 YKKLGNDQMAATLIMEMS 475
K+G +LI EM+
Sbjct: 710 QLKVGKLCEVRSLIDEMN 727
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 195/471 (41%), Gaps = 67/471 (14%)
Query: 25 SASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTPIHFSQIALQLKSNPHL 84
SAST P +S + + K R NLR LL + T L+ S P
Sbjct: 33 SASTDPEPESQPEQAPPTNPVTGDEKLR--NLRVLLQQNRIETARGVLSSLLRSDSTPFA 90
Query: 85 ALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVK 144
+ + F SS L +SY + +L+ +++ +A + F N +
Sbjct: 91 SPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADL---------FFALRNEGI- 140
Query: 145 FFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
Y DS + D L+K+ K+ +I + + P I
Sbjct: 141 --------YPSSDSLTLLLDHLVKT----KQFRVTINVFLNILESDFRPSKFMYGKAIQ- 187
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
A K S G G+ E+F D R+ P V +N L+ G + M E++++EM
Sbjct: 188 -AAVKLSDVGKGL--ELFNRMKHD---RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
+P+L +YN L+ +C G ++ K+ E M+ + + +NT++ G +K+G +E
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
AE KEM+ G ++ TF L +GY ++A+ VY+ + + A T +L+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 385 EGLCEKKRVSEALEI--------------IRNAMRDVSFC-------------------- 410
LC++ ++ +A EI I N M D +C
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID-GYCRKGDLVGARMKIEAMEKQGM 420
Query: 411 -PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
P +Y LI+R CE G+ME A K KM KG P ++ Y+ I GY +
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 12/294 (4%)
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFN 241
+ R + RG+SP++R N+LI C G + F K + ++ ++N
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLID-------GCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
L+ G G++ E++ E+ R G P++++YN L++ + G ++ L+EEM+
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G++ + Y+ +I K G IE E F EM L + + + + +++ Y GD++ A
Sbjct: 629 GIKPTLKTYHLLISLCTKEG-IELTERLFGEMSL---KPDLLVYNGVLHCYAVHGDMEKA 684
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
+ K M++K + +T LI G + ++ E +I + M P +Y +++K
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI-DEMNAREMEPEADTYNIIVK 743
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
CE A +M KGF D+ I + + G K+ + A +I EM+
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++++LI C KI+ + + + +GI + T N LI ++ + EI
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
S+ L+PDV ++N L+ G+ G ++ ++ EM+R G P L +Y++L++L
Sbjct: 591 -------SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643
Query: 282 FCGEG-------------------------------KMREAEKLWEEMRVKGLRLDVTAY 310
EG M +A L ++M K + LD T Y
Sbjct: 644 CTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTY 703
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
N++I G K G++ + EM +E + T+ ++ G+C+V D SA + Y++M +
Sbjct: 704 NSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQE 763
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
K F + L+ GL E+ R EA EI+ + M
Sbjct: 764 KGFLLDVCIGNELVSGLKEEWRSKEA-EIVISEM 796
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 7/273 (2%)
Query: 191 ISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRD 250
I P + T +LI+ + K + +F ++ G R D V ++ D FN L+ G +
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV-IKADSIHFNTLIDGLCKV 383
Query: 251 GEMEMIEEVWNEM---ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDV 307
G ++ EE+ M ER CVPN +YN L+ +C GK+ A+++ M+ ++ +V
Sbjct: 384 GRLKEAEELLVRMKLEER--CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 308 TAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKD 367
NTI+GG + + A FF +ME GV+ N VT+ LI+ C V +V+ A+ Y+
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDG 427
ML+ P+A LI GLC+ +R +A+ ++ +++ F +Y +LI C+
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK-LKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 428 QMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
E+ ++ M +G +PD Y+ I + K
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 204/488 (41%), Gaps = 33/488 (6%)
Query: 5 IVKHFFLSPPKPIKAYHLYSSASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTK 64
+ K L+ K I +SS P + + + SL + R+ + W L L+ +
Sbjct: 232 VWKERLLTEEKIIALISRFSSHGVSP-NSVWLTRFISSLCKNARANTAWDILSDLMKNKT 290
Query: 65 TLTPIHFSQIALQLKSNPHLA-LRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQAL 123
L F+ + L N ++ + +D + D+ + +++ L ++R +AL
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTLCKSRRVDEAL 349
Query: 124 SIIKSALVSRC---------------LFD--CNNAPVKFFEMLL---KTYRQCDSAPFVF 163
+ + R L D C +K E LL K +C +
Sbjct: 350 EVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTY 409
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
+ LI K++ + E+V ++ I P + T N ++ G C +G+ +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG------GMCRHHGLNMAVVF 463
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
D + K ++ +V ++ L+ +E + +M GC P+ Y L++ C
Sbjct: 464 FMDME-KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
+ +A ++ E+++ G LD+ AYN +IG F EK E +ME G + +S+
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
T+ LI+ + K D +S + + M + P +T G +I+ C + EAL++ ++
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
P+ Y +LI + G +AL L+ +M K P+++ Y+A +K L
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL---FKCLNE 699
Query: 464 DQMAATLI 471
TL+
Sbjct: 700 KTQGETLL 707
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 20/242 (8%)
Query: 255 MIEEVWNE-----------MERF---GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV 300
++ EVW E + RF G PN ++ C + A + ++
Sbjct: 228 VLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMK 287
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDS 360
L+ +N ++ ++ I + + +M+ + + VT LIN CK VD
Sbjct: 288 NKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE 347
Query: 361 AILVYKDMLQKD------FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
A+ V++ M K + ++ LI+GLC+ R+ EA E++ + P+
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+Y LI C G++E A ++ ++M +P++ + + G + MA M+M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 475 SR 476
+
Sbjct: 468 EK 469
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 154/314 (49%), Gaps = 7/314 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ + +LI C ++E+V + S I +I+ + K + RE
Sbjct: 514 YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA----RE 569
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ L + + RL S+N ++ GF+++GEM+ + EM G PN+ +Y LM
Sbjct: 570 L--LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C +M +A ++ +EM+ KG++LD+ AY +I GF K +E A F E+ G+
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ + LI+G+ +G++ +A+ +YK ML+ R + T LI+GL + + A E+
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
M+ V P Y +++ L + GQ + +K+ +M P++ IY+A I G+ +
Sbjct: 748 -TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 461 LGNDQMAATLIMEM 474
GN A L EM
Sbjct: 807 EGNLDEAFRLHDEM 820
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 9/315 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
FV + ++ + K D + E++ + SRGI P + + N ++ + K +F
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
I L G L+P+ ++++ L+ G +R+ + + EV N M N Y ++
Sbjct: 504 I--LEKG-----LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 281 LFCGEGKMREAEKLWEEM-RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE 339
C G+ +A +L M K L + +YN+II GF+K G+++ A ++EM G+
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
N +T+ L+NG CK +D A+ + +M K + + G LI+G C++ + A +
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
+ + PS+ Y LI G M AL L KM G DL Y I+G
Sbjct: 677 FSELLEE-GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 460 KLGNDQMAATLIMEM 474
K GN +A+ L EM
Sbjct: 736 KDGNLILASELYTEM 750
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 181/402 (45%), Gaps = 52/402 (12%)
Query: 110 VHILSRA-RLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQ---CDSAPFVFDL 165
+ +LSRA + S++ S V C C + LL+ ++ C + +
Sbjct: 253 LEVLSRAIERGAEPDSLLYSLAVQAC---CKTLDLAMANSLLREMKEKKLCVPSQETYTS 309
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
+I + ++ +D +I + + S GIS + LI+ G C + + L
Sbjct: 310 VILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLIT------GHCKNNDLVSALV-LF 362
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
D K P+ +F+ L+ F ++GEME E + +ME G P+++ + ++ +
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
K EA KL++E GL +V NTI+ K G+ ++A E +ME G+ N V++
Sbjct: 423 QKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG------------------- 386
+++ G+C+ ++D A +V+ ++L+K +P T +LI+G
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Query: 387 ----------------LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME 430
LC+ + S+A E++ N + + C S SY +I ++G+M+
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 431 EALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
A+ +M G G P++ Y + + G K N++M L M
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCK--NNRMDQALEM 641
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 7/213 (3%)
Query: 174 KKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL 233
++D ++E+ ++++G+ I LI K + +F E+ L +G L
Sbjct: 633 NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL--LEEG-----L 685
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
P +N L+ GF G M +++ +M + G +L +Y L+ +G + A +
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L+ EM+ GL D Y I+ G K GQ K + F+EM+ V N + + +I G+
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
+ G++D A ++ +ML K P+ +T +L+ G
Sbjct: 806 REGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 139/322 (43%), Gaps = 8/322 (2%)
Query: 157 DSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG 216
D LL+++ L +K ++E++ RG P +L + K
Sbjct: 230 DGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANS 289
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
+ RE+ K P ++ +++ + G M+ + +EM G N+ +
Sbjct: 290 LLREM------KEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343
Query: 277 ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
L+ C + A L+++M +G + ++ +I F K+G++EKA EF+K+ME+
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
G+ + +I G+ K + A+ ++ + + ++ LC++ + EA
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEA 462
Query: 397 LEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
E++ + M P+ SY ++ C M+ A + + + KG +P+ Y I+
Sbjct: 463 TELL-SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Query: 457 GYKKLGNDQMAATLIMEMSRTQ 478
G + ++Q A ++ M+ +
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSN 543
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 255 MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY---- 310
++ ++ + + FG N ++N L+ + + + A + +M L LDV +
Sbjct: 146 LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM----LELDVIPFFPYV 201
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
N + + + +A+E + M GV+ ++VT + L+ + A+ V ++
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC-PSRKSYELLIKRLCEDGQM 429
+ P++ + ++ C+ ++ A ++R M++ C PS+++Y +I + G M
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLR-EMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
++A++L+ +M G ++ + I G+ K N+ + + L++
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCK--NNDLVSALVL 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 155/397 (39%), Gaps = 63/397 (15%)
Query: 74 IALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHIL-SRARLKVQALSIIKSALVS 132
+ L ++NP ALRF+ + D + ++HIL S +A S L+
Sbjct: 78 VLLNRRNNPEAALRFYNWARPWRG-SFEDGDVFWVLIHILVSSPETYGRA-----SDLLI 131
Query: 133 RCLFDCNNAPVKFFEMLLKTYRQCDSAPF-----VFDLLIKSCLELKKIDGSIEIVRMLR 187
R + N P+ ++ K S F F+ L+ + + ++ D +++IV +
Sbjct: 132 RYVSTSNPTPMASV-LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQML 190
Query: 188 SRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR-DGDSKVRLRPDVHSFNDLMM- 245
+ P N +S + + ++ + + DGD+ L+M
Sbjct: 191 ELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT---------TQLLMR 241
Query: 246 -GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLR 304
+ E +E + +ER G P+ Y++ + C + A L EM+ K L
Sbjct: 242 ASLREEKPAEALEVLSRAIER-GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLC 300
Query: 305 L-DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAIL 363
+ Y ++I K G ++ A EM G+ N V LI G+CK D+ SA++
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 364 VYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRL 423
++ M EK+ S P+ ++ +LI+
Sbjct: 361 LFDKM--------------------EKEGPS----------------PNSVTFSVLIEWF 384
Query: 424 CEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
++G+ME+AL+ KM G P + I+G+ K
Sbjct: 385 RKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 7/273 (2%)
Query: 191 ISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRD 250
I P + T +LI+ + K + +F ++ G R D V ++ D FN L+ G +
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV-IKADSIHFNTLIDGLCKV 383
Query: 251 GEMEMIEEVWNEM---ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDV 307
G ++ EE+ M ER CVPN +YN L+ +C GK+ A+++ M+ ++ +V
Sbjct: 384 GRLKEAEELLVRMKLEER--CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 308 TAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKD 367
NTI+GG + + A FF +ME GV+ N VT+ LI+ C V +V+ A+ Y+
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDG 427
ML+ P+A LI GLC+ +R +A+ ++ +++ F +Y +LI C+
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK-LKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 428 QMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
E+ ++ M +G +PD Y+ I + K
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 204/488 (41%), Gaps = 33/488 (6%)
Query: 5 IVKHFFLSPPKPIKAYHLYSSASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTK 64
+ K L+ K I +SS P + + + SL + R+ + W L L+ +
Sbjct: 232 VWKERLLTEEKIIALISRFSSHGVSP-NSVWLTRFISSLCKNARANTAWDILSDLMKNKT 290
Query: 65 TLTPIHFSQIALQLKSNPHLA-LRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQAL 123
L F+ + L N ++ + +D + D+ + +++ L ++R +AL
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTLCKSRRVDEAL 349
Query: 124 SIIKSALVSRC---------------LFD--CNNAPVKFFEMLL---KTYRQCDSAPFVF 163
+ + R L D C +K E LL K +C +
Sbjct: 350 EVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTY 409
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
+ LI K++ + E+V ++ I P + T N ++ G C +G+ +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG------GMCRHHGLNMAVVF 463
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
D + K ++ +V ++ L+ +E + +M GC P+ Y L++ C
Sbjct: 464 FMDME-KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
+ +A ++ E+++ G LD+ AYN +IG F EK E +ME G + +S+
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
T+ LI+ + K D +S + + M + P +T G +I+ C + EAL++ ++
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
P+ Y +LI + G +AL L+ +M K P+++ Y+A +K L
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL---FKCLNE 699
Query: 464 DQMAATLI 471
TL+
Sbjct: 700 KTQGETLL 707
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 105/233 (45%), Gaps = 8/233 (3%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C ++ LI ++++ +I +V L+ G S + N+LI + Y
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
+ ++ K +PD ++N L+ F + + E +E + +M G P + +Y
Sbjct: 567 EMLTDM-------EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKG-LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
++ +C G++ EA KL+++M + + + YN +I F K G +A +EM+
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
+ V N T+ L + ++ + + +M+++ P T+ +L+E L
Sbjct: 680 MKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 20/242 (8%)
Query: 255 MIEEVWNE-----------MERF---GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV 300
++ EVW E + RF G PN ++ C + A + ++
Sbjct: 228 VLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMK 287
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDS 360
L+ +N ++ ++ I + + +M+ + + VT LIN CK VD
Sbjct: 288 NKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE 347
Query: 361 AILVYKDMLQKD------FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
A+ V++ M K + ++ LI+GLC+ R+ EA E++ + P+
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+Y LI C G++E A ++ ++M +P++ + + G + MA M+M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 475 SR 476
+
Sbjct: 468 EK 469
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 170/339 (50%), Gaps = 13/339 (3%)
Query: 139 NNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTC 198
+NA F EM +K ++ + ++ LI+ + D +++R + R I+P +
Sbjct: 264 DNAFNLFNEMEIKGFK---ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
+ LI C K G RE L + + PD ++ L+ GF ++ +++
Sbjct: 321 SALIDCFVK-------EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
+ + M GC PN+ ++NIL+ +C + + +L+ +M ++G+ D YNT+I GF
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
+ G++E A+E F+EM V + V+++ L++G C G+ + A+ +++ + + +
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 379 TIGMLIEGLCEKKRVSEALEIIRN-AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQA 437
++I G+C +V +A ++ + ++ V P K+Y ++I LC+ G + EA L
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVK--PDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 438 KMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
KM G P+ Y+ I + G+ +A LI E+ R
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 151/310 (48%), Gaps = 11/310 (3%)
Query: 170 CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDS 229
CL K D + I RM+ + G P T ++ + K + + R++
Sbjct: 188 CLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKM-------E 239
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
+ +++ D ++ ++ G +DG ++ ++NEME G ++ Y L+ FC G+
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
+ KL +M + + DV A++ +I F K G++ +AEE KEM G+ ++VT+ LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN-AMRDVS 408
+G+CK +D A + M+ K P T +LI G C+ + + LE+ R ++R V
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV- 418
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAA 468
+Y LI+ CE G++E A +L +M + PD+ Y ++G G + A
Sbjct: 419 -VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 469 TLIMEMSRTQ 478
+ ++ +++
Sbjct: 478 EIFEKIEKSK 487
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 140/287 (48%), Gaps = 8/287 (2%)
Query: 174 KKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL 233
K+ D +++ + + +GI+ + T +++I+C +C+ + +I K+
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII-------KLGY 138
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
PD +F+ L+ G +G + E+ + M G P L + N L+ C GK+ +A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L + M G + + Y ++ KSGQ A E ++ME ++ ++V + +I+G C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K G +D+A ++ +M K F+ + LI G C R + +++R+ ++ P
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDV 317
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
++ LI ++G++ EA +L +M +G PD Y + I+G+ K
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 229 SKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM 288
++ R RP + F+ L R + +++ ++ +ME G NLY+ +I++ C K+
Sbjct: 64 TRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKL 123
Query: 289 REAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
A ++ G D ++T+I G G++ +A E M G + +T L
Sbjct: 124 SLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNAL 183
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS 408
+NG C G V A+L+ M++ F+P T G +++ +C+ + + A+E++R M +
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK-MEERK 242
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAA 468
Y ++I LC+DG ++ A L +M KGF+ D+ IY I G+ G A
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 469 TLIMEM 474
L+ +M
Sbjct: 303 KLLRDM 308
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 7/242 (2%)
Query: 150 LKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
L + C F++LI + ID +E+ R + RG+ T N LI +
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 210 GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
+F+E+ R +RPD+ S+ L+ G +GE E E++ ++E+
Sbjct: 437 KLEVAKELFQEMVSRR-------VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
++ YNI++ C K+ +A L+ + +KG++ DV YN +IGG K G + +A+
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
F++ME G N T+ LI + GD + + +++ + F +AST+ M+++ L +
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Query: 390 KK 391
+
Sbjct: 610 GR 611
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
Query: 287 KMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFE 346
K +A L++EM R + ++ + ++ Q + + K+MEL G+ N T
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 347 HLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRD 406
+IN C+ + A +++ + P+ T LI GLC + RVSEALE++ + M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV-DRMVE 170
Query: 407 VSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQM 466
+ P+ + L+ LC +G++ +A+ L +M GF+P+ Y ++ K G +
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 467 AATLIMEM 474
A L+ +M
Sbjct: 231 AMELLRKM 238
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 159/326 (48%), Gaps = 13/326 (3%)
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGS--IEIVRMLRSRGISPQIRT 197
NA L+K ++ PF L SCL + +D S ++V + I P + T
Sbjct: 276 NAAWDILSDLMKNKTPLEAPPFNALL---SCLG-RNMDISRMNDLVLKMDEVKIRPDVVT 331
Query: 198 CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIE 257
+LI+ + K + +F ++ G R D V ++ D FN L+ G + G ++ E
Sbjct: 332 LGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV-IKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 258 EVWNEM---ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
E+ M ER C PN +YN L+ +C GK+ A+++ M+ ++ +V NTI+
Sbjct: 391 ELLVRMKLEER--CAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
GG + + A FF +ME GV+ N VT+ LI+ C V +V+ A+ Y+ ML+
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 375 PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALK 434
P+A LI GLC+ +R +A+ ++ +++ F +Y +LI C+ E+ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEK-LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYE 567
Query: 435 LQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ M +G +PD Y+ I + K
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGK 593
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 204/488 (41%), Gaps = 33/488 (6%)
Query: 5 IVKHFFLSPPKPIKAYHLYSSASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTK 64
+ K L+ K I +SS P + + + SL + R+ + W L L+ +
Sbjct: 232 VWKGRLLTEEKIIALISRFSSHGVSP-NSVWLTRFISSLCKNARANAAWDILSDLMKNKT 290
Query: 65 TLTPIHFSQIALQLKSNPHLA-LRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQAL 123
L F+ + L N ++ + +D + D+ + +++ L ++R +AL
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTLCKSRRVDEAL 349
Query: 124 SIIKSALVSRC---------------LFD--CNNAPVKFFEMLL---KTYRQCDSAPFVF 163
+ + R L D C +K E LL K +C +
Sbjct: 350 EVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTY 409
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
+ LI K++ + E+V ++ I P + T N ++ G C +G+ +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG------GMCRHHGLNMAVVF 463
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
D + K ++ +V ++ L+ +E + +M GC P+ Y L++ C
Sbjct: 464 FMDME-KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
+ +A ++ E+++ G LD+ AYN +IG F EK E +ME G + +S+
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSI 582
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
T+ LI+ + K D +S + + M + P +T G +I+ C + EAL++ ++
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
P+ Y +LI + G +AL L+ +M K P+++ Y+A +K L
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL---FKCLNE 699
Query: 464 DQMAATLI 471
TL+
Sbjct: 700 KTQGETLL 707
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 105/233 (45%), Gaps = 8/233 (3%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C ++ LI ++++ +I +V L+ G S + N+LI + Y
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
+ ++ K +PD ++N L+ F + + E +E + +M G P + +Y
Sbjct: 567 EMLTDM-------EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKG-LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
++ +C G++ EA KL+++M + + + YN +I F K G +A +EM+
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMK 679
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
+ V N T+ L + ++ + + +M+++ P T+ +L+E L
Sbjct: 680 MKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 6/216 (2%)
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G PN ++ C + A + ++ L+ +N ++ ++ I +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD------FRPEASTI 380
+ +M+ + + VT LIN CK VD A+ V++ M K + ++
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 381 GMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMA 440
LI+GLC+ R+ EA E++ + P+ +Y LI C G++E A ++ ++M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 441 GKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+P++ + + G + MA M+M +
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 184/375 (49%), Gaps = 25/375 (6%)
Query: 101 HDLYSYSTIVHILSR-ARL--------KVQALSIIKSALVSRCLFDCNNAPVKFFEM--L 149
HDLYS++T++ R ARL K+ L S + L + +F+E L
Sbjct: 112 HDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSL 171
Query: 150 LKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAK 207
+ P +++ +I S E +++ ++++++ ++ GI P + T N LI+ +
Sbjct: 172 VDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH 231
Query: 208 CKGSCAGYGIFREIFG--LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
+G+ I +R G S PDV +F+ L+ + ++G++ ++ +NEM +
Sbjct: 232 S----GTWGVSARILSDMMRMGIS-----PDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
PN+ +YN L+ C G + EA+K+ + KG + YNT+I G+ K+ +++
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
+ M GV+ ++ T+ L GYC+ G +A V M+ P+ T +L++
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
GLC+ ++ +AL + + + + +Y ++IK LC+ ++E+A L +A KG
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVV-GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVS 461
Query: 446 PDLKIYDAFIEGYKK 460
PD+ Y + G ++
Sbjct: 462 PDVITYITMMIGLRR 476
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 36/337 (10%)
Query: 156 CDSA-----PFVFDL--LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
CD A P + D L+ + +L K + I + R L GIS + + LI C +C
Sbjct: 68 CDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRC 127
Query: 209 KG-----SCAGYGI-----------------------FREIFGLRDGDSKVRLRPDVHSF 240
SC G + F E L D + P+V +
Sbjct: 128 ARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 241 NDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV 300
N ++ G++ +V M++ G P++ +YN L+ G + ++ +M
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDS 360
G+ DV ++ +I + K GQ+ +A++ + EM V N VT+ LING C G +D
Sbjct: 248 MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307
Query: 361 AILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLI 420
A V ++ K F P A T LI G C+ KRV + ++I+ RD +Y L
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD-GVDGDTFTYNTLY 366
Query: 421 KRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ C+ G+ A K+ +M G PD+ ++ ++G
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 189 RGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKV-------RLRPDVHSFN 241
R ++P I T N LI+ G C I GL D KV P+ ++N
Sbjct: 283 RSVNPNIVTYNSLIN------GLC--------IHGLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
L+ G+ + ++ ++ M R G + ++YN L +C GK AEK+ M
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G+ D+ +N ++ G G+I KA ++++ +T+ +I G CK V+ A
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
++ + K P+ T ++ GL K+ EA E+ R ++ P
Sbjct: 449 WYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 227/532 (42%), Gaps = 87/532 (16%)
Query: 14 PKPIKAYHLYSSASTP-PSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTPIHFS 72
PK I + +SS + P P+ Q I+ +S + S W L S +S+ L+
Sbjct: 25 PKLIHGFFSFSSKTNPNPNKQQQILIDYISKSLQ--SNDTWETL-STKFSSIDLSDSLIE 81
Query: 73 QIALQLKSNPHLA---LRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSA 129
I L+ K NP A L FF ++ +L H + SY+ +HIL +ARL + A ++I+S+
Sbjct: 82 TILLRFK-NPETAKQALSFFHWSSHTRNL-RHGIKSYALTIHILVKARLLIDARALIESS 139
Query: 130 LVSRCLFDCNNAP-VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRS 188
L+ N+ P + LL TY S P VFDLL++ +++ ++ ++ + L
Sbjct: 140 LL-------NSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCD 192
Query: 189 RGISPQIRTCNLLISCVAKCK--------GSCA--------------------GYGIFRE 220
G + + T N LI +K K CA G +E
Sbjct: 193 CGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKE 252
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF---GCVPNLYSYNI 277
+ L D R P V L+ +R E IEE + ++R V + Y+I
Sbjct: 253 VVDLLDRICGKRCLPSVIVNTSLV---FRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSI 309
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
++ EG + A K+++EM +G + Y + + G +++AE EME G
Sbjct: 310 VVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESG 369
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
V TF LI G+ + G + + + M+ + P S +++ + + + V+ A
Sbjct: 370 VSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRAN 429
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM------------------ 439
EI+ ++ D F P +Y LI+ E +++ALKL +M
Sbjct: 430 EILTKSI-DKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVG 488
Query: 440 --------AGKGF---------EPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
AG+ + EP+ IYDA I+ ++K+G+ A + EM
Sbjct: 489 LCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 158/354 (44%), Gaps = 33/354 (9%)
Query: 39 TVVSL--LIHHRSKSRWTNLRSLLYSTKTLTPIHFSQIALQLKSN---PHLALRFFFFTL 93
+V++L LIH+ SKS+ +L +Y I+ ++I +++ L+ L
Sbjct: 198 SVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLL 257
Query: 94 DN--SSLCLHDLYSYSTIV-HILSRARLKVQALSIIKSALVSRCLFDCNNAPV------- 143
D CL + +++V +L R++ +++S++K L+ + D +
Sbjct: 258 DRICGKRCLPSVIVNTSLVFRVLEEMRIE-ESMSLLKRLLMKNMVVDTIGYSIVVYAKAK 316
Query: 144 --------KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
K F+ +L+ R + FV+ + ++ C E + + ++ + G+SP
Sbjct: 317 EGDLVSARKVFDEMLQ--RGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD 374
Query: 196 RTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM 255
T N LI A+ G + E+ R L P +FN+++ + +
Sbjct: 375 ETFNCLIGGFARFGWEEKGLE-YCEVMVTRG------LMPSCSAFNEMVKSVSKIENVNR 427
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIG 315
E+ + G VP+ ++Y+ L+ F + +A KL+ EM + + + ++I
Sbjct: 428 ANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Query: 316 GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
G G++E E++ K M+ +E N+ ++ LI + K+GD +A VY +M+
Sbjct: 488 GLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 191/414 (46%), Gaps = 36/414 (8%)
Query: 64 KTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIV--HILSR---ARL 118
K+L+P H ++ L+ + NP A F S H Y++S +V HIL R R+
Sbjct: 6 KSLSPKHVLKL-LKSEKNPRAAFALF------DSATRHPGYAHSAVVYHHILRRLSETRM 58
Query: 119 KVQALSIIKSALVSRCLFD------------CNNAPVKFFEML--LKTYRQCDSAPFVFD 164
I++ C D N+ P + ++ ++ C+ A ++
Sbjct: 59 VNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118
Query: 165 LLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGL 224
L+ + +E K+ + + G++P ++T N+LI K K F + G
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE-------FEKARGF 171
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
D K +PDV S++ ++ + G+++ E+++EM G P++ YNIL+ F
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 285 EGKMREAEKLWEE-MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
E + A +LW+ + + +V +N +I G K G+++ + ++ M+ E +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
T+ LI+G C G+VD A V+ ++ ++ + T ++ G C ++ E+LE+ R
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
S + SY +LIK L E+G+++EA + M KG+ D Y FI G
Sbjct: 352 EHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG 403
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 158/317 (49%), Gaps = 8/317 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F + +I + K+D ++E+ + RG++P + N+LI K K ++
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ DS V P+V + N ++ G + G ++ ++W M++ +LY+Y+ L+
Sbjct: 245 LLE----DSSVY--PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C G + +AE ++ E+ + +DV YNT++GGF + G+I+++ E ++ ME
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SV 357
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N V++ LI G + G +D A ++++ M K + + +T G+ I GLC V++AL ++
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ +Y +I LC+ ++EEA L +M+ G E + + +A I G +
Sbjct: 418 QEVESSGGHLDVY-AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 461 LGNDQMAATLIMEMSRT 477
A+ + EM +
Sbjct: 477 DSRLGEASFFLREMGKN 493
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 164/381 (43%), Gaps = 55/381 (14%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-----------CNNAPVKFFEMLL 150
DLY+YS+++H L A +A S+ + D C +K L
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 151 KTYRQCDSAPFV-FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
+ +S V +++LIK LE KID + I R++ ++G + T
Sbjct: 349 RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT------------ 396
Query: 210 GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
YGIF +H G +G + V E+E G
Sbjct: 397 -----YGIF------------------IH-------GLCVNGYVNKALGVMQEVESSGGH 426
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
++Y+Y ++ C + ++ EA L +EM G+ L+ N +IGG + ++ +A F
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFF 486
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
+EM G V++ LI G CK G A K+ML+ ++P+ T +L+ GLC
Sbjct: 487 LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
+++ ALE+ ++ + +LI LC G++++A+ + A M + +L
Sbjct: 547 DRKIDLALELWHQFLQS-GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 450 IYDAFIEGYKKLGNDQMAATL 470
Y+ +EG+ K+G+ A +
Sbjct: 606 TYNTLMEGFFKVGDSNRATVI 626
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 185/437 (42%), Gaps = 88/437 (20%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
D++SYST+++ L++A AL LFD EM + R
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALE----------LFD---------EM---SERGVAPDVT 220
Query: 162 VFDLLIKSCLELKKIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF-- 218
+++LI L+ K ++E+ R+L + P ++T N++IS ++KC I+
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWER 280
Query: 219 -----RE---------IFGLRDGDS------------KVRLRPDVHSFNDLMMGFYRDGE 252
RE I GL D + + + DV ++N ++ GF R G+
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGL--------- 303
++ E+W ME V N+ SYNIL+ GK+ EA +W M KG
Sbjct: 341 IKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 304 --------------------------RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
LDV AY +II K ++E+A KEM G
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
VE NS LI G + + A ++M + RP + +LI GLC+ + EA
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
++ + + + P K+Y +L+ LC D +++ AL+L + G E D+ +++ I G
Sbjct: 520 AFVKEMLEN-GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 458 YKKLGNDQMAATLIMEM 474
+G A T++ M
Sbjct: 579 LCSVGKLDDAMTVMANM 595
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ + +I + K+++ + +V+ + G+ CN LI + + RE
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ K RP V S+N L+ G + G+ EM G P+L +Y+IL+
Sbjct: 490 M-------GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C + K+ A +LW + GL DV +N +I G G+++ A ME +
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 602
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N VT+ L+ G+ KVGD + A +++ M + +P+ + +++GLC + VS A+E
Sbjct: 603 NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Query: 401 RNAMRDVSFCPSRKSYELLIK 421
+A R+ P+ ++ +L++
Sbjct: 663 DDA-RNHGIFPTVYTWNILVR 682
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
REIFG P + S+N L+ F + +E ++ E G PNL +YN+L
Sbjct: 105 REIFGCE---------PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ + C + + +A + M +G + DV +Y+T+I K+G+++ A E F EM GV
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ-KDFRPEASTIGMLIEGLCEKKRVSEAL 397
+ + LI+G+ K D +A+ ++ +L+ P T ++I GL + RV + L
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+I M+ +Y LI LC+ G +++A + ++ + D+ Y+ + G
Sbjct: 276 KIWER-MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 458 YKKLG 462
+ + G
Sbjct: 335 FCRCG 339
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%)
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
E FGC P + SYN L+ F + + E L+ G+ ++ YN +I K +
Sbjct: 106 EIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEF 165
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
EKA F M G + + ++ +IN K G +D A+ ++ +M ++ P+ + +L
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
I+G ++K A+E+ + D S P+ K++ ++I L + G++++ LK+ +M
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
E DL Y + I G GN A ++ E+
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 129/289 (44%), Gaps = 29/289 (10%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
D+Y+Y++I+ L + + +A +++K +S+ + N+
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKE--MSKHGVELNS--------------------H 465
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
V + LI + ++ + +R + G P + + N+LI + K +E+
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
L +G +PD+ +++ L+ G RD ++++ E+W++ + G ++ +NIL+
Sbjct: 526 --LENG-----WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C GK+ +A + M + ++ YNT++ GF+K G +A + M G++ +
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
+++ ++ G C V A+ + D P T +L+ + +
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 7/283 (2%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
K + E+V +R RG P + + N LI+ K G + L D LR
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAV-----ELLDMVRNSGLR 294
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD ++N L+ RD ++ +V+ +ME C P+L++YN +++++ G EAE+L
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ E+ +KG D YN+++ F + EK +E +++M+ G + +T+ +I+ Y K
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 355 VGDVDSAILVYKDMLQKDFR-PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
G +D A+ +YKDM R P+A T +LI+ L + R EA ++ + M DV P+
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM-SEMLDVGIKPTL 473
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
++Y LI + G+ EEA + M G +PD Y ++
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 4/241 (1%)
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMRE--AEKL 294
V +N +M + R G+ +E+ + M + GCVP+L S+N L+ G + A +L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ +R GLR D YNT++ + ++ A + F++ME + + T+ +I+ Y +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
G A ++ ++ K F P+A T L+ ++R +E ++ + M+ + F
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFA-RERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAG-KGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+Y +I + GQ++ AL+L M G G PD Y I+ K AA L+ E
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 474 M 474
M
Sbjct: 464 M 464
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 150/343 (43%), Gaps = 69/343 (20%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDS 158
C+ DL S++T+++ ARLK L+ N V+ +M+ + + D+
Sbjct: 256 CVPDLISFNTLIN----ARLKSGGLT--------------PNLAVELLDMVRNSGLRPDA 297
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
++ L+ +C +DG++++ + + P + T N +IS +C + +F
Sbjct: 298 --ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 219 REIFGLRDGDSKVRLR---PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
E+ L+ PD ++N L+ F R+ E ++EV+ +M++ G + +Y
Sbjct: 356 MEL----------ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 276 NILMALFCGEGKMR------------------------------------EAEKLWEEMR 299
N ++ ++ +G++ EA L EM
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 300 VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVD 359
G++ + Y+ +I G+ K+G+ E+AE+ F M G + +++ + +++ + +
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
A +Y+DM+ P + ++I GL ++ R + + IR+
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRD 568
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 139/334 (41%), Gaps = 47/334 (14%)
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG--LRDGDSKVRLRPDVHS 239
+V LR G +P ++T N L+S A+C C Y R IF +RDG S P V S
Sbjct: 774 VVGNLRQSGRTPDLKTWNSLMSAYAQC--GC--YERARAIFNTMMRDGPS-----PTVES 824
Query: 240 FNDLMMGFYRDGEME----MIEE-------------------------------VWNEME 264
N L+ DG +E ++EE +++ M+
Sbjct: 825 INILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMK 884
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G +P + Y +++ L C ++R+AE + EM ++++ +N+++ + +
Sbjct: 885 AAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYK 944
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
K + ++ ++ G+E + T+ LI YC+ + L+ + M P+ T LI
Sbjct: 945 KTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLI 1004
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
++K + +A ++ + R Y ++K + G +A KL M G
Sbjct: 1005 SAFGKQKCLEQAEQLFEELLSK-GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
EP L + Y GN Q A ++ + T+
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTE 1097
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 36/223 (16%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L PD ++N L++ + RD E + +M G P L +Y L++ F + + +AE
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+L+EE+ KGL+LD + Y+T++ SG KAE+ + M+ G+E T L+ Y
Sbjct: 1018 QLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSY 1077
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
G+ A V ++ KD E +T+ +I +R
Sbjct: 1078 SSSGNPQEAEKVLSNL--KDTEVELTTLPY--------------SSVIDAYLRS------ 1115
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
K Y I+RL E M +G EPD +I+ F+
Sbjct: 1116 -KDYNSGIERLLE-------------MKKEGLEPDHRIWTCFV 1144
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 307 VTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV-Y 365
V YN ++G + +SG+ KA+E M G + ++F LIN K G + + V
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 366 KDMLQKD-FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLC 424
DM++ RP+A T L+ + A+++ + M P +Y +I
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED-MEAHRCQPDLWTYNAMISVYG 343
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
G EA +L ++ KGF PD Y++ + + + N + + +M +
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 124/228 (54%), Gaps = 1/228 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+V +++ + F + GE+++ + ++ M+R PN+ ++ L+ +C G + A L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
++EMR + L+V Y +I GF K G++++AEE + M VE NS+ + +I+G+ +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
GD D+A+ ML + R + + G++I GLC ++ EA EI+ + M P
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED-MEKSDLVPDMV 339
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+ ++ + G+M+ A+ + K+ +GFEPD+ I+G K G
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 142/281 (50%), Gaps = 19/281 (6%)
Query: 186 LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
++ +SP + T LI K +++E+ +VR+ +V ++ L+
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM-------RRVRMSLNVVTYTALID 241
Query: 246 GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
GF + GEM+ EE+++ M PN Y ++ F G A K +M +G+RL
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
D+TAY II G +G++++A E ++ME + + V F ++N Y K G + +A+ +Y
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS---YELLIKR 422
++++ F P+ + +I+G+ + ++ EA+ V FC + + Y +LI
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAI---------VYFCIEKANDVMYTVLIDA 412
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
LC++G E +L +K++ G PD +Y ++I G K GN
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 147/305 (48%), Gaps = 16/305 (5%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
S++ + L SRG +P + N ++S V K G F E + + PDV
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCK-----LGQVKFAE--DIVHSMPRFGCEPDVI 92
Query: 239 SFNDLMMGFYRDGEM---EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
S+N L+ G R+G++ ++ E F C P++ S+N +LF G KM+ ++++
Sbjct: 93 SYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFN---SLFNGFSKMKMLDEVF 149
Query: 296 EEMRV--KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
M V K +V Y+T I F KSG+++ A + F M+ + N VTF LI+GYC
Sbjct: 150 VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K GD++ A+ +YK+M + T LI+G C+K + A E+ + D P+
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED-RVEPNS 268
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
Y +I + G + A+K AKM +G D+ Y I G G + A ++ +
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 474 MSRTQ 478
M ++
Sbjct: 329 MEKSD 333
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 21/257 (8%)
Query: 117 RLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP--FVFDLLIKSCLELK 174
RL + A +I S L C N +K +++ + D P +F ++ + +
Sbjct: 300 RLDITAYGVIISGL-------CGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
++ ++ + L RG P + + +I +AK G ++ F + + +
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK-NGQLHEAIVY---FCIEKANDVM--- 405
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
+ L+ ++G+ +E +++++ G VP+ + Y +A C +G + +A KL
Sbjct: 406 -----YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
M +GL LD+ AY T+I G G + +A + F EM G+ +S F+ LI Y K
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEK 520
Query: 355 VGDVDSAILVYKDMLQK 371
G++ +A + DM ++
Sbjct: 521 EGNMAAASDLLLDMQRR 537
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 112/275 (40%), Gaps = 37/275 (13%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
V+ +I + D +++ + + ++G+ I ++IS G C G G +E
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS------GLC-GNGKLKE 321
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYS------ 274
+ + K L PD+ F +M +++ G M+ +++++ G P++ +
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Query: 275 ------------------------YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
Y +L+ C EG E E+L+ ++ GL D Y
Sbjct: 382 GIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMY 441
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
+ I G K G + A + M G+ + + + LI G G + A V+ +ML
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN 501
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
P+++ +LI ++ ++ A +++ + R
Sbjct: 502 SGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 190/429 (44%), Gaps = 51/429 (11%)
Query: 83 HLALRFFFFTLDNSSLCLH---DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-- 137
H L F+ + + NS++ ++ + S++ ++ L + R +A+ + + +CL D
Sbjct: 165 HRGLEFYDYVV-NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 138 ---------CNNAPVKFFEMLLKTYRQ--CDSAPFVFDLLIKSCLELKKIDGSIEIVRML 186
C + +LL + C +P ++++LI + + ++V +
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 187 RSRGISPQIRTCNLLIS--CV----------------AKCKGSCAGYGIFREIFGL---R 225
+G P T N LI C+ +KC + YG I GL R
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL--INGLVKQR 341
Query: 226 DGDSKVRLRPDV---------HSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
VRL + H ++ L+ G +++G+ E +W +M GC PN+ Y+
Sbjct: 342 RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 277 ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
+L+ C EGK EA+++ M G + Y++++ GF+K+G E+A + +KEM+
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
G N + LI+G C VG V A++V+ ML +P+ +I+GLC + A
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 397 LEIIRNAM--RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAF 454
L++ + + P +Y +L+ LC + A+ L M +G +PD+ + F
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 455 IEGYKKLGN 463
+ + N
Sbjct: 582 LNTLSEKSN 590
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 129/249 (51%), Gaps = 1/249 (0%)
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
+ + + + P+ SFN ++ + ++ EV+ M C+P+ Y+Y LM C E
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
++ EA L +EM+ +G YN +I G K G + + + M L G N VT+
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
LI+G C G +D A+ + + M+ P T G LI GL +++R ++A+ ++ ++M
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL-SSME 354
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
+ + ++ Y +LI L ++G+ EEA+ L KMA KG +P++ +Y ++G + G
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 466 MAATLIMEM 474
A ++ M
Sbjct: 415 EAKEILNRM 423
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 180/398 (45%), Gaps = 50/398 (12%)
Query: 115 RARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP--FVFDLLIKSCLE 172
R + V++ + + + +++ L+ + ++F++ ++ + + +P F+L+IK+ +
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLY---HRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK 199
Query: 173 LKKIDGSIEIVRMLRSRGISPQIRT-CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKV 231
L+ +D +IE+ R + R P T C L+ G C I + L + S+
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLM-------DGLCKEERIDEAVLLLDEMQSE- 251
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREA 291
P +N L+ G + G++ + ++ + M GCVPN +YN L+ C +GK+ +A
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 292 EKLWEEM-RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLIN 350
L E M K + DVT Y T+I G K + A ME G N + LI+
Sbjct: 312 VSLLERMVSSKCIPNDVT-YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR----- 405
G K G + A+ +++ M +K +P +L++GLC + + +EA EI+ +
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 406 ----------------------------DVSFCPSRK-SYELLIKRLCEDGQMEEALKLQ 436
D + C K Y +LI LC G+++EA+ +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 437 AKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+KM G +PD Y + I+G +G+ A L EM
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 151/316 (47%), Gaps = 8/316 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F ++ +I+ + +D + E+VR L +G P + + N+L+ + G + +
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+F + P+V +++ L+ RDG++E + M+ G P+ YSY+ L+A
Sbjct: 324 MF-------SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
FC EG++ A + E M G D+ YNT++ K+G+ ++A E F ++ G
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
NS ++ + + GD A+ + +M+ P+ T +I LC + V EA E++
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ MR F PS +Y +++ C+ ++E+A+ + M G G P+ Y IEG
Sbjct: 497 VD-MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555
Query: 461 LGNDQMAATLIMEMSR 476
G A L ++ R
Sbjct: 556 AGYRAEAMELANDLVR 571
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 180/400 (45%), Gaps = 34/400 (8%)
Query: 105 SYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAP--VKFFEMLLKTYRQCDSAPFV 162
+Y +H+L K +I + + F N P V+ E+L K + Q D F
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDV--FA 160
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA---------------- 206
++ LI ++ +ID + ++ +RS+ SP T N++I +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 207 --KCKGSCAGYGIFREIFGLRDG-DSKVRL---------RPDVHSFNDLMMGFYRDGEME 254
C+ + Y I E L G D ++L +PD+ ++N ++ G ++G ++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 255 MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
E+ +E GC P++ SYNIL+ +GK E EKL +M + +V Y+ +I
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
+ G+IE+A K M+ G+ ++ +++ LI +C+ G +D AI + M+
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 375 PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALK 434
P+ ++ LC+ + +ALEI + +V P+ SY + L G AL
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIF-GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 435 LQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ +M G +PD Y++ I + G A L+++M
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 9/243 (3%)
Query: 138 CNNAPVKFFEMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
C + ++ LLK ++ P + +D LI + ++D +IE + + S G P I
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 196 RTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM 255
N +++ + CK A + EIFG +V P+ S+N + + G+
Sbjct: 404 VNYNTVLATL--CKNGKADQAL--EIFGKL---GEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIG 315
+ EM G P+ +YN +++ C EG + EA +L +MR V YN ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 316 GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP 375
GF K+ +IE A + M G N T+ LI G G A+ + D+++ D
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Query: 376 EAS 378
E S
Sbjct: 577 EYS 579
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 187/446 (41%), Gaps = 62/446 (13%)
Query: 64 KTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQAL 123
K T ++ + I +KSN L L + F S C D ++Y+ ++H
Sbjct: 177 KPSTRLYNAVIDALVKSN-SLDLAYLKFQQMRSDGCKPDRFTYNILIH------------ 223
Query: 124 SIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIE 181
+ K +V + L+K Q + P F + +LI L ++D +++
Sbjct: 224 GVCKKGVVDEAI------------RLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALK 271
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVR--------- 232
+ M+R R ++P T + + +C C + + + G + DS ++
Sbjct: 272 QLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEV---LVGFMEKDSNLQRVGYDAVLY 328
Query: 233 --------------LR--------PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
LR PD +FN M + ++ +++ G P
Sbjct: 329 CLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKP 388
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
Y +L+ + E ++ ++M V GL V +YN +I K+ +IE A F
Sbjct: 389 GFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFL 448
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
EM+ G+ N VTF ++GY GDV V + +L F+P+ T ++I LC
Sbjct: 449 TEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRA 508
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
K + +A + + M + P+ +Y +LI+ C G + ++KL AKM G PDL
Sbjct: 509 KEIKDAFDCFKE-MLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYA 567
Query: 451 YDAFIEGYKKLGNDQMAATLIMEMSR 476
Y+A I+ + K+ + A L+ M R
Sbjct: 568 YNATIQSFCKMRKVKKAEELLKTMLR 593
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 188 SRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGF 247
SRG+ P +L+ + + G +++ G+ DG L V+S+N ++
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM-GV-DG-----LLSSVYSYNAVIDCL 435
Query: 248 YRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDV 307
+ +E EM+ G PNL ++N ++ + G +++ + E++ V G + DV
Sbjct: 436 CKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDV 495
Query: 308 TAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKD 367
++ II ++ +I+ A + FKEM G+E N +T+ LI C GD D ++ ++
Sbjct: 496 ITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAK 555
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDG 427
M + P+ I+ C+ ++V +A E+++ +R + P +Y LIK L E G
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLR-IGLKPDNFTYSTLIKALSESG 614
Query: 428 QMEEALKLQAKMAGKGFEPD 447
+ EA ++ + + G PD
Sbjct: 615 RESEAREMFSSIERHGCVPD 634
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 158 SAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY-- 215
S+ + ++ +I + ++I+ + + ++ RGISP + T N +S GY
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLS----------GYSV 472
Query: 216 -GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYS 274
G +++ G+ + +PDV +F+ ++ R E++ + + EM +G PN +
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
YNIL+ C G + KL+ +M+ GL D+ AYN I F K +++KAEE K M
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G++ ++ T+ LI + G A ++ + + P++ T KR+
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT-----------KRLV 641
Query: 395 EALEIIRNAM 404
E L++ ++ +
Sbjct: 642 EELDLRKSGL 651
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 46/239 (19%)
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGE----GKMREAEKLWEEMRVKGLRLDVT 308
ME+++E+ + R + LM + G G + ++ ++ G++
Sbjct: 130 MELLKEIRDSGYRIS--------DELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTR 181
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
YN +I KS ++ A F++M G + + T+ LI+G CK G VD AI + K M
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALE---------------IIRNAMRDVSFC-PS 412
Q+ RP T +LI+G RV EAL+ IR + + C P
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP 301
Query: 413 RKSYELLIKRLCEDGQME------------------EALKLQAKMAGKGFEPDLKIYDA 453
K++E+L+ + +D ++ E + K+ +G+ PD ++A
Sbjct: 302 CKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNA 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
++P +N ++ + +++ + +M GC P+ ++YNIL+ C +G + EA
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAI 235
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+L ++M +G R +V Y +I GF +G++++A + + M + + N T ++G
Sbjct: 236 RLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGI 295
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+ A V ++KD + ++ L E + +R + + + P
Sbjct: 296 FRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK-IGERGYIPD 354
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
++ + L + + E ++ +G +P Y ++
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQA 399
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 190/434 (43%), Gaps = 69/434 (15%)
Query: 79 KSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDC 138
+ N LAL+ F + + H+ +Y +I+ LSRAR A ++S + D
Sbjct: 59 QQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRAR----AFDPVESLMA-----DL 109
Query: 139 NNA--PVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIR 196
N+ P+K C F+ DLL L + + S+ I + G+ +R
Sbjct: 110 RNSYPPIK-----------CGENLFI-DLLRNYGLA-GRYESSMRIFLRIPDFGVKRSVR 156
Query: 197 TCNLLISCVAKCKGSCAGYGIFR---EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
+ N L++ + + + + +F+ E FG+ P++ + N L+ + ++
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGIT---------PNIFTCNLLVKALCKKNDI 207
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
E +V +E+ G VPNL +Y ++ + G M A+++ EEM +G D T Y +
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
+ G+ K G+ +A +ME +E N VT+ +I CK A ++ +ML++ F
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIR-----NAMRDVSF------------------- 409
P++S +I+ LCE +V EA + R N M D +
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Query: 410 ---------CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
PS +Y LI +CE G++ EA +L M + +P+ Y+ IEG K
Sbjct: 388 LFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
Query: 461 LGNDQMAATLIMEM 474
GN + ++ EM
Sbjct: 448 NGNVKEGVRVLEEM 461
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVW-NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
V S N L+ ++ +++ ++ N E FG PN+++ N+L+ C + + A K+
Sbjct: 155 VRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+E+ GL ++ Y TI+GG+ G +E A+ +EM G ++ T+ L++GYCK+
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G A V DM + + P T G++I LC++K+ EA + + M + SF P
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMF-DEMLERSFMPDSSL 333
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
+I LCED +++EA L KM PD + I K G A L E
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE 393
Query: 476 R 476
+
Sbjct: 394 K 394
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 129/272 (47%), Gaps = 12/272 (4%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ +L+ +L + + ++ + I P T ++I + K K S +F E+
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ PD ++ D +++ +W +M + C+P+ + L+
Sbjct: 323 L-------ERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 375
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C EG++ EA KL++E KG + YNT+I G + G++ +A + +M + N
Sbjct: 376 LCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+ T+ LI G K G+V + V ++ML+ P +T +L EGL + + +A++I+
Sbjct: 435 AFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
A+ + ++S+EL +K+ G++++ +
Sbjct: 495 MAVMNGKV--DKESWELFLKKFA--GELDKGV 522
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK-DFRPEAS 378
+G+ E + F + GV+ + + L+N + D ++K+ + P
Sbjct: 133 AGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIF 192
Query: 379 TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAK 438
T +L++ LC+K + A +++ + + + P+ +Y ++ G ME A ++ +
Sbjct: 193 TCNLLVKALCKKNDIESAYKVL-DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 439 MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
M +G+ PD Y ++GY KLG AAT++ +M + +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 15/320 (4%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAK---CKGSCAGYGIFR 219
F L+I E D + + L+S G+S +LIS AK + + +G +
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 220 EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIE-EVWNEMERFGCVPNLYSYNIL 278
E RPDV ++N ++ R+ M+ V+NEM + C PNLY++ IL
Sbjct: 155 EF----------DCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGIL 204
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
M +G+ +A+K++++M +G+ + Y +I G + G + A + F EM+ G
Sbjct: 205 MDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGN 264
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
+SV L++G+CK+G + A + + + F LI+GL +R ++A E
Sbjct: 265 YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFE 324
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+ N ++ + P Y +LI+ L + G++E+ALKL + M KG PD Y+A I+
Sbjct: 325 LYANMLKK-NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL 383
Query: 459 KKLGNDQMAATLIMEMSRTQ 478
G + +L +EMS T+
Sbjct: 384 CGRGLLEEGRSLQLEMSETE 403
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ F +LI + ++ + ++E ++ P + T N+++ + + + F
Sbjct: 128 YCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEV------FFML 181
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
F + + K P++++F LM G Y+ G ++++++M G PN +Y IL++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C G +A KL+ EM+ G D A+N ++ GF K G++ +A E + E G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ LI+G + A +Y +ML+K+ +P+ +LI+GL + ++ +AL+++
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
++M P Y +IK LC G +EE LQ +M+ PD
Sbjct: 362 -SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPD 407
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 16/313 (5%)
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
+ L+ +L ++ + E++R+ G +R + LI + + + + ++ +
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML- 330
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
K ++PD+ + L+ G + G++E ++ + M G P+ Y YN ++ C
Sbjct: 331 ------KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALC 384
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
G G + E L EM D + +I ++G + +AEE F E+E G +
Sbjct: 385 GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
TF LI+G CK G++ A L+ M + RP + + + G + E+ I++ A
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKM--EVGRPASLFLRLSHSGNRSFDTMVESGSILK-A 501
Query: 404 MRDVSF------CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
RD++ P SY +LI C G ++ ALKL + KG PD Y+ I G
Sbjct: 502 YRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLING 561
Query: 458 YKKLGNDQMAATL 470
++G ++ A L
Sbjct: 562 LHRVGREEEAFKL 574
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 166/418 (39%), Gaps = 80/418 (19%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQ--- 155
C D+++Y+ I+ ++ R + FF + Y +
Sbjct: 158 CRPDVFTYNVILRVMMREEV--------------------------FFMLAFAVYNEMLK 191
Query: 156 CDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
C+ +P + F +L+ + + + ++ + RGISP T +LIS + + +
Sbjct: 192 CNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADD 251
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
+F E+ G+ PD + N L+ GF + G M E+ E+ G V L
Sbjct: 252 ARKLFYEM--QTSGNY-----PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
Y+ L+ + +A +L+ M K ++ D+ Y +I G K+G+IE A + M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
G+ ++ + +I C G ++ + +M + + P+A T +LI +C V
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 394 SEALEIIRNAMRDVSFC-PSRKSYELLIKRLCEDGQMEEALKLQAKM------------- 439
EA EI + S C PS ++ LI LC+ G+++EA L KM
Sbjct: 425 REAEEIFTEIEK--SGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482
Query: 440 --------------------------AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
A G PD+ Y+ I G+ + G+ A L+
Sbjct: 483 HSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 46/292 (15%)
Query: 181 EIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSF 240
EI + G SP + T N LI + K + ++ R +RL +
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 241 NDLMMGFYRDGEMEMIEEVWNEMERF---GCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
D M+ E I + + ++ F G P++ SYN+L+ FC G + A KL
Sbjct: 489 FDTMV------ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
+++KGL D YNT+I G ++ G+ E+A + F + + + L+ C+
Sbjct: 543 LQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKD--DFRHSPAVYRSLMTWSCRKRK 600
Query: 358 VDSAILVYKDMLQK-------------------------------DFRPEASTIG---ML 383
V A ++ L+K D R + T+G +
Sbjct: 601 VLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW 660
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
+ GLC+ R EAL ++ + +R+ + S LI LC+ Q++ A+++
Sbjct: 661 LIGLCQSGRFHEAL-MVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEV 711
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 12/259 (4%)
Query: 190 GISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYR 249
G SP I + N+LI+ + G G + L+ L PD ++N L+ G +R
Sbjct: 512 GSSPDIVSYNVLINGFCRA-GDIDGALKLLNVLQLKG------LSPDSVTYNTLINGLHR 564
Query: 250 DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTA 309
G E +++ + F P +Y LM C + K+ A LW + K LD
Sbjct: 565 VGREEEAFKLFYAKDDFRHSPAVYRS--LMTWSCRKRKVLVAFNLWMKYLKKISCLDDET 622
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
N I F K G+ E+A E++ E + + G C+ G A++V+ +
Sbjct: 623 ANEIEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLR 681
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ- 428
+K + LI GLC+++++ A+E+ + D +F + L+ L E +
Sbjct: 682 EKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTL-DNNFKLMPRVCNYLLSSLLESTEK 740
Query: 429 MEEALKLQAKMAGKGFEPD 447
ME +L +M G+ D
Sbjct: 741 MEIVSQLTNRMERAGYNVD 759
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 33/362 (9%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEML--LKTYRQCDS 158
+ +Y++S ++ R+ L +A+S+ S +K + + L TY
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNS--------------MKEYGLRPNLVTYNA--- 308
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
V D K +E K++ + ++ G+ P T N L++ C+ G++
Sbjct: 309 ---VIDACGKGGMEFKQV---AKFFDEMQRNGVQPDRITFNSLLAV-------CSRGGLW 355
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
L D + R+ DV S+N L+ + G+M++ E+ +M +PN+ SY+ +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ F G+ EA L+ EMR G+ LD +YNT++ + K G+ E+A + +EM G+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
+ + VT+ L+ GY K G D V+ +M ++ P T LI+G + EA+E
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
I R + Y LI LC++G + A+ L +M +G P++ Y++ I+ +
Sbjct: 536 IFRE-FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 459 KK 460
+
Sbjct: 595 GR 596
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 136/292 (46%), Gaps = 11/292 (3%)
Query: 187 RSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMG 246
R R + Q + + +IS + + IF F G++ V++F+ L+
Sbjct: 225 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNT-------VYAFSALISA 277
Query: 247 FYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM--REAEKLWEEMRVKGLR 304
+ R G E V+N M+ +G PNL +YN ++ CG+G M ++ K ++EM+ G++
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQ 336
Query: 305 LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV 364
D +N+++ + G E A F EM +E + ++ L++ CK G +D A +
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 365 YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLC 424
M K P + +I+G + R EAL + MR + R SY L+
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF-GEMRYLGIALDRVSYNTLLSIYT 455
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+ G+ EEAL + +MA G + D+ Y+A + GY K G + EM R
Sbjct: 456 KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 7/316 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ F LI + + +I + ++ G+ P + T N +I K G F++
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK------GGMEFKQ 322
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ D + ++PD +FN L+ R G E +++EM +++SYN L+
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C G+M A ++ +M VK + +V +Y+T+I GF K+G+ ++A F EM G+
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ V++ L++ Y KVG + A+ + ++M + + T L+ G ++ + E ++
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
R+ P+ +Y LI + G +EA+++ + G D+ +Y A I+ K
Sbjct: 503 TEMKRE-HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 461 LGNDQMAATLIMEMSR 476
G A +LI EM++
Sbjct: 562 NGLVGSAVSLIDEMTK 577
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 7/197 (3%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
+ +I + + D ++ + +R GI+ + N L+S K S I RE+
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM- 470
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
+ V ++ DV ++N L+ G+ + G+ + +++V+ EM+R +PNL +Y+ L+ +
Sbjct: 471 ------ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
G +EA +++ E + GLR DV Y+ +I K+G + A EM G+ N
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 343 VTFEHLINGYCKVGDVD 359
VT+ +I+ + + +D
Sbjct: 585 VTYNSIIDAFGRSATMD 601
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 195/463 (42%), Gaps = 51/463 (11%)
Query: 53 WTNLRSLLYSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHI 112
W SL + P SQ+ +S+ + +RFF + +SS C + I
Sbjct: 54 WEKNSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLI 113
Query: 113 LSRARLKVQALSIIKSALVSRC---------LFDCNNAPVKFFEMLLK------------ 151
+S +V I+ AL+ C L C + + F L
Sbjct: 114 VSSGLYRVAHAVIV--ALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLA 171
Query: 152 ----------TYRQCDSAPFVFDLL-IKSCLELKKIDGSIEIVRMLRSR------GISPQ 194
TYR+ ++ FV ++ ++ + +G E M S+ +
Sbjct: 172 KLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSH 231
Query: 195 IRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSK-VRLRPDVHSFNDLMMGFYRDGEM 253
I T LL G C G + R+ + D SK V P+ S++ L+ G G +
Sbjct: 232 IGTSLLL--------GFCRGLNL-RDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
E + ++M GC P+ +Y +L+ C G + +A L++EM +G + +V Y +
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I G + G+IE+A ++M + + +T+ LINGYCK G V A + M ++
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
+P T L+EGLC + +A+ +++ M D P SY +LI LC +G M A
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKR-MLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 434 KLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
KL + M EPD + A I + K G +A+ + M R
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 8/310 (2%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
+ C + + +LIK+ + ID + + + RG P + T +LI G C
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLID------GLCR 348
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
G E G+ K R+ P V ++N L+ G+ +DG + E+ ME+ C PN+
Sbjct: 349 D-GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
++N LM C GK +A L + M GL D+ +YN +I G + G + A + M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
+E + +TF +IN +CK G D A ML+K + T LI+G+C+ +
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
+AL I+ ++ + + S +++ L + +++E L + K+ G P + Y
Sbjct: 528 RDALFILETLVK-MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586
Query: 454 FIEGYKKLGN 463
++G + G+
Sbjct: 587 LVDGLIRSGD 596
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 1/252 (0%)
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G E FGL+D + +P ++ L+ G ++ +++EM GC PN+++Y
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
+L+ C +GK+ EA + +M + V YN +I G+ K G++ A E ME
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
+ N TF L+ G C+VG A+ + K ML P+ + +LI+GLC + ++
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
A +++ ++M P ++ +I C+ G+ + A M KG D I
Sbjct: 460 AYKLL-SSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Query: 456 EGYKKLGNDQMA 467
+G K+G + A
Sbjct: 519 DGVCKVGKTRDA 530
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 229 SKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM 288
+K+ L P V ++ L+ G R G++ + M+ GC+PN+Y Y I++ C G++
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 289 REAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
EAEKL M+ G+ + Y ++ G+ +G++++A E + M G E N + L
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
Query: 349 INGYC--KVGDVDSAILVYKDMLQKDFRPE--------ASTIGMLIEG--------LCEK 390
+ G+ + G +S D+ ++ PE +G I G LC++
Sbjct: 693 LQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKE 752
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
R E+ ++++N + F K+ +++++ C + + ++L + GF P K
Sbjct: 753 GRTDESNDLVQNVLERGVFL--EKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKS 810
Query: 451 YDAFIEGYKKLGNDQMAATLIMEM 474
+ I+G KK G+ + A L+ME+
Sbjct: 811 FCLVIQGLKKEGDAERARELVMEL 834
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 146/333 (43%), Gaps = 43/333 (12%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
++ LI + ++ + E++ ++ R P +RT N L+ + + + +
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ L +G L PD+ S+N L+ G R+G M ++ + M F P+ ++ ++
Sbjct: 432 M--LDNG-----LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA----EEFFK----- 331
FC +GK A M KG+ LD T+I G K G+ A E K
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 332 ------------------EMELG--------GVESNSVTFEHLINGYCKVGDVDSAILVY 365
+ EL G+ + VT+ L++G + GD+ + +
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
+ M P ++I GLC+ RV EA E + +AM+D P+ +Y +++K
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEA-EKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+G+++ AL+ M +G+E + +IY + ++G+
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 163/350 (46%), Gaps = 43/350 (12%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+++ +I+S ELK + + E++ + + G I N+LI + K + GI ++
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM------------------------- 255
+ G +D L+PDV ++ L+ G + E E+
Sbjct: 288 LAG-KD------LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 256 -------IEEVWNEMER---FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
IEE N ++R FG PNL+ YN L+ C K EAE L++ M GLR
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
+ Y+ +I F + G+++ A F EM G++ + + LING+CK GD+ +A
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
+M+ K P T L+ G C K ++++AL + + M PS ++ L+ L
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY-HEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
G + +A+KL +MA +P+ Y+ IEGY + G+ A + EM+
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 43/335 (12%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
KI+ ++ +V+ + G+SP + N LI + CKG F E L D K+ LR
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSL--CKGR-----KFHEAELLFDRMGKIGLR 399
Query: 235 PD-----------------------------------VHSFNDLMMGFYRDGEMEMIEEV 259
P+ V+ +N L+ G + G++ E
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
EM P + +Y LM +C +GK+ +A +L+ EM KG+ + + T++ G ++
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+G I A + F EM V+ N VT+ +I GYC+ GD+ A K+M +K P+ +
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
LI GLC + SEA ++ + + + + Y L+ C +G++EEAL + +M
Sbjct: 580 YRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+G + DL Y I+G K + ++ L+ EM
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 145/351 (41%), Gaps = 78/351 (22%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
KI+ ++ + + +GI+P I T L+S + + G+ R+ L + ++ ++
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA-------GLIRDAVKLFNEMAEWNVK 539
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY------------------- 275
P+ ++N ++ G+ +G+M E EM G VP+ YSY
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 276 ----------------NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
L+ FC EGK+ EA + +EM +G+ LD+ Y +I G K
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+ KEM G++ + V + +I+ K GD A ++ M+ + P T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR-------------------------- 413
+I GLC+ V+EA E++ + M+ VS P++
Sbjct: 720 YTAVINGLCKAGFVNEA-EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 414 ---------KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
+Y +LI+ C G++EEA +L +M G G PD Y I
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 176 IDGSIE---------IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRD 226
IDGS++ +++ + RG+ P +I +K G F+E FG+ D
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT-------GDFKEAFGIWD 706
Query: 227 GDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC-GE 285
P+ ++ ++ G + G + E + ++M+ VPN +Y + + GE
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE 766
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
M++A +L + +KGL + YN +I GF + G+IE+A E M GV + +T+
Sbjct: 767 VDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
+IN C+ DV AI ++ M +K RP+ LI G C + +A E +RN M
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE-LRNEML 884
Query: 406 DVSFCPSRKS 415
P+ K+
Sbjct: 885 RQGLIPNNKT 894
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 10/276 (3%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
K++ ++ + + + RG+ + +LI K K +G+ +E+ L+
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM-------HDRGLK 679
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD + ++ + G+ + +W+ M GCVPN +Y ++ C G + EAE L
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSG-QIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+M+ + Y + K ++KA E + L G+ +N+ T+ LI G+C
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFC 798
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ G ++ A + M+ P+ T +I LC + V +A+E+ N+M + P R
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW-NSMTEKGIRPDR 857
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
+Y LI C G+M +A +L+ +M +G P+ K
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 184/435 (42%), Gaps = 49/435 (11%)
Query: 71 FSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSAL 130
+ I +L+ NP L F D +Y +VHILSRAR Q KS L
Sbjct: 73 LNSILRRLRLNPEACLEIFNLASKQQKF-RPDYKAYCKMVHILSRARNYQQT----KSYL 127
Query: 131 VSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRG 190
L N++ + L++ +++ +P VFD+++K E + ++ + + + G
Sbjct: 128 CE--LVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYG 185
Query: 191 -----------------------------------ISPQIRTCNLLISCVAKCKGSCAGY 215
+SP + TC+++++ C
Sbjct: 186 RIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVN------AYCRSG 239
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
+ + + ++ +S + L +V ++N L+ G+ G++E + V M G N+ +Y
Sbjct: 240 NVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTY 299
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
L+ +C +G M EAE ++E ++ K L D Y ++ G+ ++GQI A M
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
GV +N+ LINGYCK G + A ++ M +P+ T L++G C V E
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
AL++ + M P+ +Y +L+K G + L L M +G D +
Sbjct: 420 ALKLC-DQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 456 EGYKKLGNDQMAATL 470
E KLG+ A L
Sbjct: 479 EALFKLGDFNEAMKL 493
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 164/347 (47%), Gaps = 43/347 (12%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA--------- 213
++ LI + ++G ++R++ RG+S + T LI KG C
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLI------KGYCKKGLMEEAEH 317
Query: 214 ----------------------GY---GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFY 248
GY G R+ + D ++ +R + N L+ G+
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
+ G++ E++++ M + P+ ++YN L+ +C G + EA KL ++M K + V
Sbjct: 378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
YN ++ G+ + G +K M GV ++ ++ L+ K+GD + A+ +++++
Sbjct: 438 TYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV 497
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC-PSRKSYELLIKRLCEDG 427
L + + T+ ++I GLC+ ++V+EA EI+ N ++ C P+ ++Y+ L + G
Sbjct: 498 LARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV--NIFRCKPAVQTYQALSHGYYKVG 555
Query: 428 QMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
++EA ++ M KG P +++Y+ I G K + A L++E+
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 158/375 (42%), Gaps = 53/375 (14%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
+ ++M+LK R ++ L+++ +L + ++++ + +RG+ T N++I
Sbjct: 456 LSLWKMMLK--RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
S + K + E + D + R +P V ++ L G+Y+ G ++ V
Sbjct: 514 SGLCKMEK-------VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWE---EMRVKGLRLDVTAYNTIIGGFYK 319
MER G P + YN L++ G K R K+ + E+R +GL V Y +I G+
Sbjct: 567 MERKGIFPTIEMYNTLIS---GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR----- 374
G I+KA EM G+ N + N ++ +D A L+ + ++ D
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683
Query: 375 ---------------------------------PEASTIGMLIEGLCEKKRVSEALEIIR 401
P + I GLC+ ++ +A ++
Sbjct: 684 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
+ + F P +Y +LI G + +A L+ +MA KG P++ Y+A I+G KL
Sbjct: 744 DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL 803
Query: 462 GNDQMAATLIMEMSR 476
GN A L+ ++ +
Sbjct: 804 GNVDRAQRLLHKLPQ 818
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 119/270 (44%), Gaps = 32/270 (11%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS----------CVAKC--- 208
+++ LI + + ++ ++V LR+RG++P + T LI+ A C
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 209 --KGSCAGYGIFREI----FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM--------- 253
KG I +I F L D L + F+ L+ G+ E
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697
Query: 254 ---EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL-DVTA 309
++ E V N + VPN YN+ +A C GK+ +A KL+ ++ + D
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
Y +I G +G I KA EM L G+ N VT+ LI G CK+G+VD A + +
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
QK P A T LI+GL + V+EA+ +
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRL 847
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 155/363 (42%), Gaps = 49/363 (13%)
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCN 199
N +K +E +L R + +++I +++K++ + EI+ + P ++T
Sbjct: 488 NEAMKLWENVLA--RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ 545
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
L K G +E F +++ + + P + +N L+ G ++ + + ++
Sbjct: 546 ALSHGYYKV-------GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
E+ G P + +Y L+ +C G + +A EM KG+ L+V + I ++
Sbjct: 599 VIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFR 658
Query: 320 SGQIEKAEEFFK-----EMELGGVES---------------------------------N 341
+I++A + ++ L G +S N
Sbjct: 659 LDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPN 718
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKD-FRPEASTIGMLIEGLCEKKRVSEALEII 400
++ + I G CK G ++ A ++ D+L D F P+ T +LI G +++A +
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAF-TL 777
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
R+ M P+ +Y LIK LC+ G ++ A +L K+ KG P+ Y+ I+G K
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 461 LGN 463
GN
Sbjct: 838 SGN 840
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 143/361 (39%), Gaps = 47/361 (13%)
Query: 155 QCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSC 212
Q + P V +++L+K + + + +M+ RG++ +C+ L+ + K
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK----- 483
Query: 213 AGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNL 272
G F E L + L D + N ++ G + ++ +E+ + + F C P +
Sbjct: 484 --LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
+Y L + G ++EA + E M KG+ + YNT+I G +K + K + E
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
+ G+ T+ LI G+C +G +D A +M++K + + L +
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661
Query: 393 VSEA-------------------------------------LEIIRNAMRDVSFCPSRKS 415
+ EA E + N+ P+
Sbjct: 662 IDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIV 721
Query: 416 YELLIKRLCEDGQMEEALKLQAK-MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
Y + I LC+ G++E+A KL + ++ F PD Y I G G+ A TL EM
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 475 S 475
+
Sbjct: 782 A 782
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM---ERFGCVPNLYSYNILMALFCGEGKMR 289
L P+ +N + G + G++E ++++++ +RF +P+ Y+Y IL+ G +
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF--IPDEYTYTILIHGCAIAGDIN 772
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
+A L +EM +KG+ ++ YN +I G K G +++A+ ++ G+ N++T+ LI
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 350 NGYCKVGDVDSAILVYKDMLQK 371
+G K G+V A+ + + M++K
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEK 854
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 33/257 (12%)
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
F++LL Y+ S + +CL+ +KI S+E + + P N+ I+ +
Sbjct: 675 FDLLLPGYQ---SLKEFLEASATTCLKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGL 729
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
K +F ++ S R PD +++ L+ G G++ + +EM
Sbjct: 730 CKAGKLEDARKLFSDLL------SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMAL 783
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
G +PN+ +YN L+ C G + A++L ++ KG+ + YNT+I G KSG + +
Sbjct: 784 KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 843
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE-----ASTI 380
A ++M G L+ G K GDVD V D PE I
Sbjct: 844 AMRLKEKMIEKG----------LVRGSDKQGDVDIPKEVVLD-------PEVKLGSTGVI 886
Query: 381 GMLIEGLCEKKRVSEAL 397
M L + +RVSEA+
Sbjct: 887 EMNSNELYDVRRVSEAV 903
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 145/281 (51%), Gaps = 9/281 (3%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ LIK+ L++ + G++E++R + +GI T N ++ + K + E
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK-------LDEA 470
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
L + K D ++ L+MGF+R+ ++E E+W+EM++ P + ++N L+
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C GK A + ++E+ GL D + +N+II G+ K G++EKA EF+ E + +
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+ T L+NG CK G + A+ + +++ + + T +I C+ K++ EA +++
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLL- 648
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
+ M + P R +Y I L EDG++ E +L K +GK
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 13/288 (4%)
Query: 170 CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDS 229
C E K+ + ++ ++ G SP I T + LI K + RE+ G
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM-----GQK 445
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
+++ + + N ++ ++ +++ + N + G + + +Y L+ F E K+
Sbjct: 446 GIKM--NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
+A ++W+EM+ + V+ +N++IGG G+ E A E F E+ G+ + TF +I
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM--RDV 407
GYCK G V+ A Y + ++ F+P+ T +L+ GLC++ +AL + R+V
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
+Y +I C+D +++EA L ++M KG EPD Y++FI
Sbjct: 624 DTV----TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 47/290 (16%)
Query: 230 KVRLRPDVHSFNDLMMGFYR---DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG 286
+++L+P++ + N L++G R + EV+++M + G N+ ++N+L+ +C EG
Sbjct: 159 RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEG 218
Query: 287 KMREA----EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
K+ +A E++ E +V D YNTI+ K G++ +E +M+ G+ N
Sbjct: 219 KLEDALGMLERMVSEFKVNP---DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNR 275
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
VT+ +L+ GYCK+G + A + + M Q + P+ T +LI GLC + E LE++ +
Sbjct: 276 VTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM-D 334
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG------------------- 443
AM+ + P +Y LI E G EA KL +M G
Sbjct: 335 AMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE 394
Query: 444 -----------------FEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
F PD+ Y I+ Y K+G+ A ++ EM +
Sbjct: 395 KREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 208/459 (45%), Gaps = 31/459 (6%)
Query: 14 PKPIKAYHLYSSASTP---PSDQS-HIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTPI 69
P+ + ++ ++ S P PSD ++S V SLL HH+ + + +SLL S +
Sbjct: 55 PETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHK----FADAKSLLVSYIRTSDA 110
Query: 70 HFSQIALQLKSNPHLAL----RFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQA-LS 124
S L N HL+ F L S LH+ + + RLK++ L
Sbjct: 111 SLSLCNSLLHPNLHLSPPPSKALFDIAL---SAYLHEGKPHVALQIFQKMIRLKLKPNLL 167
Query: 125 IIKSALVSRCLFDCN---NAPVKFFEMLLKTYRQCDSAPFVFDLLIKS-CLELKKIDGSI 180
+ L+ + + ++ + F+ ++K + F++L+ CLE K D
Sbjct: 168 TCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQ--TFNVLVNGYCLEGKLEDALG 225
Query: 181 EIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSF 240
+ RM+ ++P T N ++ ++K G ++ L K L P+ ++
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSK-------KGRLSDLKELLLDMKKNGLVPNRVTY 278
Query: 241 NDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV 300
N+L+ G+ + G ++ ++ M++ +P+L +YNIL+ C G MRE +L + M+
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDS 360
L+ DV YNT+I G ++ G +A + ++ME GV++N VT + CK ++
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 361 AILVYKDMLQ-KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
K+++ F P+ T LI+ + +S ALE++R M + + +
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE-MGQKGIKMNTITLNTI 457
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+ LC++ +++EA L +GF D Y I G+
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING---YCKVGDVDSAILVYK 366
++ + + G+ A + F++M ++ N +T L+ G Y + SA V+
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 367 DMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCED 426
DM++ T +L+ G C + ++ +AL ++ + + P +Y ++K + +
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 427 GQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
G++ + +L M G P+ Y+ + GY KLG+ + A ++ M +T
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 210/459 (45%), Gaps = 51/459 (11%)
Query: 22 LYSSASTPPSDQSHIVSTVVSLLIHHRS--KSRW-TNLRSLLYSTKT------------- 65
+++S+S PP + + V L+ +R+ S W + + +LL + +
Sbjct: 52 VFNSSSLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFL 111
Query: 66 --LTP--IHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQ 121
L+P + F + +++ P +A FF ++ H+L Y ++V +L+ A+ V
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKY-THNLECYVSLVDVLALAK-DVD 169
Query: 122 ALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIE 181
+ + S +K FE + SA + LIKS +L ++ +
Sbjct: 170 RIRFVSSE-------------IKKFEFPMTV-----SAA---NALIKSFGKLGMVEELLW 208
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFN 241
+ R ++ GI P + T N L++ + + +F + R++PD+ ++N
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM-------ESGRIKPDIVTYN 261
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
++ G+ + G+ + E +ME G + +Y ++ + L++EM K
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 321
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G+++ A++ +IGG K G++ + F+ M G + N + LI+GY K G V+ A
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
I + M+ + F+P+ T +++ GLC+ RV EAL+ D + Y LI
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLID 440
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
L + G+++EA +L +M+ KG D Y+A I+ + K
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 153/341 (44%), Gaps = 43/341 (12%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
+I++C + + + + +GI +L+I + K GY +F + +R
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM--IR 355
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
G +P+V + L+ G+ + G +E + + M G P++ +Y++++ C
Sbjct: 356 KGS-----KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN 410
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
G++ EA + R GL ++ Y+++I G K+G++++AE F+EM G +S +
Sbjct: 411 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS-TIGMLIEGLCEKKRVSEALEIIRNAM 404
LI+ + K VD AI ++K M +++ + T +L+ G+ ++ R EAL++ + M
Sbjct: 471 NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW-DMM 529
Query: 405 RDVSFCPSRKSY----------------------------------ELLIKRLCEDGQME 430
D P+ + E +I LC+ G+++
Sbjct: 530 IDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIK 589
Query: 431 EALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
EA KL + +G E +I I +K+G +A L+
Sbjct: 590 EACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 148/299 (49%), Gaps = 8/299 (2%)
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
+ L+ E K+D + I + + RG + N LIS C G E F
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS-------GCCGKKKLDEAFM 561
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
D K L+PD ++++ L+ G + ++E + W++ +R G +P++Y+Y++++ C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
+ E ++ ++EM K ++ + YN +I + +SG++ A E ++M+ G+ NS
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
T+ LI G + V+ A L++++M + P LI+G + ++ + +E +
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK-VECLLRE 740
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
M + P++ +Y ++I DG + EA +L +M KG PD Y FI GY K G
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 146/297 (49%), Gaps = 8/297 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
++F I + + K++ ++++ + G++P + T N +I + C G + E
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC-------GRYDE 313
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
F ++ + + P + +++ L+ G R + V EM + G PN+ YN L+
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
F G + +A ++ + M KGL L + YNT+I G+ K+GQ + AE KEM G
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N +F +I C DSA+ +ML ++ P + LI GLC+ + S+ALE+
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ + F ++ L+ LCE G+++EA ++Q ++ G+G D Y+ I G
Sbjct: 494 FQFL-NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 15/346 (4%)
Query: 130 LVSRCLFDCNNAPVKFF-EMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRS 188
L S +FD + ++F EMLL R + LI + K ++E+ +
Sbjct: 445 LCSHLMFD---SALRFVGEMLL---RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 189 RGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFY 248
+G RT N L+ + + + I +EI G +V S+N L+ G
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV-------SYNTLISGCC 551
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
+++ +EM + G P+ Y+Y+IL+ K+ EA + W++ + G+ DV
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
Y+ +I G K+ + E+ +EFF EM V+ N+V + HLI YC+ G + A+ + +DM
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
K P ++T LI+G+ RV EA +++ MR P+ Y LI + GQ
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEA-KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
M + L +M K P+ Y I GY + GN A+ L+ EM
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 7/238 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ + +LI + K++ +I+ + G+ P + T +++I K + + G F E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ SK ++P+ +N L+ + R G + M E+ +M+ G PN +Y L+
Sbjct: 636 MM------SK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
++ EA+ L+EEMR++GL +V Y +I G+ K GQ+ K E +EM V
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
N +T+ +I GY + G+V A + +M +K P++ T I G ++ V EA +
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 2/221 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P + N L+ R E + E ++ + + G P++Y + + FC GK+ EA KL
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ +M G+ +V +NT+I G G+ ++A F ++M G+E +T+ L+ G +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
+ A V K+M +K F P LI+ E +++A+E I++ M +
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE-IKDLMVSKGLSLTSS 401
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
+Y LIK C++GQ + A +L +M GF + + + I
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 132/308 (42%), Gaps = 16/308 (5%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
R + + +L+K K+I + +++ + +G P + N LI +
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA----- 378
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
G + ++D L ++N L+ G+ ++G+ + E + EM G N
Sbjct: 379 --GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
S+ ++ L C A + EM ++ + T+I G K G+ KA E + +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
G ++ T L++G C+ G +D A + K++L + + + LI G C KK++
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 394 SEAL----EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
EA E+++ ++ P +Y +LI L ++EEA++ G PD+
Sbjct: 557 DEAFMFLDEMVKRGLK-----PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 450 IYDAFIEG 457
Y I+G
Sbjct: 612 TYSVMIDG 619
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDS 360
KG+ T N ++ ++ + +K E F ++ GV + F IN +CK G V+
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 361 AILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLI 420
A+ ++ M + P T +I+GL R EA + + M + P+ +Y +L+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILV 337
Query: 421 KRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
K L ++ +A + +M KGF P++ +Y+ I+ + + G+
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 156/335 (46%), Gaps = 11/335 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
K +E L + +Q + P ++ LI +C I+ ++ ++ +R G +L+I
Sbjct: 182 KLYEAFLLSQKQTLT-PLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQ 240
Query: 204 CVAKCK--GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWN 261
+ + S +++EI + +L DV ND++MGF + G+ ++
Sbjct: 241 SLTRSNKIDSVMLLRLYKEI-------ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLG 293
Query: 262 EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
+ G + +++ G+ EAE L+EE+R G++ AYN ++ G+ K+G
Sbjct: 294 MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTG 353
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIG 381
++ AE EME GV + T+ LI+ Y G +SA +V K+M D +P +
Sbjct: 354 PLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFS 413
Query: 382 MLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAG 441
L+ G ++ + ++++ M+ + P R+ Y ++I + ++ A+ +M
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKE-MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 472
Query: 442 KGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+G EPD ++ I+ + K G +A + M R
Sbjct: 473 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 148/304 (48%), Gaps = 10/304 (3%)
Query: 148 MLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
++LK D P FVF L+ + + + ++++ ++S G+ P + N++I
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
K +C + + L +G + PD ++N L+ + G + EE++ MER
Sbjct: 455 GKF--NCLDHAMTTFDRMLSEG-----IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
GC+P +YNI++ + + + + ++L +M+ +G+ +V + T++ + KSG+
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
A E +EM+ G++ +S + LIN Y + G + A+ ++ M +P + LI
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
E +R +EA +++ M++ P +Y L+K L + ++ + +M G +
Sbjct: 628 AFGEDRRDAEAFAVLQ-YMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 446 PDLK 449
PD K
Sbjct: 687 PDRK 690
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 133/290 (45%), Gaps = 8/290 (2%)
Query: 186 LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
LR GI P+ R N L+ K G ++ + K + PD H+++ L+
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKT-------GPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 246 GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
+ G E V EME PN + ++ L+A F G+ ++ ++ +EM+ G++
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
D YN +I F K ++ A F M G+E + VT+ LI+ +CK G A ++
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
+ M ++ P A+T ++I +++R + ++ M+ P+ ++ L+ +
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL-GKMKSQGILPNVVTHTTLVDVYGK 561
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
G+ +A++ +M G +P +Y+A I Y + G + A M+
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 10/330 (3%)
Query: 147 EMLLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
E L + RQ P ++ L+K ++ + + +V + RG+SP T +LLI
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
+ + +E + GD ++P+ F+ L+ GF GE + +V EM+
Sbjct: 384 YVNAGRWESARIVLKE---MEAGD----VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G P+ YN+++ F + A ++ M +G+ D +NT+I K G+
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
AEE F+ ME G + T+ +IN Y D + M + P T L+
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+ + R ++A+E + M+ V PS Y LI + G E+A+ M G
Sbjct: 557 DVYGKSGRFNDAIECLEE-MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+P L ++ I + + D A ++ M
Sbjct: 616 KPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 56/267 (20%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
++++I + + +D ++ + S GI P T N LI C CK + + E+F
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC--HCKH--GRHIVAEEMF 502
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF-------GCVPNLYSY 275
+ + P ++N +M+ Y D +E W++M+R G +PN+ ++
Sbjct: 503 ---EAMERRGCLPCATTYN-IMINSYGD------QERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK---- 331
L+ ++ G+ +A + EEM+ GL+ T YN +I + + G E+A F+
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 332 -------------------------------EMELGGVESNSVTFEHLINGYCKVGDVDS 360
M+ GV+ + VT+ L+ +V
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 361 AILVYKDMLQKDFRPEASTIGMLIEGL 387
+VY++M+ +P+ ML L
Sbjct: 673 VPVVYEEMIMSGCKPDRKARSMLRSAL 699
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 152/296 (51%), Gaps = 8/296 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGIS-PQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+F++L+K + I+ + +V ++ GIS P T + L+ C+ S +F +
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ SK + PD +FN ++ GF R GE+E +++ + M++ GC PN+Y+Y+ LM
Sbjct: 258 MI------SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
FC GK++EA++ ++E++ GL+LD Y T++ F ++G+ ++A + EM+ +
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+++T+ ++ G G + A+ + + + +++ LC + +A++ +
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
+ M + P ++ L+ RLCE G E +++ G P K + A +E
Sbjct: 432 -SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVE 486
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 131/279 (46%), Gaps = 11/279 (3%)
Query: 124 SIIKSALVSRCLFDCNNA--PVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIE 181
SI S L+ CLF + + V+ FE ++ + P F+++I +++ + +
Sbjct: 232 SITYSTLMD-CLFAHSRSKEAVELFEDMI-SKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFN 241
I+ ++ G +P + + L++ G C G +E D K L+ D +
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMN------GFCK-VGKIQEAKQTFDEVKKTGLKLDTVGYT 342
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
LM F R+GE + ++ EM+ C + +YN+++ EG+ EA ++ ++ +
Sbjct: 343 TLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE 402
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G+ L+ +Y I+ +G++EKA +F M G+ + T+ L+ C+ G +
Sbjct: 403 GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIG 462
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ V L+ P + G ++E +C+++++ E++
Sbjct: 463 VRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 4/243 (1%)
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVW-NEMERFGCVPNLYSYNILMALFCGEGKMRE 290
R++P +++ + + GE+ + ++ G PN +NIL+ C G +
Sbjct: 155 RVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINF 214
Query: 291 AEKLWEEMRVKGLRL-DVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNSVTFEHL 348
A + EEM+ G+ + Y+T++ + + ++A E F++M G+ + VTF +
Sbjct: 215 AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVM 274
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS 408
ING+C+ G+V+ A + M + P L+ G C+ ++ EA + + ++
Sbjct: 275 INGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTF-DEVKKTG 333
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAA 468
Y L+ C +G+ +EA+KL +M D Y+ + G G + A
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 469 TLI 471
++
Sbjct: 394 QML 396
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR-PEASTIGMLIEGLCEKKRVSE 395
G++ N+ F L+ +CK GD++ A LV ++M + P + T L++ L R E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
A+E+ + + P ++ ++I C G++E A K+ M G P++ Y A +
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 456 EGYKKLGNDQMAATLIMEMSRT 477
G+ K+G Q A E+ +T
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKT 332
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 156/315 (49%), Gaps = 8/315 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ LL++ ++ K+ + ++ +R RGI + LIS C+ G +
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW--NCRK-----GNMKRA 348
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
F L D ++ L P +++ L+ G + GEM E + NEM+ G +N L+
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
+C +G + EA +++ M KG + DV NTI F + + ++A+++ M GGV+ +
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+V++ +LI+ YCK G+V+ A ++ +M K +P A T ++I C++ ++ EA + +R
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK-LR 527
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
M P +Y LI C ++EA++L ++M KG + + Y I G K
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 462 GNDQMAATLIMEMSR 476
G A L EM R
Sbjct: 588 GKSDEAFGLYDEMKR 602
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 163/363 (44%), Gaps = 58/363 (15%)
Query: 162 VFDLLIKSCLEL---------------KKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
VFD ++K L + ++ID +EI R + G+ + + +++ +
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
+ +G + F ++ ++P+ +++N ++ + + + +E V M++
Sbjct: 236 R-RGEVEKSKKLIKEFSVKG------IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G V N +Y +LM L GKM +AEKL++EMR +G+ DV Y ++I + G +++A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
F E+ G+ +S T+ LI+G CKVG++ +A ++ +M K LI+G
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 387 LCEKKRVSEALEIIRNAMR------DVSFCP----------------------------- 411
C K V EA +I + M DV C
Sbjct: 409 YCRKGMVDEA-SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
S SY LI C++G +EEA +L +M+ KG +P+ Y+ I Y K G + A L
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 472 MEM 474
M
Sbjct: 528 ANM 530
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKG-SCAGYGIFRE 220
VF+ LI +D + I ++ +G + TCN + SC + K A +FR
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ G ++ S+ +L+ + ++G +E + ++ EM G PN +YN+++
Sbjct: 461 MEG--------GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY 512
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
+C +GK++EA KL M G+ D Y ++I G + +++A F EM L G++
Sbjct: 513 AYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQ 572
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
NSVT+ +I+G K G D A +Y +M +K + + LI
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 177 DGSIEIVRML----RSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVR 232
+G++E + L S+G+ P T N++I A CK G +E LR
Sbjct: 482 EGNVEEAKRLFVEMSSKGVQPNAITYNVMI--YAYCK-----QGKIKEARKLRANMEANG 534
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
+ PD +++ L+ G ++ +++EM G N +Y ++++ GK EA
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFY 318
L++EM+ KG +D Y +IG +
Sbjct: 595 GLYDEMKRKGYTIDNKVYTALIGSMH 620
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 164/387 (42%), Gaps = 67/387 (17%)
Query: 142 PVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLL 201
V+ F +++ R+ D + +LI K+ ++EI + G+SP + C L
Sbjct: 133 AVQTFFCMVQRGREPDVVSYT--ILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 202 ISCV-------------------AKCKGSCAGY----------GIFREIFGLRDGDSKVR 232
+ + A+ K S Y G + L+ SK+
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN---------------- 276
PD+ ++N L+ +Y + ++ E V EM R G + YSYN
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCY 310
Query: 277 -------------------ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF 317
L+ FC R+A +L+EEMR KG+ ++V Y ++I F
Sbjct: 311 NFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 318 YKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
+ G A++ +M G+ + + + +++ CK G+VD A V+ DM++ + P+A
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 378 STIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQA 437
+ LI GLC RV+EA+++ + M+ CP +++ +I L ++ A K+
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFED-MKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWD 489
Query: 438 KMAGKGFEPDLKIYDAFIEGYKKLGND 464
+M KGF D + D I+ + D
Sbjct: 490 QMMDKGFTLDRDVSDTLIKASCSMSAD 516
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 144/317 (45%), Gaps = 9/317 (2%)
Query: 160 PFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFR 219
PF + I ++KK D ++ + + G P I N+ + + C+ + G+ +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLL--CRENKVGFAVQT 136
Query: 220 EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILM 279
++ G PDV S+ L+ G +R G++ E+WN M R G P+ + L+
Sbjct: 137 FFCMVQRGR-----EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 280 ALFCGEGKMREA-EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
C K+ A E + EE++ ++L YN +I GF K+G+IEKAE M G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
E + VT+ L+N Y + A V +M++ + +A + L++ C +
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+ M FC SY LI+ C +A +L +M KG ++ Y + I+ +
Sbjct: 312 FMVKEMEPRGFCDV-VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 459 KKLGNDQMAATLIMEMS 475
+ GN +A L+ +M+
Sbjct: 371 LREGNSSVAKKLLDQMT 387
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%)
Query: 240 FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMR 299
+N + R+ E+ E ++ +M+ G ++Y+ ++ C K + L +M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 300 VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVD 359
G D+ A+N + + ++ A + F M G E + V++ LING + G V
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
A+ ++ M++ P+ L+ GLC ++V A E++ ++ S Y L
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
I C+ G++E+A L++ M+ G EPDL Y+ + Y + A ++ EM R+
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 208/487 (42%), Gaps = 80/487 (16%)
Query: 28 TPPSDQSHIVS------TVVSLLIHHRSKSRWT-NLRSLLYSTKTLTPIHFSQIALQLKS 80
+ P +Q VS TV +++ R + RW L S S P+ F ++ L+ ++
Sbjct: 36 SKPDEQKSAVSYTEMAKTVSTIM---RERQRWQQTLVSDFPSFDFADPLFFGEL-LKSQN 91
Query: 81 NPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNN 140
N +L FF + N +D ++IL A L +A+ KS L +
Sbjct: 92 NVLFSLWFFRWLCSN-----YDYTPGPVSLNILFGALLDGKAVKAAKSFL--------DT 138
Query: 141 APVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCN- 199
K LL+ Y +C S E ++ +IE+ +L+ GIS + TCN
Sbjct: 139 TGFKPEPTLLEQYVKCLS-------------EEGLVEEAIEVYNVLKDMGISSSVVTCNS 185
Query: 200 LLISCV------------------------------AKCKGS--CAGYGIFREIFGLRDG 227
+L+ C+ A C G GY + ++ GL+ G
Sbjct: 186 VLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQ--GLKQG 243
Query: 228 DSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGK 287
L P + + L+ GF G + EV + M + P++Y Y ++ C K
Sbjct: 244 -----LDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKK 298
Query: 288 MREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
EA +++ ++ KG D Y T+I GF + G + A + + EM G+ N +
Sbjct: 299 QLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNV 358
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV 407
+I+G+ K G++ Y +ML+ + + +I+G C + EA EI +N M +
Sbjct: 359 MIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN-MSET 417
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
P+ +Y LIK C++ ++E+ LKL ++ G +P Y A + K +D +A
Sbjct: 418 GVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKM--SDSVA 475
Query: 468 ATLIMEM 474
+L +E+
Sbjct: 476 TSLNLEI 482
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 5/229 (2%)
Query: 250 DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE-EMRVKGLRLDVT 308
+G +E EV+N ++ G ++ + N ++ G K R+ ++ WE + D
Sbjct: 158 EGLVEEAIEVYNVLKDMGISSSVVTCN---SVLLGCLKARKLDRFWELHKEMVESEFDSE 214
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
+I G + + E K+ G++ + LI+G+C++G+ V M
Sbjct: 215 RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM 274
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
+ + P +I+GLC K+ EA I +N ++D + P R Y +I+ CE G
Sbjct: 275 IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKN-LKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
+ A KL +M KG P+ Y+ I G+ K G + EM R
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 13/293 (4%)
Query: 184 RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDL 243
+M+R +G P +R CN+++ + + ++ + + G + P V +FN +
Sbjct: 193 KMIR-KGFLPSVRNCNIVLKVLRDSRMMNKASAVYETM--IEHG-----IMPTVITFNTM 244
Query: 244 MMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGL 303
+ ++ G++E ++++W EM+R + +YNIL+ F GKM EA + +MR G
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 304
Query: 304 RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAIL 363
+ ++N +I G+ K G + A EM G+ + T+ I C G +D A
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA-- 362
Query: 364 VYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRL 423
+++L P+ + L+ G + + EA ++ + +R PS +Y LI L
Sbjct: 363 --RELLSSMAAPDVVSYNTLMHGYIKMGKFVEA-SLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 424 CEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
CE G +E A +L+ +M + PD+ Y ++G+ K GN MA + EM R
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 21/323 (6%)
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
P+ F+ LI+ + D + + + + GI P T N+ I +
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD----------- 355
Query: 219 REIFGLRDGDSKVRLR----PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYS 274
FG R D++ L PDV S+N LM G+ + G+ +++++ P++ +
Sbjct: 356 ---FG-RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
YN L+ C G + A++L EEM + + DV Y T++ GF K+G + A E + EM
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR-PEASTIGMLIEGLCEKKRV 393
G++ + + G ++GD D A ++++M+ D P+ + + I+GLC+ +
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
+A+E R R V P +Y +I+ E+GQ + A L +M K P + Y
Sbjct: 532 VKAIEFQRKIFR-VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 590
Query: 454 FIEGYKKLGNDQMAATLIMEMSR 476
I G+ K G + A EM +
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKK 613
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 141/301 (46%), Gaps = 11/301 (3%)
Query: 158 SAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
+AP V ++ L+ +++ K + + LR+ I P I T N LI G C
Sbjct: 370 AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID------GLCES- 422
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G L++ + + PDV ++ L+ GF ++G + M EV++EM R G P+ Y+Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRL-DVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
G +A +L EEM D+T YN I G K G + KA EF +++
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G+ + VT+ +I GY + G A +Y +ML+K P T +LI G + R+
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAF 454
+A + M+ P+ ++ L+ +C+ G ++EA + KM +G P+ Y
Sbjct: 603 QAFQY-STEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 455 I 455
I
Sbjct: 662 I 662
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 109/203 (53%), Gaps = 5/203 (2%)
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
+ +M R G +P++ + NI++ + M +A ++E M G+ V +NT++ +K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+G +E+ ++ + EM+ +E + VT+ LING+ K G ++ A + DM + F +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
LIEG C++ +A + + M + P+ +Y + I LC+ G++++A +L + M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVT-DEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 440 AGKGFEPDLKIYDAFIEGYKKLG 462
A PD+ Y+ + GY K+G
Sbjct: 370 AA----PDVVSYNTLMHGYIKMG 388
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 8/209 (3%)
Query: 192 SPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
+P + N+ I + K R+IF +V L PD ++ ++ G+ +G
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIF-------RVGLVPDHVTYTTVIRGYLENG 564
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
+ +M +++EM R P++ +Y +L+ G++ +A + EM+ +G+R +V +N
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
++ G K+G I++A + +ME G+ N ++ LI+ C + + +YK+ML K
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 372 DFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ P+ T L + L EK S +E +
Sbjct: 685 EIEPDGYTHRALFKHL-EKDHESREVEFL 712
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 11/294 (3%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ D+L+ L+K + E+ + R G+ P R+ NLL+ Y +F ++
Sbjct: 160 ILDVLVSHRGYLQK---AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
RD + PDV S+ L+ GF R G++ E+ ++M G VP+ SY L+
Sbjct: 217 LE-RD------VVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNS 269
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C + ++REA KL M++KG D+ YNT+I GF + + A + +M G N
Sbjct: 270 LCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPN 329
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
SV++ LI G C G D ++M+ K F P S L++G C +V EA +++
Sbjct: 330 SVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE 389
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
M++ S ++E++I +C + + E+ + D +I D I
Sbjct: 390 VVMKNGETLHS-DTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGI 442
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 251 GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
G ++ E++ G +PN SYN+LM FC + A +L+ +M + + DV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
+I GF + GQ+ A E +M G + +++ L+N C+ + A + M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME 430
K P+ +I G C + R +A +++ + + + P+ SY LI LC+ G +
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN-GCSPNSVSYRTLIGGLCDQGMFD 347
Query: 431 EALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
E K +M KGF P + + ++G+ G + A ++
Sbjct: 348 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 388
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
R + S N ++ G D ++E+ + + + G PN+ ++ L+ FC G+M A
Sbjct: 248 FRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
L++ M +G+ D+ AY+T+I G++K+G + + F + GV+ + V F I+ Y
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL----EIIRNAMRDVS 408
K GD+ +A +VYK ML + P T +LI+GLC+ R+ EA +I++ M
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME--- 423
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
PS +Y LI C+ G + L M G+ PD+ IY ++G K G
Sbjct: 424 --PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 119/227 (52%), Gaps = 1/227 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+V +F L+ GF + GEM+ +++ ME+ G P+L +Y+ L+ + G + KL
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ + KG++LDV +++ I + KSG + A +K M G+ N VT+ LI G C+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
G + A +Y +L++ P T LI+G C+ + + + ++ + + P
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVV 462
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
Y +L+ L + G M A++ KM G+ ++ ++++ I+G+ +L
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 149 LLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
LL C AP V F LI + ++D + ++ +++ RGI P + + LI
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
K G+ +F + L G ++ DV F+ + + + G++ V+ M
Sbjct: 333 KAGMLGMGHKLFSQ--ALHKG-----VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G PN+ +Y IL+ C +G++ EA ++ ++ +G+ + Y+++I GF K G +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
+++M G + V + L++G K G + A+ ML + R LI+G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
C R EAL++ R M P ++ +++ +G++EEAL L +M G EP
Sbjct: 506 WCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 447 DLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
D Y I+ + K + L M R +
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 152/317 (47%), Gaps = 10/317 (3%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC-VAKCKGSCAGYGIFRE 220
VF+ LI L + D ++++ R++ GI P + T ++ + + + A + FR
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
K+ L PD ++ L+ F + + + ++++ M+R ++ N+++
Sbjct: 558 F--------KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
L ++ +A K + + + D+ YNT+I G+ ++++AE F+ +++
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N+VT LI+ CK D+D AI ++ M +K +P A T G L++ + + + ++
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
M++ PS SY ++I LC+ G+++EA + + PD+ Y I GY K
Sbjct: 730 EE-MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 461 LGNDQMAATLIMEMSRT 477
+G AA L M R
Sbjct: 789 VGRLVEAALLYEHMLRN 805
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 153/340 (45%), Gaps = 29/340 (8%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE-- 220
+ +LIK + +I + + + RG+ P I T + LI KC +G+ ++ +
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 221 ---------IFG-LRDGDSKVRL----------------RPDVHSFNDLMMGFYRDGEME 254
I+G L DG SK L R +V FN L+ G+ R +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 255 MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
+V+ M +G P++ ++ +M + EG++ EA L+ M GL D AY T+I
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
F K + + F M+ + ++ +I+ K ++ A + ++++
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 375 PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALK 434
P+ T +I G C +R+ EA E I ++ F P+ + +LI LC++ M+ A++
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEA-ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 435 LQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ + MA KG +P+ Y ++ + K + + + L EM
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 140/289 (48%), Gaps = 19/289 (6%)
Query: 178 GSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDV 237
S+ RML +GISP + T +LI KG C I+ E FG+ K + P +
Sbjct: 375 ASVVYKRML-CQGISPNVVTYTILI------KGLCQDGRIY-EAFGMYGQILKRGMEPSI 426
Query: 238 HSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
+++ L+ GF + G + ++ +M + G P++ Y +L+ +G M A + +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
M + +RL+V +N++I G+ + + ++A + F+ M + G++ + TF ++ G
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII----RNAMR-DVSFCPS 412
++ A+ ++ M + P+A LI+ C+ + + L++ RN + D++ C
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC-- 604
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
++I L + ++E+A K + EPD+ Y+ I GY L
Sbjct: 605 ----NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 43/242 (17%)
Query: 170 CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDS 229
C +K G +++ +++ IS I CN++I + KC F +
Sbjct: 577 CKHMKPTIG-LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI------- 628
Query: 230 KVRLRPDVHSFNDLMMGFY-----------------------------------RDGEME 254
+ ++ PD+ ++N ++ G+ ++ +M+
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 255 MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
+++ M G PN +Y LM F + + KL+EEM+ KG+ + +Y+ II
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
G K G++++A F + + + V + LI GYCKVG + A L+Y+ ML+ +
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 375 PE 376
P+
Sbjct: 809 PD 810
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 117 RLKVQALSIIKSALVSRCLFDCNNA--PVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELK 174
R K+ A I +V LF C+ KFF L++ + D ++ +I L+
Sbjct: 594 RNKISA-DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV--TYNTMICGYCSLR 650
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL- 233
++D + I +L+ P T +LI + CK + D D +R+
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVL--CKNN--------------DMDGAIRMF 694
Query: 234 --------RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
+P+ ++ LM F + ++E +++ EM+ G P++ SY+I++ C
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
G++ EA ++ + L DV AY +I G+ K G++ +A ++ M GV+ + +
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 158/339 (46%), Gaps = 37/339 (10%)
Query: 143 VKFFEMLLK-----TYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRT 197
+ FF+ +++ T C+ VF + + + D +I + R + R I I +
Sbjct: 91 IDFFDYMVRSRPFYTAVDCNKVIGVF-------VRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 198 CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEME--- 254
N+LI C C F ++ +K+ +PDV +FN L+ G + +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKL-------TKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 255 -----MIEE-------VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
M+E ++++M G P + ++N L+ C EG++ EA L +M KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI 362
L +DV Y TI+ G K G + A +ME ++ + V + +I+ CK G A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 363 LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM-RDVSFCPSRKSYELLIK 421
++ +ML+K P T +I+G C R S+A ++R+ + R+++ P ++ LI
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN--PDVLTFNALIS 374
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
++G++ EA KL +M + PD Y++ I G+ K
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 148/273 (54%), Gaps = 18/273 (6%)
Query: 189 RGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFY 248
+GI+P + T N +I G C+ +G + + L + + PDV +FN L+
Sbjct: 325 KGIAPNVFTYNCMID------GFCS-FGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
++G++ E++ +EM P+ +YN ++ FC + +A+ +++ M DV
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVV 433
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
+NTII + ++ ++++ + +E+ G+ +N+ T+ LI+G+C+V ++++A ++++M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALE---IIRNAMRDVSFCPSRKSYELLIKRLCE 425
+ P+ T +L+ G CE +++ EALE +I+ + D+ +Y ++I +C+
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD----TVAYNIIIHGMCK 549
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+++EA L + G EPD++ Y+ I G+
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 184/391 (47%), Gaps = 49/391 (12%)
Query: 100 LH-DLYSYSTIVHILSRARLKVQALS--------------IIKSALVSRCLFDCNNAPVK 144
LH D+ +Y TIV+ + + AL+ +I SA++ R D +++ +
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 145 --FFEMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNL 200
F EML K AP F ++ +I + + ++R + R I+P + T N
Sbjct: 317 YLFSEMLEKGI-----APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 201 LISCVAK------CKGSCAGY---GIFRE-------IFGL----RDGDSK----VRLRPD 236
LIS K + C IF + I+G R D+K + PD
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
V +FN ++ + R ++ ++ E+ R G V N +YN L+ FC + A+ L++
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
EM G+ D N ++ GF ++ ++E+A E F+ +++ ++ ++V + +I+G CK
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
VD A ++ + P+ T ++I G C K +S+A ++ + M+D P +Y
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA-NVLFHKMKDNGHEPDNSTY 610
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
LI+ + G+++++++L ++M GF D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 123/243 (50%), Gaps = 11/243 (4%)
Query: 192 SPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
SP + T N +I + K G + REI S+ L + ++N L+ GF
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREI-------SRRGLVANTTTYNTLIHGFCEVD 481
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
+ ++++ EM G P+ + NIL+ FC K+ EA +L+E +++ + LD AYN
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
II G K ++++A + F + + GVE + T+ +I+G+C + A +++ M
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 372 DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL-LIKRLCEDGQME 430
P+ ST LI G + + +++E+I + MR F S ++ + ++ L DG+++
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELI-SEMRSNGF--SGDAFTIKMVADLITDGRLD 658
Query: 431 EAL 433
++
Sbjct: 659 KSF 661
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 150/334 (44%), Gaps = 47/334 (14%)
Query: 162 VFDLLIKS-CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F+ LI CLE + ++ + + +M+ +G+ + T +++ + K + + + +
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMV-GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ + ++PDV ++ ++ +DG + +++EM G PN+++YN ++
Sbjct: 287 M-------EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
FC G+ +A++L +M + + DV +N +I K G++ +AE+ EM +
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
++VT+ +I G+CK D A K M P+ T +I+ C KRV E ++++
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 401 R---------------------------NAMRDV-------SFCPSRKSYELLIKRLCED 426
R NA +D+ CP + +L+ CE+
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 427 GQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
++EEAL+L + + D Y+ I G K
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 18/264 (6%)
Query: 228 DSKVRLRPDVHSF--NDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
D VR RP + N ++ F R ++ ++ +ME N+YS+NIL+ FC
Sbjct: 95 DYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDC 154
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNS-- 342
K+ + + ++ G + DV +NT++ G +I +A F M E G +E+ +
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 343 ------------VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
+TF LING C G V A + M+ K + T G ++ G+C+
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
AL ++ + M + P Y +I RLC+DG +A L ++M KG P++
Sbjct: 275 GDTKSALNLL-SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 451 YDAFIEGYKKLGNDQMAATLIMEM 474
Y+ I+G+ G A L+ +M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDM 357
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
N +IG F + + + A +++ME+ + N +F LI +C + ++ + + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEI--------------IRNAMRDVSFCPSRKSY 416
F+P+ T L+ GLC + R+SEAL + + + M ++ P ++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
LI LC +G++ EA L KM GKG D+ Y + G K+G+ + A L+ +M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 477 TQ 478
T
Sbjct: 290 TH 291
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 152/301 (50%), Gaps = 14/301 (4%)
Query: 165 LLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGL 224
+LI + + + + ++E+++ ++ RGISP + T + LI+ G C + L
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLIT------GLCKSGRLADAERRL 106
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
+ DSK ++ P+V +F+ L+ + + G++ ++ V+ M + PN+++Y+ L+ C
Sbjct: 107 HEMDSK-KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCM 165
Query: 285 EGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
++ EA K+ + M KG +V Y+T+ GF+KS +++ + +M GV +N+V+
Sbjct: 166 HNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 225
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL---EIIR 401
LI GY + G +D A+ V+ M P + +++ GL V +AL E ++
Sbjct: 226 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 285
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
D+ +Y ++I +C+ ++EA L K+ K EPD K Y I +
Sbjct: 286 KTRNDLDII----TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRA 341
Query: 462 G 462
G
Sbjct: 342 G 342
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 1/238 (0%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K+ + PD+ + + L+ GF ++ V +ME+ G ++ IL+ C +
Sbjct: 6 KLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVV 65
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
A ++ + M+ +G+ +V Y+++I G KSG++ AE EM+ + N +TF LI
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+ Y K G + VYK M+Q P T LI GLC RV EA++++ + M
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML-DLMISKGC 184
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
P+ +Y L + ++++ +KL M +G + + I+GY + G +A
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 262 EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
+M + G P++ + + L+ FC +++A + +M G++ DV +I K+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIG 381
+ A E K M+ G+ N VT+ LI G CK G + A +M K P T
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 382 MLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAG 441
LI+ ++ ++S+ ++ + M +S P+ +Y LI LC +++EA+K+ M
Sbjct: 123 ALIDAYAKRGKLSK-VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 442 KGFEPDLKIYDAFIEGYKK 460
KG P++ Y G+ K
Sbjct: 182 KGCTPNVVTYSTLANGFFK 200
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 157 DSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG 216
D F + LI ++D +I+++ ++ S+G +P + T + L + K G
Sbjct: 150 DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDG-- 207
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
L D + + + S N L+ G+++ G++++ V+ M G +PN+ SYN
Sbjct: 208 -----IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYN 262
Query: 277 ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
I++A G++ +A +E M+ LD+ Y +I G K+ +++A + F +++
Sbjct: 263 IVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK 322
Query: 337 GVESNSVTFEHLINGYCKVG 356
VE + + +I + G
Sbjct: 323 RVEPDFKAYTIMIAELNRAG 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 134 CLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
C+ + + +K ++++ + C + L + ++D I+++ + RG++
Sbjct: 164 CMHNRVDEAIKMLDLMIS--KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA 221
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
+CN LI + G+F + +G L P++ S+N ++ G + +GE+
Sbjct: 222 NTVSCNTLIKGYFQAGKIDLALGVFG--YMTSNG-----LIPNIRSYNIVLAGLFANGEV 274
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
E + M++ ++ +Y I++ C ++EA L+ +++ K + D AY +
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 314 IGGFYKSGQIEKAEEF 329
I ++G +A+
Sbjct: 335 IAELNRAGMRTEADAL 350
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 147/314 (46%), Gaps = 12/314 (3%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
F ++++ +K+D +I ++ + P + N L+S + K K +F
Sbjct: 134 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFE-- 191
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+RD R PD +++ L+ G+ ++ + EV+ EM GC P++ +Y+I++ +
Sbjct: 192 -NMRD-----RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDI 245
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C G++ EA + M + Y+ ++ + ++E+A + F EME G++++
Sbjct: 246 LCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 305
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
F LI +CK + + V K+M K P + + +++ L E+ EA ++ R
Sbjct: 306 VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR 365
Query: 402 NAMRDVSFC-PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
++ C P +Y ++IK CE +ME A K+ M KG P + + I G +
Sbjct: 366 KMIK---VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCE 422
Query: 461 LGNDQMAATLIMEM 474
Q A L+ EM
Sbjct: 423 ERTTQKACVLLEEM 436
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
+V +F +M + R +++ +N ME++ PNL ++N L++ C +R+A++++
Sbjct: 131 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 190
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
E MR + D Y+ ++ G+ K + KA E F+EM G + VT+ +++ CK
Sbjct: 191 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 249
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA----LEIIRNAMR-DVSFC 410
G VD A+ + + M +P +L+ + R+ EA LE+ R+ M+ DV+
Sbjct: 250 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV- 308
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
+ LI C+ +M+ ++ +M KG P+ K
Sbjct: 309 -----FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
++ DV FN L+ F + M+ + V EM+ G PN S NI++ G+ EA
Sbjct: 302 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 361
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
++ +M +K D Y +I F + ++E A++ +K M GV + TF LING
Sbjct: 362 DVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 420
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
C+ A ++ ++M++ RP T G L + L +++R
Sbjct: 421 CEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 460
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 286 GKMREAEKLWE---EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
K+R+ + +W+ MR K + L+V + ++ + ++ ++++A F ME + N
Sbjct: 109 AKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNL 167
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
V F L++ CK +V A V+++M + F P++ T +L+EG ++ + +A E+ R
Sbjct: 168 VAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFRE 226
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
M D P +Y +++ LC+ G+++EAL + M +P IY + Y
Sbjct: 227 -MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTEN 285
Query: 463 NDQMAATLIMEMSRT 477
+ A +EM R+
Sbjct: 286 RLEEAVDTFLEMERS 300
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 30/250 (12%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDS 158
C D+ +YS +V IL +A +AL I++S S C
Sbjct: 232 CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPS----------------------ICKP 269
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
F++ +L+ + +++ +++ + G+ + N LI K Y +
Sbjct: 270 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 329
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
+E+ SK + P+ S N ++ GE + +V+ +M + C P+ +Y ++
Sbjct: 330 KEM------KSK-GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMV 381
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ +FC + +M A+K+W+ MR KG+ + ++ +I G + +KA +EM G+
Sbjct: 382 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 441
Query: 339 ESNSVTFEHL 348
+ VTF L
Sbjct: 442 RPSGVTFGRL 451
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 158/339 (46%), Gaps = 37/339 (10%)
Query: 143 VKFFEMLLK-----TYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRT 197
+ FF+ +++ T C+ VF + + + D +I + R + R I I +
Sbjct: 91 IDFFDYMVRSRPFYTAVDCNKVIGVF-------VRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 198 CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEME--- 254
N+LI C C F ++ +K+ +PDV +FN L+ G + +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKL-------TKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 255 -----MIEE-------VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
M+E ++++M G P + ++N L+ C EG++ EA L +M KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI 362
L +DV Y TI+ G K G + A +ME ++ + V + +I+ CK G A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 363 LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM-RDVSFCPSRKSYELLIK 421
++ +ML+K P T +I+G C R S+A ++R+ + R+++ P ++ LI
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN--PDVLTFNALIS 374
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
++G++ EA KL +M + PD Y++ I G+ K
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 148/273 (54%), Gaps = 18/273 (6%)
Query: 189 RGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFY 248
+GI+P + T N +I G C+ +G + + L + + PDV +FN L+
Sbjct: 325 KGIAPNVFTYNCMID------GFCS-FGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
++G++ E++ +EM P+ +YN ++ FC + +A+ +++ M DV
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVV 433
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
+NTII + ++ ++++ + +E+ G+ +N+ T+ LI+G+C+V ++++A ++++M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALE---IIRNAMRDVSFCPSRKSYELLIKRLCE 425
+ P+ T +L+ G CE +++ EALE +I+ + D+ +Y ++I +C+
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD----TVAYNIIIHGMCK 549
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+++EA L + G EPD++ Y+ I G+
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 181/391 (46%), Gaps = 49/391 (12%)
Query: 100 LH-DLYSYSTIVHILSRARLKVQALS--------------IIKSALVSRCLFDCNNAPVK 144
LH D+ +Y TIV+ + + AL+ +I SA++ R D +++ +
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 145 --FFEMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNL 200
F EML K AP F ++ +I + + ++R + R I+P + T N
Sbjct: 317 YLFSEMLEKGI-----APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 201 LISCVAKCKGSCAGYGIFRE----------------IFGL----RDGDSK----VRLRPD 236
LIS K + E I+G R D+K + PD
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
V +FN ++ + R ++ ++ E+ R G V N +YN L+ FC + A+ L++
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
EM G+ D N ++ GF ++ ++E+A E F+ +++ ++ ++V + +I+G CK
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
VD A ++ + P+ T ++I G C K +S+A ++ + M+D P +Y
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA-NVLFHKMKDNGHEPDNSTY 610
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
LI+ + G+++++++L ++M GF D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 11/246 (4%)
Query: 192 SPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
SP + T N +I + K G + REI S+ L + ++N L+ GF
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREI-------SRRGLVANTTTYNTLIHGFCEVD 481
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
+ ++++ EM G P+ + NIL+ FC K+ EA +L+E +++ + LD AYN
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
II G K ++++A + F + + GVE + T+ +I+G+C + A +++ M
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 372 DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR---KSYELLIKRLCEDGQ 428
P+ ST LI G + + +++E+I + MR F K E +I R+ ++
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELI-SEMRSNGFSGDAFTIKMAEEIICRVSDEEI 660
Query: 429 MEEALK 434
+E L+
Sbjct: 661 IENYLR 666
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 173/393 (44%), Gaps = 58/393 (14%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
D+ +++T++H L +AL++ + + L V F+ ++ + P
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-----EAVALFDQMV----EIGLTPV 225
Query: 162 V--FDLLIKS-CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
V F+ LI CLE + ++ + + +M+ +G+ + T +++ + K G
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMV-GKGLHIDVVTYGTIVNGMCK-------MGDT 277
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
+ L + ++PDV ++ ++ +DG + +++EM G PN+++YN +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ FC G+ +A++L +M + + DV +N +I K G++ +AE+ EM +
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
++VT+ +I G+CK D A K M P+ T +I+ C KRV E ++
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 399 IIR---------------------------NAMRDV-------SFCPSRKSYELLIKRLC 424
++R NA +D+ CP + +L+ C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
E+ ++EEAL+L + + D Y+ I G
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 18/264 (6%)
Query: 228 DSKVRLRPDVHSF--NDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
D VR RP + N ++ F R ++ ++ +ME N+YS+NIL+ FC
Sbjct: 95 DYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDC 154
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNS-- 342
K+ + + ++ G + DV +NT++ G +I +A F M E G +E+ +
Sbjct: 155 HKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF 214
Query: 343 ------------VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
+TF LING C G V A + M+ K + T G ++ G+C+
Sbjct: 215 DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKM 274
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
AL ++ + M + P Y +I RLC+DG +A L ++M KG P++
Sbjct: 275 GDTKSALNLL-SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 451 YDAFIEGYKKLGNDQMAATLIMEM 474
Y+ I+G+ G A L+ +M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDM 357
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
N +IG F + + + A +++ME+ + N +F LI +C + ++ + + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEI--------------IRNAMRDVSFCPSRKSY 416
F+P+ T L+ GLC + R+SEAL + + + M ++ P ++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
LI LC +G++ EA L KM GKG D+ Y + G K+G+ + A L+ +M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 477 TQ 478
T
Sbjct: 290 TH 291
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 34/275 (12%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+P+V +N ++ G+ + G+M+ + M + P++ ++NIL+ +C K A
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L+ EM+ KG +V ++NT+I GF SG+IE+ + EM G + T E L++G C
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR------------ 401
+ G VD A + D+L K P G L+E LC + + A+E++
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 402 ----------------------NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
M + P ++ LL++ LC +A +L+
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA 429
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ KG+EPD Y + G+ K G + L+ EM
Sbjct: 430 SSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEM 464
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 123/302 (40%), Gaps = 43/302 (14%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
V++ ++ ++ +D ++ + + P + T N+LI+ + +FRE+
Sbjct: 195 VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM 254
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC------------- 268
+ P+V SFN L+ GF G++E ++ EM GC
Sbjct: 255 -------KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDG 307
Query: 269 ----------------------VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLD 306
+P+ + Y L+ CGE K A ++ EE+ KG
Sbjct: 308 LCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPC 367
Query: 307 VTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYK 366
A T++ G KSG+ EKA F ++M G+ +SVTF L+ C A +
Sbjct: 368 FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRL 427
Query: 367 DMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCED 426
K + P+ +T +L+ G ++ R E E++ N M D P +Y L+ L
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEG-EVLVNEMLDKDMLPDIFTYNRLMDGLSCT 486
Query: 427 GQ 428
G+
Sbjct: 487 GK 488
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 31/380 (8%)
Query: 83 HLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAP 142
+L RFF + C H + Y ++V ILS+ R +I
Sbjct: 128 NLGYRFFVWAAKQPRYC-HSIEVYKSMVKILSKMRQFGAVWGLI---------------- 170
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
E + K Q P +F +L++ + +IE++ + G P L+
Sbjct: 171 ----EEMRKENPQL-IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLL 225
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
+ K +G ++ L + D ++R ++ F L+ G+ R G+M + V +
Sbjct: 226 DALCK-------HGSVKDAAKLFE-DMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQ 277
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M G P++ Y L++ + GKM +A L +MR +G + Y +I K +
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
+E+A + F EME E++ VT+ L++G+CK G +D +V DM++K P T
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
++ +K+ E LE++ MR + + P Y ++I+ C+ G+++EA++L +M
Sbjct: 398 IMVAHEKKESFEECLELMEK-MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 443 GFEPDLKIYDAFIEGYKKLG 462
G P + + I G G
Sbjct: 457 GLSPGVDTFVIMINGLASQG 476
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 157/352 (44%), Gaps = 12/352 (3%)
Query: 126 IKSALVSRCLFDCNNAP---VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEI 182
++ L+ R L C +A +FF K R C S V+ ++K ++++ +
Sbjct: 111 LRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIE-VYKSMVKILSKMRQFGAVWGL 169
Query: 183 VRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFND 242
+ +R +PQ+ L + V + A + ++ + D K PD + F
Sbjct: 170 IEEMRKE--NPQLIEPELFVVLVQRF----ASADMVKKAIEVLDEMPKFGFEPDEYVFGC 223
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
L+ + G ++ +++ +M R NL + L+ +C GKM EA+ + +M G
Sbjct: 224 LLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI 362
D+ Y ++ G+ +G++ A + ++M G E N+ + LI CKV ++ A+
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 363 LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKR 422
V+ +M + + + T L+ G C+ ++ + I+ + M PS +Y ++
Sbjct: 343 KVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY-IVLDDMIKKGLMPSELTYMHIMVA 401
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ EE L+L KM + PD+ IY+ I KLG + A L EM
Sbjct: 402 HEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 287 KMREAEKLW---EEMRVKGLRL-DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
KMR+ +W EEMR + +L + + ++ F + ++KA E EM G E +
Sbjct: 159 KMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDE 218
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
F L++ CK G V A +++DM + F L+ G C ++ EA ++
Sbjct: 219 YVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQ 277
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
M + F P Y L+ G+M +A L M +GFEP+ Y I+ K+
Sbjct: 278 -MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 463 NDQMAATLIMEMSRTQ 478
+ A + +EM R +
Sbjct: 337 RMEEAMKVFVEMERYE 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 122/306 (39%), Gaps = 71/306 (23%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAK------------------CKGSCAGY- 215
K+ + +++R +R RG P +LI + K C+ Y
Sbjct: 302 KMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYT 361
Query: 216 ---------GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
G + + + D K L P ++ +M+ + E E+ +M +
Sbjct: 362 ALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQI 421
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
P++ YN+++ L C G+++EA +LW EM GL V + +I G G + +A
Sbjct: 422 EYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEA 481
Query: 327 EEFFKEMELGGVESNSV--TFEHLIN---------------------GYCKVGDVDSAIL 363
+ FKEM G+ S S T + L+N G C++ + I
Sbjct: 482 SDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIW 541
Query: 364 VYK---------------DMLQKDFRPEASTIGMLIEGLCE---KKRVSEALEIIRN--A 403
++ +M++ DF P+ T L++GL + ++ E E +RN A
Sbjct: 542 IHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMAA 601
Query: 404 MRDVSF 409
R++SF
Sbjct: 602 EREMSF 607
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 152/335 (45%), Gaps = 15/335 (4%)
Query: 147 EMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
EML R C+ +L+++ +KI+ + IV ++S G+ P + T N L A
Sbjct: 454 EMLQPNDRTCN-------ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 506
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
+ +C ++ R +KV+ P+V + ++ G+ +G+ME + M+
Sbjct: 507 RIGSTCTA----EDMIIPRMLHNKVK--PNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G PNL+ +N L+ F M ++ + M G++ DV ++T++ + G +++
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
EE + +M GG++ + F L GY + G+ + A + M + RP +I G
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
C + +A+++ + V P+ +YE LI E Q +A +L M GK P
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Query: 447 DLKIYDAFIEGYKKLG--NDQMAATLIMEMSRTQK 479
K +G+K +G N A TL S + K
Sbjct: 741 TRKTMQLIADGWKSIGVSNSNDANTLGSSFSTSSK 775
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
DV S LM G G + ++N + G P+L +Y L+ + L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
++ GL+ D +N II +SG +++A + F++M+ G + + TF LI GY K+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 356 GDVDSAILVYKDMLQKD-FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR------DVS 408
G ++ + + ML+ + +P T +L++ C ++++ EA I+ V+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 409 FCPSRKSY----------ELLIKRL-------------------CEDGQMEEALKLQAKM 439
F K+Y +++I R+ CE+G+MEEAL+ +M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 440 AGKGFEPDLKIYDAFIEGY 458
G P+L ++++ I+G+
Sbjct: 558 KELGVHPNLFVFNSLIKGF 576
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 133/300 (44%), Gaps = 10/300 (3%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
L+ +E + + I L G P + T L++ + + K F + L
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKH-------FHSLLSLI 377
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
K L+PD FN ++ G ++ +++ +M+ GC P ++N L+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 286 GKMREAEKLWEEM-RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
GK+ E+ +L + M R + L+ + N ++ + +IE+A +M+ GV+ + VT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 345 FEHLINGYCKVGDVDSA-ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
F L Y ++G +A ++ ML +P T G ++ G CE+ ++ EAL
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR- 556
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
M+++ P+ + LIK M+ ++ M G +PD+ + + + +G+
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 100/202 (49%)
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
++ S LM G+ +EA ++ + +G + + Y T++ +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
++E G++ +++ F +IN + G++D A+ +++ M + +P AST LI+G +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
++ E+ ++ +RD P+ ++ +L++ C ++EEA + KM G +PD+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 451 YDAFIEGYKKLGNDQMAATLIM 472
++ + Y ++G+ A +I+
Sbjct: 498 FNTLAKAYARIGSTCTAEDMII 519
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV 407
L+NG + G A ++ ++++ +P T L+ L +K L +I ++
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN- 383
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
P + +I E G +++A+K+ KM G +P ++ I+GY K+G + +
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 468 ATLIMEMSRTQ 478
+ L+ M R +
Sbjct: 444 SRLLDMMLRDE 454
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 117/217 (53%), Gaps = 7/217 (3%)
Query: 186 LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
+ +GI P + T N +I + R + + ++ PD+ +F+ L+
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI-------EKQINPDIVTFSALIN 88
Query: 246 GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
F ++ ++ EE++ EM R+ P +YN ++ FC + ++ +A+++ + M KG
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
DV ++T+I G+ K+ +++ E F EM G+ +N+VT+ LI+G+C+VGD+D+A +
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
+M+ P+ T ++ GLC KK + +A I+ +
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
+DG + ++ EM G PN+ +YN ++ FC G+ +A++L M K + D+
Sbjct: 22 KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIV 81
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
++ +I F K ++ +AEE +KEM + ++T+ +I+G+CK VD A + M
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 141
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
K P+ T LI G C+ KRV +EI R + +Y LI C+ G
Sbjct: 142 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR-GIVANTVTYTTLIHGFCQVGD 200
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
++ A L +M G PD + + G
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAG 229
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C +G A+ L+ EM KG+ +V YN +I F SG+ A++ + M + +
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
VTF LIN + K V A +YK+ML+ P T +I+G C++ RV +A ++
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML- 138
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
++M P ++ LI C+ +++ +++ +M +G + Y I G+ ++
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 462 GNDQMAATLIMEM 474
G+ A L+ EM
Sbjct: 199 GDLDAAQDLLNEM 211
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI 362
++ DV I+ K G A+ F EM G+ N +T+ +I+ +C G A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 363 LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKR 422
+ + M++K P+ T LI ++++VSEA EI + +R S P+ +Y +I
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR-WSIFPTTITYNSMIDG 124
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
C+ ++++A ++ MA KG PD+ + I GY K + EM R
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 120 VQALSIIKSALVSRCLFDCN--NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKID 177
++A +I +A+V R D N NA F EM K ++ +I S +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF---PNVLTYNCMIDSFCHSGRWS 62
Query: 178 GSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDV 237
+ +++R + + I+P I T + LI+ K + I++E+ + + P
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML-------RWSIFPTT 115
Query: 238 HSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
++N ++ GF + ++ + + + M GC P++ +++ L+ +C ++ +++ E
Sbjct: 116 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 175
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
M +G+ + Y T+I GF + G ++ A++ EM GV + +TF ++ G C +
Sbjct: 176 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 235
Query: 358 VDSAILVYKDMLQK 371
+ A + +D LQK
Sbjct: 236 LRKAFAILED-LQK 248
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 175/406 (43%), Gaps = 76/406 (18%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
D Y+Y+T++ R L +A + + + +A F
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQV---------------------------FEEMKAAGF 310
Query: 162 VFDLLIKSCL-----ELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG 216
+D + + L + + +++++ + G SP I T N LIS A+ G
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD-------G 363
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
+ E L++ ++ +PDV ++ L+ GF R G++E ++ EM GC PN+ ++N
Sbjct: 364 MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFN 423
Query: 277 ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
+ ++ GK E K+++E+ V GL D+ +NT++ F ++G + FKEM+
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC------EK 390
G TF LI+ Y + G + A+ VY+ ML P+ ST ++ L +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYEL-----LIKRLCED---GQME------------ 430
++V +E R ++++C +Y L+ L E+ G +E
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 431 --------EALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAA 468
EA + +++ +GF PD+ ++ + Y G QM A
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY---GRRQMVA 646
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 159/352 (45%), Gaps = 49/352 (13%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F + L+ K++ ++ I +R+ G P I T N I G F E
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN-------RGKFTE 437
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ + D + L PD+ ++N L+ F ++G + V+ EM+R G VP ++N L++
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
+ G +A ++ M G+ D++ YNT++ + G E++E+ EME G +
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 341 NSVTFEHLINGYC---KVG-------DVDSAIL-------------------------VY 365
N +T+ L++ Y ++G +V S ++ +
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLI---KR 422
++ ++ F P+ +T+ ++ ++ V++A ++ + M++ F PS +Y L+ R
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL-DYMKERGFTPSMATYNSLMYMHSR 676
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ G+ EE L+ ++ KG +PD+ Y+ I Y + + A+ + EM
Sbjct: 677 SADFGKSEEILR---EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 8/231 (3%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM----REA 291
DV+S+ L+ F G V+ +ME GC P L +YN+++ +F GKM +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF---GKMGTPWNKI 263
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
L E+M+ G+ D YNT+I + ++A + F+EM+ G + VT+ L++
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
Y K A+ V +M+ F P T LI + EA+E ++N M + P
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME-LKNQMAEKGTKP 382
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+Y L+ G++E A+ + +M G +P++ ++AFI+ Y G
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 120/233 (51%), Gaps = 6/233 (2%)
Query: 244 MMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGL 303
M+G ++G + ++N ++ G ++YSY L++ F G+ REA ++++M G
Sbjct: 182 MLG--KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 304 RLDVTAYNTIIGGFYKSGQ-IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV-DSA 361
+ + YN I+ F K G K ++M+ G+ ++ T+ LI CK G + A
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEA 298
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
V+++M F + T L++ + R EA++++ N M F PS +Y LI
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL-NEMVLNGFSPSIVTYNSLIS 357
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
DG ++EA++L+ +MA KG +PD+ Y + G+++ G + A ++ EM
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 174/421 (41%), Gaps = 59/421 (14%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD-CN-NAPVKF------FEMLLKTY 153
D+++Y+T++ RA A+SI + + C + C NA +K F ++K +
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 154 RQCDSAPFVFDLLIKSCL----ELKKIDGSIE-IVRMLRSRGISPQIRTCNLLISCVAKC 208
+ + D++ + L +D + + + ++ G P+ T N LIS ++C
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
++R + D+ V PD+ ++N ++ R G E E+V EME C
Sbjct: 503 GSFEQAMTVYRRML-----DAGVT--PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 269 VPNLYSYNILMALFCGEGK------------------------------------MREAE 292
PN +Y L+ + GK + EAE
Sbjct: 556 KPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+ + E++ +G D+T N+++ + + + KA M+ G + T+ L+ +
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+ D + + +++L K +P+ + +I C R+ +A I + MR+ P
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF-SEMRNSGIVPD 733
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
+Y I D EEA+ + M G P+ Y++ ++GY KL N + A L +
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL-NRKDEAKLFV 792
Query: 473 E 473
E
Sbjct: 793 E 793
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 138/331 (41%), Gaps = 42/331 (12%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
++ + + + G P + T N++++ K + +I L + + PD +
Sbjct: 227 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP------WNKITSLVEKMKSDGIAPDAY 280
Query: 239 SFNDLMM---------------------GFYRD-----------GEMEMIEE---VWNEM 263
++N L+ GF D G+ +E V NEM
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
G P++ +YN L++ + +G + EA +L +M KG + DV Y T++ GF ++G++
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
E A F+EM G + N TF I Y G + ++ ++ P+ T L
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
+ + SE + + M+ F P R+++ LI G E+A+ + +M G
Sbjct: 461 LAVFGQNGMDSEVSGVFKE-MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
PDL Y+ + + G + + ++ EM
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 22/289 (7%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRC----LFDC-------NNAPVKFFEMLL 150
DL +Y+T++ L+R + Q+ ++ RC L C N + L
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 151 KTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
+ P + L+ C + + + L+ RG SP I T N ++S +
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
+ G+ D + P + ++N LM R + EE+ E+ G
Sbjct: 643 QMVAKANGVL-------DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
P++ SYN ++ +C +MR+A +++ EMR G+ DV YNT IG + E+A
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
+ M G N T+ +++GYCK+ D A L +D+ ++ P A
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL--RNLDPHA 802
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD+ + N ++ + R + V + M+ G P++ +YN LM + ++E++
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
E+ KG++ D+ +YNT+I + ++ ++ A F EM G+ + +T+ I Y
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA---LEIIRN 402
+ AI V + M++ RP +T +++G C+ R EA +E +RN
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 156/380 (41%), Gaps = 47/380 (12%)
Query: 138 CNNAPVKFFEMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
C ++ + L++ R+ +P ++ LIK + +D ++ + + GI P
Sbjct: 167 CKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNR 226
Query: 196 RTCNLLISCVAKCKGSCAGYG---IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGE 252
TCN+++ A C+ G + EI ++ + D+ LM +++G
Sbjct: 227 VTCNIIVH--ALCQKGVIGNNNKKLLEEILDSSQANAPL----DIVICTILMDSCFKNGN 280
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+ EVW EM + + YN+++ C G M A +M +G+ DV YNT
Sbjct: 281 VVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNT 340
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC------------------- 353
+I K G+ ++A + M+ GGV + ++++ +I G C
Sbjct: 341 LISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSS 400
Query: 354 ----------------KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
+ GD SA+ V ML +P T LI G + R+ +A
Sbjct: 401 LLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAW 460
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
++N MR P +Y LL+ C G + A +L +M +G +PD+ Y + G
Sbjct: 461 -WVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRG 519
Query: 458 YKKLGNDQMAATLIMEMSRT 477
G + A +L+ + T
Sbjct: 520 LCWKGRLKKAESLLSRIQAT 539
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 40/279 (14%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P + + N L+ G + G +E + + EM G PN SYN L+ C + +A L
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 295 WEEMRVKGLR---------------------------------------LDVTAYNTIIG 315
+ M G+R LD+ ++
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMD 273
Query: 316 GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP 375
+K+G + +A E +KEM V ++SV + +I G C G++ +A DM+++ P
Sbjct: 274 SCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP 333
Query: 376 EASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
+ T LI LC++ + EA + + M++ P + SY+++I+ LC G + A +
Sbjct: 334 DVFTYNTLISALCKEGKFDEACD-LHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 436 QAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
M P++ +++ I+GY + G+ A +++ M
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
+M C +GK+ A L ++M G+ + +N ++ G K+G IEKA+ +EM G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE-------- 389
N V++ LI G C V +VD A+ ++ M + RP T +++ LC+
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 390 KKRVSEALEIIR-NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
KK + E L+ + NA D+ C +L+ ++G + +AL++ +M+ K D
Sbjct: 247 KKLLEEILDSSQANAPLDIVIC------TILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+Y+ I G GN A + +M +
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVK 328
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 42/260 (16%)
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
+HS +M G+++ + +M G +P L ++N L+ C G + +A+ L
Sbjct: 123 IHS--SIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC--- 353
EMR G + +YNT+I G ++KA F M G+ N VT +++ C
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 354 ------------------------------------KVGDVDSAILVYKDMLQKDFRPEA 377
K G+V A+ V+K+M QK+ ++
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 378 STIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQA 437
++I GLC + A + + ++ P +Y LI LC++G+ +EA L
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKR-GVNPDVFTYNTLISALCKEGKFDEACDLHG 359
Query: 438 KMAGKGFEPDLKIYDAFIEG 457
M G PD Y I+G
Sbjct: 360 TMQNGGVAPDQISYKVIIQG 379
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVW--NEMERFGCVPNLYSYNILMALFCGEGKMRE 290
++P+V++ N L+ G+ + G + I+ W NEM P+ +YN+L+ C G +R
Sbjct: 436 VKPNVYTNNALIHGYVKGGRL--IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRL 493
Query: 291 AEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLIN 350
A +L++EM +G + D+ Y ++ G G+++KAE ++ G+ + V F L
Sbjct: 494 AFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAK 553
Query: 351 GYCKVGDVDSAILVYKDMLQKDFR 374
Y ++ A LVYK L R
Sbjct: 554 KYTRLQRPGEAYLVYKKWLATRNR 577
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
++ ++ ++ S G+ P + T N LI G G G + + +++ ++ PD
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALI------HGYVKG-GRLIDAWWVKNEMRSTKIHPDTT 476
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
++N L+ G + + ++++EM R GC P++ +Y L+ C +G++++AE L +
Sbjct: 477 TYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Query: 299 RVKGLRLD 306
+ G+ +D
Sbjct: 537 QATGITID 544
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 15/292 (5%)
Query: 186 LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
++ RG+ + + N+LIS + K A + G+R+ + PD+ +FN +M
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYK----GMREKG----IEPDIATFNIMMN 581
Query: 246 GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
+ G+ E I ++W++M+ G P+L S NI++ + C GKM EA + +M + +
Sbjct: 582 SQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHP 641
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMEL---GGVESNSVTFEHLINGYCKVGDVDSAI 362
++T Y + S + ++A+ FK E G++ + + LI CK+G A
Sbjct: 642 NLTTYRIFLD---TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698
Query: 363 LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKR 422
+V DM + F P+ T L+ G V +AL + M + P+ +Y +I+
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY-SVMMEAGISPNVATYNTIIRG 757
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
L + G ++E K ++M +G PD Y+A I G K+GN + + T+ EM
Sbjct: 758 LSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM 809
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 18/305 (5%)
Query: 176 IDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVR--- 232
IDG ++ +R++ + +I NL+ + + + L + R
Sbjct: 203 IDGFCKVGNFVRAKALVDEISELNLITHTI-----------LLSSYYNLHAIEEAYRDMV 251
Query: 233 ---LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
PDV +F+ ++ + G++ + EME PN +Y L+ R
Sbjct: 252 MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYR 311
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
A L+ +M V+G+ +D+ Y ++ G +K+G + +AE+ FK + N VT+ L+
Sbjct: 312 HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 371
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+G CK GD+ SA + ML+K P T +I G +K + EA+ ++R M D +
Sbjct: 372 DGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK-MEDQNV 430
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
P+ +Y +I L + G+ E A++L +M G E + I DA + K++G +
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 470 LIMEM 474
L+ +M
Sbjct: 491 LVKDM 495
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 33/258 (12%)
Query: 235 PDVHSFNDLMMGFYRDGEM-EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
PD +N L+ F +G + + + ++++M G P++++ N+L+ FC G++ A
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L +R + + +D YNT+I G + G ++A +F EM G+ ++V++ LI+G+C
Sbjct: 151 L---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFC 207
Query: 354 KVGD----------------VDSAILV------------YKDMLQKDFRPEASTIGMLIE 385
KVG+ + IL+ Y+DM+ F P+ T +I
Sbjct: 208 KVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIIN 267
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
LC+ +V E ++R M ++S P+ +Y L+ L + AL L ++M +G
Sbjct: 268 RLCKGGKVLEGGLLLRE-MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 326
Query: 446 PDLKIYDAFIEGYKKLGN 463
DL +Y ++G K G+
Sbjct: 327 VDLVVYTVLMDGLFKAGD 344
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 126/299 (42%), Gaps = 8/299 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F++++ S + +G +++ ++S GI P + +CN+++ G G E
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVV-------GMLCENGKMEEAI 628
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
+ + + + P++ ++ + + + I + + +G + YN L+A
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C G ++A + +M +G D +N+++ G++ + KA + M G+ N
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
T+ +I G G + +M + RP+ T LI G + + ++ I
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCE 808
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
+ D P +Y +LI G+M +A +L +M +G P+ Y I G KL
Sbjct: 809 MIAD-GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 129/275 (46%), Gaps = 12/275 (4%)
Query: 154 RQCDSAPFVF--DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGS 211
+ C P + ++++ E K++ +I I+ + I P + T + + +K K +
Sbjct: 600 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA 659
Query: 212 CAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPN 271
A IF + ++ +N L+ + G + V +ME G +P+
Sbjct: 660 DA-------IFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 272 LYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
++N LM + +R+A + M G+ +V YNTII G +G I++ +++
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
EM+ G+ + T+ LI+G K+G++ ++ +Y +M+ P+ ST +LI
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832
Query: 392 RVSEALEIIRN-AMRDVSFCPSRKSYELLIKRLCE 425
++ +A E+++ R VS P+ +Y +I LC+
Sbjct: 833 KMLQARELLKEMGKRGVS--PNTSTYCTMISGLCK 865
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+V ++ L+ G + G++ E + +M +PN+ +Y+ ++ + +G + EA L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+M + + + Y T+I G +K+G+ E A E KEM L GVE N+ + L+N +
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
+G + + KDM+ K + LI+ + K EA M++
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLID-VFFKGGDEEAALAWAEEMQERGMPWDVV 540
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
SY +LI + + G++ + M KG EPD+ ++ + +K G+ +
Sbjct: 541 SYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSE 590
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS---CVAKCKGSCAGYGIF 218
V++ LI + +L + ++ + +RG P T N L+ + + + + Y +
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
E + P+V ++N ++ G G ++ +++ +EM+ G P+ ++YN L
Sbjct: 740 ME----------AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 789
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
++ G M+ + ++ EM GL + YN +I F G++ +A E KEM GV
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 339 ESNSVTFEHLINGYCKV 355
N+ T+ +I+G CK+
Sbjct: 850 SPNTSTYCTMISGLCKL 866
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 304 RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV-DSAI 362
R+ V+ ++T+ + ++ A M GV +S + LI+ + G V D
Sbjct: 55 RVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVS 114
Query: 363 LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKR 422
L+Y M+ P+ + +LI C+ R+S A+ ++RN + + +Y +I
Sbjct: 115 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTV----TYNTVISG 170
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
LCE G +EA + ++M G PD Y+ I+G+ K+GN A L+ E+S
Sbjct: 171 LCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 158/343 (46%), Gaps = 28/343 (8%)
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI---------SCVAKCK 209
+P ++ +I ++++ D + ++ +++SR + I T +LI S C
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 210 GSCAGYGIFREIFGL-----------RDGDS-------KVRLRPDVHSFNDLMMGFYRDG 251
YG + R ++ K R PDV + +L+ G+ R G
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAG 269
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
E+ E+V+ EM+ G PN+Y+Y+I++ C G++ A ++ +M G + +N
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
++ K+G+ EK + + +M+ G E +++T+ LI +C+ ++++A+ V M++K
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Query: 372 DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEE 431
AST + + EKKR + + M + P+ +Y +L++ +
Sbjct: 390 KCEVNASTFNTIFRYI-EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 432 ALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
LK++ +M K EP++ Y + + +G+ A L EM
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 154/346 (44%), Gaps = 30/346 (8%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDS 158
C+ D ++S ++ LSR R +A S FF+ L + +
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQS--------------------FFDSLKDRF---EP 253
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
V+ L++ +I + ++ + ++ GI P + T +++I + +C + +F
Sbjct: 254 DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
++ DS P+ +FN+LM + G E + +V+N+M++ GC P+ +YN L
Sbjct: 314 ADML-----DSGCA--PNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ C + + A K+ M K ++ + +NTI K + A + +M
Sbjct: 367 IEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
E N+VT+ L+ + D + + K+M K+ P +T +L+ C + A +
Sbjct: 427 EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYK 486
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+ + + + PS YE+++ +L GQ+++ +L KM KG
Sbjct: 487 LFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 91/207 (43%), Gaps = 8/207 (3%)
Query: 273 YSYNILMALFCGEGKMREAEKLW---EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
+ YN ++ L GK+R+ + W + M+ + + + + + +I + ++G +A
Sbjct: 152 HPYNEMIDL---SGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHC 208
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
F ME G + + F +I+ + A + D L+ F P+ L+ G C
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCR 267
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
+SEA ++ + M+ P+ +Y ++I LC GQ+ A + A M G P+
Sbjct: 268 AGEISEAEKVFKE-MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI 326
Query: 450 IYDAFIEGYKKLGNDQMAATLIMEMSR 476
++ + + K G + + +M +
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKK 353
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 170/383 (44%), Gaps = 23/383 (6%)
Query: 107 STIVHILSRARLKVQALSIIKSALVSRC------------LFDCNNAPVKFFEMLLKTYR 154
S +V L RA++ +ALS+ A +C + K E+ +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 155 QCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSC 212
+ D P + LI S +L + D +I + ++ + P + L+ K
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 213 AGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNL 272
+F E+ + P V+++ +L+ G + G ++ + +M R G P++
Sbjct: 286 KALDLFEEM-------KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS-GQIEKAEEFFK 331
N LM + G++ E ++ EM + V +YNT+I ++S + + +F
Sbjct: 339 VFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFD 398
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
+M+ V + T+ LI+GYCK V+ A+L+ ++M +K F P + LI L + K
Sbjct: 399 KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
R A E+ + + SR Y ++IK + G++ EA+ L +M +G PD+ Y
Sbjct: 459 RYEAANELFKELKENFGNVSSR-VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAY 517
Query: 452 DAFIEGYKKLGNDQMAATLIMEM 474
+A + G K G A +L+ +M
Sbjct: 518 NALMSGMVKAGMINEANSLLRKM 540
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 162/374 (43%), Gaps = 27/374 (7%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP 160
HD +Y T++ L ARL + I+ E++ TY +P
Sbjct: 124 HDCSTYMTLIRCLEEARLYGEMYRTIQ-------------------EVVRNTY--VSVSP 162
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
V L+K+ K + ++ + + R P T N +I + + + ++ E
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ +GD PD +++ L+ + + G + +++EM+ P Y L+
Sbjct: 223 M--CNEGD----CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
++ GK+ +A L+EEM+ G V Y +I G K+G++++A F+K+M G+
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ V +L+N KVG V+ V+ +M P + +I+ L E K +
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ M+ S PS +Y +LI C+ ++E+AL L +M KGF P Y + I K
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 461 LGNDQMAATLIMEM 474
+ A L E+
Sbjct: 457 AKRYEAANELFKEL 470
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 160/408 (39%), Gaps = 95/408 (23%)
Query: 146 FEMLLKTYRQC---DSAPFVFDLLIKSCLE---------------LKKIDGSIEIVRMLR 187
+ L+ +Y + DSA +FD + +C++ + K++ ++++ ++
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 188 SRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGF 247
G SP + T LI + K YG ++++ LRDG L PDV N+LM
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM--LRDG-----LTPDVVFLNNLMNIL 348
Query: 248 YRDGEMEMIEEVWNEMERFGCVPNLYSYN------------------------------- 276
+ G +E + V++EM + C P + SYN
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 277 -----ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
IL+ +C ++ +A L EEM KG AY ++I K+ + E A E FK
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
E++ +S + +I + K G + A+ ++ +M + P+ L+ G+ +
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 392 RVSEALEIIRN----------------------------------AMRDVSFCPSRKSYE 417
++EA ++R ++ P +Y
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
L+ G EEA ++ +M KGFE D Y + ++ + +++
Sbjct: 589 TLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEK 636
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 251 GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
G+ E V EM G +P+ +Y+ ++ C KM A L+EEM+ GL DV Y
Sbjct: 421 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 480
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
++ F K+G IE+A ++F EM G N VT+ LI+ Y K V A +++ ML
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 540
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIR---------------NAMRDVSFCPSRKS 415
+ P T LI+G C+ +V +A +I D S P+ +
Sbjct: 541 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 600
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
Y L+ C+ ++EEA KL M+ +G EP+ +YDA I+G K+G A + EMS
Sbjct: 601 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 660
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 17/261 (6%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
+V P+V ++ L+ + + ++ E++ M GC+PN+ +Y+ L+ C G++
Sbjct: 505 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 564
Query: 290 EAEKLWEEM----------------RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
+A +++E M R +V Y ++ GF KS ++E+A + M
Sbjct: 565 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 624
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
+ G E N + ++ LI+G CKVG +D A V +M + F T LI+ + KR
Sbjct: 625 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 684
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
A +++ + M + S P+ Y +I LC+ G+ +EA KL M KG +P++ Y A
Sbjct: 685 DLASKVL-SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 743
Query: 454 FIEGYKKLGNDQMAATLIMEM 474
I+G+ +G + L+ M
Sbjct: 744 MIDGFGMIGKIETCLELLERM 764
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 168/399 (42%), Gaps = 32/399 (8%)
Query: 71 FSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSAL 130
+S++ L + + L F F + D+Y+Y+ +V +A L QA
Sbjct: 445 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR------- 497
Query: 131 VSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRG 190
K+F + + C + LI + L+ KK+ + E+ + S G
Sbjct: 498 -------------KWFNEMREV--GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 542
Query: 191 ISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRD-GDSKVRL--------RPDVHSFN 241
P I T + LI K IF + G +D D + RP+V ++
Sbjct: 543 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 602
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
L+ GF + +E ++ + M GC PN Y+ L+ C GK+ EA+++ EM
Sbjct: 603 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 662
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G + Y+++I ++K + + A + +M N V + +I+G CKVG D A
Sbjct: 663 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 722
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
+ + M +K +P T +I+G ++ LE++ M P+ +Y +LI
Sbjct: 723 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER-MGSKGVAPNYVTYRVLID 781
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
C++G ++ A L +M + Y IEG+ K
Sbjct: 782 HCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 820
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 164/395 (41%), Gaps = 51/395 (12%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDS 158
CL ++ +YS ++ +A +A I + C + V +M K Y
Sbjct: 543 CLPNIVTYSALIDGHCKAGQVEKACQIFERM--------CGSKDVPDVDMYFKQYDDNSE 594
Query: 159 APFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG 216
P V + L+ + +++ + +++ + G P + LI + K G
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV-------G 647
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
E ++ S+ +++++ L+ +++ ++ +V ++M C PN+ Y
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 707
Query: 277 ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
++ C GK EA KL + M KG + +V Y +I GF G+IE E + M
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ-------------------------- 370
GV N VT+ LI+ CK G +D A + ++M Q
Sbjct: 768 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 827
Query: 371 -------KDFRPEASTIGMLIEGLCEKKRVSEALEIIRN-AMRDVSFCPSRKSYELLIKR 422
D P S +LI+ L + +R+ AL ++ A + +Y LI+
Sbjct: 828 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 887
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
LC ++E A +L ++M KG P+++ + + I+G
Sbjct: 888 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 922
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 7/220 (3%)
Query: 262 EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
E E F VP+ Y L++ C EA MR +V Y+T++ G
Sbjct: 253 ETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKK 310
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIG 381
Q+ + + M + G + F L++ YC GD A + K M++ P
Sbjct: 311 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 370
Query: 382 MLIEGLCEKKRV--SEALEIIRNA---MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
+LI +C K + L++ A M ++ + + LC G+ E+A +
Sbjct: 371 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 430
Query: 437 AKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+M G+GF PD Y + ++A L EM R
Sbjct: 431 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 116/308 (37%), Gaps = 69/308 (22%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK------ 209
C+ V+D LI ++ K+D + E+ + G + T + LI K K
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688
Query: 210 --------GSCA-GYGIFREIFGLRDGDSKVR----------------LRPDVHSFNDLM 244
SCA I+ E+ DG KV +P+V ++ ++
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMI---DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745
Query: 245 MGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLR 304
GF G++E E+ M G PN +Y +L+ C G + A L EEM+
Sbjct: 746 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 805
Query: 305 LDVTAYNTIIGGFYKS-----------GQIEKA----------EEFFK----EMELGGVE 339
Y +I GF K GQ + A + K EM L +E
Sbjct: 806 THTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 865
Query: 340 ----------SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
S T+ LI C V++A ++ +M +K PE + LI+GL
Sbjct: 866 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 925
Query: 390 KKRVSEAL 397
++SEAL
Sbjct: 926 NSKISEAL 933
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 11/265 (4%)
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSR-GISPQIRTC 198
NA F EM R C + F+ L+ + KK D E+ L + I P I +
Sbjct: 127 NAQKVFEEM---PNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSY 183
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N LI + C+ E L D L+PD+ +FN L++ Y G+ E+ EE
Sbjct: 184 NTLIKAL--CEKDS-----LPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEE 236
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
+W +M ++ +YN + E K +E L+ E++ GL+ DV ++N +I G
Sbjct: 237 IWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSI 296
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
G++++AE ++KE+ G + TF L+ CK GD +SAI ++K+ K + +
Sbjct: 297 NEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQT 356
Query: 379 TIGMLIEGLCEKKRVSEALEIIRNA 403
T+ L++ L + + EA EI++ A
Sbjct: 357 TLQQLVDELVKGSKREEAEEIVKIA 381
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 152/380 (40%), Gaps = 66/380 (17%)
Query: 106 YSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF---- 161
+S+ ++S A+S + +L S L + P + E K + C+S F
Sbjct: 20 FSSAATVVSEPTAVTAAISPPQKSLTS--LVNGERNPKRIVE---KFKKACESERFRTNI 74
Query: 162 -VFDLLIKSCLELKKIDGSIEIV------RMLRSRGISPQIRTCNLLISCVAKCKGSCAG 214
V+D ++ + K++ EI+ R + G + +I IS K
Sbjct: 75 AVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARI------ISLYGKAGMFENA 128
Query: 215 YGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME-RFGCVPNLY 273
+F E+ RD + V SFN L+ + + +++EE++NE+ + P++
Sbjct: 129 QKVFEEMPN-RD------CKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIV 181
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
SYN L+ C + + EA L +E+ KGL+ D+ +NT++ Y GQ E EE
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEE----- 236
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
++ M++K+ + T + GL + +
Sbjct: 237 ------------------------------IWAKMVEKNVAIDIRTYNARLLGLANEAKS 266
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
E + + ++ P S+ +I+ +G+M+EA ++ G+ PD +
Sbjct: 267 KELVNLF-GELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFAL 325
Query: 454 FIEGYKKLGNDQMAATLIME 473
+ K G+ + A L E
Sbjct: 326 LLPAMCKAGDFESAIELFKE 345
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 143/314 (45%), Gaps = 8/314 (2%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
V++ LI + G+ E++R + +GISP + + + LI+ + G
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS-------GQIELA 300
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER-FGCVPNLYSYNILMA 280
F K P++++ + L+ G + G ++WN+M R FG PN+ +YN L+
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
FC G + +A ++ M G ++ Y ++I GF K G ++ A + +M G
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N V + +++ C+ A + + M +++ P T I+GLC+ R+ A ++
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
R + P+ +Y L+ L + ++EEA L ++ +G E Y+ + G
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 461 LGNDQMAATLIMEM 474
G +A L+ +M
Sbjct: 541 AGLPGIALQLVGKM 554
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 151/320 (47%), Gaps = 14/320 (4%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F +++L+K+ + K+DG+ +++ + ++G P + +IS + + G+ +E
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE-------VGLVKE 234
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
L + R P V +N L+ G ++ + + E+ EM G PN+ SY+ L+
Sbjct: 235 GRELAE-----RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG-GVE 339
+ C G++ A +M +G ++ ++++ G + G A + + +M G G++
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
N V + L+ G+C G++ A+ V+ M + P T G LI G ++ + A+
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV-Y 408
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
I N M CP+ Y +++ LC + +EA L M+ + P + ++AFI+G
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC 468
Query: 460 KLGNDQMAATLIMEMSRTQK 479
G A + +M + +
Sbjct: 469 DAGRLDWAEKVFRQMEQQHR 488
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 30/259 (11%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P V +N ++ + ++MI V+ +M+R G PN+++YN+L+ C K+ A+KL
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 295 WEEMRVKGLRLD------------------------------VTAYNTIIGGFYKSGQIE 324
EM KG D V+ YN +I G K +
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYK 263
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
A E +EM G+ N +++ LIN C G ++ A ML++ P T+ L+
Sbjct: 264 GAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV 323
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+G + +AL++ +R P+ +Y L++ C G + +A+ + + M G
Sbjct: 324 KGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 445 EPDLKIYDAFIEGYKKLGN 463
P+++ Y + I G+ K G+
Sbjct: 384 SPNIRTYGSLINGFAKRGS 402
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 153/368 (41%), Gaps = 61/368 (16%)
Query: 138 CNNAPVK----FFEMLLKTYRQCDSAPFVFDLLIKSC-LELKKIDGSIEIVRMLRSRGIS 192
CN+ ++ F +LK R C + L+K C L D +M+R G+
Sbjct: 292 CNSGQIELAFSFLTQMLK--RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 193 PQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGE 252
P + N L+ +G C+ I + + + ++ P++ ++ L+ GF + G
Sbjct: 350 PNVVAYNTLV------QGFCSHGNIVKAV-SVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMR------------- 299
++ +WN+M GC PN+ Y ++ C K +EAE L E M
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 300 -VKGL----RLD------------------VTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
+KGL RLD + YN ++ G K+ +IE+A +E+ +
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
GVE +S T+ L++G C G A+ + M+ P+ T+ M+I C++ + A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 397 LEIIRNAMRDVSFCPSRK------SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
+ M D+ C RK SY +I LC E+ + L +M G P +
Sbjct: 583 AQ-----MLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIAT 637
Query: 451 YDAFIEGY 458
+ I +
Sbjct: 638 WSVLINCF 645
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 15/272 (5%)
Query: 212 CAGYGIFREIFG-------LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
C GYG F ++D D P ++ ++ + ++ + + + M
Sbjct: 93 CRGYGRVHRPFDSLRVFHKMKDFDCD----PSQKAYVTVLAILVEENQLNLAFKFYKNMR 148
Query: 265 RFGCVPNLYSYNILMALFC-GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
G P + S N+L+ C +G + K++ EM +G D Y T+I G + G+I
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI 208
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
++A++ F EM VT+ LING C +VD A+ ++M K P T L
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFC-PSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
++GLC+ R +A+E+ M C P+ +Y LI LC++ +++EA++L +M +
Sbjct: 269 MDGLCKDGRSLQAMELFEMMM--ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
G +PD +Y I G+ + + AA + EM
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 2/219 (0%)
Query: 230 KVRLRPDVHSFNDLMMGFYR-DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM 288
++ L P V S N L+ R DG ++ +++ EM + GC P+ Y+Y L++ C G++
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI 208
Query: 289 REAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
EA+KL+ EM K V Y ++I G S +++A + +EM+ G+E N T+ L
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS 408
++G CK G A+ +++ M+ + RP T LI GLC+++++ EA+E++ + M
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELL-DRMNLQG 327
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
P Y +I C + EA +M G P+
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 149/342 (43%), Gaps = 48/342 (14%)
Query: 155 QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSC-A 213
CD + + ++ +E +++ + + + +R G+ P + + N+LI + + G+ A
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
G IF E+ K PD +++ L+ G R G ++ ++++ EM C P +
Sbjct: 176 GLKIFLEM-------PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
+Y L+ CG + EA + EEM+ KG+ +V Y++++ G K G+ +A E F+ M
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
G N VT+ LI G CK + A+ + M + +P+A G +I G C +
Sbjct: 289 MARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKF 348
Query: 394 SEAL--------------------------EIIRN--------------AMRDVSFCPSR 413
EA E++R +MR
Sbjct: 349 REAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEV 408
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
++ E L+K LC+ G+ ++A++L ++ G P + I
Sbjct: 409 ETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 2/218 (0%)
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
V+++M+ F C P+ +Y ++A+ E ++ A K ++ MR GL V + N +I
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 319 KS-GQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
++ G ++ + F EM G + +S T+ LI+G C+ G +D A ++ +M++KD P
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 378 STIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQA 437
T LI GLC K V EA+ + M+ P+ +Y L+ LC+DG+ +A++L
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEE-MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 438 KMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
M +G P++ Y I G K Q A L+ M+
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 22/309 (7%)
Query: 120 VQALSIIKSALVSRCLFDCN-NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDG 178
V +L+++ AL C D +A +K F + K R CD + + LI +ID
Sbjct: 156 VASLNVLIKAL---CRNDGTVDAGLKIFLEMPK--RGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
+ ++ + + +P + T LI+ G C + + L + SK + P+V
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLIN------GLCGSKNVDEAMRYLEEMKSK-GIEPNVF 263
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
+++ LM G +DG E++ M GC PN+ +Y L+ C E K++EA +L + M
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF-------EHLING 351
++GL+ D Y +I GF + +A F EM LGG+ N +T+ ++ G
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG 383
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
C A +Y M + E T+ L++ LC+K +A++++ + D P
Sbjct: 384 LC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI-P 441
Query: 412 SRKSYELLI 420
S+ +++LLI
Sbjct: 442 SKGTWKLLI 450
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
D +++ ++ + + + AE+ M++ + + GY +V ++ V+
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLC- 424
M D P ++ L E+ +++ A + +N MR++ P+ S +LIK LC
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN-MREIGLPPTVASLNVLIKALCR 168
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
DG ++ LK+ +M +G +PD Y I G + G A L EM
Sbjct: 169 NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 99/171 (57%)
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREA 291
++ PDV +F+ L+ ++G++ EE++ +M R G P +YN ++ FC + ++ +A
Sbjct: 141 QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDA 200
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+++ + M K DV ++T+I G+ K+ +++ E F EM G+ +N+VT+ LI+G
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
+C+VGD+D+A + M+ P T ++ LC KK + +A I+ +
Sbjct: 261 FCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILED 311
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 5/243 (2%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
RPDV +F LM G +G + + + M G P Y ++ C G A
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L +M ++ V YN II K G A+ F EM G+ + +T+ +I+ +C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ G A + +DM+++ P+ T LI L ++ +VSEA EI + +R F P+
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF-PTT 181
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+Y +I C+ ++ +A ++ MA K PD+ + I GY K + E
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 474 MSR 476
M R
Sbjct: 242 MHR 244
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
+ ++ V +N ++ +DG + ++ EM G P++ +Y+ ++ FC G+
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
+AE+L +M + + DV ++ +I K G++ +AEE + +M G+ ++T+ +I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+G+CK ++ A + M K P+ T LI G C+ KRV +EI R
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR-GI 247
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
+ +Y LI C+ G ++ A L M G P+ + + +
Sbjct: 248 VANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 1/235 (0%)
Query: 240 FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMR 299
+ ++ G + G+ E + ++ME ++ YN ++ C +G A+ L+ EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 300 VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVD 359
KG+ DV Y+ +I F +SG+ AE+ ++M + + VTF LIN K G V
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
A +Y DML++ P T +I+G C++ R+++A ++ ++M S P ++ L
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML-DSMASKSCSPDVVTFSTL 222
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
I C+ +++ +++ +M +G + Y I G+ ++G+ A L+ M
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 181 EIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG--LRDGDSKVRLRPDVH 238
+++R + R I+P + T + LI+ + K +G + EI+G LR G + P
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVK-EGKVSEA---EEIYGDMLRRG-----IFPTTI 182
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
++N ++ GF + + + + + M C P++ +++ L+ +C ++ +++ EM
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
+G+ + Y T+I GF + G ++ A++ M GV N +TF+ ++ C ++
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 359 DSAILVYKDMLQK 371
A + +D LQK
Sbjct: 303 RKAFAILED-LQK 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
G + VTF L+NG C G V A+ + M+++ +P G +I GLC+ A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 397 LEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
L ++ + M + Y +I RLC+DG A L +M KG PD+ Y I+
Sbjct: 61 LNLL-SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 457 GYKKLGNDQMAATLIMEMSRTQ 478
+ + G A L+ +M Q
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQ 141
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDG 427
M++ RP+ T L+ GLC + RV +AL ++ + + + Y +I LC+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE-----GHQPYGTIINGLCKMG 55
Query: 428 QMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
E AL L +KM + + IY+A I+ K G+ A L EM
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM 102
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 10/330 (3%)
Query: 145 FFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
F EML K + F + +LI + K + +++ + + N +I+
Sbjct: 507 FSEMLEKGLEPNN---FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIING 563
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
+ K + + + + + R S+N ++ GF + G+ + E + EM
Sbjct: 564 LCKVGQTSKAKEMLQNLIKEK------RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G PN+ ++ L+ FC +M A ++ EM+ L+LD+ AY +I GF K ++
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK 677
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
A F E+ G+ N + LI+G+ +G +D+AI +YK M+ + T +I
Sbjct: 678 TAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+GL + ++ A ++ + + D+ P + +L+ L + GQ +A K+ +M K
Sbjct: 738 DGLLKDGNINLASDLY-SELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
P++ +Y I G+ + GN A L EM
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 150/338 (44%), Gaps = 44/338 (13%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
K+D + ++M+ +GI P + N ++ + K IF E+ L G L
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM--LEKG-----LE 516
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+ +++ L+ GF+++ + + +V N+M N YN ++ C G+ +A+++
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Query: 295 WEEM-RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+ + + K + T+YN+II GF K G + A E ++EM G N VTF LING+C
Sbjct: 577 LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 636
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK---------------------- 391
K +D A+ + +M + + + G LI+G C+K
Sbjct: 637 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 392 -------------RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAK 438
++ A+++ + + D C +Y +I L +DG + A L ++
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISC-DLFTYTTMIDGLLKDGNINLASDLYSE 755
Query: 439 MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+ G PD ++ + G K G A+ ++ EM +
Sbjct: 756 LLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKK 793
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 167/381 (43%), Gaps = 69/381 (18%)
Query: 165 LLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG- 223
LL+++ L +K + +++I R + SRG P +L + K + RE+ G
Sbjct: 244 LLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGK 303
Query: 224 -----------------LRDGD--SKVRLRPDVHSF---------NDLMMGFYRDGEMEM 255
+++G+ VR+ ++ F L+ G+ + E+
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY--NTI 313
+++N ME G P+ +++++ FC +M +A + + MR+K +R+ ++ +T+
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY--MRMKSVRIAPSSVLVHTM 421
Query: 314 IGG----------------------------------FYKSGQIEKAEEFFKEMELGGVE 339
I G F K G+++ A F K ME G+E
Sbjct: 422 IQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
N V + +++ +C++ ++D A ++ +ML+K P T +LI+G + K A ++
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALK-LQAKMAGKGFEPDLKIYDAFIEGY 458
I N M +F + Y +I LC+ GQ +A + LQ + K + Y++ I+G+
Sbjct: 542 I-NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 459 KKLGNDQMAATLIMEMSRTQK 479
K+G+ A EMS K
Sbjct: 601 VKVGDTDSAVETYREMSENGK 621
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 231 VRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMRE 290
VR+ P + ++ G + E E++N+ + + + N + LFC +GK+
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE-SWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 291 AEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLIN 350
A + M KG+ +V YN ++ + ++ A F EM G+E N+ T+ LI+
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC 410
G+ K D +A V M +F +I GLC+ + S+A E+++N +++ +
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
S SY +I + G + A++ +M+ G P++ + + I G+ K +A +
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 471 IMEM 474
EM
Sbjct: 648 THEM 651
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 141/317 (44%), Gaps = 11/317 (3%)
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
P+V ++L S + ID + EI + G++ T LL+ + + IF
Sbjct: 204 VPYVNNVL-SSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIF 262
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME-RFGCVPNLYSYNI 277
R + R + PD F+ + + ++ M ++ EM + G + +Y
Sbjct: 263 RRVMS-RGAE------PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
++ F EG M EA ++ +EM G+ + V A +++ G+ K ++ KA + F ME G
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
+ + V F ++ +CK +++ AI Y M P + + +I+G + + AL
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
EI ++ S+ + C+ G+++ A M KG EP++ Y+ +
Sbjct: 436 EIFNDSFE--SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 458 YKKLGNDQMAATLIMEM 474
+ ++ N +A ++ EM
Sbjct: 494 HCRMKNMDLARSIFSEM 510
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 116/246 (47%), Gaps = 12/246 (4%)
Query: 150 LKTYRQCDS---APFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
++TYR+ +P V F LI + ++D ++E+ ++S + + LI
Sbjct: 610 VETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDG 669
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
K Y +F E+ ++ L P+V +N L+ GF G+M+ +++ +M
Sbjct: 670 FCKKNDMKTAYTLFSEL-------PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G +L++Y ++ +G + A L+ E+ G+ D + ++ G K GQ
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
KA + +EM+ V N + + +I G+ + G+++ A ++ +ML+K + + +L+
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Query: 385 EGLCEK 390
G EK
Sbjct: 843 SGRVEK 848
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREA 291
++ P V N+++ R ++ +E++N+M G + + +LM E K EA
Sbjct: 199 KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG-GVESNSVTFEHLIN 350
K++ + +G D ++ + K+ + A + +EM GV ++ T+ +I
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIV 318
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC 410
+ K G+++ A+ V +M+ L+ G C+ + +AL++ N M +
Sbjct: 319 AFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLF-NRMEEEGLA 377
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
P + + ++++ C++ +ME+A++ +M P + I+G
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
+FN L+ + R+ M+ + + M VP
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPF--------------------------- 203
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
V N ++ +S I++A+E + +M L GV ++VT + L+ +
Sbjct: 204 --------VPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKP 255
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
+ A+ +++ ++ + P+ + ++ C+ + AL+++R + S+++Y
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGND 464
+I ++G MEEA+++ +M G G + + + GY K GN+
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCK-GNE 360
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 134/272 (49%), Gaps = 7/272 (2%)
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
D+ ++S E ++D + ++++ L + P T N L+ + KCK Y E
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE--- 219
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
+RD ++PD+ SF L+ + + +++ G P+ + YN +M FC
Sbjct: 220 MRD---DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
K EA ++++M+ +G+ D YNT+I G K+G++E+A + K M G E ++
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
T+ L+NG C+ G+ A+ + ++M + P T L+ GLC+ + + + +E+
Sbjct: 337 TYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE-M 395
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
M+ Y L++ L + G++ EA ++
Sbjct: 396 MKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 4/249 (1%)
Query: 229 SKVRLRPDVHSFNDLMMGFYR--DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG 286
S+ RP +F L+ R D + + V N M G P+ + +I + C G
Sbjct: 114 SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETG 173
Query: 287 KMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG-GVESNSVTF 345
++ EA+ L +E+ K D YN ++ K + EF EM V+ + V+F
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
LI+ C ++ A+ + + F+P+ +++G C + SEA+ + + M+
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK-MK 292
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
+ P + +Y LI L + G++EEA M G+EPD Y + + G + G
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 466 MAATLIMEM 474
A +L+ EM
Sbjct: 353 GALSLLEEM 361
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F +LI + K + ++ +V L + G P N ++ G+++++
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM- 291
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
+ + PD ++N L+ G + G +E M G P+ +Y LM
Sbjct: 292 ------KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C +G+ A L EEM +G + YNT++ G K+ ++K E ++ M+ GV+ S
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 343 VTFEHLINGYCKVGDVDSAILVY 365
+ L+ K G V A V+
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVF 428
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 111/214 (51%), Gaps = 1/214 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P V FN L+ G++R +++ E++W EM+ P + +Y L+ +C +++ A ++
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
EEM++ + ++ +N II G ++G++ +A + + VT+ L+ +CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
GD+ A + K M+ + P +T + + + E + + + + P R
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI-EAGHSPDRL 426
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+Y L++K LCEDG++ A+++ +M +G +PDL
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDL 460
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 105/250 (42%), Gaps = 9/250 (3%)
Query: 143 VKFFEMLLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNL 200
+K E L + + + P V + LI+ ++++ ++E++ ++ + N
Sbjct: 266 LKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNP 325
Query: 201 LISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVW 260
+I + + G+ F G P + ++N L+ F + G++ ++
Sbjct: 326 IIDGLGEAGRLSEALGMMERFFVCESG-------PTIVTYNSLVKNFCKAGDLPGASKIL 378
Query: 261 NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS 320
M G P +YN F K E L+ ++ G D Y+ I+ +
Sbjct: 379 KMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCED 438
Query: 321 GQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTI 380
G++ A + KEM+ G++ + +T LI+ C++ ++ A + + +++ P+ T
Sbjct: 439 GKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Query: 381 GMLIEGLCEK 390
M+ GL K
Sbjct: 499 KMIDNGLRSK 508
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 199/456 (43%), Gaps = 36/456 (7%)
Query: 3 TSIVKHFFLSPPKPIKAYHLYSSA-STPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLY 61
+S+V+ + +P +++ ++S+ PPS +V+ + +L HR+ + Y
Sbjct: 7 SSLVRALYQTPKS--QSFRIFSTLLHDPPSPD--LVNEISRVLSDHRNPKDDLEHTLVAY 62
Query: 62 STKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQ 121
S + + + Q+ + K+ A RFF + H L SY +V IL ++
Sbjct: 63 SPRVSSNL-VEQVLKRCKNLGFPAHRFFLWARRIPDFA-HSLESYHILVEILGSSK---- 116
Query: 122 ALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIE 181
+++ L+ ++ K F ++ + Y + + L ++C ++ +E
Sbjct: 117 QFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRAN-------LPSEACRAFNRM---VE 166
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFN 241
GI P + + L+ + C + +E FG G V P +++
Sbjct: 167 F-------GIKPCVDDLDQLLHSL--CDKKHVNHA--QEFFGKAKGFGIV---PSAKTYS 212
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
L+ G+ R + +V++EM CV +L +YN L+ C G + K+++EM
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
GL+ D ++ I + +G + A + M+ + N TF H+I CK VD A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
L+ +M+QK P+ T ++ C+ V+ A +++ + M P R +Y +++K
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL-SRMDRTKCLPDRHTYNMVLK 391
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
L G+ + A ++ M+ + F P + Y I G
Sbjct: 392 LLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHG 427
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 209/482 (43%), Gaps = 82/482 (17%)
Query: 50 KSRWT-----NLRSLLYSTKTLTPIHFSQIALQLKS--NPHLALRFFFFTLDNSSLCLHD 102
+S W +R+LL S K SQ+ L+S + +AL+FF++ D HD
Sbjct: 154 RSSWNPKHEGQMRNLLRSLKP------SQVCAVLRSQDDERVALKFFYWA-DRQWRYRHD 206
Query: 103 LYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYR--QCDSAP 160
Y +++ +LS+ +L Q + + R ++ P F +++ R Q A
Sbjct: 207 PMVYYSMLEVLSKTKL-CQGSRRVLVLMKRRGIY---RTPEAFSRVMVSYSRAGQLRDAL 262
Query: 161 FVFDLLIKSCLE---------------LKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
V L+ ++ +E +++ ++ + ++ GI P + T N +I
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI--- 319
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
+G C + + I L D SK L PD S+ +M ++ + + ++ +M +
Sbjct: 320 ---RGYCDLHRVEEAIELLEDMHSKGCL-PDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 266 -FGCVPNLYSYNILMAL-----------------------------------FCGEGKMR 289
G VP+ +YN L+ + C EG+M
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 290 EAEKLWEEMRVKG-LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
EA+ L EM KG DV Y ++ GF + G+++KA++ + M G + N+V++ L
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS 408
+NG C+ G A + + + P + T +++ GL + ++SEA +++R M
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVRE-MVLKG 554
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAA 468
F P LL++ LC DG+ EA K + KG ++ + I G+ + ND++ A
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ--NDELDA 612
Query: 469 TL 470
L
Sbjct: 613 AL 614
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 168/377 (44%), Gaps = 28/377 (7%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIK--------------SALVSRCLFDCNNAPVK--F 145
D +Y+T++H+L++ +AL +K SA+V + + K
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI 441
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
EML K + C + ++ L ++D + ++++++ + G P + L++ +
Sbjct: 442 NEMLSKGH--CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
+ S RE+ + + + P+ +++ +M G R+G++ +V EM
Sbjct: 500 CRTGKSLEA----REMMNMSE---EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVL 552
Query: 266 FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
G P N+L+ C +G+ EA K EE KG ++V + T+I GF ++ +++
Sbjct: 553 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 612
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
A +M L ++ T+ L++ K G + A + K ML K P T +I
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
C+ +V + + I+ +S R Y +I++LC G++EEA L K+
Sbjct: 673 RYCQMGKVDDLVAILEKM---ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASR 729
Query: 446 PDLKIYDAFIEGYKKLG 462
D K A +EGY K G
Sbjct: 730 SDAKTCYALMEGYLKKG 746
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%)
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M+R G +++ +M + G++R+A K+ M+ G+ ++ NT I F ++ +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
+EKA F + M++ G+ N VT+ +I GYC + V+ AI + +DM K P+ +
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
++ LC++KR+ E ++++ ++ P + +Y LI L + +EAL K
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
GF D Y A + K G A LI EM
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 3/244 (1%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+P+ S+ L+ G R G+ E+ N E PN +Y+++M EGK+ EA
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+ EM +KG N ++ + G+ +A +F +E G N V F +I+G+C
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ ++D+A+ V DM + + T L++ L +K R++EA E+++ + P+
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK-GIDPTP 664
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+Y +I R C+ G++++ + + KM + + IY+ IE LG + A TL+ +
Sbjct: 665 VTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGK 722
Query: 474 MSRT 477
+ RT
Sbjct: 723 VLRT 726
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 120/242 (49%), Gaps = 11/242 (4%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
+F+ +M+ + R G++ +V M+R G PNL N + +F ++ +A + E M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
+V G+ +V YN +I G+ ++E+A E ++M G + V++ ++ CK
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK---- 359
Query: 359 DSAILVYKDMLQK-----DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ I+ +D+++K P+ T LI L + EAL +++A ++ F +
Sbjct: 360 EKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA-QEKGFRIDK 418
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGF-EPDLKIYDAFIEGYKKLGNDQMAATLIM 472
Y ++ LC++G+M EA L +M KG PD+ Y A + G+ +LG A L+
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Query: 473 EM 474
M
Sbjct: 479 VM 480
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 191/462 (41%), Gaps = 57/462 (12%)
Query: 67 TPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRA-RL------- 118
TP FS++ + L TL + +L +T + + RA RL
Sbjct: 241 TPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFL 300
Query: 119 -KVQALSIIKSALVSRCLFD--CNNAPVKFFEMLLKTYRQCDSAP---FVFDLLIKSCLE 172
++Q + I+ + + C+ C+ V+ LL+ P + ++ C E
Sbjct: 301 ERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE 360
Query: 173 LKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVR 232
+ ++ + +M + G+ P T N LI + K + ++ L+D K
Sbjct: 361 KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA------LWFLKDAQEK-G 413
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG-CVPNLYSYNILMALFCGEGKMREA 291
R D ++ ++ ++G M +++ NEM G C P++ +Y ++ FC G++ +A
Sbjct: 414 FRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKA 473
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+KL + M G + + +Y ++ G ++G+ +A E E NS+T+ +++G
Sbjct: 474 KKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHG 533
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV---- 407
+ G + A V ++M+ K F P I +L++ LC R EA + + +
Sbjct: 534 LRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Query: 408 ---------SFCPSRK---------------------SYELLIKRLCEDGQMEEALKLQA 437
FC + + +Y L+ L + G++ EA +L
Sbjct: 594 VVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMK 653
Query: 438 KMAGKGFEPDLKIYDAFIEGYKKLGN-DQMAATLIMEMSRTQ 478
KM KG +P Y I Y ++G D + A L +SR +
Sbjct: 654 KMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQK 695
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 147/304 (48%), Gaps = 15/304 (4%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY-GIFR 219
F + LI + + + S+E++ +++ ISP I T N +I+ A+ G G+F
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 220 EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILM 279
E+ +G ++PD+ ++N L+ G + E V+ M G VP+L +Y+ L+
Sbjct: 237 EM--RHEG-----IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Query: 280 ALFCGEGKMREAEK---LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
F GK+R EK L EM G D+T+YN ++ + KSG I++A F +M+
Sbjct: 290 ETF---GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
G N+ T+ L+N + + G D ++ +M + P+A+T +LIE E E
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 397 LEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
+ + + M + + P ++YE +I + G E+A K+ M P K Y IE
Sbjct: 407 VTLFHD-MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
Query: 457 GYKK 460
+ +
Sbjct: 466 AFGQ 469
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 185/436 (42%), Gaps = 44/436 (10%)
Query: 85 ALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSI---IKSALVSRCLFDCN-- 139
+LR F + + C + + Y+ ++ +L R L + L + + S VSR +F
Sbjct: 124 SLRLFKY-MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182
Query: 140 ------NAPVKFFEMLLKTYRQCDSAP--FVFDLLIKSCLELK-KIDGSIEIVRMLRSRG 190
N + LL + +P ++ +I +C +G + + +R G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242
Query: 191 ISPQIRTCNLLIS-CVAKCKGSCA-----------------GYGIFREIFG-LRDGDSKV 231
I P I T N L+S C + G A Y E FG LR +
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 232 RLR---------PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
L PD+ S+N L+ + + G ++ V+++M+ GC PN +Y++L+ LF
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
G+ + +L+ EM+ D YN +I F + G ++ F +M +E +
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
T+E +I K G + A + + M D P + +IE + EAL + N
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL-VAFN 481
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
M +V PS +++ L+ G ++E+ + +++ G + ++A IE YK+ G
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 463 NDQMAATLIMEMSRTQ 478
+ A ++M +++
Sbjct: 542 KFEEAVKTYVDMEKSR 557
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 122/273 (44%), Gaps = 12/273 (4%)
Query: 217 IFREIFGLRDGDSKVRL----------RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
+F+E G D +RL +P+ H + ++ R+G ++ EV++EM
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG-QIEK 325
G +++SY L+ + G+ + +L + M+ + + + YNT+I + G E
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
F EM G++ + VT+ L++ G D A +V++ M P+ +T L+E
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
+ +R+ + +++ M P SY +L++ + G ++EA+ + +M G
Sbjct: 291 TFGKLRRLEKVCDLL-GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 446 PDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
P+ Y + + + G L +EM +
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 109/285 (38%), Gaps = 29/285 (10%)
Query: 96 SSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQ 155
S L D+ SY+ ++ +++ +A+ + + C + N + +LL + Q
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT-----YSVLLNLFGQ 364
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
V L ++ ++S P T N+LI +
Sbjct: 365 SGRYDDVRQLFLE-----------------MKSSNTDPDAATYNILIEVFGEG------- 400
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G F+E+ L + + PD+ ++ ++ + G E ++ M VP+ +Y
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
++ F EA + M G + +++++ F + G ++++E +
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTI 380
G+ N TF I Y + G + A+ Y DM + P+ T+
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTL 565
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 45/348 (12%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ + +L+K +I ++++++++ G++P N L+ A CK G
Sbjct: 183 YTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH--ALCKNGKVGRA---- 236
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
R S+++ P+ +FN L+ + + ++ + + G VP++ + +M
Sbjct: 237 ----RSLMSEMK-EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVME 291
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
+ C EG++ EA ++ E + KG ++DV A NT++ G+ G++ A+ FF EME G
Sbjct: 292 VLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLP 351
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI- 399
N T+ LI GYC VG +DSA+ + DM R +T LI GL R + L+I
Sbjct: 352 NVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKIL 411
Query: 400 --------IRNAMRDVSFCPSRKSY---------ELLIK----------------RLCED 426
+ A D C Y E L+K LCE
Sbjct: 412 EMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEK 471
Query: 427 GQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
G M++ +M G+G P + + I Y + G + + LI +M
Sbjct: 472 GGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 129/258 (50%), Gaps = 20/258 (7%)
Query: 214 GYG---IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWN-EMERFGCV 269
G+G + + + + D SK ++P + FN ++ ++ ++++ E + +M G
Sbjct: 121 GFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIAREFFTRKMMASGIH 179
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
++Y+Y ILM ++ + KL + M+ G+ + YNT++ K+G++ +A
Sbjct: 180 GDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSL 239
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
EM+ E N VTF LI+ YC + ++++ + F P+ T+ ++E LC
Sbjct: 240 MSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCN 295
Query: 390 KKRVSEALEII-----RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+ RVSEALE++ + DV C + L+K C G+M A + +M KG+
Sbjct: 296 EGRVSEALEVLERVESKGGKVDVVACNT------LVKGYCALGKMRVAQRFFIEMERKGY 349
Query: 445 EPDLKIYDAFIEGYKKLG 462
P+++ Y+ I GY +G
Sbjct: 350 LPNVETYNLLIAGYCDVG 367
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/514 (21%), Positives = 207/514 (40%), Gaps = 96/514 (18%)
Query: 25 SASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLL--YSTKTLTPIHFSQIALQLKSNP 82
S PP D I T++ R R ++ L+ + K + S + + +K +
Sbjct: 105 SIGLPPDDA--IFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDI 162
Query: 83 HLALRFFFFTLDNSSLCLHDLYSYSTIVHILS---RARLKVQALSIIKS------ALVSR 133
+A FF + S + D+Y+Y ++ LS R + L I+K+ A+V
Sbjct: 163 DIAREFFTRKMMASGI-HGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 221
Query: 134 CLFD--CNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGI 191
L C N V L+ ++ + F++LI + +K+ S+ ++ S G
Sbjct: 222 TLLHALCKNGKVGRARSLMSEMKEPNDV--TFNILISAYCNEQKLIQSMVLLEKCFSLGF 279
Query: 192 SPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
P + T V K G E + + + DV + N L+ G+ G
Sbjct: 280 VPDVVT-------VTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALG 332
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
+M + + + EMER G +PN+ +YN+L+A +C G + A + +M+ +R + +N
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFN 392
Query: 312 T-------------------------------------IIGGFYKSGQIEKAEEFFKEME 334
T +I GFYK + E A EF +ME
Sbjct: 393 TLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME 452
Query: 335 L------------------GGVESNSVTFEH---------------LINGYCKVGDVDSA 361
GG++ ++ LI+ Y + G ++ +
Sbjct: 453 KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEES 512
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
+ + DM+ + + P +ST +I G C++ +V ++ + + M + P +SY L++
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVED-MAERGCVPDTESYNPLLE 571
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
LC G +++A L ++M K PD ++ + +
Sbjct: 572 ELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 113/264 (42%), Gaps = 38/264 (14%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
++LLI ++ +D +++ +++ I T N LI ++ + G I
Sbjct: 356 YNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEM-- 413
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRD-------------------------------- 250
++D D+ R D +N ++ GFY++
Sbjct: 414 -MQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCE 470
Query: 251 -GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTA 309
G M+ ++ +++M G VP++ + L+ + GK+ E+ +L +M +G +
Sbjct: 471 KGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSST 530
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
+N +I GF K ++ +F ++M G ++ ++ L+ C GD+ A L++ M+
Sbjct: 531 FNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMV 590
Query: 370 QKDFRPEASTIGMLIEGLCEKKRV 393
+K P+ S L+ L +K +
Sbjct: 591 EKSIVPDPSMWSSLMFCLSQKTAI 614
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
V ++++ E+ +++ ++ +V ++++G++P T N ++ + +F E+
Sbjct: 750 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 809
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
S + PD S+ +++G +RDG+++ + M + G +P+ + +++
Sbjct: 810 -------SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 862
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C G + A + +M G + ++ + ++I G K G I++A E +EM G + N
Sbjct: 863 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 922
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKD-FRPEASTIGMLIEGLCEKKRVSEALEII 400
T LI+G CK G + A ++ +++ D ++P T +I G C++ +++ A E++
Sbjct: 923 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA-EML 981
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
+ M++ P+ +Y LI C+ G A +L M +GF P++ Y+A I+
Sbjct: 982 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 1037
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 111/213 (52%)
Query: 251 GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
G +E E V++EM G VP+ SY +++ +GK++EA++ M +G D
Sbjct: 797 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 856
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
I+ ++G + +A +F++M G + N + F LI+G CK G + A + ++M++
Sbjct: 857 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 916
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME 430
++P T LI+GLC++ +A + +R ++ P+ +Y +I C++ ++
Sbjct: 917 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 976
Query: 431 EALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
A L ++M +G P++ Y I G+ K G+
Sbjct: 977 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 1009
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 7/295 (2%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F LI + I + E++ + G P + T LI + CK FR
Sbjct: 891 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL--CKRGWTEKA-FRLFL 947
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
L D+ +P+VH++ ++ G+ ++ ++ E +++ M+ G PN+ +Y L+
Sbjct: 948 KLVRSDT---YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 1004
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
C G A +L M +G ++ YN I K + +A E + G+E++
Sbjct: 1005 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 1064
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
VT+ LI CK D++ A+ + M + F + +LI C +K++ E+ E +
Sbjct: 1065 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES-ERLFQ 1123
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ + P++++Y +I C++G ++ ALK M G PD Y + I G
Sbjct: 1124 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 1178
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 108/200 (54%), Gaps = 2/200 (1%)
Query: 262 EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
+M+ G P+ + N ++ + G + AE +++EM V+G+ D ++Y ++ G ++ G
Sbjct: 773 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 832
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIG 381
+I++A+ + M G ++ T ++ C+ G V+ AI ++ M+ F+P
Sbjct: 833 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 892
Query: 382 MLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMA- 440
LI+GLC+K + +A E++ +R+ + P+ ++ LI LC+ G E+A +L K+
Sbjct: 893 SLIDGLCKKGSIKQAFEMLEEMVRN-GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 951
Query: 441 GKGFEPDLKIYDAFIEGYKK 460
++P++ Y + I GY K
Sbjct: 952 SDTYKPNVHTYTSMIGGYCK 971
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
G++ EA + +M+ +GL N ++ + G IE AE F EM + GV +S ++
Sbjct: 762 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
+ ++ G + G + A M+Q+ F P+ +T +++ LCE V+ A+ R M
Sbjct: 822 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRK-MI 880
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
D+ F P+ ++ LI LC+ G +++A ++ +M G++P++ + A I+G K G +
Sbjct: 881 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 940
Query: 466 MAATLIMEMSRT 477
A L +++ R+
Sbjct: 941 KAFRLFLKLVRS 952
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 142/341 (41%), Gaps = 13/341 (3%)
Query: 138 CNNAPVKFFEMLLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
C + EML ++ P V + LI + + E++ ++ G P I
Sbjct: 970 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 1029
Query: 196 RTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM 255
T N I + K + Y + + F L D ++ L+ + ++
Sbjct: 1030 YTYNAAIDSLCKKSRAPEAYELLNKAFS-------CGLEADGVTYTILIQEQCKQNDINQ 1082
Query: 256 IEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIG 315
+ M + G ++ NIL+A FC + KM+E+E+L++ + GL Y ++I
Sbjct: 1083 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 1142
Query: 316 GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP 375
+ K G I+ A ++F M+ G +S T+ LI+G CK VD A +Y+ M+ + P
Sbjct: 1143 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 1202
Query: 376 EASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
T L C++ + A+ ++ + + ++ L+++LC + ++ A
Sbjct: 1203 PEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWI----RTVRTLVRKLCSEKKVGVAALF 1258
Query: 436 QAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
K+ K D AF + G + + L +SR
Sbjct: 1259 FQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 1299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 129/294 (43%), Gaps = 10/294 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFV--FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLL 201
K F + LK R P V + +I + K++ + + ++ +G+ P + T L
Sbjct: 941 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 1000
Query: 202 ISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWN 261
I+ CK +G E+ L GD P+++++N + + E+ N
Sbjct: 1001 IN--GHCKA--GSFGRAYELMNLM-GDEG--FMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053
Query: 262 EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
+ G + +Y IL+ C + + +A + M G D+ N +I F +
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 1113
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIG 381
+++++E F+ + G+ T+ +I+ YCK GD+D A+ + +M + P++ T G
Sbjct: 1114 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 1173
Query: 382 MLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
LI GLC+K V EA ++ AM D P + L C+ A+ L
Sbjct: 1174 SLISGLCKKSMVDEACKLYE-AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 1226
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 224 LRDGDS---KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+R GDS K +L P +N+L+ R G +E ++ ++ EM P++Y++N L+
Sbjct: 106 MRKGDSFEIKYKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVN 163
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
+C G + EA++ + G D Y + I G + +++ A + FKEM G
Sbjct: 164 GYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHR 223
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N V++ LI G + +D A+ + M + P T +LI+ LC + SEA+ +
Sbjct: 224 NEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLF 283
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ M + P Y +LI+ C ++EA L M G P++ Y+A I+G+ K
Sbjct: 284 KQ-MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 143/299 (47%), Gaps = 4/299 (1%)
Query: 159 APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
P + L+IKSC ++ ++ R +R +G S +I+ L C S A +G+
Sbjct: 79 VPKITILMIKSCNSVRDALFVVDFCRTMR-KGDSFEIKY-KLTPKCYNNLLSSLARFGLV 136
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
E+ L + + PD+++FN L+ G+ + G + ++ + + GC P+ ++Y
Sbjct: 137 EEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSF 196
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ C ++ A K+++EM G + +Y +I G +++ +I++A +M+
Sbjct: 197 ITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNC 256
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
N T+ LI+ C G A+ ++K M + +P+ +LI+ C + EA
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASG 316
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
++ + + + P+ +Y LIK C+ + +A+ L +KM + PDL Y+ I G
Sbjct: 317 LLEHMLEN-GLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 153/371 (41%), Gaps = 28/371 (7%)
Query: 67 TPIHFSQIALQLKSNPHLALRF--FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALS 124
TP H S + L +P AL F + + N H++ SY+++V +L + +
Sbjct: 26 TPSHVSSL-FSLNLDPQTALSFSDWISRIPNFK---HNVTSYASLVTLLCSQEIPYEVPK 81
Query: 125 IIKSALVSRCLFDCNNAPVKFFEM-LLKTYRQCDS-------APFVFDLLIKSCLELKKI 176
I + S CN+ F + +T R+ DS P ++ L+ S +
Sbjct: 82 ITILMIKS-----CNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLV 136
Query: 177 DGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPD 236
+ + + +SP I T N L++ G C G E + PD
Sbjct: 137 EEMKRLYTEMLEDLVSPDIYTFNTLVN------GYCK-LGYVVEAKQYVTWLIQAGCDPD 189
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
++ + G R E++ +V+ EM + GC N SY L+ K+ EA L
Sbjct: 190 YFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLV 249
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
+M+ +V Y +I SGQ +A FK+M G++ + + LI +C
Sbjct: 250 KMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+D A + + ML+ P T LI+G C KK V +A+ ++ + M + + P +Y
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLL-SKMLEQNLVPDLITY 367
Query: 417 ELLIKRLCEDG 427
LI C G
Sbjct: 368 NTLIAGQCSSG 378
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 141/309 (45%), Gaps = 8/309 (2%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
L++ + ++D ++ I+R++ G P T N++I G+ G R L
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMII-------GNLCKKGHIRTALVLL 197
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
+ S PDV ++N ++ + G E W + + GC P + +Y +L+ L C
Sbjct: 198 EDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRY 257
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
A ++ E+M V+G D+ YN+++ + G +E+ + + G+E N+VT+
Sbjct: 258 CGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTY 317
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
L++ C D + M Q + P T +LI GLC+ + +S A++ +
Sbjct: 318 NTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLE 377
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
P +Y ++ + ++G +++A++L + P L Y++ I+G K G +
Sbjct: 378 QKCL-PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 466 MAATLIMEM 474
A L +M
Sbjct: 437 KALELYHQM 445
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 158/363 (43%), Gaps = 24/363 (6%)
Query: 108 TIVHILSRARLKVQALSIIKSALVSRCLFDCNNA--PVKFFEMLLKTYRQCDSAPFVFDL 165
T + +L L +I V RC+FD NA ++F++ L+ C + +
Sbjct: 192 TALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQN--GCPPFMITYTV 249
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
L++ +IE++ + G P I T N L++ C+ G E+ +
Sbjct: 250 LVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN--YNCR-----RGNLEEVASVI 302
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
L + ++N L+ + +EE+ N M + P + +YNIL+ C
Sbjct: 303 QHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKA 362
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
+ A + +M + D+ YNT++G K G ++ A E ++ +T+
Sbjct: 363 RLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITY 422
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR---- 401
+I+G K G + A+ +Y ML P+ T LI G C V EA ++++
Sbjct: 423 NSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSN 482
Query: 402 --NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
N +R +Y L+I+ LC+ ++E A+++ M G +PD IY A ++G +
Sbjct: 483 RGNGIRG-------STYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVE 535
Query: 460 KLG 462
++G
Sbjct: 536 EMG 538
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 36/263 (13%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P S ++L+ G R +++ + M G VP+ +YN+++ C +G +R A L
Sbjct: 137 PHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVL 196
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK----------------------- 331
E+M + G DV YNT+I + G E+A F+K
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 332 ------------EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+M + G + VT+ L+N C+ G+++ V + +L T
Sbjct: 257 YCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
L+ LC + E EI+ N M S+CP+ +Y +LI LC+ + A+ +M
Sbjct: 317 YNTLLHSLCSHEYWDEVEEIL-NIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQM 375
Query: 440 AGKGFEPDLKIYDAFIEGYKKLG 462
+ PD+ Y+ + K G
Sbjct: 376 LEQKCLPDIVTYNTVLGAMSKEG 398
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 147/331 (44%), Gaps = 22/331 (6%)
Query: 80 SNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCL---- 135
N A+RF+ L N C + +Y+ +V ++ R +A+ +++ V C
Sbjct: 223 GNAEQAIRFWKDQLQNG--CPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 136 -------FDCNNAPVKFFEMLLKTY--RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRML 186
++C ++ +++ + ++ L+ S + D EI+ ++
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 187 RSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMG 246
P + T N+LI+ + K + F ++ + + PD+ ++N ++
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML-------EQKCLPDIVTYNTVLGA 393
Query: 247 FYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLD 306
++G ++ E+ ++ C P L +YN ++ +G M++A +L+ +M G+ D
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 307 VTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYK 366
++I GF ++ +E+A + KE G T+ +I G CK +++ AI V +
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Query: 367 DMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
ML +P+ + +++G+ E SEA+
Sbjct: 514 IMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 1/220 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D + N+++ +G++ ++ M R VP+ S + L+ ++ +A +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
M + G D YN IIG K G I A ++M L G + +T+ +I
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G+ + AI +KD LQ P T +L+E +C + A+E++ + + + P +
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCY-PDIVT 281
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
Y L+ C G +EE + + G E + Y+ +
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 121/239 (50%), Gaps = 1/239 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D ++N+LMM F G E++ ME+ + + +Y +++ G++ A KL+
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
++M+ + LR + +++++ K+G+++ + + + EM+ G ++ F LI+ Y K
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G +D+A+ ++ +M + FRP M+IE + ++ A+ + ++ M F P+ +
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKD-MEKAGFLPTPST 455
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
Y L++ GQ++ A+K+ M G P L Y + + +A +++EM
Sbjct: 456 YSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 9/266 (3%)
Query: 197 TCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMI 256
T L+I +AK A + +F+++ + +LRP F+ L+ + G ++
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQM-------KERKLRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 257 EEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG 316
+V+ EM+ FG P+ + L+ + GK+ A +LW+EM+ G R + Y II
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIES 427
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
KSG++E A FK+ME G T+ L+ + G VDSA+ +Y M RP
Sbjct: 428 HAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG 487
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
S+ L+ L K+ V A +I+ M+ + + + ++L+ + +D ++ ALK
Sbjct: 488 LSSYISLLTLLANKRLVDVAGKILLE-MKAMGYSVDVCASDVLMIYI-KDASVDLALKWL 545
Query: 437 AKMAGKGFEPDLKIYDAFIEGYKKLG 462
M G + + I E K G
Sbjct: 546 RFMGSSGIKTNNFIIRQLFESCMKNG 571
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 149/324 (45%), Gaps = 8/324 (2%)
Query: 155 QCDSAPFVFDL--LIKSCLELKKIDGSIEIVRMLRSRGIS-PQIRTCNLLISCVAKCKGS 211
Q D FV ++ + +S +K++D ++ + R + + P +L + + +
Sbjct: 162 QLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDF 221
Query: 212 CAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPN 271
+F E+ ++D S L +++N ++ + ++E+ + + + GC +
Sbjct: 222 VGIQSLFEEM--VQDSSSHGDL--SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKID 277
Query: 272 LYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
+YN LM LF +G +A +++E M LD + Y II KSG+++ A + F+
Sbjct: 278 TQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQ 337
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
+M+ + + F L++ K G +D+++ VY +M RP A+ LI+ +
Sbjct: 338 QMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAG 397
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
++ AL + + M+ F P+ Y ++I+ + G++E A+ + M GF P Y
Sbjct: 398 KLDTALRLW-DEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 452 DAFIEGYKKLGNDQMAATLIMEMS 475
+E + G A + M+
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMT 480
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 305 LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV 364
L AYN +I K+ ++E A FK+ + G + ++ T+ +L+ + G A +
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI 300
Query: 365 YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLC 424
Y+ M + D + ST ++I L + R+ A ++ + M++ PS + L+ +
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQ-MKERKLRPSFSVFSSLVDSMG 359
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
+ G+++ ++K+ +M G G P ++ + I+ Y K G A L EM ++
Sbjct: 360 KAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKS 412
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 148/304 (48%), Gaps = 9/304 (2%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
K + +I++ ++ G SP + T N+++ K S +R+I G+ D L+
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS------WRKILGVLDEMRSKGLK 278
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
D + + ++ R+G + +E + E++ G P +YN L+ +F G EA +
Sbjct: 279 FDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV 338
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+EM D YN ++ + ++G ++A + M GV N++T+ +I+ Y K
Sbjct: 339 LKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGK 398
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
G D A+ ++ M + P T ++ L +K R +E ++++ + M+ P+R
Sbjct: 399 AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD-MKSNGCSPNRA 457
Query: 415 SYELLIKRLCEDGQMEEAL-KLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
++ ++ LC + M++ + ++ +M GFEPD ++ I Y + G++ A+ + E
Sbjct: 458 TWNTMLA-LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 474 MSRT 477
M+R
Sbjct: 517 MTRA 520
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 159/375 (42%), Gaps = 29/375 (7%)
Query: 100 LHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSA 159
L D+ +Y+TI+H SR +A+ + + + + +P L TY
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFER------MKEMGPSPT------LVTYN----- 249
Query: 160 PFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFR 219
+ D+ K +KI G ++ +RS+G+ TC+ ++S +CA G+ R
Sbjct: 250 -VILDVFGKMGRSWRKILG---VLDEMRSKGLKFDEFTCSTVLS-------ACAREGLLR 298
Query: 220 EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILM 279
E P ++N L+ F + G V EME C + +YN L+
Sbjct: 299 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 280 ALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE 339
A + G +EA + E M KG+ + Y T+I + K+G+ ++A + F M+ G
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
N+ T+ +++ K + I + DM P +T ++ LC K + + +
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNR 477
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
+ M+ F P R ++ LI G +A K+ +M GF + Y+A +
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 460 KLGNDQMAATLIMEM 474
+ G+ + +I +M
Sbjct: 538 RKGDWRSGENVISDM 552
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
L+ + + + + GS + + G P + N ++S + GI I
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI--RE 659
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
DG L PD+ ++N LM + R GE EE+ +E+ P+L SYN ++ FC
Sbjct: 660 DG-----LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRR 714
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
G M+EA ++ EM +G+R + YNT + G+ G + E+ + M N +TF
Sbjct: 715 GLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTF 774
Query: 346 EHLINGYCKVGDVDSAI 362
+ +++GYC+ G A+
Sbjct: 775 KMVVDGYCRAGKYSEAM 791
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+PD+ FN ++ F R+ + E + + G P+L +YN LM ++ G+ +AE+
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+ + + L+ D+ +YNT+I GF + G +++A EM G+ T+ ++GY
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+G V + M + D RP T M+++G C + SEA++ + + ++ C
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV-SKIKTFDPCFDD 806
Query: 414 KSYELLIKRLCED 426
+S + L R+ E+
Sbjct: 807 QSIQRLALRVREN 819
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 127/265 (47%), Gaps = 10/265 (3%)
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFN 241
++ ++S+G P + +L++ C AK GI R +++G ++ P
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCYAKGGNY---LGIERIENRIKEG----QIFPSWMLLR 600
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
L++ ++ + E + ++ G P++ +N ++++F +AE + E +R
Sbjct: 601 TLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED 660
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
GL D+ YN+++ + + G+ KAEE K +E ++ + V++ +I G+C+ G + A
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA 720
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
+ + +M ++ RP T + G +E ++I M P+ ++++++
Sbjct: 721 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIE-CMAKNDCRPNELTFKMVVD 779
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEP 446
C G+ EA+ +K+ K F+P
Sbjct: 780 GYCRAGKYSEAMDFVSKI--KTFDP 802
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 164/419 (39%), Gaps = 70/419 (16%)
Query: 99 CLHDLYSYSTIVHILSRARLKVQALSIIK---------SALVSRCLFDCNNAPVKFFEML 149
C D +Y+ +V RA +A +I+ +A+ + D K E L
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 150 LKTYRQCDSAPFVFDLLIKSCLEL-KKIDGSIEIVRML---RSRGISPQIRTCNLLISCV 205
Y ++ + L L K S E+++ML +S G SP T N +++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLAL- 465
Query: 206 AKCKGSCAGYG-------IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
C G +FRE+ PD +FN L+ + R G +
Sbjct: 466 ------CGNKGMDKFVNRVFREM-------KSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
++ EM R G + +YN L+ +G R E + +M+ KG + T+Y+ ++ +
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 319 KSGQ---IEKAEEFFKEMEL--------------------------------GGVESNSV 343
K G IE+ E KE ++ G + + V
Sbjct: 573 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 632
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
F +++ + + D A + + + + P+ T L++ + +A EI++
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK-T 691
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+ P SY +IK C G M+EA+++ ++M +G P + Y+ F+ GY +G
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 277 ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
I + + E + A KL +++ ++ LDV AY TI+ + ++G+ EKA + F+ M+
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAIL-VYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
G VT+ +++ + K+G IL V +M K + + T ++ + + E
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
A E ++ + P +Y L++ + G EAL + +M D Y+ +
Sbjct: 300 AKEFFAE-LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 456 EGYKKLGNDQMAATLIMEMSR 476
Y + G + AA +I M++
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTK 379
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 144/330 (43%), Gaps = 45/330 (13%)
Query: 181 EIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSF 240
E ++++ S + P I + +S + IF+EIF ++ L PD +
Sbjct: 359 EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIF-------ELGLLPDCVCY 411
Query: 241 NDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV 300
++ G+ G + + + + + G P+L + IL+ G + +AE ++ M+
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV---------------------E 339
+GL+LDV YN ++ G+ K+ Q+ K E EM G+ E
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 340 SN--------------SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
+N ++ F +I G+ K GD A +++ M +P+ T L+
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
G C+ +R+ +A+ ++ N + D P Y LI C G +E+A +L M +G
Sbjct: 592 GYCKAQRMEKAI-VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 446 PDLKIYDAFIEGY--KKLGNDQMAATLIME 473
P+ + A + G K+ N + A++++E
Sbjct: 651 PNESTHHALVLGLEGKRFVNSETHASMLLE 680
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 146/332 (43%), Gaps = 13/332 (3%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
+F E +L R ++A V L I+ D E++ ++ GI P I + I
Sbjct: 257 EFVEHMLSRGRHLNAA--VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
+ K G +E + + D S + ++ GF + G+ E E +
Sbjct: 315 KLCKA-------GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPE---EAIKLI 364
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
F PN++ Y+ ++ C G M A +++E+ GL D Y T+I G+ G+
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
+KA ++F + G + T LI + G + A V+++M + + + T L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
+ G + ++++ E+I + MR P +Y +LI + G ++EA ++ +++ +G
Sbjct: 485 MHGYGKTHQLNKVFELI-DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG 543
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
F P + I G+ K G+ Q A L M+
Sbjct: 544 FVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 13/233 (5%)
Query: 165 LLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG---IFREI 221
+LI +C I + + R +++ G+ + T N L+ GYG ++
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH----------GYGKTHQLNKV 497
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
F L D + PDV ++N L+ G ++ E+ +E+ R G VP+ ++ ++
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
F G +EA LW M ++ DV + ++ G+ K+ ++EKA F ++ G++ +
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
V + LI+GYC VGD++ A + M+Q+ P ST L+ GL K+ V+
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVN 670
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/406 (18%), Positives = 151/406 (37%), Gaps = 77/406 (18%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP 160
H S S ++HIL + +A+ ++ LV +C + + + L +T
Sbjct: 144 HSSRSISRMIHILVSGNMNYRAVDMLL-CLVKKCSGE-ERSLCLVMKDLFETRIDRRVLE 201
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
VF +LI C+ +K++ ++++ + GI P C L+ + + G
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHG---------- 251
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+E+ E M G N ++ +
Sbjct: 252 --------------------------------LELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
+C +G + +L M+ G+R D+ A+ I K+G +++A +++L G+
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 341 NSVTFEHLINGYCKVGDVDSAI--------------------------------LVYKDM 368
+SV+ +I+G+CKVG + AI +++++
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEI 399
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
+ P+ +I+G C R +A + A+ PS + +LI G
Sbjct: 400 FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF-GALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ +A + M +G + D+ Y+ + GY K LI EM
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM 504
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 150/327 (45%), Gaps = 30/327 (9%)
Query: 137 DCNNAPVKFFEMLLKTYRQC---------------DSAPFV---FDLLIKSCLELKKIDG 178
+C V + +L+K + +C D P F+LLI SC E
Sbjct: 143 ECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQ 202
Query: 179 SIEIVRMLRSRGIS--PQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPD 236
++ V+ ++S+ + P + N +++ + K +++++ L DG S PD
Sbjct: 203 AV--VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM--LEDGFS-----PD 253
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
V ++N L+ YR G+M+ + +++EM R G P+ Y+YNIL+ + K A
Sbjct: 254 VLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLN 313
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
M+ G+ V Y T+I G ++G +E + F EM G + V + +I GY G
Sbjct: 314 HMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSG 373
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
++D A ++++M K P T +I GLC EA +++ M P+ Y
Sbjct: 374 ELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE-MESRGCNPNFVVY 432
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKG 443
L+ L + G++ EA K+ +M KG
Sbjct: 433 STLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 3/244 (1%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE-GKMREA 291
R V+S++ LM F GE + + + +EM + G ++N+L+ CGE G ++A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICS-CGEAGLAKQA 203
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+ + + R +YN I+ Q + E +K+M G + +T+ L+
Sbjct: 204 VVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT 263
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
++G +D ++ +M + F P++ T +L+ L + + AL + N M++V P
Sbjct: 264 NYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTL-NHMKEVGIDP 322
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
S Y LI L G +E +M G PD+ Y I GY G A +
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 472 MEMS 475
EM+
Sbjct: 383 REMT 386
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 138/304 (45%), Gaps = 9/304 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
++ LIK ID + + R +R GI P + T N LIS AK +
Sbjct: 49 ITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNL-------MLNR 101
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM-EMIEEVWNEMERFGCVPNLYSYNILM 279
+ L D L PD+ S+N LM +++ G E + + ++ G VP + +YNIL+
Sbjct: 102 VLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILL 161
Query: 280 ALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE 339
C G A +L++ ++ + ++ ++ YN +I G KS ++ + +E++ G
Sbjct: 162 DALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT 220
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
N+VT+ ++ Y K ++ + ++ M ++ + + ++ L + R EA E
Sbjct: 221 PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYEC 280
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
+ +R + SY L+ +DG ++ L ++ KG +PD + + G
Sbjct: 281 MHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLL 340
Query: 460 KLGN 463
+GN
Sbjct: 341 NIGN 344
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 124/244 (50%), Gaps = 3/244 (1%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PDV ++N L+ G+ R ++ V M G P++ +YN L++ + +L
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE-MELGGVESNSVTFEHLINGYC 353
++EM GL D+ +YNT++ ++K G+ +A + E + L G+ T+ L++ C
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K G D+AI ++K L+ +PE T +LI GLC+ +RV ++R ++ + P+
Sbjct: 166 KSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRE-LKKSGYTPNA 223
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+Y ++K + ++E+ L+L KM +G+ D A + K G + A + E
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHE 283
Query: 474 MSRT 477
+ R+
Sbjct: 284 LVRS 287
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 147/307 (47%), Gaps = 14/307 (4%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+++L+ + + D +IE+ + L+SR + P++ T N+LI+ + K + + + RE+
Sbjct: 156 TYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
K P+ ++ ++ +++ +E +++ +M++ G + ++ +++
Sbjct: 215 -------KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSA 267
Query: 282 FCGEGKMREAEKLWEEMRVKGLR-LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
G+ EA + E+ G R D+ +YNT++ ++K G ++ ++ +E+E+ G++
Sbjct: 268 LIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP 327
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ T ++NG +G+ A + + +P T LI+GLC+ V A+ +
Sbjct: 328 DDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ F +Y ++ LC+DG++ A KL KG + A + G ++
Sbjct: 388 ASMEVRDEF-----TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRE 442
Query: 461 LGNDQMA 467
+ Q A
Sbjct: 443 TVSYQAA 449
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 287 KMREAEKLWEEMRVKGLRL----DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
K R E+ E + + G+RL DV YNT+I G+ + I++A + M G+E +
Sbjct: 25 KFRNLER-AETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDV 83
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
T+ LI+G K ++ + ++ +ML P+ + L+ + R EA +I+
Sbjct: 84 TTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE 143
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ P +Y +L+ LC+ G + A++L + + +P+L Y+ I G
Sbjct: 144 DIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILING 197
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 9/245 (3%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PDV + N L+ + + +V++EM G + YS IL+ C EGK+ KL
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
E KG ++ YNTIIGG+ K G IE A FKE++L G TF +ING+CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE----IIRNAMRDVSFC 410
GD ++ + ++ ++ R + +I+ + E II N +
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK----- 342
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
P +Y +LI RLC++G+ E A+ + + KG P+ Y I+ Y K +A+ L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 471 IMEMS 475
+++M+
Sbjct: 403 LLQMA 407
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 155/376 (41%), Gaps = 41/376 (10%)
Query: 138 CNNAPVKFFEMLL--KTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQI 195
CN V+ L+ + + C ++ +I +L I+ + + + L+ +G P +
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTL 275
Query: 196 RTCNLLISCVAKCKGSCAGYGIFREI--FGLRDG--------DSKVR------------- 232
T +I+ K A + E+ GLR D+K R
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335
Query: 233 -----LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGK 287
+PDV ++N L+ ++G+ E+ +E + G +PN SY L+ +C +
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 288 MREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
A KL +M +G + D+ Y +I G SG ++ A ++ GV ++ +
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA-----LEIIRN 402
L++G CK G A L++ +ML ++ P+A LI+G EA L + +
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
DV + +IK C G ++EAL +M + PD Y I+GY K
Sbjct: 516 VKVDVV------HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 463 NDQMAATLIMEMSRTQ 478
+ A + M + +
Sbjct: 570 DMATAIKIFRYMEKNK 585
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 9/300 (3%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
K+D + E + + + P + T N+LI+ + K G G D SK L
Sbjct: 326 KVDPA-ESIGWIIANDCKPDVATYNILINRLCK-------EGKKEVAVGFLDEASKKGLI 377
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+ S+ L+ + + E ++ ++ +M GC P++ +Y IL+ G M +A +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
++ +G+ D YN ++ G K+G+ A+ F EM + ++ + LI+G+ +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
GD D A V+ ++K + + +I+G C + EAL + N M + P +
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACM-NRMNEEHLVPDKF 556
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+Y +I + M A+K+ M +P++ Y + I G+ G+ +MA EM
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 137/361 (37%), Gaps = 56/361 (15%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
R C + +LI + +D ++ + L RG+SP N+L+S + K
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
+F E+ + PD + + L+ GF R G+ + +V++ G ++
Sbjct: 469 AKLLFSEMLDRN-------ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
+N ++ FC G + EA M + L D Y+TII G+ K + A + F+ M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
E + N VT+ LING+C GD A +K+M +D P T LI L ++
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKR------------------------------- 422
E M P+ ++ L++
Sbjct: 642 LEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRM 701
Query: 423 ------------------LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGND 464
LC G ++ A Q KM KGF PD + A + G+ +GN
Sbjct: 702 KSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNS 761
Query: 465 Q 465
+
Sbjct: 762 K 762
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 25/304 (8%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
LI++ + K+ D + +++ + RG P I T +LI +G+ + G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI------------HGLV--VSGHM 431
Query: 226 DG--DSKVRL-----RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
D + KV+L PD +N LM G + G + +++EM +P+ Y Y L
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ F G EA K++ KG+++DV +N +I GF +SG +++A M +
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
+ T+ +I+GY K D+ +AI +++ M + +P T LI G C + A E
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 399 IIRN-AMRDVSFCPSRKSYELLIKRLC-EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
+ +RD+ P+ +Y LI+ L E +E+A+ M P+ ++ ++
Sbjct: 612 TFKEMQLRDL--VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 457 GYKK 460
G+ K
Sbjct: 670 GFVK 673
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSR-GISPQIRTC 198
NA F EM R C F+ L+ +C+ KK D I + L + I P + +
Sbjct: 124 NAQKVFDEM---PERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASY 180
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N LI KG C G G F E L D L+PD +FN L+ Y G+ E E+
Sbjct: 181 NTLI------KGLC-GKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
+W M ++ SYN + E K E L+++++ L+ DV + +I GF
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
G++++A ++KE+E G F L+ CK GD++SA + K++ K + +
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 379 TIGMLIEGLCEKKRVSEALEII 400
+ +++ L + + EA EI+
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIV 375
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 18/235 (7%)
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNI---LMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
+ E +EE+ E ++ PN+ ++ L+ G A+K+++EM + +
Sbjct: 86 KFEWVEEILEEQNKY---PNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTAL 142
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELG-GVESNSVTFEHLINGYCKVGDVDSAILVYKD 367
++N ++ S + + E FKE+ +E + ++ LI G C G A+ + +
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEII-----RNAMRDVSFCPSRKSYELLIKR 422
+ K +P+ T +L+ K + E +I +N RD+ +SY +
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI------RSYNARLLG 256
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
L + + EE + L K+ G +PD+ + A I+G+ G A T E+ +
Sbjct: 257 LAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 105/229 (45%), Gaps = 2/229 (0%)
Query: 247 FYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK-GLRL 305
+ R G E ++V++EM C S+N L+ K E +++E+ K +
Sbjct: 116 YGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP 175
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
DV +YNT+I G G +A E+E G++ + +TF L++ G + ++
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
M++K+ + + + + GL + + E + + + ++ P ++ +IK
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLF-DKLKGNELKPDVFTFTAMIKGFVS 294
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+G+++EA+ ++ G P ++++ + K G+ + A L E+
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
EK + + + R ++ Y + + + E EE +E S +IN
Sbjct: 56 EKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINL 115
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
Y +VG ++A V+ +M +++ + A + L+ K+ I + +S P
Sbjct: 116 YGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP 175
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI-EGYKK 460
SY LIK LC G EA+ L ++ KG +PD ++ + E Y K
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTK 225
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
++N L+ G + G + +++ +E G VP+ +Y IL+ C EG +AEKL + M
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
KGL ++ YN+I+ G+ K GQ E A +G V ++ T +I GYCK GD+
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP--SRKSY 416
+ A+ V+ + K+ + LI+G C K R+ EA ++R + S +R
Sbjct: 812 EEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDA 871
Query: 417 EL--------LIKRLCEDGQMEEALKL 435
EL + LCE G++ +A+K+
Sbjct: 872 ELAESESIRGFLVELCEQGRVPQAIKI 898
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
VPNL +Y L++ C GK+ E L + +G D Y+ I G++K G + A
Sbjct: 204 VPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALM 263
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
+EM G+ + V++ LI+G K G+V+ A+ + M+++ P T +I GLC
Sbjct: 264 QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ ++ EA ++ N + V Y LI +C G + A + M +G +P +
Sbjct: 324 KMGKLEEAF-VLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSI 382
Query: 449 KIYDAFIEG 457
Y+ I G
Sbjct: 383 LTYNTVING 391
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 16/247 (6%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
DV S++ L+ G ++G +E + +M + G PNL +Y ++ C GK+ EA L+
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+ G+ +D Y T+I G + G + +A +ME G++ + +T+ +ING C
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR-----DVSFC 410
G V A D + K + T L++ + + + LEI R + D+ C
Sbjct: 396 GRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
+L+K G EA L M PD Y I+GY K G + A +
Sbjct: 451 ------NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 471 IMEMSRT 477
E+ ++
Sbjct: 505 FNELRKS 511
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 149/364 (40%), Gaps = 44/364 (12%)
Query: 146 FEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCV 205
EM + + SA ++ +I + + +D + E++ L +G+ I T L+ +
Sbjct: 502 LEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSI 561
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
G GI ++GL +S V L ND ++ + G E EV+ M R
Sbjct: 562 HANGGD---KGILGLVYGLEQLNSDVCL----GMLNDAILLLCKRGSFEAAIEVYMIMRR 614
Query: 266 FGC------------VPNLYS----------------------YNILMALFCGEGKMREA 291
G V NL S Y I++ C EG + +A
Sbjct: 615 KGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKA 674
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
L + +G+ L+ YN++I G + G + +A F +E G+ + VT+ LI+
Sbjct: 675 LNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDN 734
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII-RNAMRDVSFC 410
CK G A + M+ K P +++G C+ + +A+ ++ R M V+
Sbjct: 735 LCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVT-- 792
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
P + +IK C+ G MEEAL + + K D + I+G+ G + A L
Sbjct: 793 PDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGL 852
Query: 471 IMEM 474
+ EM
Sbjct: 853 LREM 856
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 16/252 (6%)
Query: 229 SKVRLRPDVHSFNDLMMGF--YRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG 286
SK + P H + L+ GF RD + + + + + G P+ ++ L+ F +G
Sbjct: 89 SKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKG 148
Query: 287 KMREAEKLWEEMRVKGLR--LDVTAYNTIIGGFYKSGQIEKAEEFFKE-MELGGVESNSV 343
+M A ++ E M K + D + +I GF K G+ E A FF+ ++ G + N V
Sbjct: 149 EMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLV 208
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL----EI 399
T+ L++ C++G VD + + + + F + I G + + +AL E+
Sbjct: 209 TYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREM 268
Query: 400 IRNAM-RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+ M RDV SY +LI L ++G +EEAL L KM +G EP+L Y A I G
Sbjct: 269 VEKGMNRDVV------SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 459 KKLGNDQMAATL 470
K+G + A L
Sbjct: 323 CKMGKLEEAFVL 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 121/285 (42%), Gaps = 16/285 (5%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F++ LI ++ + ++ + RGI P I T N +I+ + + +
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKG 407
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ G DV +++ L+ + + ++ + E+ +L NIL+
Sbjct: 408 VVG------------DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLK 455
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
F G EA+ L+ M L D Y T+I G+ K+GQIE+A E F E+ V S
Sbjct: 456 AFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV-S 514
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+V + +I+ CK G +D+A V ++ +K + T L+ + L ++
Sbjct: 515 AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLV 574
Query: 401 RNAMR-DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+ + C + +L+ LC+ G E A+++ M KG
Sbjct: 575 YGLEQLNSDVCLGMLNDAILL--LCKRGSFEAAIEVYMIMRRKGL 617
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 137/285 (48%), Gaps = 9/285 (3%)
Query: 193 PQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGE 252
P T N+LI C+ G F + L D K +++P +F L+ G +D
Sbjct: 150 PDACTYNILIH-------GCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSR 202
Query: 253 MEMIEEVWNEMER-FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
++ ++ ++M + +G P ++ Y L+ C G++ A KL +E +++D Y+
Sbjct: 203 VKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYS 262
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
T+I K+G+ + +EM G + ++VT+ LING+C D +SA V +M++K
Sbjct: 263 TLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK 322
Query: 372 DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEE 431
+P+ + M++ K+ EA + + R P SY ++ LCE Q EE
Sbjct: 323 GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR-GCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 432 ALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
A + +M KG++P + F++ + G ++ + +I + R
Sbjct: 382 AAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR 426
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 144/299 (48%), Gaps = 12/299 (4%)
Query: 138 CNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVR-MLRSRGISPQIR 196
C + +K F+ ++K ++ F LI + ++ ++++ ML+ G+ P +
Sbjct: 167 CFDDALKLFDEMVK--KKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVH 224
Query: 197 TCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMI 256
LI + + G F L+D + +++ D ++ L+ + G +
Sbjct: 225 IYASLIKALCQ-------IGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 257 EEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG 316
+ EM GC P+ +YN+L+ FC E A ++ +EM KGL+ DV +YN I+G
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
F++ + E+A F++M G +++++ + +G C+ + A ++ +ML K ++P
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR 397
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
+ ++ LCE ++ ++I + R ++ + ++I +C++ + +++ L
Sbjct: 398 RDRLEGFLQKLCESGKLEILSKVISSLHRGIA--GDADVWSVMIPTMCKEPVISDSIDL 454
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 2/195 (1%)
Query: 282 FCGEGKM-REAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
F G GK+ A +++EM + V + N+++ K G++EK +E ++ G +
Sbjct: 92 FFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KP 150
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
++ T+ LI+G + G D A+ ++ +M++K +P T G LI GLC+ RV EAL++
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ ++ P+ Y LIK LC+ G++ A KL+ + + D IY I K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 461 LGNDQMAATLIMEMS 475
G + ++ EMS
Sbjct: 271 AGRSNEVSMILEEMS 285
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 111/227 (48%), Gaps = 3/227 (1%)
Query: 251 GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
GE+E ++E + ++ FG P+ +YNIL+ G +A KL++EM K ++ +
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 311 NTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
T+I G K ++++A + +M ++ GV + LI C++G++ A + +
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQM 429
+ + +A+ LI L + R +E + +I M + P +Y +LI C +
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNE-VSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
E A ++ +M KG +PD+ Y+ + + ++ + A L +M R
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR 356
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 167 IKSCL-ELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
I SCL + K+D I++ ++ G+ P + T N L++ K K GY E+ G
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKN---GYPKAIELIGEL 228
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
+ ++ D + ++ +G E E +M+ G PN+Y Y+ L+ + +
Sbjct: 229 PHNG---IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWK 285
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
G ++A++L EM+ GL + T++ + K G +++ E E+E G N + +
Sbjct: 286 GDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
L++G K G ++ A ++ DM K R + ++I LC KR EA E+ R++
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSET 405
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
C +L C G+ME +++ KM + PD + I+ + K
Sbjct: 406 TYEKCDLVMLNTMLCA-YCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 113/237 (47%), Gaps = 9/237 (3%)
Query: 155 QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAG 214
Q DS ++ ++ C + + + ++ ++ G SP I + L++ S +
Sbjct: 234 QMDSV--MYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLN-------SYSW 284
Query: 215 YGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYS 274
G +++ L + L P+ L+ + + G + E+ +E+E G N
Sbjct: 285 KGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMP 344
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
Y +LM GK+ EA ++++M+ KG+R D A + +I +S + ++A+E ++ E
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
+ + V ++ YC+ G+++S + + K M ++ P+ +T +LI+ ++K
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 43/233 (18%)
Query: 257 EEVWNEMERFGCVP------NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
+ V +E + +P N+Y N +++ GK+ KL+++M+ GL+ DV Y
Sbjct: 145 KNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTY 204
Query: 311 NTIIGGFYK------------------------------------SGQIEKAEEFFKEME 334
NT++ G K +G+ E+AE F ++M+
Sbjct: 205 NTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMK 264
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
+ G N + L+N Y GD A + +M P + L++ +
Sbjct: 265 VEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFD 324
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+ E++ + + + + Y +L+ L + G++EEA + M GKG D
Sbjct: 325 RSRELL-SELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
V N ++ F G + + +++ M++ G + ++ +Y+ + F G + +A ++++
Sbjct: 98 VQDLNVILRDFGISGRWQDLIQLFEWMQQHGKI-SVSTYSSCIK-FVGAKNVSKALEIYQ 155
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
+ + +++V N+I+ K+G+++ + F +M+ G++ + VT+ L+ G KV
Sbjct: 156 SIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVK 215
Query: 357 D-VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
+ AI + ++ + ++ G ++ +C SE E M+ P+
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVL-AICASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
Y L+ G ++A +L +M G P+ + ++ Y K G
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGG 321
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 162/376 (43%), Gaps = 30/376 (7%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP 160
HD SYS++++ L+++R FD + ++ L YR
Sbjct: 79 HDYPSYSSLIYKLAKSRN-----------------FDAVDQILR-----LVRYRNVRCRE 116
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+F LI+ + +D +I++ + S I++ N LI+ + G +
Sbjct: 117 SLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVD-------NGELEK 169
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
DG +RLRP+ SFN L+ GF + E +V++EM P++ +YN L+
Sbjct: 170 AKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG 229
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C M +A+ L E+M K +R + + ++ G G+ +A++ +ME G +
Sbjct: 230 FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKP 289
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
V + L++ K G +D A L+ +M ++ +P+ +L+ LC + RV EA ++
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVL 349
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
M+ P+ +Y ++I C + L + M P + + G K
Sbjct: 350 -TEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIK 408
Query: 461 LGNDQMAATLIMEMSR 476
GN A ++ M +
Sbjct: 409 GGNLDHACFVLEVMGK 424
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 131/269 (48%), Gaps = 15/269 (5%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F++LIK L+ + + ++ + + P + T N LI + + + ++
Sbjct: 189 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMI 248
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
K R+RP+ +F LM G GE +++ +ME GC P L +Y ILM+
Sbjct: 249 -------KKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
G++ EA+ L EM+ + ++ DV YN ++ ++ +A EM++ G + N+
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA---LEI 399
T+ +I+G+C++ D DS + V ML P +T ++ GL + + A LE+
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEV 421
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLC-EDG 427
+ +++SF +++ L+ LC +DG
Sbjct: 422 M--GKKNLSF--GSGAWQNLLSDLCIKDG 446
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 252 EMEMIEE---VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
E+E EE ++++ + G + SY+ L+ +++ +R + +R +
Sbjct: 58 EIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRES 117
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEM-----------------------ELGGVES----- 340
+ +I + K+G ++KA + F ++ EL +S
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 341 -------NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
NSV+F LI G+ D ++A V+ +ML+ + +P T LI LC +
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
+A ++ + ++ P+ ++ LL+K LC G+ EA KL M +G +P L Y
Sbjct: 238 GKAKSLLEDMIKK-RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 454 FIEGYKKLGNDQMAATLIMEMSRTQ 478
+ K G A L+ EM + +
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRR 321
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D H++ ++ R + I ++ +EM R GC PN +YN L+ + + EA ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+M+ G + D Y T+I K+G ++ A + ++ M+ GG+ ++ T+ +IN K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G + +A ++ +M+ + P T ++++ + + AL++ R+ M++ F P + +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD-MQNAGFEPDKVT 541
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
Y ++++ L G +EEA + +M K + PD +Y ++ + K GN + A M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 150/341 (43%), Gaps = 33/341 (9%)
Query: 89 FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEM 148
FF+ L HD ++Y+T+V L RA+ Q +I K L D EM
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAK---QFGAINK-------LLD---------EM 390
Query: 149 LLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
+ C ++ LI S ++ ++ + ++ G P T LI AK
Sbjct: 391 VRDG---CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAK- 446
Query: 209 KGSCAGY-GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG 267
AG+ I +++ L PD +++ ++ + G + +++ EM G
Sbjct: 447 ----AGFLDIAMDMYQRMQAGG---LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
C PNL +YNI+M L + A KL+ +M+ G D Y+ ++ G +E+AE
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
F EM+ + + L++ + K G+V+ A Y+ ML RP T L+
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
+++EA E+++N M + PS ++Y LL+ C DG+
Sbjct: 620 LRVNKIAEAYELLQN-MLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
R G + D Y T++G ++ Q + EM G + N+VT+ LI+ Y + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
+ A+ V+ M + +P+ T LI+ + + A+++ + M+ P +Y +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR-MQAGGLSPDTFTYSV 474
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+I L + G + A KL +M +G P+L Y+ ++ + K N Q A L +M
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D H++ ++ R + I ++ +EM R GC PN +YN L+ + + EA ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+M+ G + D Y T+I K+G ++ A + ++ M+ GG+ ++ T+ +IN K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G + +A ++ +M+ + P T ++++ + + AL++ R+ M++ F P + +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD-MQNAGFEPDKVT 541
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
Y ++++ L G +EEA + +M K + PD +Y ++ + K GN + A M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 150/341 (43%), Gaps = 33/341 (9%)
Query: 89 FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEM 148
FF+ L HD ++Y+T+V L RA+ Q +I K L D EM
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAK---QFGAINK-------LLD---------EM 390
Query: 149 LLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
+ C ++ LI S ++ ++ + ++ G P T LI AK
Sbjct: 391 VRDG---CQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAK- 446
Query: 209 KGSCAGY-GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG 267
AG+ I +++ L PD +++ ++ + G + +++ EM G
Sbjct: 447 ----AGFLDIAMDMYQRMQAGG---LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
C PNL +YNI+M L + A KL+ +M+ G D Y+ ++ G +E+AE
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
F EM+ + + L++ + K G+V+ A Y+ ML RP T L+
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
+++EA E+++N M + PS ++Y LL+ C DG+
Sbjct: 620 LRVNKIAEAYELLQN-MLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
R G + D Y T++G ++ Q + EM G + N+VT+ LI+ Y + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
+ A+ V+ M + +P+ T LI+ + + A+++ + M+ P +Y +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR-MQAGGLSPDTFTYSV 474
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+I L + G + A KL +M +G P+L Y+ ++ + K N Q A L +M
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 186/438 (42%), Gaps = 80/438 (18%)
Query: 85 ALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRC-LFDCNNAPV 143
AL+FF +T + S L HD ++ ++ +L +V L+ +RC L D V
Sbjct: 133 ALQFFRWT-ERSGLIRHDRDTHMKMIKMLG----EVSKLN------HARCILLDMPEKGV 181
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
+ E + F +LI+S + + S++I + ++ G+ I++ N L
Sbjct: 182 PWDEDM-------------FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFK 228
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
+ + F ++ + +G + P H++N ++ GF+ +E + +M
Sbjct: 229 VILRRGRYMMAKRYFNKM--VSEG-----VEPTRHTYNLMLWGFFLSLRLETALRFFEDM 281
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
+ G P+ ++N ++ FC KM EAEKL+ EM+ + V +Y T+I G+ ++
Sbjct: 282 KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP-------- 375
+ F+EM G+E N+ T+ L+ G C G + A + K+M+ K P
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLK 401
Query: 376 ----------------------------EASTIGMLIEGLCEKKRVSEAL---------E 398
EA G+LIE C+ + A+ E
Sbjct: 402 LLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKE 461
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
II + PS +Y +I+ LC +GQ +A L ++ +G + D + I G+
Sbjct: 462 IILRHQDTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGH 518
Query: 459 KKLGNDQMAATLIMEMSR 476
K GN + ++ MSR
Sbjct: 519 AKEGNPDSSYEILKIMSR 536
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 142/342 (41%), Gaps = 49/342 (14%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
+++ ++ +++RGISP T N +I+ + K +F E+ G + G
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIG------- 322
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P V S+ ++ G+ ++ ++ EM G PN +Y+ L+ C GKM EA+ +
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 295 WEEMRVKGLR-LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+ M K + D + + ++ K+G + A E K M V + + + LI C
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 354 KVGDVDSAI-----LVYKDML---QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
K + AI L+ K+++ Q E S +IE LC + ++A + R M+
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMK 502
Query: 406 ----------------------DVSF----CPSRK-------SYELLIKRLCEDGQMEEA 432
D S+ SR+ +YELLIK G+ +A
Sbjct: 503 RGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDA 562
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
M G PD ++ + IE + G Q A+ ++M M
Sbjct: 563 KTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIM 604
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 113/206 (54%), Gaps = 2/206 (0%)
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
++M++E+ +EME+ GC ++ ++ IL++++ K+ + ++E+MR G LD TAYN
Sbjct: 205 LDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNI 264
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I +G+ + A EF+KEM G+ T++ L++ K VD + DM++
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
E G L++ C ++ EALE+IR +++ C K +E+L+K LC +M +A
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRE-LKNKEMCLDAKYFEILVKGLCRANRMVDA 383
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGY 458
L++ M + + D +Y I GY
Sbjct: 384 LEIVDIMKRRKLD-DSNVYGIIISGY 408
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 179/409 (43%), Gaps = 47/409 (11%)
Query: 82 PHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNA 141
PHLA+RFF + H + Y+T++ I AR L ++ LVS + +
Sbjct: 169 PHLAMRFFNWVKQKDGFS-HRVGIYNTMLSIAGEAR----NLDMV-DELVSEMEKNGCDK 222
Query: 142 PVKFFEMLLKTY---RQCDSAPFVFDLLIKSCLELKKI---------------DGSIEIV 183
++ + +L+ Y ++ VF+ + KS EL D ++E
Sbjct: 223 DIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFY 282
Query: 184 RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL--RPDVHSFN 241
+ + +GI+ +RT +L+ C+AK + I D VR+ + +F
Sbjct: 283 KEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSI---------ADDMVRICEISEHDAFG 333
Query: 242 DLMMGFYRDGE----MEMIEEVWN-EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
L+ F G+ +E+I E+ N EM C+ Y + IL+ C +M +A ++ +
Sbjct: 334 YLLKSFCVSGKIKEALELIRELKNKEM----CLDAKY-FEILVKGLCRANRMVDALEIVD 388
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
M+ + L D Y II G+ + + KA E F+ ++ G T+ ++ K+
Sbjct: 389 IMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLK 447
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+ ++ +M++ P++ I ++ G + RV+EA ++ ++M + P+ KSY
Sbjct: 448 QFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF-SSMEEKGIKPTWKSY 506
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
+ +K LC + +E +K+ +M I+ I +K G +
Sbjct: 507 SIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKE 555
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 123/301 (40%), Gaps = 15/301 (4%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA--GYGIFREIFGLRDGDSKVRLRPD 236
+I + ++ G+ P T LI+ + + KG FRE+ +R G PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREM--IRSG-----FVPD 784
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
D + G + + + + + G P +Y+I + C GK+ EA L E
Sbjct: 785 RELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEA--LSE 841
Query: 297 EMRVKGLR--LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+G R LD Y +I+ G + G ++KA + M+ G + + LI + K
Sbjct: 842 LASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFK 901
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
++ + + M + P T +I G +V EA RN M + P K
Sbjct: 902 EKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRN-MEERGTSPDFK 960
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+Y I LC+ + E+ALKL ++M KG P + G + G +A + +
Sbjct: 961 TYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKK 1020
Query: 475 S 475
S
Sbjct: 1021 S 1021
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 6/235 (2%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR---EAEKLWEEMR 299
++M + R G + + EM+ G +P+ ++ L+ + C E K R EA + + EM
Sbjct: 719 MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC-EKKGRNVEEATRTFREMI 777
Query: 300 VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVD 359
G D +G + G + A+ + G +V + I C++G ++
Sbjct: 778 RSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV-TVAYSIYIRALCRIGKLE 836
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
A+ + + T G ++ GL ++ + +AL+ + N+M+++ P Y L
Sbjct: 837 EALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKV-NSMKEIGTKPGVHVYTSL 895
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
I ++ Q+E+ L+ KM G+ EP + Y A I GY LG + A M
Sbjct: 896 IVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM 950
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 264 ERFGCVPNLYSYNILMALF-CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
+R G N +YN+ + + CG+ ++ L+ EMR +G + + +I + ++G
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGK-DFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGL 728
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYC--KVGDVDSAILVYKDMLQKDFRPEASTI 380
A FKEM+ G+ +S TF+ LI C K +V+ A +++M++ F P+ +
Sbjct: 729 TNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELV 788
Query: 381 GMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMA 440
+ LCE +A + +++ + F P +Y + I+ LC G++EEAL A
Sbjct: 789 QDYLGCLCEVGNTKDAKSCL-DSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFE 846
Query: 441 GKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
G+ D Y + + G + G+ Q A + M
Sbjct: 847 GERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSM 880
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 256 IEEVWNEMERFGCVPNL---YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+EE +E+ F +L Y+Y ++ G +++A M+ G + V Y +
Sbjct: 835 LEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTS 894
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I F+K Q+EK E ++ME E + VT+ +I GY +G V+ A +++M ++
Sbjct: 895 LIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERG 954
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
P+ T I LC+ + +AL+++ + M D PS ++ + L +G+ + A
Sbjct: 955 TSPDFKTYSKFINCLCQACKSEDALKLL-SEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Query: 433 -LKLQAKMA 440
+ LQ K A
Sbjct: 1014 RIALQKKSA 1022
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 127/252 (50%), Gaps = 13/252 (5%)
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV------P 270
+F ++ G++ R + D S+N + GF G+++ ++ EM+ V P
Sbjct: 234 VFEKLKGMK------RFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGP 287
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
++ +YN L+ + C GK ++A +W+E++V G D + Y +I G KS +++ A +
Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY 347
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
EM+ G +++ + L++G K V A +++ M+Q+ R T +LI+GL
Sbjct: 348 GEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRN 407
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
R + + + F + ++ ++ +LC +G++E A+KL +M +GF DL
Sbjct: 408 GRAEAGFTLFCDLKKKGQFVDA-ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 451 YDAFIEGYKKLG 462
+ + G+ K G
Sbjct: 467 ISSLLIGFHKQG 478
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
D+ +Y++++H+L CLF + ++ L + + D++
Sbjct: 288 DICTYNSLIHVL--------------------CLFGKAKDALIVWDELKVSGHEPDNS-- 325
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ +LI+ C + ++D ++ I ++ G P N L+ K + +F ++
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+++G +R ++N L+ G +R+G E ++ ++++ G + +++I+
Sbjct: 386 --VQEG-----VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQ 438
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C EGK+ A KL EEM +G +D+ ++++ GF+K G+ + E+ K + G + N
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD ++ L+ G + M+ ++ EM+ G VP+ YN L+ K+ EA +L
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+E+M +G+R YN +I G +++G+ E F +++ G +++TF + C+
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
G ++ A+ + ++M + F + TI L+ G ++ R +++++ +R+ + P+
Sbjct: 442 EGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH-IREGNLVPN 498
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 238 HSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
+++N +M F + G + V ++M C ++ +YN+++ G+ A + +
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
+ +G LD+ YNT+I K+ ++++A + F M+ G+ + V++ +I K G
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 358 VDSAILVYKDMLQKDFRPEASTIGML--IEGLCEKKRVSEALEIIRN 402
+ A K ML P T +L + EK R +A +RN
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKARFKKA-SFVRN 796
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 307 VTAYNTIIGGFYKSGQIEKAEEFFKEME-LGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
A N ++ G ++ + + F++++ + + ++ ++ I+G+ GD+D+A+ ++
Sbjct: 212 TVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLF 271
Query: 366 KDMLQKD------FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
K+M ++ F P+ T LI LC + +AL I+ + ++ P +Y +L
Sbjct: 272 KEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL-IVWDELKVSGHEPDNSTYRIL 330
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
I+ C+ +M++A+++ +M GF PD +Y+ ++G K
Sbjct: 331 IQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLK 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 66/129 (51%)
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G F+ G+ D + D+ ++N ++ G + G ++ V + + + G ++ Y
Sbjct: 644 GYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMY 703
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
N L+ ++ EA +L++ M+ G+ DV +YNT+I K+G++++A ++ K M
Sbjct: 704 NTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 336 GGVESNSVT 344
G N VT
Sbjct: 764 AGCLPNHVT 772
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
+IE++ + +G+ N + S + K K + +F ++ +DG S PD+
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM--KKDGPS-----PDIF 478
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
++N L+ F R GE++ ++ E+ER C P++ SYN L+ G + EA ++EM
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
+ KGL DV Y+T++ F K+ ++E A F+EM + G + N VT+ L++ K G
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT 598
Query: 359 DSAILVYKDMLQKDFRPEASTIGML 383
A+ +Y M Q+ P++ T +L
Sbjct: 599 AEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 164/351 (46%), Gaps = 35/351 (9%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
++ Y+T++ +L++ ++ +A+ + + + C P ++ LL
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGC------RPNEYTYSLL----------- 346
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+LL+ +L ++DG +EI + ++GI + L+ ++K + +F ++
Sbjct: 347 -LNLLVAEG-QLVRLDGVVEISKRYMTQGIY------SYLVRTLSKLGHVSEAHRLFCDM 398
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ ++ + S+ ++ G+ E+ +++ G V + YN + +
Sbjct: 399 WSFP-------VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA 451
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
++ L+E+M+ G D+ YN +I F + G++++A F+E+E + +
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+++ LIN K GDVD A + +K+M +K P+ T L+E + +RV A +
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 402 NAMRDVSFC-PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
+ V C P+ +Y +L+ L ++G+ EA+ L +KM +G PD Y
Sbjct: 572 EML--VKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 103/184 (55%), Gaps = 1/184 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D +N + + ++ I +++ +M++ G P++++YNIL+A F G++ EA ++
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
EE+ + D+ +YN++I K+G +++A FKEM+ G+ + VT+ L+ + K
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
V+ A ++++ML K +P T +L++ L + R +EA+++ + M+ P +
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY-SKMKQQGLTPDSIT 619
Query: 416 YELL 419
Y +L
Sbjct: 620 YTVL 623
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 173/446 (38%), Gaps = 72/446 (16%)
Query: 67 TPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQ---AL 123
TP S+I L S P LA+ FF +D + Y+ I+ ILSR+ L +
Sbjct: 98 TPDEASEILKSLNS-PLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVR 156
Query: 124 SIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIV 183
SI+ S + S + + +L+ + + L+ K L++ +
Sbjct: 157 SILDSMVKSNV-----HGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQ 211
Query: 184 RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDL 243
LRSR S + ++ EI R G K+ D+ ++N L
Sbjct: 212 AYLRSRDYS--------------------KAFDVYCEI---RRGGHKL----DIFAYNML 244
Query: 244 MMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGL 303
+ +D E +V+ +M++ C + Y+Y I++ GK EA L+ EM +GL
Sbjct: 245 LDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL 301
Query: 304 RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLIN------------- 350
L+V YNT++ K ++KA + F M G N T+ L+N
Sbjct: 302 TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDG 361
Query: 351 -------------------GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
K+G V A ++ DM + E + ++E LC
Sbjct: 362 VVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG 421
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
+ EA+E++ + + + Y + L + Q+ L KM G PD+ Y
Sbjct: 422 KTIEAIEML-SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 452 DAFIEGYKKLGNDQMAATLIMEMSRT 477
+ I + ++G A + E+ R+
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERS 506
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 138/335 (41%), Gaps = 61/335 (18%)
Query: 155 QCDSAPFVFDLLIKSCLEL---------------KKIDGSIEIVRMLRSRGISPQIRTCN 199
+CD A +F+ +I L L K +D +I++ + G P T +
Sbjct: 285 KCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYS 344
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
LL++ + +G EI SK + ++S+ L+ + G + +
Sbjct: 345 LLLNLLV-AEGQLVRLDGVVEI-------SKRYMTQGIYSY--LVRTLSKLGHVSEAHRL 394
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
+ +M F SY ++ CG GK EA ++ ++ KG+ D YNT+ K
Sbjct: 395 FCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
QI + F++M+ G + T+ LI + +VG+VD AI +++++ + D +P+
Sbjct: 455 LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD--- 511
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
II SY LI L ++G ++EA +M
Sbjct: 512 -------------------II--------------SYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
KG PD+ Y +E + K +MA +L EM
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 118/228 (51%), Gaps = 1/228 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D H++ ++ R + I ++ +EM R GC PN +YN L+ + ++EA ++
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+M+ G D Y T+I K+G ++ A + ++ M+ G+ ++ T+ +IN K
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G + +A ++ +M+ + P T ++I + + AL++ R+ M++ F P + +
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD-MQNAGFQPDKVT 536
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
Y ++++ L G +EEA + A+M K + PD +Y ++ + K GN
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 584
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 143/340 (42%), Gaps = 31/340 (9%)
Query: 89 FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEM 148
FF+ L HD ++Y+T+V L RA+ Q I K L D EM
Sbjct: 345 FFYWLKRQPGFKHDGHTYTTMVGNLGRAK---QFGEINK-------LLD---------EM 385
Query: 149 LLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
+ C ++ LI S + ++ + ++ G P T LI AK
Sbjct: 386 VRDG---CKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKA 442
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
G + + L PD +++ ++ + G + ++ EM GC
Sbjct: 443 -------GFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGC 495
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
PNL ++NI++AL A KL+ +M+ G + D Y+ ++ G +E+AE
Sbjct: 496 TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEG 555
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
F EM+ + + L++ + K G+VD A Y+ MLQ RP T L+
Sbjct: 556 VFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
R+SEA +++ +M + PS ++Y LL+ C D +
Sbjct: 616 RVHRMSEAYNLLQ-SMLALGLHPSLQTYTLLLS-CCTDAR 653
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 1/257 (0%)
Query: 218 FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNI 277
F EI L D + +P+ ++N L+ + R ++ V+N+M+ GC P+ +Y
Sbjct: 375 FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCT 434
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
L+ + G + A +++ M+ GL D Y+ II K+G + A F EM G
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
N VTF +I + K + ++A+ +Y+DM F+P+ T +++E L + EA
Sbjct: 495 CTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA- 553
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
E + M+ ++ P Y LL+ + G +++A + M G P++ ++ +
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLST 613
Query: 458 YKKLGNDQMAATLIMEM 474
+ ++ A L+ M
Sbjct: 614 FLRVHRMSEAYNLLQSM 630
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
++Y ++ + E KL +EM G + + YN +I + ++ +++A F +
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
M+ G E + VT+ LI+ + K G +D A+ +Y+ M + P+ T ++I L +
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 393 VSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYD 452
+ A + M P+ ++ ++I + E ALKL M GF+PD Y
Sbjct: 480 LPAAHRLF-CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYS 538
Query: 453 AFIEGYKKLGNDQMAATLIMEMSR 476
+E G + A + EM R
Sbjct: 539 IVMEVLGHCGFLEEAEGVFAEMQR 562
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
R G + D Y T++G ++ Q + + EM G + N+VT+ LI+ Y + +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
A+ V+ M + P+ T LI+ + + A+++ + M++ P +Y +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR-MQEAGLSPDTFTYSV 469
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+I L + G + A +L +M G+G P+L ++ I + K N + A L +M
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 133/294 (45%), Gaps = 11/294 (3%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
F L+ + +K+ +I + G + N ++ ++K + +F
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF--- 220
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
D K R PD+ S+ L+ G+ ++ + ++EV EM+ G P++ +Y I++
Sbjct: 221 ----DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C K EA + + EM + + + ++I G ++ A EFF+ + G
Sbjct: 277 HCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+ T+ L+ YC ++ A +M K P A T +++ L +R EA E+ +
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ 396
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
+S P+ +YE++++ C +++ A+K+ +M GKG P + ++ + I
Sbjct: 397 T----MSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 20/234 (8%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
++FF + + R C +P +F LI KK++ ++E +S G + T N L+
Sbjct: 287 IRFFNEMEQ--RNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR---PDVHSFNDLMMGFYRDGEMEMIEEV 259
+ Y E+ RL+ P+ +++ ++ R M+ +E
Sbjct: 345 GAYCWSQRMEDAYKTVDEM----------RLKGVGPNARTYDIILHHLIR---MQRSKEA 391
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
+ + C P + +Y I++ +FC + ++ A K+W+EM+ KG+ + ++++I
Sbjct: 392 YEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCH 451
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVD--SAILVYKDMLQK 371
++++A E+F EM G+ F L G D + ++V D L+K
Sbjct: 452 ENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 9/201 (4%)
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW---EEMRVKGLRLDVTAYNTIIGG 316
W E ++ G +YN AL GK+++ + +W ++M+ K L L + I
Sbjct: 117 WAENQK-GFKHTTSNYN---ALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRR 171
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
+ ++ ++++A F +ME G + S F +++ K +V A V+ M +K F P+
Sbjct: 172 YARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPD 231
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
+ +L+EG ++ + E+ R M+D F P +Y ++I C+ + EEA++
Sbjct: 232 IKSYTILLEGWGQELNLLRVDEVNRE-MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 437 AKMAGKGFEPDLKIYDAFIEG 457
+M + +P I+ + I G
Sbjct: 291 NEMEQRNCKPSPHIFCSLING 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 3/182 (1%)
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
W E + KG + + YN +I K Q + +M+ + S TF + Y +
Sbjct: 117 WAENQ-KGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYAR 174
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
V AI + M + F+ E+S +++ L + + V +A ++ + M+ F P K
Sbjct: 175 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF-DKMKKKRFEPDIK 233
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
SY +L++ ++ + ++ +M +GFEPD+ Y I + K + A EM
Sbjct: 234 SYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEM 293
Query: 475 SR 476
+
Sbjct: 294 EQ 295
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 42/262 (16%)
Query: 171 LELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSK 230
L L ++D E+ R ++ G P + ++I+ K K F E+ +
Sbjct: 246 LNLLRVD---EVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEM-------EQ 295
Query: 231 VRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMRE 290
+P H F L+ G + ++ E + + G +YN L+ +C +M +
Sbjct: 296 RNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMED 355
Query: 291 AEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK------------------- 331
A K +EMR+KG+ + Y+ I+ + + ++A E ++
Sbjct: 356 AYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFC 415
Query: 332 -------------EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
EM+ GV F LI C +D A + +ML RP
Sbjct: 416 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGH 475
Query: 379 TIGMLIEGLCEKKRVSEALEII 400
L + L ++ R + +++
Sbjct: 476 MFSRLKQTLLDEGRKDKVTDLV 497
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 160/353 (45%), Gaps = 25/353 (7%)
Query: 130 LVSRCLFDCNNAPVKFFEMLLK------TYRQCDSAPFVFDLLIKSCLELKKIDGSIEIV 183
++SRC D N +FF K +Y C S +++ + + G IE +
Sbjct: 103 VLSRC-GDAGNLGYRFFLWATKQPGYFHSYEVCKS----MVMILSKMRQFGAVWGLIEEM 157
Query: 184 RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDL 243
R I P+ L + + + A + ++ + D K L PD + F L
Sbjct: 158 RKTNPELIEPE-----LFVVLMRRF----ASANMVKKAVEVLDEMPKYGLEPDEYVFGCL 208
Query: 244 MMGFYRDGEMEMIEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
+ ++G ++ +V+ +M E+F PNL + L+ +C EGK+ EA+++ +M+ G
Sbjct: 209 LDALCKNGSVKEASKVFEDMREKFP--PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD-VDSA 361
L D+ + ++ G+ +G++ A + +M G E N + LI C+ +D A
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
+ V+ +M + + T LI G C+ + + ++ + MR PS+ +Y ++
Sbjct: 327 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVL-DDMRKKGVMPSQVTYMQIMV 385
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ Q EE L+L KM +G PDL IY+ I KLG + A L EM
Sbjct: 386 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM 438
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 13/266 (4%)
Query: 163 FDLLIKS-CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ +LI++ C K++D ++ + + G I T LIS G C +G+ +
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALIS------GFCK-WGMIDKG 361
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ + D K + P ++ +M+ + + E E+ +M+R GC P+L YN+++ L
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C G+++EA +LW EM GL V + +I GF G + +A FKEM G+ S
Sbjct: 422 ACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Query: 342 SV--TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE--ASTIGMLIEGLCEKKRVSEAL 397
T + L+N + ++ A V+ + K E S + I L K V EA
Sbjct: 482 PQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEAC 541
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRL 423
+ M ++ P +Y L+K L
Sbjct: 542 SYCLDMM-EMDLMPQPNTYAKLMKGL 566
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
F L+ + V A+ V +M + P+ G L++ LC+ V EA ++ + M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED-M 228
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGND 464
R+ F P+ + + L+ C +G++ EA ++ +M G EPD+ ++ + GY G
Sbjct: 229 RE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 465 QMAATLIMEMSR 476
A L+ +M +
Sbjct: 288 ADAYDLMNDMRK 299
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 151/339 (44%), Gaps = 55/339 (16%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF---- 218
F+ +I + E ++ +++ + ++ G++P T N LI GYGI
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIK----------GYGIAGKPE 167
Query: 219 --REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
E+ L + V + P++ +FN L+ + + ++E EV +ME G P+ +YN
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 277 -------------------------------------ILMALFCGEGKMREAEKLWEEMR 299
I++ +C EG++R+ + M+
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK 287
Query: 300 VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVD 359
+ ++ +N++I GF + + +E M+ V+++ +T+ ++N + G ++
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
A V+K+M++ +P+A +L +G K +A E++ + V P+ + +
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI--VESRPNVVIFTTV 405
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
I C +G M++A+++ KM G P++K ++ + GY
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
RP + S+ L+ + I + +E+E+ G + +N ++ F G M +A +
Sbjct: 77 RPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQ 136
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVE--SNSVTFEHLIN 350
+M+ GL + YNT+I G+ +G+ E++ E M E G V+ N TF L+
Sbjct: 137 ALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQ 196
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA-LEIIRNAMRDVSF 409
+CK V+ A V K M + RP+ T + +K A E++ +
Sbjct: 197 AWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA 256
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
P+ ++ +++ C +G++ + L+ +M E +L ++++ I G+
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 225 RDGDSKV-------RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNI 277
RDG +V ++ DV +++ +M + G ME +V+ EM + G P+ ++Y+I
Sbjct: 311 RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 370
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
L + + ++AE+L E + V+ R +V + T+I G+ +G ++ A F +M G
Sbjct: 371 LAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG 429
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
V N TFE L+ GY +V A V + M +PE ST +L E
Sbjct: 430 VSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 7/241 (2%)
Query: 195 IRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEME 254
+++ N L+S K F+E+ K+ + PD+ ++N ++ R G M+
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKEL------PEKLGITPDLVTYNTMIKALCRKGSMD 210
Query: 255 MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
I ++ E+E+ G P+L S+N L+ F E +++W+ M+ K L ++ +YN+ +
Sbjct: 211 DILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRV 270
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
G ++ + A M+ G+ + T+ LI Y +++ + Y +M +K
Sbjct: 271 RGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 375 PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALK 434
P+ T MLI LC+K + A+E+ A++ Y+ +++RL G+++EA +
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKH-KLLSRPNMYKPVVERLMGAGKIDEATQ 389
Query: 435 L 435
L
Sbjct: 390 L 390
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 155 QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSR-GISPQIRTCNLLISCVAKCKGSCA 213
C+ F+ L+ + + KK+D +++ + L + GI+P + T N +I + + KGS
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCR-KGSMD 210
Query: 214 G-YGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNL 272
IF E+ K PD+ SFN L+ FYR + +W+ M+ PN+
Sbjct: 211 DILSIFEEL-------EKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
SYN + K +A L + M+ +G+ DV YN +I + +E+ + + E
Sbjct: 264 RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNE 323
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
M+ G+ ++VT+ LI CK GD+D A+ V ++ ++ + ++E L +
Sbjct: 324 MKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGK 383
Query: 393 VSEALEIIRNA 403
+ EA ++++N
Sbjct: 384 IDEATQLVKNG 394
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK- 301
+M+ + G E ++++EM C + S+N L++ + K+ EA K ++E+ K
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G+ D+ YNT+I + G ++ F+E+E G E + ++F L+ + +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
++ M K+ P + + GL K+ ++AL +I + M+ P +Y LI
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLI-DVMKTEGISPDVHTYNALIT 306
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
D +EE +K +M KG PD Y
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 18/264 (6%)
Query: 201 LISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVW 260
L V K K SC FR++ GL ++ + + I+EV
Sbjct: 67 LTQKVEKFKRSCESES-FRQVHGL---------------YSAFIRRLREAKKFSTIDEVL 110
Query: 261 NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS 320
++F + + +M L+ G A KL++EM V ++N ++ + S
Sbjct: 111 QYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNS 170
Query: 321 GQIEKAEEFFKEM-ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
++++A + FKE+ E G+ + VT+ +I C+ G +D + +++++ + F P+ +
Sbjct: 171 KKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLIS 230
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
L+E ++ E + I + M+ + P+ +SY ++ L + + +AL L M
Sbjct: 231 FNTLLEEFYRRELFVEG-DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVM 289
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGN 463
+G PD+ Y+A I Y+ N
Sbjct: 290 KTEGISPDVHTYNALITAYRVDNN 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFN 241
I +++S+ +SP IR+ N + + + K F + L D + PDVH++N
Sbjct: 250 IWDLMKSKNLSPNIRSYNSRVRGLTRNKK-------FTDALNLIDVMKTEGISPDVHTYN 302
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
L+ + D +E + + +NEM+ G P+ +Y +L+ L C +G + A ++ EE
Sbjct: 303 ALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKH 362
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
L Y ++ +G+I++A + K +L
Sbjct: 363 KLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKL 396
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 143/280 (51%), Gaps = 14/280 (5%)
Query: 176 IDGSIEIVRMLRSRGISPQIRTCN-LLISC-VAK-CKGSCAGYGIFREIFGLRDGDSKVR 232
+D S+ + R L IS +++ N LL +C VAK K + Y +++G+
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIE------- 184
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
PD+ ++N ++ F G + EMER G PN S+ ++++ F E K E
Sbjct: 185 --PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
K+ M+ +G+ + V+ YN I K + ++A+ M G++ N+VT+ HLI+G+
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
C D + A ++K M+ + +P++ LI LC+ AL + + +M + ++ PS
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM-EKNWVPS 361
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYD 452
+ L+ L +D ++EEA +L ++ K F ++++++
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRNVELWN 400
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 132/296 (44%), Gaps = 10/296 (3%)
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHS-- 239
I+ + R+ ++P R + S + + A F + L DG + RPD+ S
Sbjct: 63 ILEICRAASLTPDCRIDRIAFSAAVE---NLAEKKHFSAVSNLLDG--FIENRPDLKSER 117
Query: 240 FNDLMMGFYRDGEM-EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
F + Y M + V+ ++E+F + S N L+ +EA++++ EM
Sbjct: 118 FAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEM 177
Query: 299 -RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
++ G+ D+ YN +I F +SG + EME G++ NS +F +I+G+
Sbjct: 178 PKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDK 237
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYE 417
D V M + ST + I+ LC++K+ EA ++ + M P+ +Y
Sbjct: 238 SDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALL-DGMLSAGMKPNTVTYS 296
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
LI C + EEA KL M +G +PD + Y I K G+ + A +L E
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKE 352
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ +IK E S IV + +GI P + L+IS
Sbjct: 189 TYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMIS------------------ 230
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
GFY + + + + +V M+ G + +YNI +
Sbjct: 231 ------------------------GFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQS 266
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C K +EA+ L + M G++ + Y+ +I GF E+A++ FK M G + +
Sbjct: 267 LCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
S + LI CK GD ++A+ + K+ ++K++ P S + L+ GL + +V EA E+I
Sbjct: 327 SECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 83/140 (59%)
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M R+ P +YN ++ FC + ++ +A+++ + M KG DV ++T+I G+ K+ +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
++ E F EM G+ +N+VT+ LI+G+C+VGD+D+A + +M+ P+ T
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 383 LIEGLCEKKRVSEALEIIRN 402
++ GLC KK + +A I+ +
Sbjct: 121 MLAGLCSKKELRKAFAILED 140
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P ++N ++ GF + ++ + + + M GC P++ +++ L+ +C ++ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ EM +G+ + Y T+I GF + G ++ A++ EM GV + +TF ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 355 VGDVDSAILVYKDMLQK 371
++ A + +D LQK
Sbjct: 128 KKELRKAFAILED-LQK 143
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
++T+ +I+G+CK VD A + M K P+ T LI G C+ KRV +EI
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
R + +Y LI C+ G ++ A L +M G PD + + G
Sbjct: 69 CEMHRR-GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
++ +I + ++D + ++ + S+G SP + T + LI+ K K G IF E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ R G + + ++ L+ GF + G+++ +++ NEM G P+ +++ ++A
Sbjct: 71 MH--RRG-----IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 281 LFCGEGKMREAEKLWEEMR 299
C + ++R+A + E+++
Sbjct: 124 GLCSKKELRKAFAILEDLQ 142
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 168/400 (42%), Gaps = 36/400 (9%)
Query: 79 KSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDC 138
KS + +F L + D +++ I++ LS+ QAL + S R +C
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA--EC 184
Query: 139 NNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRM----LRSRGISPQ 194
V F S + L + G IE R + + G+ P
Sbjct: 185 RPDVVTF----------------------TSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 222
Query: 195 IRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEME 254
I + N L+ G+ A +G+ + + + PDV S+ L+ + R +
Sbjct: 223 IVSYNALM-------GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 255 MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
+EV+ M + PN+ +YN L+ + G + EA +++ +M G++ +V + T++
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
+S + + + G+ N+ + I Y +++ AI +Y+ M +K +
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 375 PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALK 434
++ T +LI G C + EA+ ++ M D+S +++ Y ++ + GQ+ EA
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKE-MEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 435 LQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ +M G EPD+ Y + + Y A L +EM
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 494
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 179 SIEIVRMLRSRGISPQI-RTCNLLISC--------------VAKCKGSCAGYGIFREIFG 223
++EI R + GI P + C LL +C A+ +G + G
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 224 -------------LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
L K +++ D +F L+ G R + EME
Sbjct: 372 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 431
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
Y+ ++ + +G++ EAE ++ +M++ G DV AY +++ + S + KA E F
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC-- 388
EME G+E +S+ L+ + K G S + V D++++ P + I C
Sbjct: 492 LEMEANGIEPDSIACSALMRAFNKGGQ-PSNVFVLMDLMREKEIPFTGAVFFEIFSACNT 550
Query: 389 --EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
E KR + ++++ + +S + + L K G++E +KL K+ G
Sbjct: 551 LQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGK----SGKVEAMMKLFYKIIASGVGI 606
Query: 447 DLKIYDAFIEGYKKLGN 463
+LK Y +E +GN
Sbjct: 607 NLKTYAILLEHLLAVGN 623
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 10/264 (3%)
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N++I A+ G+F E+ K +PD +++ L+ R G+
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEM-------QKWSCKPDAETYDALINAHGRAGQWRWAMN 67
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
+ ++M R P+ +YN L+ G REA ++ ++M G+ D+ +N ++ +
Sbjct: 68 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 127
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK--DFRPE 376
Q KA +F+ M+ V ++ TF +I K+G A+ ++ M +K + RP+
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
T ++ K + E + AM P+ SY L+ G AL +
Sbjct: 188 VVTFTSIMHLYSVKGEI-ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 437 AKMAGKGFEPDLKIYDAFIEGYKK 460
+ G PD+ Y + Y +
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGR 270
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 262 EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
EM+++ C P+ +Y+ L+ G+ R A L ++M + + YN +I SG
Sbjct: 36 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 95
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ-KDFRPEASTI 380
+A E K+M GV + VT +++ Y K G S L Y ++++ RP+ +T
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTF 154
Query: 381 GMLIEGLCEKKRVSEALEIIRNAMRDV-SFC-PSRKSYELLIKRLCEDGQMEEALKLQAK 438
++I L + + S+AL++ N+MR+ + C P ++ ++ G++E +
Sbjct: 155 NIIIYCLSKLGQSSQALDLF-NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 439 MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
M +G +P++ Y+A + Y G A +++ ++ +
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
>AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16091120-16092454 FORWARD
Length = 444
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 151/351 (43%), Gaps = 28/351 (7%)
Query: 90 FFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEML 149
FF + N C+ Y+ + ++ +L R R Q+L ++ LV C V+ E
Sbjct: 122 FFKIPNFR-CVPSAYTLNALLLVLVRKR---QSLELVPEILVKAC-----RMGVRLEES- 171
Query: 150 LKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
F +LI + + ++D + E+VR + + R + L+S V K K
Sbjct: 172 ------------TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK 219
Query: 210 GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
S ++ G + K R P + + +M G + + V N+M+
Sbjct: 220 DSSCF-----DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVE 274
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
P+L Y I++ + +A+KL++E+ + GL DV YN I G K IE A +
Sbjct: 275 PDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKM 334
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
M G E N VT+ LI K GD+ A ++K+M + T ++I E
Sbjct: 335 MSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIE 394
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMA 440
V A ++ A F S + E +I RLCE G M++A++L A +
Sbjct: 395 VDEVVCAHGLLEEAFNMNVFVKSSR-IEEVISRLCEKGLMDQAVELLAHLV 444
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 45/276 (16%)
Query: 240 FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMR 299
F D++ + G +E EV+ ++ F CVP+ Y+ N L+ + + R++ +L E+
Sbjct: 102 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLV---RKRQSLELVPEIL 158
Query: 300 VK----GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
VK G+RL+ + + +I + G+++ A E + M V + + L++ CK
Sbjct: 159 VKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH 218
Query: 356 GDVD--SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR-------- 405
D I +D+ + F P +++ L E R E + ++ N M+
Sbjct: 219 KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVL-NQMKCDRVEPDL 277
Query: 406 -------------------DVSF--------CPSRKSYELLIKRLCEDGQMEEALKLQAK 438
D F P +Y + I LC+ +E ALK+ +
Sbjct: 278 VCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSS 337
Query: 439 MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
M G EP++ Y+ I+ K G+ A TL EM
Sbjct: 338 MNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEM 373
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 168/400 (42%), Gaps = 36/400 (9%)
Query: 79 KSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDC 138
KS + +F L + D +++ I++ LS+ QAL + S R +C
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA--EC 316
Query: 139 NNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRM----LRSRGISPQ 194
V F S + L + G IE R + + G+ P
Sbjct: 317 RPDVVTF----------------------TSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 354
Query: 195 IRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEME 254
I + N L+ G+ A +G+ + + + PDV S+ L+ + R +
Sbjct: 355 IVSYNALM-------GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 255 MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
+EV+ M + PN+ +YN L+ + G + EA +++ +M G++ +V + T++
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
+S + + + G+ N+ + I Y +++ AI +Y+ M +K +
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 375 PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALK 434
++ T +LI G C + EA+ ++ M D+S +++ Y ++ + GQ+ EA
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKE-MEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 435 LQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ +M G EPD+ Y + + Y A L +EM
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 37/317 (11%)
Query: 179 SIEIVRMLRSRGISPQI-RTCNLLISC--------------VAKCKGSCAGYGIFREIFG 223
++EI R + GI P + C LL +C A+ +G + G
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 224 -------------LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
L K +++ D +F L+ G R + EME
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
Y+ ++ + +G++ EAE ++ +M++ G DV AY +++ + S + KA E F
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 623
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC-- 388
EME G+E +S+ L+ + K G S + V D++++ P + I C
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQ-PSNVFVLMDLMREKEIPFTGAVFFEIFSACNT 682
Query: 389 --EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
E KR + ++++ + +S + + L K G++E +KL K+ G
Sbjct: 683 LQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGK----SGKVEAMMKLFYKIIASGVGI 738
Query: 447 DLKIYDAFIEGYKKLGN 463
+LK Y +E +GN
Sbjct: 739 NLKTYAILLEHLLAVGN 755
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 10/283 (3%)
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N++I A+ G+F E+ K +PD +++ L+ R G+
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEM-------QKWSCKPDAETYDALINAHGRAGQWRWAMN 199
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
+ ++M R P+ +YN L+ G REA ++ ++M G+ D+ +N ++ +
Sbjct: 200 LMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK 259
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK--DFRPE 376
Q KA +F+ M+ V ++ TF +I K+G A+ ++ M +K + RP+
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
T ++ K + E + AM P+ SY L+ G AL +
Sbjct: 320 VVTFTSIMHLYSVKGEI-ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 437 AKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQK 479
+ G PD+ Y + Y + A + + M + ++
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 208/482 (43%), Gaps = 40/482 (8%)
Query: 14 PKPIKAYHLYSSASTPPSDQSHIVSTV--VSLLIHHRSKSRWTNLRSLLYSTKTLTPIHF 71
P P+ + H+ PS + ++V + +L I H + + Y L I
Sbjct: 5 PIPLLS-HVRGLIRQGPSSRFYVVPALARTNLTISHSEQVKEGTFD---YKALELNDIGV 60
Query: 72 SQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALV 131
++ +K +P+LAL F N +L + +Y+T++ I+ L + L LV
Sbjct: 61 LRVLNSMKDDPYLALSFLKRIEGNVTL--PSVQAYATVIRIVCGWGLD-KKLDTFLFELV 117
Query: 132 SRCLFDCNNAPVKFFEM-LLKTYRQCDSAPF----VFDLLIKSCLELKKIDGSIEIV-RM 185
R + F M LLK + + + V L+K+ L D +I+I R
Sbjct: 118 RR-----GDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRA 172
Query: 186 LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
S G +P I+ N LIS + S G F EI ++ L D H++ ++
Sbjct: 173 YYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEI-------ERLGLDADAHTYVLVVQ 225
Query: 246 GFYRDGEMEMIEEVWNEM----ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
+R+ + E +E++ + + R CV + N + L C A L + +R
Sbjct: 226 ALWRNDDKEELEKLLSRLLISETRNPCV---FYLNFIEGL-CLNQMTDIAYFLLQPLRDA 281
Query: 302 GLRLDVT----AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
+ +D + AY ++ G +IE AE +ME G++ + + +I G+ K +
Sbjct: 282 NILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMN 341
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYE 417
+ A+ V+ ML+K R + +++ C+ SEA ++ + R+ + R Y
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKE-FRETNISLDRVCYN 400
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
+ L + G++EEA++L +M GKG PD+ Y I G G A L++EM T
Sbjct: 401 VAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
Query: 478 QK 479
K
Sbjct: 461 GK 462
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 20/314 (6%)
Query: 157 DSAPFVFDLLIKSCLELKKIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
D +V+ +I+ + I ++++ +ML+ R R +++S + +C
Sbjct: 323 DPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK-----RINCVIVSSILQCY---CQM 374
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G F E + L + + D +N + G++E E++ EM G P++ +Y
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINY 434
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
L+ C +GK +A L EM G D+ YN + GG +G ++A E K ME
Sbjct: 435 TTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
GV+ VT +I G G++D A Y+ + K +AS +++G C +
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLDH 550
Query: 396 ALE-IIRNAMRDVSFCPSRKSYELLIKRLC-EDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
A E IR + F + Y L LC E + +A L +M G EP+ +Y
Sbjct: 551 AFERFIR-----LEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGK 605
Query: 454 FIEGYKKLGNDQMA 467
I + ++ N + A
Sbjct: 606 LIGAWCRVNNVRKA 619
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 15/233 (6%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K+ + P+ + L+ + R + E + + VP+L++Y I++ +C + +
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
+A L+E+M+ + ++ DV Y+ ++ + + +EME V + V + +I
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMI 705
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
N YC + D+ ++KDM +++ P+ T +L++ E+ E M+
Sbjct: 706 NRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE--------MKAFDV 757
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
P Y +LI C+ G + EA ++ +M G +PD Y A I K+G
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 135/345 (39%), Gaps = 69/345 (20%)
Query: 172 ELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS--CV-AKCK------------------- 209
+L K++ +IE+ R + +GI+P + LI C+ KC
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIV 467
Query: 210 ------GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
G A G+ +E F ++P + N ++ G GE++ E + +
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 264 ER---------------FGCVPNLYS-------------YNILMALFCGEGK-MREAEKL 294
E GC+ + + Y L C E + +A+ L
Sbjct: 528 EHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDL 587
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ M G+ + + Y +IG + + + KA EFF+ + + + T+ +IN YC+
Sbjct: 588 LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE--KKRVSEALEIIRNAMRDVSFCPS 412
+ + A +++DM ++D +P+ T +L+ E KR EA ++I P
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVI----------PD 697
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
Y ++I R C +++ L M + PD+ Y ++
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 123/278 (44%), Gaps = 43/278 (15%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
LI + + + + E +L ++ I P + T ++I+ + Y +F ++
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM---- 661
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
+ ++PDV +++ L+ D E++M EME F +P++ Y I++ +C
Sbjct: 662 ---KRRDVKPDVVTYSVLLNS---DPELDM----KREMEAFDVIPDVVYYTIMINRYCHL 711
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGG-------------------FY-------- 318
+++ L+++M+ + + DV Y ++ FY
Sbjct: 712 NDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQ 771
Query: 319 -KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
K G + +A+ F +M GV+ ++ + LI CK+G + A +++ M++ +P+
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 378 STIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
LI G C V +A+++++ M + P++ S
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKE-MLEKGIKPTKAS 868
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%)
Query: 262 EMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
EM+ F P+++ Y +L+ C G + EA++++++M G+ D Y +I K G
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTI 380
+++A+ F M GV+ + V + LI G C+ G V A+ + K+ML+K +P +++
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASL 869
>AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1672161-1673675 FORWARD
Length = 504
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 200/478 (41%), Gaps = 74/478 (15%)
Query: 58 SLLYSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRAR 117
S++ + LTP SQI L+ + NP AL+ F + H+ Y+T++ IL ++
Sbjct: 2 SVVRWPRVLTPSLLSQI-LKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSN 60
Query: 118 LKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQ------------------CDSA 159
++ +I+ C +C ++ F +++T+ + C +
Sbjct: 61 RVLEMKYVIERMKEDSC--ECKDS---VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNW 115
Query: 160 PFVFDLLIKSCLELKKIDGSIEIVR-MLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF 218
FD L++ ++ +++ + I R ++ +I NLL+ + + S +F
Sbjct: 116 SLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVF 175
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEME----MIEEVWNEMERFGCVPNLYS 274
+E+ + PD S+ LM GF +G++E ++ ++ + + G ++
Sbjct: 176 QEM-------NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVV 228
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS-------------- 320
Y IL+ C G++ +A ++ ++ KGL+ Y+ I G ++S
Sbjct: 229 YRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTE 288
Query: 321 -----------------------GQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
G++ + EE M G E + + C+ G
Sbjct: 289 TLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGK 348
Query: 358 VDSAI-LVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+ A+ ++ K+M+Q P +LI+GLC+ + EA+ ++ + VS + ++Y
Sbjct: 349 LKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ L+ LC DGQ EA ++ +M K P ++ Y I+G + A + EM
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 249 RDGEM-EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK-GLRLD 306
R G++ E + + EM + C+P + YN+L+ C +GK EA ++M + +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 307 VTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYK 366
Y T++ G + GQ +A + +EM + T+ +I G C + A++ +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 367 DMLQKDFRPEASTIGMLIEGLC 388
+M+ +D PE+S L E +C
Sbjct: 465 EMVSQDMVPESSVWKALAESVC 486
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 17/304 (5%)
Query: 150 LKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
+K+ C F F +LI C +L + D IV + G+ T N +I K
Sbjct: 205 MKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKA- 263
Query: 210 GSCAGYGIFREIFG-----LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
G+F E+ + DGDS PDV + N ++ + M +E ++ +
Sbjct: 264 ------GMFEEMESVLADMIEDGDS----LPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ 313
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G P++ ++NIL+ F G ++ + + M + L YN +I F K+G+IE
Sbjct: 314 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 373
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
K ++ F++M+ GV+ NS+T+ L+N Y K G V V + ++ D + +I
Sbjct: 374 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 433
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+ ++ E+ M + P + ++ +IK G + +L+ +M G
Sbjct: 434 NAYGQAGDLATMKELYIQ-MEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSGE 492
Query: 445 EPDL 448
D+
Sbjct: 493 NLDI 496
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 8/194 (4%)
Query: 257 EEVW--NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
E +W + F + +YN+++ LF +G + A+ L +EM GL DV Y ++I
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD-- 372
G+ +G+I+ A KEM NSVT+ ++ G CK GD++ A+ + +M ++D
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 373 --FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME 430
P A T ++I+ CEK+RV EAL ++ + M + P+R + +LI+ + E+ +
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEAL-LVLDRMGNRGCMPNRVTACVLIQGVLENDEDV 326
Query: 431 EAL-KLQAKMAGKG 443
+AL KL K+ G
Sbjct: 327 KALSKLIDKLVKLG 340
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 9/217 (4%)
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL--DVTAYN 311
++I+ V + C N+ + I++ L C + + + E LW + + D AYN
Sbjct: 112 DLIKYVIESYRKEECFVNVKTMRIVLTL-CNQANLAD-EALWVLRKFPEFNVCADTVAYN 169
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
+I F G + A+ KEM+ G+ + +T+ +INGYC G +D A + K+M +
Sbjct: 170 LVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKH 229
Query: 372 DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS---FCPSRKSYELLIKRLCEDGQ 428
D + T ++EG+C+ + ALE++ ++ P+ +Y L+I+ CE +
Sbjct: 230 DCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRR 289
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
+EEAL + +M +G P+ I+G L ND+
Sbjct: 290 VEEALLVLDRMGNRGCMPNRVTACVLIQGV--LENDE 324
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
D ++N ++ F G++ + + + EM+ G P++ +Y ++ +C GK+ +A +L
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL----GGVESNSVTFEHLIN 350
+EM L+ Y+ I+ G KSG +E+A E EME G + N+VT+ +I
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL-----EIIRNAMR 405
+C+ V+ A+LV M + P T +LI+G+ E +AL ++++
Sbjct: 283 AFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGV 342
Query: 406 DVSFCPSRKSYELL-IKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+S C S + L+ +KR EEA K+ M +G PD
Sbjct: 343 SLSECFSSATVSLIRMKR------WEEAEKIFRLMLVRGVRPD 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 106/277 (38%), Gaps = 41/277 (14%)
Query: 231 VRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMRE 290
V L PDV ++ ++ G+ G+++ + EM + CV N +Y+ ++ C G M
Sbjct: 194 VGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMER 253
Query: 291 AEKLWEEMRVKG----LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT-- 344
A +L EM + + + Y +I F + ++E+A M G N VT
Sbjct: 254 ALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTAC 313
Query: 345 ---------------FEHLINGYCKVGDV-------------------DSAILVYKDMLQ 370
LI+ K+G V + A +++ ML
Sbjct: 314 VLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLV 373
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRN-AMRDVSFCPSRKSYELLIKRLCEDGQM 429
+ RP+ + LC +R + + + +DV + +L+ LC+ G
Sbjct: 374 RGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNS 433
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQM 466
EA KL M K + + IE KK G++ +
Sbjct: 434 WEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDL 470
>AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30285358-30286704 REVERSE
Length = 448
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 12/238 (5%)
Query: 241 NDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV 300
N ++ G+ + G +E W +M+ G +L+SY+I M + C GK +A KL++EM+
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 301 KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDS 360
+ ++LDV AYNT+I S +E F+EM G E N T +I C+ G +
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 361 AILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI----IRNAMRDVSFCPSRKSY 416
A + +M ++ +P++ T L L ++ SE L + IR+ +R P +Y
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVR-----PKMDTY 364
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+L+++ G ++ L + M G PD Y+A I+ + G MA EM
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 118/264 (44%), Gaps = 12/264 (4%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ +L+++ +L E + + + G++ + + ++ + + K +++E+
Sbjct: 191 IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 250
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
R++ DV ++N ++ +E V+ EM GC PN+ ++N ++ L
Sbjct: 251 -------KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 303
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C +G+MR+A ++ +EM +G + D Y + K +I F M GV
Sbjct: 304 LCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGRMIRSGVRPK 360
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
T+ L+ + + G + + V+K M + P+++ +I+ L +K + A E
Sbjct: 361 MDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMARE-YE 419
Query: 402 NAMRDVSFCPSRKSYELLIKRLCE 425
M + P R+ EL+ K L E
Sbjct: 420 EEMIERGLSPRRRP-ELVEKSLDE 442
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
V N +N+++ + G + ++ W++M +G+ D+ +Y+ + KSG+ KA +
Sbjct: 186 VSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVK 245
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
+KEM+ ++ + V + +I V+ I V+++M ++ P +T +I+ LC
Sbjct: 246 LYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLC 305
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
E R+ +A ++ + M P +Y L RL + E L L +M G P +
Sbjct: 306 EDGRMRDAYRML-DEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKM 361
Query: 449 KIYDAFIEGYKKLG 462
Y + +++ G
Sbjct: 362 DTYVMLMRKFERWG 375
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 18/240 (7%)
Query: 202 ISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWN 261
I+C+ KC G G +E + +PDV+++N ++ R G + + +
Sbjct: 168 ITCLMKCLGE---EGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 262 EME--RFGCVPNLYSYNILMALFCGEG-----------KMREAEKLWEEMRVKGLRLDVT 308
+M+ F P+ Y+Y IL++ +C G +M EA +++ EM +G DV
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
YN +I G K+ +I +A E F++M+ G N VT+ I Y +++ AI + + M
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 369 LQKDFR-PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDG 427
+ P +ST LI L E +R +EA +++ M + P +Y+L+ L +G
Sbjct: 345 KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVE-MVEAGLVPREYTYKLVCDALSSEG 403
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 20/293 (6%)
Query: 197 TCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMI 256
TC + +AK + R++ +G + V S LM +G ++
Sbjct: 129 TCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVV----TTASITCLMKCLGEEGFVKEA 184
Query: 257 EEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL--DVTAYNTII 314
+ M+ + C P++Y+YN ++ C G ++A L ++M++ G R D Y +I
Sbjct: 185 LATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILI 244
Query: 315 GGFYKSG-----------QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAIL 363
+ + G ++ +A F+EM G + VT+ LI+G CK + A+
Sbjct: 245 SSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALE 304
Query: 364 VYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRL 423
+++DM K P T I + A+E++R + P +Y LI L
Sbjct: 305 LFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHAL 364
Query: 424 CEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
E + EA L +M G P Y + L ++ +A+TL E+ +
Sbjct: 365 VETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA---LSSEGLASTLDEELHK 414
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 143/307 (46%), Gaps = 8/307 (2%)
Query: 174 KKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL 233
++ +I ++ ++ S GI P L++ + CK GY + + + + D
Sbjct: 120 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQL--CKRGNVGYAM-QLVEKMEDHGYP--- 173
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+ ++N L+ G G + + + + G PN ++Y+ L+ E EA K
Sbjct: 174 -SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L +E+ VKG ++ +YN ++ GF K G+ + A F+E+ G ++N V++ L+ C
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR-DVSFCPS 412
G + A + +M D P T +LI L R +AL++++ + + F +
Sbjct: 293 CDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVT 352
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
SY +I RLC++G+++ +K +M + +P+ Y+A + Q A +I
Sbjct: 353 ATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQ 412
Query: 473 EMSRTQK 479
+S QK
Sbjct: 413 SLSNKQK 419
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 141/338 (41%), Gaps = 50/338 (14%)
Query: 124 SIIKSALV-SRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEI 182
++ +ALV C+ N ++F E L++ + F + L+++ + + D ++++
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQ--KGLAPNAFTYSFLLEAAYKERGTDEAVKL 233
Query: 183 VRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFND 242
+ + +G P + + N+L++
Sbjct: 234 LDEIIVKGGEPNLVSYNVLLT--------------------------------------- 254
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
GF ++G + ++ E+ G N+ SYNIL+ C +G+ EA L EM
Sbjct: 255 ---GFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE--SNSVTFEHLINGYCKVGDVDS 360
V YN +I G+ E+A + KEM G + + ++ +I CK G VD
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDL 371
Query: 361 AILVYKDMLQKDFRPEASTIGMLIEGLCE-KKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
+ +M+ + +P T I LCE +V EA II+ ++ + C + Y+ +
Sbjct: 372 VVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQ-SLSNKQKCCTHDFYKSV 429
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
I LC G A +L +M GF+PD Y A I G
Sbjct: 430 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRG 467
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 1/243 (0%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+P+V L+ + ++ V M G +P+ +Y L+ C G + A +
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L E+M G + YN ++ G G + ++ +F + + G+ N+ T+ L+
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K D A+ + +++ K P + +L+ G C++ R +A+ + R + F +
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE-LPAKGFKANV 281
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
SY +L++ LC DG+ EEA L A+M G P + Y+ I G + A ++ E
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Query: 474 MSR 476
MS+
Sbjct: 342 MSK 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
G PN+ L+ C ++++A ++ E M G+ D +AY ++ K G + A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 327 EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG 386
+ ++ME G SN+VT+ L+ G C +G ++ ++ + ++QK P A T L+E
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
+++ EA++++ + P+ SY +L+ C++G+ ++A+ L ++ KGF+
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGE-PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 447 DLKIYDAFIEGYKKLGNDQMAATLIMEM 474
++ Y+ + G + A +L+ EM
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEM 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 157/390 (40%), Gaps = 81/390 (20%)
Query: 158 SAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGI 217
S ++ L++ L ++ S++ V L +G++P T + L+ K +G+ +
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKL 233
Query: 218 FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNI 277
EI ++ G+ P++ S+N L+ GF ++G + ++ E+ G N+ SYNI
Sbjct: 234 LDEII-VKGGE------PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 278 LMALFCGEGKMREAEKLWEEMR----------------------------------VKG- 302
L+ C +G+ EA L EM KG
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 303 --LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF-------EH------ 347
R+ T+YN +I K G+++ + EM + N T+ EH
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE 406
Query: 348 ----------------------LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIE 385
+I C+ G+ +A + +M + F P+A T LI
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 386 GLCEKKRVSEALEIIRNAMRDVSFC-PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
GLC + + A+E++ + M + C P+ ++ +I LC+ + + A+++ M K
Sbjct: 467 GLCLEGMFTGAMEVL-SIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKR 525
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
P+ Y +EG ++A ++ E+
Sbjct: 526 MPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
E + G + +V ++ K+ +++KA + M G+ ++ + +L+N CK
Sbjct: 95 ESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKR 154
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G+V A+ + + M + T L+ GLC ++++L+ + M+ P+ +
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK-GLAPNAFT 213
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
Y L++ ++ +EA+KL ++ KG EP+L Y+ + G+ K G A L E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 102/201 (50%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P + + + L R + + + + + + G L SY+++++ C G++RE+
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+EM+ +GL DV+ YN +I K+ I A++ + EM + G + N T+ LI +
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
G+ + ++ ++ ML++ P+ + LIEGLC++ ++ A+E+ R M +R+
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRR 539
Query: 415 SYELLIKRLCEDGQMEEALKL 435
+ LC +G EA +L
Sbjct: 540 VLSEFVLNLCSNGHSGEASQL 560
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
K D I+ +L S+G ++++ +L+IS + K G RE + K L
Sbjct: 377 KSDHLIKAYELLSSKGYFSELQSYSLMISFLCKA-------GRVRESYTALQEMKKEGLA 429
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PDV +N L+ + + +++W+EM GC NL +YN+L+ EG+ E+ +L
Sbjct: 430 PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
+++M +G+ D T Y ++I G K +IE A E F++
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 54/298 (18%)
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
L++ + KC + I E LR+ D K PD ++ + F G + + V
Sbjct: 228 LILHSLCKCSREMDAFYILEE---LRNIDCK----PDFMAYRVIAEAFVVTGNLYERQVV 280
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG--- 316
+ + G P Y + ++ EA+++ E + +D + +IG
Sbjct: 281 LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSA 340
Query: 317 ------------FYKSGQI----------------EKAEEFFKEMEL---GGVESNSVTF 345
+G++ +K++ K EL G S ++
Sbjct: 341 VDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSY 400
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
+I+ CK G V + ++M ++ P+ S LIE C+ E+IR A +
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKA-------EMIRPAKK 453
Query: 406 --DVSFCPSRK----SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
D F K +Y +LI++L E+G+ EE+L+L KM +G EPD IY + IEG
Sbjct: 454 LWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 170/399 (42%), Gaps = 32/399 (8%)
Query: 85 ALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVK 144
A RFF + + HD +Y++++ IL++ R +S+++ L ++
Sbjct: 178 AFRFFCWAAERQGFA-HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL------TME 230
Query: 145 FFEMLLKTY---RQCDSAPFVFDLLIK--------------SCLELKKIDGSIEIVRMLR 187
F + +K + ++ A +F+L+ K L K+ +++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 188 SRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGF 247
+P + T +L++ + + I+ ++ + G L+PD+ + N ++ G
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM--IDQG-----LKPDIVAHNVMLEGL 343
Query: 248 YRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDV 307
R + ++++ M+ G PN+ SY I++ FC + M A + +++M GL+ D
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 308 TAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKD 367
Y +I GF +++ E KEM+ G + T+ LI + A +Y
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDG 427
M+Q + P T M+++ R E + M CP SY +LI+ L +G
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYF-MARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEG 522
Query: 428 QMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQM 466
+ EA + +M KG + L Y+ F + + G ++
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
+++F+ ++ + Q D+A V+ LI KK+D E+++ ++ +G P +T N LI
Sbjct: 388 IEYFDDMVDSGLQPDAA--VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
+A K I+ ++ + + P +H+FN +M ++ EM VW E
Sbjct: 446 KLMANQKMPEHATRIYNKMI-------QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEE 498
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M + G P+ SY +L+ GEGK REA + EEM KG++ + YN F++ GQ
Sbjct: 499 MIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Query: 323 IEKAEEFFKEMELGG 337
E EE + + G
Sbjct: 559 PEIFEELAQRAKFSG 573
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 30/291 (10%)
Query: 154 RQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA 213
R A +++ +I L+ + ++ + +LRSR S I+ +++ K KG C
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM-----KSKGPC- 365
Query: 214 GYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
P+V S+ ++ F + ME E +++M G P+
Sbjct: 366 ---------------------PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
Y L+ F + K+ +L +EM+ KG D YN +I E A + +M
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM 464
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
+E + TF ++ Y + + V+++M++K P+ ++ +LI GL + +
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME--EALKLQAKMAGK 442
EA + M D Y GQ E E L +AK +GK
Sbjct: 525 REACRYLEE-MLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGK 574
>AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22704630-22706126 REVERSE
Length = 498
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREA 291
R PDV + N L++GF G++ E ++EM + G PN +Y I + FC + EA
Sbjct: 205 RFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEA 264
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+L+E+M + V T+I G + KA + F E+ G+ + + L++
Sbjct: 265 LRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSS 324
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS-EALEIIRNAMRDVSFC 410
K GDV AI V K+M +K P++ T + G+ + K + M++ S
Sbjct: 325 LMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLV 384
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
P + +L+K C +G++ L L M KG+ P
Sbjct: 385 PKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCP 420
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
+NIL+ FC E +M+EA ++E++ + DV N ++ GF ++G + E F+ EM
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G + NSVT+ I+G+CK + A+ +++DM + DF + LI G +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAF 454
+A ++ + + P +Y L+ L + G + A+K+ +M KG EPD + +
Sbjct: 298 KARQLF-DEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 455 IEGYKK 460
G K
Sbjct: 357 FIGMMK 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 251 GEMEMIEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKLWE-----EMRVKGLR 304
M ++ W M E PNL S+ + L C K E+ E E + +
Sbjct: 114 ARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKK 173
Query: 305 LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV 364
V +N ++ F ++++A F+++ + T L+ G+ + GDV + L
Sbjct: 174 FGVDEFNILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELF 232
Query: 365 YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLC 424
Y +M+++ F+P + T G+ I+G C+K+ EAL + + M + F + + LI
Sbjct: 233 YHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFED-MDRLDFDITVQILTTLIHGSG 291
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+A +L +++ +G PD Y+A + K G+ A ++ EM
Sbjct: 292 VARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEM 341
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 166/390 (42%), Gaps = 33/390 (8%)
Query: 85 ALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVK 144
A RFF + + HD +Y++++ IL++ R +S+++
Sbjct: 177 AFRFFCWAAERQGFA-HDSRTYNSMMSILAKTRQFETMVSVLE----------------- 218
Query: 145 FFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
EM K ++ F + +K+ K+ ++ I +++ + T N L+
Sbjct: 219 --EMGTKGLLTMET----FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDS 272
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
+ + K +F ++ K R P++ ++ L+ G+ R + +WN+M
Sbjct: 273 LGRAKLGKEAQVLFDKL--------KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 324
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G P++ ++N+++ K +A KL+ M+ KG +V +Y +I F K +E
Sbjct: 325 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 384
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
A E+F +M G++ ++ + LI G+ +D+ + K+M +K P+ T LI
Sbjct: 385 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+ L +++ E I N M PS ++ +++K E + +M KG
Sbjct: 445 K-LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 503
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
PD Y I G G + A + EM
Sbjct: 504 CPDDNSYTVLIRGLISEGKSREACRYLEEM 533
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
+++F+ ++ + Q D+A V+ LI KK+D E+++ ++ +G P +T N LI
Sbjct: 387 IEYFDDMVDSGLQPDAA--VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
+A K G I+ ++ + + P +H+FN +M ++ EM VW+E
Sbjct: 445 KLMANQKMPEHGTRIYNKMI-------QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 497
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M + G P+ SY +L+ EGK REA + EEM KG++ + YN F++ GQ
Sbjct: 498 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
Query: 323 IEKAEEFFKEMELGG 337
E EE + + G
Sbjct: 558 PEIFEELAQRAKFSG 572
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+V S+ ++ F + ME E +++M G P+ Y L+ F + K+ +L
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+EM+ KG D YN +I E + +M +E + TF ++ Y
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
+ + V+ +M++K P+ ++ +LI GL + + EA + M D
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE-MLDKGMKTPLI 543
Query: 415 SYELLIKRLCEDGQME--EALKLQAKMAGK 442
Y GQ E E L +AK +GK
Sbjct: 544 DYNKFAADFHRGGQPEIFEELAQRAKFSGK 573
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
+++++ L K +I++ +++S+G P +R+ ++I CK S I E F
Sbjct: 336 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDF--CKQSSMETAI--EYF- 390
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
D L+PD + L+ GF +++ + E+ EM+ G P+ +YN L+ L
Sbjct: 391 --DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 448
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
+ +++ +M + + +N I+ ++ + E + EM G+ +
Sbjct: 449 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDN 508
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
++ LI G G A ++ML K +
Sbjct: 509 SYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 171/407 (42%), Gaps = 36/407 (8%)
Query: 57 RSLLYSTKTLTPIHFSQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRA 116
++L S+ LT +I +L+ A RFF + H+ +Y+ ++ ILS
Sbjct: 12 KALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYS-HEPIAYNEMIDILSST 70
Query: 117 RLKVQALSIIKSAL--VSRCLFDCNNAPVKFFEMLLKTYRQ-CDSAPFVFDLLIKSCLEL 173
+ K + I+ L + R NN V ++LL+ R+ C+ + ++ +
Sbjct: 71 KYKNKQFRIVIDMLDYMKR-----NNKTVVLVDVLLEILRKYCER----YLTHVQKFAKR 121
Query: 174 KKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL 233
K+I + P+I N+L+ + KC G + R + + R+
Sbjct: 122 KRIRVKTQ-----------PEINAFNMLLDALCKCGLVKEGEALLRRM--------RHRV 162
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+PD ++FN L G+ R + + ++ EM G P ++Y + FC G + EA
Sbjct: 163 KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAAD 222
Query: 294 LWEEMRVKGLRLDVTAYNT---IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLIN 350
L++ M KG + T +I K+ + E+ E M G + T++ +I
Sbjct: 223 LFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIE 282
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC 410
G C VD A +M K + P+ T + LCE ++ EAL++ M +
Sbjct: 283 GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY-GRMVESRCA 341
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
PS ++Y +LI E + A +M + D++ Y A I G
Sbjct: 342 PSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMING 388
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P +F +++ ++ + E E+ M GC+P++ +Y ++ C K+ EA K
Sbjct: 237 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 296
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+EM KG D+ YN + ++ + ++A + + M + T+ LI+ + +
Sbjct: 297 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 356
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
+ D D A + +M ++D + T +I GL + R EA ++ + P R
Sbjct: 357 MDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYR- 415
Query: 415 SYELLIKRLCEDGQMEEALKLQAKM 439
++ + RL E G ++ K+ M
Sbjct: 416 VFDSFLMRLSEVGNLKAIHKVSEHM 440
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 12/215 (5%)
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
VP+L +YN LM C ++ +A KL +MR +G DV + T+IGG+ + ++E A +
Sbjct: 159 VPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHK 218
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML-----QKDFRPEASTIGML 383
F EM + G+ NS+T LI G+ K+ DV++ + K++ + D +A+ L
Sbjct: 219 VFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANL 278
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRK---SYELLIKRLCEDGQMEEALKLQAKMA 440
++ +C + ++ EI N +S C S +Y +I LC + A ++ M
Sbjct: 279 VDSMCREGYFNDIFEIAEN----MSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 441 GKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
KG +P Y+A I G K G A L+ E S
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 134/296 (45%), Gaps = 20/296 (6%)
Query: 159 APFVFDLLIKS-CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCA---G 214
+ + + LL++S C EL + MLR G + + R N+ + +G C
Sbjct: 376 SEYTYKLLMESLCKELDTGKARNVLELMLRKEG-ADRTRIYNIYL------RGLCVMDNP 428
Query: 215 YGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM--ERFGCVPNL 272
I + + GD RPD ++ N ++ G + G ++ +V ++M +F C P+
Sbjct: 429 TEILNVLVSMLQGDC----RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF-CAPDA 483
Query: 273 YSYNILMALFCGEGKMREA-EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
+ N +M +G+ EA + L M ++ V AYN +I G +K + ++A F
Sbjct: 484 VTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFG 543
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKK 391
++E V ++S T+ +I+G C VD A + D++ R +A ++GLC+
Sbjct: 544 QLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSG 603
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+S+A + + + D P+ Y +I G EA ++ +M G PD
Sbjct: 604 YLSDACHFLYD-LADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPD 658
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 11/296 (3%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
+I S + + D + + + G P RTCN++I+ + + + G+ + G
Sbjct: 96 VIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGF- 154
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
K P + ++N LM + ++ +M G +P++ ++ L+ +C
Sbjct: 155 ----KKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEI 210
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNS-- 342
++ A K+++EMRV G+R + + +IGGF K +E + KE+ E E+++
Sbjct: 211 RELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSM 270
Query: 343 --VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
F +L++ C+ G + + ++M + G +I+ LC +R A I+
Sbjct: 271 KAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIV 330
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
M+ P R SY +I LC+DG A +L + + F P Y +E
Sbjct: 331 Y-IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLME 385
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 1/226 (0%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L+P S+N ++ G +DG ++ E F P+ Y+Y +LM C E +A
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+ E M K YN + G + M G + T +ING
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 353 CKVGDVDSAILVYKDMLQKDF-RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
CK+G VD A+ V DM+ F P+A T+ ++ GL + R EAL+++ M + P
Sbjct: 458 CKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKP 517
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+Y +I+ L + + +EA+ + ++ D Y I+G
Sbjct: 518 GVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/252 (17%), Positives = 108/252 (42%), Gaps = 11/252 (4%)
Query: 134 CLFDCNNAPVKFFEMLLKTYR-QCDSAPFVFDLLIKSCLELKKIDGSIEIVR-MLRSRGI 191
C+ D P + +L+ + C + + +I ++ ++D +++++ M+ +
Sbjct: 423 CVMD---NPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFC 479
Query: 192 SPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
+P T N ++ + + + + + +++P V ++N ++ G ++
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVM------PENKIKPGVVAYNAVIRGLFKLH 533
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
+ + V+ ++E+ + +Y I++ C K+ A+K W+++ R D Y
Sbjct: 534 KGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYA 593
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
+ G +SG + A F ++ G N V + +I + G A + ++M +
Sbjct: 594 AFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKN 653
Query: 372 DFRPEASTIGML 383
P+A T +L
Sbjct: 654 GQAPDAVTWRIL 665
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 12/234 (5%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCL-----ELKKIDGSIEIVRMLRSRGISPQIRT 197
VK ++++ Y Q F D+L + + L K D ++ + G SP + T
Sbjct: 235 VKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYT 294
Query: 198 CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIE 257
N+L+ +A A + + +V + P V F L+ G R G++E +
Sbjct: 295 YNILLHHLATGNKPLAALNLLNHM-------REVGVEPGVIHFTTLIDGLSRAGKLEACK 347
Query: 258 EVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF 317
+E + GC P++ Y +++ + G++ +AE++++EM KG +V YN++I GF
Sbjct: 348 YFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGF 407
Query: 318 YKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
+G+ ++A KEME G N V + L+N G V A V KDM++K
Sbjct: 408 CMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PDV ++N +M +R G+ + + + +EM + G P+LY+YNIL+ K A L
Sbjct: 255 PDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNL 314
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
MR G+ V + T+I G ++G++E + F E G + V + +I GY
Sbjct: 315 LNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYIS 374
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
G+++ A ++K+M +K P T +I G C + EA +++ M P+
Sbjct: 375 GGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKE-MESRGCNPNFV 433
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKG 443
Y L+ L G++ EA ++ M KG
Sbjct: 434 VYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 1/236 (0%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
+FN L+ G + E + + + F P +SYN ++ G + + + ++E+M
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
G DV YN ++ ++ G+ ++ EM G + T+ L++
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
+A+ + M + P LI+GL ++ EA + + V P Y +
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYFMDETVKVGCTPDVVCYTV 367
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+I G++E+A ++ +M KG P++ Y++ I G+ G + A L+ EM
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE-GKMREA 291
R + ++ LM F GE + + + +EM + G ++N+L+ CGE G R+
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICT-CGEAGLARDV 206
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+ + + + R +YN I+ Q + + +++M G + +T+ ++
Sbjct: 207 VEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFA 266
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
++G D + +M++ F P+ T +L+ L + AL ++ N MR+V P
Sbjct: 267 NFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLL-NHMREVGVEP 325
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
+ LI L G++E + G PD+ Y I GY G + A +
Sbjct: 326 GVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF 385
Query: 472 MEMS 475
EM+
Sbjct: 386 KEMT 389
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 142/295 (48%), Gaps = 10/295 (3%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
+IE+ S G+ + N L+ C+ + A + +F + G+ + D
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAA----KSVFNAKKGN----IPFDSC 256
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
S+N ++ G+ + GE+E +E+V EM G P+ SY+ L+ G++ ++ ++++ +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
+ KG D YN +I F + +++ +++ M E N T+ L++G K V
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
A+ ++++ML + P + ++ LC A+ +I R S +Y+L
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAM-VIYQKSRKAGCRISESAYKL 435
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
L+KRL G+ L + +M G+ D+++Y+ ++G +G+ + A L+ME
Sbjct: 436 LLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLE-NAVLVME 489
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 3/244 (1%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
+ PD+ M F R + E++ E E FG + S+N L+ C + A+
Sbjct: 182 VNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAK 241
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
++ + + D +YN +I G+ K G++E+ E+ KEM G + +++ HLI G
Sbjct: 242 SVFNAKK-GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGL 300
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+ G ++ ++ ++ ++ K P+A+ +I + E++ R M D P+
Sbjct: 301 GRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRR-MLDEECEPN 359
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
++Y L+ L + ++ +AL++ +M +G P + +F++ G AA +I
Sbjct: 360 LETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH-AAMVIY 418
Query: 473 EMSR 476
+ SR
Sbjct: 419 QKSR 422
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
DV S++ ++ R + +V M G P+L I M F +R A +L+
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
EE G++ ++N ++ + + A+ F + G + +S ++ +I+G+ K+
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSCSYNIMISGWSKL 268
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G+V+ V K+M++ F P+ + LIEGL R+++++EI N ++ P
Sbjct: 269 GEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDN-IKHKGNVPDANV 327
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
Y +I +E+++ +M + EP+L+ Y + G K
Sbjct: 328 YNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIK 372
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 103/244 (42%), Gaps = 27/244 (11%)
Query: 143 VKFFEMLLKTYRQCDSAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNL 200
V+ E +LK + P + LI+ +I+ S+EI ++ +G P N
Sbjct: 271 VEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNA 330
Query: 201 LISCVAKCKGSCAGYGIFREIFGLRDGDSKVRL---------RPDVHSFNDLMMGFYRDG 251
+I RD D +R P++ +++ L+ G +
Sbjct: 331 MIC----------------NFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGR 374
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
++ E++ EM G +P + C G A ++++ R G R+ +AY
Sbjct: 375 KVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYK 434
Query: 312 TIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
++ + G+ + EM+ G S+ +E++++G C +G +++A+LV ++ ++K
Sbjct: 435 LLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRK 494
Query: 372 DFRP 375
F P
Sbjct: 495 GFCP 498
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 46/333 (13%)
Query: 138 CNNAPVKF--------------FEMLLKTYRQCD---SAPFVFDLLI---KSCLE----- 172
CNNA F ++++LKT+ + D A VF+ L+ KS L+
Sbjct: 190 CNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKM 249
Query: 173 ------LKKIDGSIEIVRMLRS----RGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
+ K G+ E R + S +G+ T N L+S ++E+
Sbjct: 250 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS----------YKEVS 299
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
+ D + ++PDV S+ L+ + R E V+ EM G P +YNIL+ F
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
G + +A+ +++ MR + D+ +Y T++ + + +E AE+FFK +++ G E N
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
VT+ LI GY K DV+ + VY+ M + + + +++ K AL +
Sbjct: 420 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 479
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
M P +K+ +L+ ++EEA +L
Sbjct: 480 -MESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 7/233 (3%)
Query: 229 SKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM 288
SK+ P+V S+ LM + R G+ E ++ M+ G P+ +Y I++ F K
Sbjct: 166 SKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKF 225
Query: 289 REAEKLWEEM---RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
+EAE+++E + + L+ D Y+ +I + K+G EKA + F M GV ++VT+
Sbjct: 226 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 285
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
L++ +V +Y M + D +P+ + +LI+ +R EAL + M
Sbjct: 286 NSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE-ML 341
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
D P+ K+Y +L+ G +E+A + M PDL Y + Y
Sbjct: 342 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 394
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 7/237 (2%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
L+ + + G E V + + + G PN+ SY LM + GK AE ++ M+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM---ELGGVESNSVTFEHLINGYCKVGDVD 359
Y I+ F + + ++AEE F+ + + ++ + + +I Y K G+ +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
A V+ M+ K T L+ K VS+ I + M+ P SY LL
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK----IYDQMQRSDIQPDVVSYALL 320
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
IK + EEAL + +M G P K Y+ ++ + G + A T+ M R
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 46/333 (13%)
Query: 138 CNNAPVKF--------------FEMLLKTYRQCD---SAPFVFDLLI---KSCLE----- 172
CNNA F ++++LKT+ + D A VF+ L+ KS L+
Sbjct: 197 CNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKM 256
Query: 173 ------LKKIDGSIEIVRMLRS----RGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
+ K G+ E R + S +G+ T N L+S ++E+
Sbjct: 257 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS----------YKEVS 306
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
+ D + ++PDV S+ L+ + R E V+ EM G P +YNIL+ F
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
G + +A+ +++ MR + D+ +Y T++ + + +E AE+FFK +++ G E N
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
VT+ LI GY K DV+ + VY+ M + + + +++ K AL +
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 486
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
M P +K+ +L+ ++EEA +L
Sbjct: 487 -MESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 7/233 (3%)
Query: 229 SKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM 288
SK+ P+V S+ LM + R G+ E ++ M+ G P+ +Y I++ F K
Sbjct: 173 SKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKF 232
Query: 289 REAEKLWEEM---RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
+EAE+++E + + L+ D Y+ +I + K+G EKA + F M GV ++VT+
Sbjct: 233 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 292
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
L++ +V +Y M + D +P+ + +LI+ +R EAL + M
Sbjct: 293 NSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE-ML 348
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
D P+ K+Y +L+ G +E+A + M PDL Y + Y
Sbjct: 349 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 401
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 7/237 (2%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
L+ + + G E V + + + G PN+ SY LM + GK AE ++ M+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM---ELGGVESNSVTFEHLINGYCKVGDVD 359
Y I+ F + + ++AEE F+ + + ++ + + +I Y K G+ +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELL 419
A V+ M+ K T L+ K VS+ I + M+ P SY LL
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK----IYDQMQRSDIQPDVVSYALL 327
Query: 420 IKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
IK + EEAL + +M G P K Y+ ++ + G + A T+ M R
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 155/368 (42%), Gaps = 54/368 (14%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
K F +++K D F+F +++ C ++ I ++ G+S +R N ++
Sbjct: 166 AKLFRLMMKDGVLPDD--FLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL 223
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
+ AKC FR ++R R DV ++N +++ + ++G+ E E+ E
Sbjct: 224 AVYAKCGELDFATKFFR----------RMRER-DVIAWNSVLLAYCQNGKHEEAVELVKE 272
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
ME+ G P L ++NIL+ + GK A L ++M G+ DV + +I G +G
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 323 IEKAEEFFKEMELGGVESNSVTF-----------------------------------EH 347
+A + F++M L GV N+VT
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV 407
L++ Y K G ++ A V+ + KD T +I G C+ +A E+ M+D
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKD----VYTWNSMITGYCQAGYCGKAYELF-TRMQDA 447
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG-FEPDLKIYDAFIEGYKKLGNDQM 466
+ P+ ++ +I ++G EA+ L +M G + + ++ I GY + G
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 467 AATLIMEM 474
A L +M
Sbjct: 508 ALELFRKM 515
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 155/363 (42%), Gaps = 67/363 (18%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+++LI +L K D ++++++ + + GI+ + T +IS + +FR++
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 222 FGLRDGDSKVRLRP---------------DVHSFNDLMMGFYRD--------------GE 252
F + V + +VHS + MGF D G+
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA-VKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+E +V++ ++ ++Y++N ++ +C G +A +L+ M+ LR ++ +NT
Sbjct: 403 LEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGG-VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
+I G+ K+G +A + F+ ME G V+ N+ T+ +I GY + G D A+ +++ M
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518
Query: 372 DFRPEASTIGMLIEGL--------------CEKKRVSEALEIIRNAMRDVSFCPSRK--- 414
F P + TI L+ C +R +A+ ++NA+ D ++ S
Sbjct: 519 RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTD-TYAKSGDIEY 577
Query: 415 --------------SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
++ LI G AL L +M +G P+ + I +
Sbjct: 578 SRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL 637
Query: 461 LGN 463
+GN
Sbjct: 638 MGN 640
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 149/346 (43%), Gaps = 37/346 (10%)
Query: 120 VQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFV--------------FDL 165
V+A +I S ++ + C ++ +L Y +C F ++
Sbjct: 197 VEAGKVIHSVVIKLGMSSC----LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFR--EIFG 223
++ + + K + ++E+V+ + GISP + T N+LI + A + + E FG
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL-F 282
+ DV ++ ++ G +G +++ +M G VPN + I+ A+
Sbjct: 313 IT---------ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN--AVTIMSAVSA 361
Query: 283 CGEGKMREAEKLWEEMRVK-GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C K+ + VK G DV N+++ + K G++E A + F ++ +
Sbjct: 362 CSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKD 417
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
T+ +I GYC+ G A ++ M + RP T +I G + EA+++ +
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+D + ++ L+I ++G+ +EAL+L KM F P+
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 133/346 (38%), Gaps = 53/346 (15%)
Query: 167 IKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRD 226
+ +C LK I+ E+ + G + N L+ +KC +F +
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV----- 413
Query: 227 GDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG 286
DV+++N ++ G+ + G E++ M+ PN+ ++N +++ + G
Sbjct: 414 ------KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 287 KMREAEKLWEEMRVKG-LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
EA L++ M G ++ + +N II G+ ++G+ ++A E F++M+ NSVT
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTI 527
Query: 346 -----------------------------------EHLINGYCKVGDVDSAILVYKDMLQ 370
L + Y K GD++ + ++ M
Sbjct: 528 LSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME 430
KD S IG G AL + N M+ P+R + +I G ++
Sbjct: 588 KDIITWNSLIG----GYVLHGSYGPALALF-NQMKTQGITPNRGTLSSIILAHGLMGNVD 642
Query: 431 EALKLQAKMAGK-GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
E K+ +A P L+ A + Y + + A I EM+
Sbjct: 643 EGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMN 688
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L+PD+ + N ++ G R + ++++ M+ G PN+ SY I++ FC + M A
Sbjct: 329 LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+ +++M GL+ D Y +I GF +++ E KEM+ G + T+ LI
Sbjct: 389 EYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLM 448
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+ +Y M+Q + P T M+++ R E + + M CP
Sbjct: 449 ANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF-VARNYEMGRAVWDEMIKKGICPD 507
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQM 466
SY +LI+ L +G+ EA + +M KG + L Y+ F + + G ++
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
+++F+ ++ + Q D+A V+ LI KK+D E+++ ++ +G P +T N LI
Sbjct: 388 IEYFDDMVDSGLQPDAA--VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
+A K G I+ ++ + + P +H+FN +M ++ EM VW+E
Sbjct: 446 KLMANQKMPEHGTRIYNKMI-------QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 498
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M + G P+ SY +L+ EGK REA + EEM KG++ + YN F++ GQ
Sbjct: 499 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Query: 323 IEKAEEFFKEMELGG 337
E EE + + G
Sbjct: 559 PEIFEELAQRAKFSG 573
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 165/390 (42%), Gaps = 33/390 (8%)
Query: 85 ALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVK 144
A RFF + + H +Y++++ IL++ R +S+++
Sbjct: 178 AFRFFCWAAERQGFA-HASRTYNSMMSILAKTRQFETMVSVLE----------------- 219
Query: 145 FFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
EM K ++ F + +K+ K+ ++ I +++ + T N L+
Sbjct: 220 --EMGTKGLLTMET----FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDS 273
Query: 205 VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEME 264
+ + K +F ++ K R P++ ++ L+ G+ R + +WN+M
Sbjct: 274 LGRAKLGKEAQVLFDKL--------KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
G P++ ++N+++ K +A KL+ M+ KG +V +Y +I F K +E
Sbjct: 326 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 385
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
A E+F +M G++ ++ + LI G+ +D+ + K+M +K P+ T LI
Sbjct: 386 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF 444
+ L +++ E I N M PS ++ +++K E + +M KG
Sbjct: 446 K-LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 504
Query: 445 EPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
PD Y I G G + A + EM
Sbjct: 505 CPDDNSYTVLIRGLISEGKSREACRYLEEM 534
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+V S+ ++ F + ME E +++M G P+ Y L+ F + K+ +L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+EM+ KG D YN +I E + +M +E + TF ++ Y
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
+ + V+ +M++K P+ ++ +LI GL + + EA + M D
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE-MLDKGMKTPLI 544
Query: 415 SYELLIKRLCEDGQME--EALKLQAKMAGK 442
Y GQ E E L +AK +GK
Sbjct: 545 DYNKFAADFHRGGQPEIFEELAQRAKFSGK 574
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
+++++ L K +I++ +++S+G P +R+ ++I CK S I E F
Sbjct: 337 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDF--CKQSSMETAI--EYF- 391
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
D L+PD + L+ GF +++ + E+ EM+ G P+ +YN L+ L
Sbjct: 392 --DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
+ +++ +M + + +N I+ ++ + E + EM G+ +
Sbjct: 450 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDN 509
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
++ LI G G A ++ML K +
Sbjct: 510 SYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 163 FDLLIKSCLELKKIDGSIEI-VRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ L+ +CL K + + + M + GI P + T N +I + + + + Y I E+
Sbjct: 149 LNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEM 208
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ ++P SF ++ GFY++ + + + +V M+ FG + +YNI++
Sbjct: 209 -------ERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
C K EA+ L + + +R + Y+ +I GF +++A F+ M G + +
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
S + LI+ CK GD ++A+++ ++ ++K++ P S + L+ GL + +V EA E+I
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 7/267 (2%)
Query: 176 IDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRP 235
+D SI+ R L I +++ N L+ K ++ E+ + + P
Sbjct: 127 LDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG------IEP 180
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D+ ++N ++ G + EMER P S+ +++ F E K E K+
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
M G+ + V YN +I K + +A+ + + NSVT+ LI+G+C
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
++D A+ +++ M+ ++P++ LI LC+ AL + R +M + ++ PS
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM-EKNWVPSFSV 359
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGK 442
+ L+ L +++EA +L A + K
Sbjct: 360 MKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 10/305 (3%)
Query: 173 LKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVR 232
LK + I+ + RS +SP ++ S + A F + L DG + +
Sbjct: 49 LKSENNPDRILEICRSTSLSPDYHVDRIIFSVAV---VTLAREKHFVAVSQLLDGFIQNQ 105
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIE---EVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
P SF + Y G M++ + + +E++ + S N L+ +
Sbjct: 106 PDPKSESFAVRAIILY--GRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYK 163
Query: 290 EAEKLWEEM-RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
EA +++ EM ++ G+ D+ YN +I +SG + EME ++ + +F +
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS 408
I+G+ K D V + M + +T ++I+ LC++K+ +EA +I M
Sbjct: 224 IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVM-SCR 282
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAA 468
P+ +Y LLI C + ++EA+ L M G++PD + Y I K G+ + A
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETAL 342
Query: 469 TLIME 473
L E
Sbjct: 343 ILCRE 347
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N++I K K +F+ G+++ + PD ++N L ++ +
Sbjct: 519 NVMIKAYGKAKLHEKALSLFK---GMKNQGT----WPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
+ EM GC P +Y ++A + G + +A L+E M G++ + Y ++I GF
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
+SG +E+A ++F+ ME GV+SN + LI Y KVG ++ A VY M + P+ +
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 379 TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAK 438
++ + VSEA E I NA+R+ C S+ ++ G ++EA+++ +
Sbjct: 692 ASNSMLSLCADLGIVSEA-ESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 439 MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
M G D ++ + Y G L EM
Sbjct: 750 MRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 146/358 (40%), Gaps = 45/358 (12%)
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCN 199
N F +LK+ D+ F+ +I +C + + +++ + +GISP +T N
Sbjct: 322 NDAANLFSEMLKSGVPIDTV--TFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
+L+S A A +R+I KV L PD + ++ + + +E V
Sbjct: 380 ILLSLHADAGDIEAALEYYRKI-------RKVGLFPDTVTHRAVLHILCQRKMVAEVEAV 432
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV------------------K 301
EM+R + +S ++M ++ EG + +A+ L+E ++ K
Sbjct: 433 IAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEK 492
Query: 302 GL-----------------RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
GL R DV YN +I + K+ EKA FK M+ G + T
Sbjct: 493 GLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECT 552
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+ L V VD A + +ML +P T +I +S+A+++ AM
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYE-AM 611
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
P+ Y LI E G +EEA++ M G + + + + I+ Y K+G
Sbjct: 612 EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG 669
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 139/328 (42%), Gaps = 16/328 (4%)
Query: 157 DSAP------FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKG 210
DS+P F+ LI + +++ + + + G+ T N +I
Sbjct: 296 DSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIH------- 348
Query: 211 SCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
+C +G E L + + PD ++N L+ G++E E + ++ + G P
Sbjct: 349 TCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFP 408
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
+ ++ ++ + C + E E + EM +R+D + I+ + G + +A+ F
Sbjct: 409 DTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF 468
Query: 331 KEMELGGVESNSVTFEHLINGYCKVG-DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
+ +L V S S T +I+ Y + G V++ + Y R + ++I+ +
Sbjct: 469 ERFQLDCVLS-STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGK 527
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
K +AL + + M++ P +Y L + L ++EA ++ A+M G +P K
Sbjct: 528 AKLHEKALSLFK-GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 450 IYDAFIEGYKKLGNDQMAATLIMEMSRT 477
Y A I Y +LG A L M +T
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKT 614
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
R DV +N ++ + + E ++ M+ G P+ +YN L + G + EA++
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+ EM G + Y +I + + G + A + ++ ME GV+ N V + LING+
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ G V+ AI ++ M + + + LI+ + + EA + + M+D P
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVY-DKMKDSEGGPDV 690
Query: 414 KSYELLIKRLCED-GQMEEALKLQAKMAGKG 443
+ ++ LC D G + EA + + KG
Sbjct: 691 AASNSMLS-LCADLGIVSEAESIFNALREKG 720
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 111/261 (42%), Gaps = 37/261 (14%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+V +N ++ R G+ + + W EM G +P +Y +L+ ++ G ++EA L
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEA-LL 201
Query: 295 WEEMRVKGLRL---DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
W ++ G R+ D T++ F SG+ ++A+ FFK G V+ + + I+
Sbjct: 202 W--IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS----IDD 255
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEA------------------------STIGMLIEGL 387
+ K G S + + + + + F+ A ST LI+
Sbjct: 256 FPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLY 315
Query: 388 CEKKRVSEALEIIRNAMRDVSFCP-SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
+ R+++A + ++ S P ++ +I G + EA L KM KG P
Sbjct: 316 GKAGRLNDAANLFSEMLK--SGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISP 373
Query: 447 DLKIYDAFIEGYKKLGNDQMA 467
D K Y+ + + G+ + A
Sbjct: 374 DTKTYNILLSLHADAGDIEAA 394
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/420 (19%), Positives = 167/420 (39%), Gaps = 56/420 (13%)
Query: 90 FFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKS-----ALVSRCLFDCNNAPVK 144
F+ N S +D+ Y+ ++ +A+L +ALS+ K C ++ +
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLA 561
Query: 145 FFEMLLKTYR--------QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIR 196
+++ + R C + +I S + L + ++++ + G+ P
Sbjct: 562 GVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEV 621
Query: 197 TCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMI 256
LI+ A+ G+ E + ++ + L+ + + G +E
Sbjct: 622 VYGSLINGFAES-------GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Query: 257 EEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG 316
V+++M+ P++ + N +++L G + EAE ++ +R KG DV ++ T++
Sbjct: 675 RRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYL 733
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML-QKDFRP 375
+ G +++A E +EM G+ S+ +F ++ Y G + ++ +ML ++
Sbjct: 734 YKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLL 793
Query: 376 EASTIGMLIEGLCEKKRVSEALEIIRNAMRD-----------------------VSFCPS 412
+ T L L + SEA+ ++ A + + C
Sbjct: 794 DWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQE 853
Query: 413 RKS---------YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG-YKKLG 462
S Y +I G ++ ALK +M KG EPD+ + A++ G Y K G
Sbjct: 854 LTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDI-VTQAYLVGIYGKAG 912
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 14/256 (5%)
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIE----IVRMLRSRGISPQI 195
N VK F+ +LK+ Q + P LI + D SI ++ ++ + G+ P
Sbjct: 102 NDTVKLFQHILKS--QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQ 159
Query: 196 RTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEM 255
T ++ + + + + +E+ ++ PD +++N L+ + ++ +
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKEL-------TEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 256 IEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTII 314
+ E +EM + F P+L S+ IL+ C +REA L ++ G + D YNTI+
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIM 272
Query: 315 GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
GF + +A +K+M+ GVE + +T+ LI G K G V+ A + K M+ +
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE 332
Query: 375 PEASTIGMLIEGLCEK 390
P+ +T L+ G+C K
Sbjct: 333 PDTATYTSLMNGMCRK 348
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 6/193 (3%)
Query: 164 DLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFG 223
D+ ++S E ++D + ++++ L + P T N L+ + KCK Y E
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDE--- 219
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
+RD ++PD+ SF L+ + + +++ G P+ + YN +M FC
Sbjct: 220 MRD---DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
K EA ++++M+ +G+ D YNT+I G K+G++E+A + K M G E ++
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 344 TFEHLINGYCKVG 356
T+ L+NG C+ G
Sbjct: 337 TYTSLMNGMCRKG 349
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 4/237 (1%)
Query: 229 SKVRLRPDVHSFNDLMMGFYR--DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG 286
S+ RP +F L+ R D + + V N M G P+ + +I + C G
Sbjct: 114 SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETG 173
Query: 287 KMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG-GVESNSVTF 345
++ EA+ L +E+ K D YN ++ K + EF EM V+ + V+F
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
LI+ C ++ A+ + + F+P+ +++G C + SEA+ + + M+
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK-MK 292
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+ P + +Y LI L + G++EEA M G+EPD Y + + G + G
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%)
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
I M G+E + VT + + C+ G VD A + K++ +K P+ T
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
L++ LC+ K + E + D P S+ +LI +C + EA+ L +K+
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
GF+PD +Y+ ++G+ L A + +M
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 173/389 (44%), Gaps = 46/389 (11%)
Query: 27 STPPSDQSHIVSTVVSLLIHHRSKSR--W-TNLRSLLYSTKTLTPIHFSQIALQLKSNPH 83
ST S S +S + ++ K+R W ++ S L + +TP +++ L+L ++
Sbjct: 81 STVISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEV-LKLGNDAA 139
Query: 84 LALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPV 143
+A +FF + HD +Y+ + L+R ++A L D P
Sbjct: 140 VAAKFFHWAGKQKGY-KHDFAAYNAFAYCLNRN-------GHFRAADQLPELMDSQGRPP 191
Query: 144 --KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLL 201
K FE+L++ + V+ + K ++ G P++ N +
Sbjct: 192 SEKQFEILIRMHADNRRGLRVYYVYEK-----------------MKKFGFKPRVFLYNRI 234
Query: 202 ISCVAKCKG----SCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIE 257
+ + K G + A Y F+E DG L + +F L+ G + G +E +
Sbjct: 235 MDALVK-NGYFDLALAVYEDFKE-----DG-----LVEESTTFMILVKGLCKAGRIEEML 283
Query: 258 EVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF 317
E+ M C P++++Y ++ EG + + ++W+EMR ++ DV AY T++ G
Sbjct: 284 EILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGL 343
Query: 318 YKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
K G++E+ E F EM+ + + + LI G+ G V SA +++D++ + +
Sbjct: 344 CKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADI 403
Query: 378 STIGMLIEGLCEKKRVSEALEIIRNAMRD 406
+I+GLC +V +A ++ + A+ +
Sbjct: 404 GIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D ++N R+G +++ M+ G P+ + IL+ + + ++
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
E+M+ G + V YN I+ K+G + A +++ + G+ S TF L+ G CK
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G ++ + + + M + +P+ +I+ L + + +L + RD P +
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRD-EIKPDVMA 335
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
Y L+ LC+DG++E +L +M GK D +IY IEG+ G + A L
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L PD + + +M+ + + V + G + Y L E K A
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMAL 493
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
++ ++ KG V+ YN ++ YK G I+K+ F EM G E +S ++ I +
Sbjct: 494 DVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+ GDV +A ++ +++ P + L +GLC+ + + ++R + +V P
Sbjct: 553 VEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPM 612
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
Y L + +C+ E+ +K+ +M +G + IY A I G K G ++A +
Sbjct: 613 EFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFT 672
Query: 473 EMSRTQ 478
E+ + +
Sbjct: 673 ELKKRK 678
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
+ +YN G R A++L E M +G + +I + + + +
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
++M+ G + + +++ K G D A+ VY+D + E++T +L++GLC+
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
R+ E LEI++ MR+ P +Y +IK L +G ++ +L++ +M +PD+
Sbjct: 277 GRIEEMLEILQR-MRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMA 335
Query: 451 YDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
Y + G K G + L MEM Q
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQ 363
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D S+N ++ G+ R GEME E++ M N S+N +++ + G + +A +
Sbjct: 68 DAASWNTMITGYARRGEMEKARELFYSMME----KNEVSWNAMISGYIECGDLEKASHFF 123
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+ V+G V A+ +I G+ K+ ++E AE FK+M V N VT+ +I+GY +
Sbjct: 124 KVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVEN 176
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVS---FCPS 412
+ + +++ ML++ RP +S + + G E AL++ R + VS C
Sbjct: 177 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE----LSALQLGRQIHQIVSKSTLCND 232
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
+ LI C+ G++ +A KL M K D+ ++A I GY + GN A L
Sbjct: 233 VTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFR 288
Query: 473 EM 474
EM
Sbjct: 289 EM 290
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 239 SFNDLMMGFYRD-GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
++N L++G +D M ++++E+ P+ +SYNI+++ + +A+ ++
Sbjct: 8 TWNSLLIGISKDPSRMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDR 63
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
M K D ++NT+I G+ + G++EKA E F M +E N V++ +I+GY + GD
Sbjct: 64 MPFK----DAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGD 115
Query: 358 VDSAILVYKDMLQKDFRPEASTIGM--LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
++ A +K P + +I G + K+V E+ +D++ + +
Sbjct: 116 LEKASHFFK------VAPVRGVVAWTAMITGYMKAKKV----ELAEAMFKDMTVNKNLVT 165
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+ +I E+ + E+ LKL M +G P+
Sbjct: 166 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 197
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
DVTA ++I + K G++ A + F+ M+ + + V + +I+GY + G+ D A+ ++
Sbjct: 232 DVTALTSLISMYCKCGELGDAWKLFEVMK----KKDVVAWNAMISGYAQHGNADKALCLF 287
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
++M+ RP+ T ++ V+ + + +RD P Y ++ L
Sbjct: 288 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 347
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
G++EEALKL M F P ++ + + N ++A
Sbjct: 348 AGKLEEALKLIRSMP---FRPHAAVFGTLLGACRVHKNVELA 386
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 167/425 (39%), Gaps = 79/425 (18%)
Query: 101 HDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAP 160
+D+Y+Y+ + ILSRAR +++ L SRC +P
Sbjct: 104 NDMYAYNAMASILSRARQNASLKALVVDVLNSRCFM----------------------SP 141
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGIS-PQIRTCNLLISCVAKCKGSCAGYGIFR 219
F I+ +D + + +R G+ P T N L+ ++K S +
Sbjct: 142 GAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVEL-VEA 200
Query: 220 EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILM 279
+ +RD D + ++ + G+ E V+NE+ G + S IL+
Sbjct: 201 RLKEMRD----CGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILV 255
Query: 280 ALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE 339
FC G++ +A +L E + + +RL+ Y +I GF K +I+KA + F++M G+
Sbjct: 256 VSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMN 315
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI--------------- 384
++ ++ LI G CK D++ A+ +Y ++ + P+ +G L+
Sbjct: 316 ADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEV 375
Query: 385 ------------------EGLCEKKRVSEALEIIRNAM-----------------RDVSF 409
EG V EA I+N M + +
Sbjct: 376 IIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAI 435
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
P S ++I L + +++ A+ L + G P +Y+ IEG K G + +
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK 495
Query: 470 LIMEM 474
L+ EM
Sbjct: 496 LLGEM 500
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 139/339 (41%), Gaps = 45/339 (13%)
Query: 177 DGSIEIVRMLR--SRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
DG EIV++L+ ++ I P + +++I+C+ K + +I +++G L
Sbjct: 419 DGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDI--VQNG-----LI 471
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN------------------ 276
P +N+++ G ++G E ++ EM+ G P+ ++ N
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 277 -----------------ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
L+ C G+ +A K +++ +G + A I G K
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIK 591
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+ +++ E F+++ G + + + LI CK A +++ +M+ K +P +T
Sbjct: 592 NEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVAT 651
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
+I+G C++ + L I D P +Y LI LC G+ EA+ +M
Sbjct: 652 YNSMIDGWCKEGEIDRGLSCIVRMYEDEK-NPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
GK P+ + A I+G K G A EM +
Sbjct: 711 KGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKE 749
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 228 DSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGK 287
D + PD S + ++ + +++M + +++ + G +P YN ++ C EG+
Sbjct: 430 DHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGR 489
Query: 288 MREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
E+ KL EM+ G+ N I G + A + K+M G E
Sbjct: 490 SEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF 549
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV 407
L+ C+ G A D+ + F I+GL + + V LE+ R+ +
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN- 608
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
CP +Y +LIK LC+ + EA L +M KG +P + Y++ I+G+ K G
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 468 ATLIMEMSRTQK 479
+ I+ M +K
Sbjct: 669 LSCIVRMYEDEK 680
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 119/249 (47%), Gaps = 9/249 (3%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
R D++++N + R + ++ + ++ C + ++ + G + EA
Sbjct: 103 RNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASS 162
Query: 294 LWEEMRVKGLRL-DVTAYNTIIGGFYKSGQ--IEKAEEFFKEMELGGVESNSVTFEHLIN 350
+++ +R GL + + YN ++ KS +E E KEM G + T ++
Sbjct: 163 VFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQ 222
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPE-ASTIGMLIEGLCEKKRVSEALEIIRN-AMRDVS 408
YC G + A+ V+ ++L + + E STI L+ C+ +V +A E+I RD+
Sbjct: 223 VYCNTGKSERALSVFNEILSRGWLDEHISTI--LVVSFCKWGQVDKAFELIEMLEERDIR 280
Query: 409 FCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAA 468
+ K+Y +LI ++ ++++A +L KM G D+ +YD I G K + +MA
Sbjct: 281 L--NYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMAL 338
Query: 469 TLIMEMSRT 477
+L +E+ R+
Sbjct: 339 SLYLEIKRS 347
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P + +N ++ GF E V+ +M RFG +P+ +Y LM + L
Sbjct: 817 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 876
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ GL D+ NT+I + A + F EM N VT+ +++ Y K
Sbjct: 877 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMP----HKNLVTWNSILDAYAK 932
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
GDV SA LV+ +M ++D T +I+G ++ ++ALEI MR
Sbjct: 933 SGDVVSARLVFDEMSERD----VVTWSSMIDGYVKRGEYNKALEIFDQMMR 979
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 15/314 (4%)
Query: 162 VFDLLIKS-CLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ +LIK+ C + ++ I M+ S+G+ P + T N +I CK G+
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMV-SKGLKPTVATYNSMID--GWCKEGEIDRGLSCI 672
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ D + PDV ++ L+ G G WNEM+ C PN ++ L+
Sbjct: 673 VRMYEDEKN-----PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
C G EA + EM K + D Y +++ F S I F+EM G
Sbjct: 728 GLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
SV +++ DVD A YK L K P +I G + +++ +
Sbjct: 788 VSVDRNYML-AVNVTSDVDYA---YK-FLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVY 842
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+R P +Y L+K + L + G E DL I + I Y
Sbjct: 843 IQMLR-FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGS 901
Query: 461 LGNDQMAATLIMEM 474
+ A L EM
Sbjct: 902 FRDQASARKLFDEM 915
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M R G P+ +Y IL+ +C GKM+EA++ +EM +G + +I G +G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
+E A+E +M GG + TF LI K G+V+ I +Y + + T
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
LI + + ++ EA ++ N + D P Y +IK +C +G ++A + M K
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVED-GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
P+ +Y I + G AA ++EM+
Sbjct: 387 AHPPNRPVYTMLITMCGRGGKFVDAANYLVEMT 419
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Query: 247 FYRDGEMEMIEEVWNEMER-FGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
+ ++G ++ E++N + + GC + YN L+ C A L M KGL+
Sbjct: 156 YGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKP 215
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
D Y ++ G+ +G++++A+EF EM G + + LI G G ++SA +
Sbjct: 216 DKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMV 275
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
M + F P+ T +LIE + + V +E+ A + + C +Y+ LI + +
Sbjct: 276 SKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACK-LGLCVDIDTYKTLIPAVSK 334
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
G+++EA +L G +P +Y I+G + G
Sbjct: 335 IGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNG 371
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 134/296 (45%), Gaps = 13/296 (4%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLI 202
V+ F + KT C V++ L+ + ++K G+ ++R + +G+ P RT +L+
Sbjct: 166 VELFNGVPKTL-GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILV 224
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
+ G C+ G +E D S+ P + L+ G G +E +E+ ++
Sbjct: 225 N------GWCSA-GKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSK 277
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M + G VP++ ++NIL+ G++ +++ GL +D+ Y T+I K G+
Sbjct: 278 MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
I++A G + + +I G C+ G D A + DM K P M
Sbjct: 338 IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTM 397
Query: 383 LIEGLCEK--KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
LI +C + K V A ++ M ++ P + ++++ L G+ + A++++
Sbjct: 398 LIT-MCGRGGKFVDAANYLVE--MTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIE 450
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Query: 289 REAEKLWEEMR-VKGLRLDVTAYNT--IIGGFYKSGQIEKAEEFFKEM-ELGGVESNSVT 344
++ E +W+ ++ +K L LD++ II + K+G +++A E F + + G +
Sbjct: 125 KKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV 184
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+ L++ C V A + + M++K +P+ T +L+ G C ++ EA E + + M
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFL-DEM 243
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
F P + +LLI+ L G +E A ++ +KM GF PD++ ++ IE K G
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSG 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK-DFRPEASTIGM 382
E + K+M+ ++ + T +I Y K G VD A+ ++ + + +
Sbjct: 128 ESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNS 187
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
L+ LC+ K A +IR +R P +++Y +L+ C G+M+EA + +M+ +
Sbjct: 188 LLHALCDVKMFHGAYALIRRMIRK-GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
GF P + D IEG G + A ++ +M++
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTK 280
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 18/321 (5%)
Query: 157 DSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG 216
D+ D+L K+ KK D E V +R + + ++ VAK AG G
Sbjct: 122 DAYDMAVDILGKA----KKWDRMKEFVERMRGDKL--------VTLNTVAKIMRRFAGAG 169
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
+ E G+ D + L + S N L+ ++ +E V ++ + PN +++N
Sbjct: 170 EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFN 228
Query: 277 ILMALFCGEGKMREAEKLW--EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
I + +C ++ EA LW +EM+ G R V +Y TII + + + K E EME
Sbjct: 229 IFIHGWCKANRVEEA--LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G NS+T+ +++ + + A+ V M + +P++ LI L R+
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF-EPDLKIYDA 453
EA + R M ++ + +Y +I C + ++A++L +M PD+ Y
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 454 FIEGYKKLGNDQMAATLIMEM 474
+ K G+ L+ EM
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEM 427
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWN-EMERFGCVPNLYSYNILMALFCGEGKMREAE 292
+PD +N L+ R G +E E V+ EM G N +YN ++A++C + +A
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 293 KLWEEMRVKGL-RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES-NSVTFEHLIN 350
+L +EM L DV Y ++ +K G + + + KEM S + T+ LI
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
C+ + A ++++M+ +D P T +L+E + +KK + E+ E I + M+ V
Sbjct: 446 RLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEV-KKKNMHESAERIEHIMKTVKL 503
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 18/321 (5%)
Query: 157 DSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG 216
D+ D+L K+ KK D E V +R + + ++ VAK AG G
Sbjct: 122 DAYDMAVDILGKA----KKWDRMKEFVERMRGDKL--------VTLNTVAKIMRRFAGAG 169
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
+ E G+ D + L + S N L+ ++ +E V ++ + PN +++N
Sbjct: 170 EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFN 228
Query: 277 ILMALFCGEGKMREAEKLW--EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
I + +C ++ EA LW +EM+ G R V +Y TII + + + K E EME
Sbjct: 229 IFIHGWCKANRVEEA--LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G NS+T+ +++ + + A+ V M + +P++ LI L R+
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGF-EPDLKIYDA 453
EA + R M ++ + +Y +I C + ++A++L +M PD+ Y
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 454 FIEGYKKLGNDQMAATLIMEM 474
+ K G+ L+ EM
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEM 427
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWN-EMERFGCVPNLYSYNILMALFCGEGKMREAE 292
+PD +N L+ R G +E E V+ EM G N +YN ++A++C + +A
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 293 KLWEEMRVKGL-RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES-NSVTFEHLIN 350
+L +EM L DV Y ++ +K G + + + KEM S + T+ LI
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 351 GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
C+ + A ++++M+ +D P T +L+E + +KK + E+ E I + M+ V
Sbjct: 446 RLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEV-KKKNMHESAERIEHIMKTVKL 503
>AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30148738-30149931 FORWARD
Length = 397
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 45/257 (17%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F++ IKS EL +DG+ +R + G++P + T LIS + K + G G+
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGL----- 234
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
WN M GC PNL ++N+ +
Sbjct: 235 -------------------------------------WNLMVLKGCKPNLTTFNVRIQFL 257
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
+ +A L M + D YN +I GF+ + + AE + M G + N
Sbjct: 258 VNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNL 317
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
++ +I+ CK G+ D A + KD ++K + P T+ ML++GL +K ++ +A I+
Sbjct: 318 KIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMEL 377
Query: 403 AMRDVSFCPSRKSYELL 419
R V P +S +LL
Sbjct: 378 VHRRV---PPFRSKQLL 391
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
L D SK + D SFN + F G ++ EME+ G P++ +Y L++
Sbjct: 164 LHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALY 223
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
+ LW M +KG + ++T +N I + A + M VE +S+
Sbjct: 224 KHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSI 283
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
T+ +I G+ D A VY M K ++P +I LC+ A + ++
Sbjct: 284 TYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDC 343
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
MR + P+ + E+L+K L + GQ+++A
Sbjct: 344 MRK-KWYPNLDTVEMLLKGLVKKGQLDQA 371
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 11/243 (4%)
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
V SFN + + ++ I E ++ ++G + S+NI + FC G + A
Sbjct: 141 VKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAM 200
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF----EHLING 351
EM GL DV Y T+I YK + + M L G + N TF + L+N
Sbjct: 201 REMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNR 260
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
+ D + +L+ M + P++ T M+I+G R + E + AM + P
Sbjct: 261 R-RAWDANDLLLL---MPKLQVEPDSITYNMVIKGFF-LARFPDMAERVYTAMHGKGYKP 315
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
+ K Y+ +I LC+ G + A + K + P+L + ++G K G A + I
Sbjct: 316 NLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKS-I 374
Query: 472 MEM 474
ME+
Sbjct: 375 MEL 377
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 113/242 (46%), Gaps = 12/242 (4%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK- 301
++M + + G + + + M+ +GC ++ S+N + + + + + K
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY-----CKVG 356
G+ +D ++N I F + G ++ A +EME G+ + VT+ LI+ C +G
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+ ++ M+ K +P +T + I+ L ++R +A +++ M + P +Y
Sbjct: 232 NG-----LWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLL-LMPKLQVEPDSITY 285
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
++IK + A ++ M GKG++P+LKIY I K GN +A T+ + R
Sbjct: 286 NMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMR 345
Query: 477 TQ 478
+
Sbjct: 346 KK 347
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 16/299 (5%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
F++L+ C + I+G+ ++R+++ G++ + LIS AK A + +F ++
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
S + ++H+F L+ G R G++ + + P+ +N L++
Sbjct: 529 -------SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 282 FCGE-GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK----SGQIEKAEEFFKEMELG 336
CG+ G + A + EM+ + +D + IG K +GQ+E+A+E ++ +
Sbjct: 582 -CGQSGAVDRAFDVLAEMKAETHPIDPDHIS--IGALMKACCNAGQVERAKEVYQMIHKY 638
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
G+ + +N K GD D A +YKDM +KD P+ LI+ K + EA
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 397 LEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
I+++A + SY L+ C ++AL+L K+ P + +A I
Sbjct: 699 FGILQDA-KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 14/294 (4%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
++ LI SC + K+D E+ + + G+ + T LI CA G +
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALID-------GCARAGQVAKA 556
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM--ERFGCVPNLYSYNILM 279
FG ++PD FN L+ + G ++ +V EM E P+ S LM
Sbjct: 557 FGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALM 616
Query: 280 ALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE 339
C G++ A+++++ + G+R Y + KSG + A +K+M+ V
Sbjct: 617 KACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVT 676
Query: 340 SNSVTFEHLIN--GYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
+ V F LI+ G+ K+ +D A + +D + R + L+ C K +AL
Sbjct: 677 PDEVFFSALIDVAGHAKM--LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKAL 734
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
E+ ++ + P+ + LI LCE Q+ +A++ ++ G +P+ Y
Sbjct: 735 ELYEK-IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITY 787
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 1/206 (0%)
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
P + ++N+LM++ + A + ++ G+ D Y T+I KSG+++ E
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
F +M GVE+N TF LI+G + G V A Y + K+ +P+ LI +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 390 KKRVSEALEIIRNAMRDV-SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
V A +++ + P S L+K C GQ+E A ++ + G
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 449 KIYDAFIEGYKKLGNDQMAATLIMEM 474
++Y + K G+ A ++ +M
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDM 670
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 5/237 (2%)
Query: 229 SKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM 288
+K+ L P + +FN LM ++E V ++ G + Y L++ GK+
Sbjct: 459 TKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKV 518
Query: 289 REAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHL 348
+++ +M G+ ++ + +I G ++GQ+ KA + + V+ + V F L
Sbjct: 519 DAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 349 INGYCKVGDVDSAILVYKDMLQKD--FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRD 406
I+ + G VD A V +M + P+ +IG L++ C +V A E+ + +
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ-MIHK 637
Query: 407 VSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE--GYKKL 461
+ + Y + + + G + A + M K PD + A I+ G+ K+
Sbjct: 638 YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM 694
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 6/224 (2%)
Query: 236 DVHSFNDLMMGFYRD-GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
D SFN ++ G+ G E VW EM G ++ SY+ +++ + G + + KL
Sbjct: 225 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 284
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNSVTFEHLINGYC 353
++ M+ + + D YN ++ K+ + +A K M E G+E N VT+ LI C
Sbjct: 285 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 344
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K + A V+ +ML+K P T + L + V E L MR + P+
Sbjct: 345 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLA----KMRKMGCEPTV 400
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
++Y +LI++LC + L L +M K PDL Y I G
Sbjct: 401 ETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 444
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 185 MLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLM 244
M +GI P + T N LI + K + + +F E+ L G L P + +++ M
Sbjct: 323 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM--LEKG-----LFPTIRTYHAFM 375
Query: 245 MGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLR 304
R GE + E+ +M + GC P + +Y +L+ C LW+EM+ K +
Sbjct: 376 R-ILRTGEE--VFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVG 432
Query: 305 LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC----------- 353
D+++Y +I G + +G+IE+A ++KEM+ G+ N E +I +
Sbjct: 433 PDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE-NVEDMIQSWFSGKQYAEQRIT 491
Query: 354 -KVGDVDSAILVYKDMLQKDF--RPEASTI 380
G+V+ +V K +K+F +PE +
Sbjct: 492 DSKGEVNKGAIVKKSEREKNFLQQPEVRKV 521
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 6/228 (2%)
Query: 235 PDVHSFNDLMMGFYRDGEM----EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMRE 290
PD + LM G+ ++G + M+E + + +R P+ +Y +++ F G M
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDR-NSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 291 AEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNSVTFEHLI 349
A ++ EM G+ + YN ++ G+ K QI++AE+ +EM E G+E + V++ +I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 350 NGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSF 409
+G + D A+ + +M + P + L++ + A + M D
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 410 CPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
++ +L++ C G +E+A ++ ++M GF P++ Y + G
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANG 638
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLR---LDVTAYNTIIGGFYKSGQIEK 325
P+ Y LM + G++ + ++ E MR + R D Y T++ F +G +++
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK-DFRPEASTIGMLI 384
A + EM GV +N +T+ L+ GYCK +D A + ++M + P+ + ++I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 385 EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL-QAKMAGKG 443
+G + AL N MR P++ SY L+K GQ + A ++ M
Sbjct: 531 DGCILIDDSAGALAFF-NEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ DL ++ +EGY +LG + A ++ M
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRM 620
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 37/200 (18%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD ++ ++ F G M+ +V EM R G N +YN+L+ +C + ++ AE L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 295 WEEM-RVKGLRLDVTAYNTIIGG-----------------------------------FY 318
EM G+ DV +YN II G F
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 319 KSGQIEKAEEFFKEM-ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
SGQ + A F EM V+ + + + L+ GYC++G ++ A V M + F P
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 378 STIGMLIEGLCEKKRVSEAL 397
+T G L G+ + ++ +AL
Sbjct: 630 ATYGSLANGVSQARKPGDAL 649
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 17/232 (7%)
Query: 148 MLLKTYRQCD--SAP--FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
ML RQ D S P + ++ + + +D + +++ + G+ T N+L+
Sbjct: 436 MLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLL- 494
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
KG C I R LR+ + PDV S+N ++ G + +NEM
Sbjct: 495 -----KGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEM 549
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM----RVKGLRLDVTAYNTIIGGFYK 319
G P SY LM F G+ + A ++++EM RVK +D+ A+N ++ G+ +
Sbjct: 550 RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK---VDLIAWNMLVEGYCR 606
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
G IE A+ M+ G N T+ L NG + A+L++K++ ++
Sbjct: 607 LGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 117/283 (41%), Gaps = 42/283 (14%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
RPD +FN ++ G+ + +++ EM + C P++ +YN+++ L G+
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVF 292
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFE------- 346
+ E + KG+++ +T ++++ + G + AE + M + V E
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLK 352
Query: 347 ----------------HLINGYCKVGDV--DSAILVYKD-------------MLQKDFRP 375
+GY +V + + V+K +L K F P
Sbjct: 353 EKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAP 412
Query: 376 EASTIGMLIEGLCEKKRVSEALEIIRNAMR---DVSFCPSRKSYELLIKRLCEDGQMEEA 432
++ L++G + RV++ ++ AMR D + P +Y ++ G M+ A
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARML-EAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
++ A+MA G + Y+ ++GY K A L+ EM+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT 514
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 10/278 (3%)
Query: 155 QCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAG 214
QC + L+ + + + EI L+ G+ P + N L+ ++ AG
Sbjct: 294 QCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR-----AG 348
Query: 215 YGI-FREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLY 273
Y EIF L + PD S+N ++ + R G E V+ EM+R G P +
Sbjct: 349 YPYGAAEIFSLMQ---HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
S+ +L++ + + + E + +EM G+ D N+++ + + GQ K E+ EM
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
E G ++ T+ LIN Y K G ++ ++ ++ +K+FRP+ T I KK
Sbjct: 466 ENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLY 525
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEE 431
+ LE+ M D P + ++L+ + Q+E+
Sbjct: 526 VKCLEVFEE-MIDSGCAPDGGTAKVLLSACSSEEQVEQ 562
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 137/300 (45%), Gaps = 9/300 (3%)
Query: 162 VFDLLIKSCLELK-KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
V++ I+ ++ K + +I++ + ++ P T NL+I+ K S + ++ E
Sbjct: 230 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCE 289
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ + +P++ ++ L+ F R+G E EE++ +++ G P++Y YN LM
Sbjct: 290 M-------RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 342
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
+ G A +++ M+ G D +YN ++ + ++G AE F+EM+ G+
Sbjct: 343 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ L++ Y K DV + K+M + P+ + ++ + ++ +E I
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK-MEKI 461
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
M + +Y +LI + G +E +L ++ K F PD+ + + I Y +
Sbjct: 462 LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 145/318 (45%), Gaps = 14/318 (4%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQ---IRTCNLLISCVAKCKGSCA-GYGI 217
+ LLIK+ I+ + ++ +++ +SP+ + N I + K KG+ +
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 218 FREIFGLRDGDSKVRLRPDVHSFNDLMMGFY-RDGEMEMIEEVWNEMERFGCVPNLYSYN 276
F+ + RD R +P ++N LM+ Y + + M +++ EM C PN+ +Y
Sbjct: 252 FQRM--KRD-----RCKPTTETYN-LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 303
Query: 277 ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
L+ F EG +AE+++E+++ GL DV YN ++ + ++G A E F M+
Sbjct: 304 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
G E + ++ +++ Y + G A V+++M + P + +L+ + + V++
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 397 LEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
I++ M + P ++ GQ + K+ A+M D+ Y+ I
Sbjct: 424 EAIVKE-MSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Query: 457 GYKKLGNDQMAATLIMEM 474
Y K G + L +E+
Sbjct: 483 IYGKAGFLERIEELFVEL 500
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+V++ L++S G+ EI +++ G P + N+++ + +F E
Sbjct: 335 YVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE 394
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ ++ + P + S L+ + + ++ E + EM G P+ + N ++
Sbjct: 395 M-------KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
L+ G+ + EK+ EM D++ YN +I + K+G +E+ EE F E++
Sbjct: 448 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 507
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ VT+ I Y + + V+++M+ P+ T +L+ +++V + ++
Sbjct: 508 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
Query: 401 RNAMRDVS 408
R + V+
Sbjct: 568 RTMHKGVT 575
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 15/256 (5%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K +PDV FN L+ + + + + E ++ ++ VP +Y +L+ +C G +
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 290 EAEKLWEEMR---VKGLRLDVTAYNTIIGGFYK-SGQIEKAEEFFKEMELGGVESNSVTF 345
AE + EM+ V + VT YN I G K G E+A + F+ M+ + + T+
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI-----EGLCEKKRVSEALEII 400
+IN Y K + +Y +M +P T L+ EGLCEK A EI
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK-----AEEIF 322
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
D P Y L++ G A ++ + M G EPD Y+ ++ Y +
Sbjct: 323 EQLQED-GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 461 LGNDQMAATLIMEMSR 476
G A + EM R
Sbjct: 382 AGLHSDAEAVFEEMKR 397
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 37/242 (15%)
Query: 237 VHSFNDLMMGFY-RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
V +N + G R G E +V+ M+R C P +YN+++ L+ K + KL+
Sbjct: 228 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 287
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
EMR + ++ Y ++ F + G EKAEE F++++ G+E + + L+ Y +
Sbjct: 288 CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA 347
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G A ++ M CE P R S
Sbjct: 348 GYPYGAAEIFSLMQHMG---------------CE---------------------PDRAS 371
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
Y +++ G +A + +M G P +K + + Y K + ++ EMS
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Query: 476 RT 477
Sbjct: 432 EN 433
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 257 EEVWNEMERFGCVPNLYSYNILMAL---FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
+EVW E+ +S ++ L FC EG EA + EM KG+R + YNT+
Sbjct: 326 KEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTL 385
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
+ + KS IE+ E F EM G++ ++ T+ L++ Y + D + ++M
Sbjct: 386 MDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGL 445
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
P + LI K++S+ M+ V PS SY LI G E+A
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAY 505
Query: 434 KLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
+M +G +P ++ Y + ++ +++ G+
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGD 535
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 140/351 (39%), Gaps = 45/351 (12%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAG-YGIFRE 220
+++ I ++ D + E+ + + P TC +LI+ + K S + IF +
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ + V+ DV F L+ F +G E + EME+ G N YN LM
Sbjct: 335 M-----SEKGVKWSQDV--FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD 387
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
+ + E E L+ EMR KGL+ YN ++ + + Q + E +EME G+E
Sbjct: 388 AYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447
Query: 341 N------------------------------------SVTFEHLINGYCKVGDVDSAILV 364
N S ++ LI+ Y G + A
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 365 YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLC 424
+++M ++ +P T +++ + +EI + +R+ +R +Y L+
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE-KIKGTRITYNTLLDGFA 566
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
+ G EA + ++ + G +P + Y+ + Y + G D L+ EM+
Sbjct: 567 KQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA 617
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 18/250 (7%)
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCK--GSCAGYGIFREIFGLRDGDSKVRLRPDVHS 239
++R + G+ P +++ LIS + K A R KV L+P HS
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRM--------KKVGLKPSSHS 487
Query: 240 FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM- 298
+ L+ + G E + EM + G P++ +Y ++ F G + ++W+ M
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLML 547
Query: 299 --RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
++KG R+ YNT++ GF K G +A + E G++ + +T+ L+N Y + G
Sbjct: 548 REKIKGTRI---TYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGG 604
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+ K+M + +P++ T +I + A M P +SY
Sbjct: 605 QDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF-FYHKMMVKSGQVPDPRSY 663
Query: 417 ELLIKRLCED 426
E L + + ED
Sbjct: 664 EKL-RAILED 672
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 10/233 (4%)
Query: 147 EMLLKTYRQCDSAPFV--FDLLIKSCLELKKI-DGSIEIVRMLRSRGISPQIRTCNLLIS 203
E LL+ P V + LI + KK+ D + + ++ G+ P + LI
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
+ Y F E+ K ++P V ++ ++ F R G+ + E+W M
Sbjct: 494 AYSVSGWHEKAYASFEEM-------CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
R +YN L+ F +G EA + E GL+ V YN ++ + + GQ
Sbjct: 547 LREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD 606
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
K + KEM ++ +S+T+ +I + +V D A +K M++ P+
Sbjct: 607 AKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 147/308 (47%), Gaps = 26/308 (8%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F L++K+C L + G ++I L+ G+ + N LI KC C G+ R+
Sbjct: 115 FSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKC--GC--LGLSRQ 170
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+F ++ R V S+N ++ G+ + G + E+++ M + NL S+N +++
Sbjct: 171 MF------DRMPKRDSV-SYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMIS 221
Query: 281 LFCGEGKMRE-AEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE 339
+ + A KL+ +M K D+ ++N++I G+ K G+IE A+ F M
Sbjct: 222 GYAQTSDGVDIASKLFADMPEK----DLISWNSMIDGYVKHGRIEDAKGLFDVMP----R 273
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
+ VT+ +I+GY K+G V A ++ M +D S ++ G + K EALEI
Sbjct: 274 RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS----MMAGYVQNKYHMEALEI 329
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
+ ++ P + +++ + + G++ +A+ + + K F K+ A I+ Y
Sbjct: 330 FSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYS 389
Query: 460 KLGNDQMA 467
K G+ Q A
Sbjct: 390 KCGSIQHA 397
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 121/242 (50%), Gaps = 10/242 (4%)
Query: 236 DVHSFNDLMMGF---YRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
DV FN ++ G+ + D + + +W EM + PN SY+ +++ F G + ++
Sbjct: 257 DVEGFNVILNGWCNIWTD--VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSL 314
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+L++EM+ +GL + YN+++ + ++A + K++ G++ +SVT+ +I
Sbjct: 315 RLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPL 374
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
C+ G +D A V M+ ++ P T +E + +K LE++ M+ P+
Sbjct: 375 CEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEK----TLEVL-GQMKISDLGPT 429
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
+++ L++ +L + Q E ALK+ A+M + +Y A I+G G + A +
Sbjct: 430 EETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYS 489
Query: 473 EM 474
EM
Sbjct: 490 EM 491
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 309 AYNTIIGGFYKSGQIEKAEEF-----------------------------------FKEM 333
A+ ++ + G IEKAEEF ++EM
Sbjct: 226 AFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREM 285
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
+ N ++ H+I+ + KVG++ ++ +Y +M ++ P L+ L +
Sbjct: 286 GNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCF 345
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
EA+++++ + + P +Y +I+ LCE G+++ A + A M + P + + A
Sbjct: 346 DEAMKLMKK-LNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHA 404
Query: 454 FIEG 457
F+E
Sbjct: 405 FLEA 408
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 151/354 (42%), Gaps = 29/354 (8%)
Query: 76 LQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKS------- 128
L+ + +P AL+ + D+S+ + Y+ V L++ R ++I+S
Sbjct: 40 LRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKI 99
Query: 129 ---ALVSRCLFDCNNAPVKFFEMLLKTYRQCDS-----APFVFDLLIKSCLELKKIDGSI 180
S + A + F ++T+ Q D + F+ L+ +CL K D
Sbjct: 100 KEEPFYSTLIRSYGQASM--FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVP 157
Query: 181 EIVRMLRSR--GISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
++ + R I P + +LI I R++ G +
Sbjct: 158 QLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQG-------KGMEVTTI 210
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
+F ++ Y+ GE+E+ + +WNEM + GC + +YN+ + E R E L EEM
Sbjct: 211 AFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKE-LIEEM 269
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
GL+ D +YN ++ + + G +++A++ ++ +E N+ TF LI C
Sbjct: 270 SSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLY 329
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+ ++K + P+ +T+ L+ GL E K+ +A +IR + F PS
Sbjct: 330 EQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKK--KFPPS 381
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEM-ERFG-CVPNLYSYNILMALFCGEGKMREAEKLWE 296
SFN L+ + + ++++E+ +R+ +P+ SY IL+ +C G +A ++
Sbjct: 139 SFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMR 198
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE----------------------------- 327
+M+ KG+ + A+ TI+ YK G++E A+
Sbjct: 199 QMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKES 258
Query: 328 -----EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
E +EM G++ +++++ +L+ YC+ G +D A VY+ + + P A+T
Sbjct: 259 PERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRT 318
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
LI LC + + I + ++ + P + + L+ L E+ + ++A L + K
Sbjct: 319 LIFHLCYSRLYEQGYAIFKKSVY-MHKIPDFNTLKHLVVGLVENKKRDDAKGL-IRTVKK 376
Query: 443 GFEPDLKIYDAFIEGYKKL 461
F P +F+ +KKL
Sbjct: 377 KFPP------SFLNAWKKL 389
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 8/237 (3%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
+I+ +IEI+ + G P ++ N +++ + K +F EI + K+ +
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAK-------LFDEIHKIFVSAPKLGVE 199
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
D N L+ G G +E ++ +E + PN+ +++ L+ FC +GK EA KL
Sbjct: 200 IDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKL 259
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
E M + + D +N +I G K G++E+ + + M++ G E N T++ ++ G
Sbjct: 260 LERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLD 319
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
A + M+ RP + ++ GLCE K V E ++R M + F P
Sbjct: 320 KKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQ-MVNHGFVP 375
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 143/323 (44%), Gaps = 15/323 (4%)
Query: 151 KTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKG 210
K Y+ +S ++ L+I + K D EI ++R+ + + R + + G
Sbjct: 89 KDYQPTES---LYALMINKFGQAKMYD---EIEEVMRTIKLEKRCRFSEEFFYNLMRIYG 142
Query: 211 SCAGYGIFREI---FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG 267
+ AG I R I FG+ D P SFN ++ + I +++ + G
Sbjct: 143 NLAGR-INRAIEILFGMPD----FGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLG 197
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
+ NIL+ C G + A +L +E + R +V ++ +I GF G+ E+A
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
+ + ME +E +++TF LI+G K G V+ I + + M K P T ++ GL
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+KKR EA E++ + M PS SY+ ++ LCE + E + +M GF P
Sbjct: 318 LDKKRNLEAKEMM-SQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPK 376
Query: 448 LKIYDAFIEGYKKLGNDQMAATL 470
++ ++ ND A L
Sbjct: 377 TLMWWKVVQCVVSKNNDDSQANL 399
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+G+I +A E M G +S +F ++N D ++ + +A
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
+ +LI+GLCE + AL+++ + S P+ ++ LI+ C G+ EEA KL +M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSR-PNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+ EPD ++ I G +K G + L+ M
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERM 298
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L P+ ++F ++ + + +++ + + GC +LY + L++++ G++ +A
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH 189
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
K+++ K DV +Y +I G+ G IE A++ F E+ + V V++ +I+GY
Sbjct: 190 KVFD----KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV----VSWNAMISGY 241
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+ G+ A+ ++KDM++ + RP+ ST+ ++ C + E + + D F +
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSA-CAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
K LI + G++E A L ++ K D+ ++ I GY + + A L
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 473 EMSRT 477
EM R+
Sbjct: 357 EMLRS 361
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 213 AGY---GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
+GY G ++E L K +RPD + ++ + G +E+ +V ++ G
Sbjct: 239 SGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG 298
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
NL N L+ L+ G++ A L+E + K DV ++NT+IGG+ ++A
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLL 354
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSA--ILVYKDMLQKDFRPEASTIGMLIEGL 387
F+EM G N VT ++ +G +D I VY D K +S LI+
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+ + A ++ + + S S+ +I G+ + + L ++M G +PD
Sbjct: 415 AKCGDIEAAHQVFNSILHK-----SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 140/337 (41%), Gaps = 36/337 (10%)
Query: 143 VKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLR----SRGISPQIRTC 198
++ F+ ++KT + D + V ++ +C + GSIE+ R + G ++
Sbjct: 251 LELFKDMMKTNVRPDESTMV--TVVSACAQ----SGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N LI +KC G+F + DV S+N L+ G+ M + +E
Sbjct: 305 NALIDLYSKCGELETACGLFERL-----------PYKDVISWNTLIGGY---THMNLYKE 350
Query: 259 ---VWNEMERFGCVPN-LYSYNILMA-LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
++ EM R G PN + +IL A G + ++ + R+KG+ + ++
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
I + K G IE A + F + + + ++ +I G+ G D++ ++ M +
Sbjct: 411 IDMYAKCGDIEAAHQVFNSI----LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
+P+ T L+ + I R +D P + Y +I L G +EA
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 526
Query: 434 KLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
++ M EPD I+ + ++ K GN ++ +
Sbjct: 527 EMINMME---MEPDGVIWCSLLKACKMHGNVELGESF 560
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 141/301 (46%), Gaps = 13/301 (4%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVR--MLRSRGI---SPQIRTCNLLISCVAKCKG 210
C V++ LI + L + ++E VR + + +GI P + T N+L+ A+
Sbjct: 164 CRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGK 223
Query: 211 SCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
+F+++ + PDV++FN +M + ++G ++ +E V M C P
Sbjct: 224 VDQVNALFKDL-------DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
++ ++N+L+ + + + + E+ ++ + + + +N++I + K+ I+KAE F
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
K+M + +T+E +I Y G V A +++++ + D +AST+ ++E C
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
EA ++ NA P +Y+ L K + E+ L KM G P+ +
Sbjct: 397 GLYIEADKLFHNA-SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRF 455
Query: 451 Y 451
+
Sbjct: 456 F 456
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 7/293 (2%)
Query: 186 LRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMM 245
+++ G P N LI+ + R G R +P+V ++N L+
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIE--RCQPNVVTYNILLR 216
Query: 246 GFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRL 305
F + G+++ + ++ +++ P++Y++N +M + G ++E E + MR +
Sbjct: 217 AFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKP 276
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
D+ +N +I + K + EK E+ FK + + TF +I Y K +D A V+
Sbjct: 277 DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVF 336
Query: 366 KDMLQKDFRPEASTIGMLI--EGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRL 423
K M ++ P T +I G C VS A EI + + +++
Sbjct: 337 KKMNDMNYIPSFITYECMIMMYGYCGS--VSRAREIFEEVGESDRVLKA-STLNAMLEVY 393
Query: 424 CEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
C +G EA KL + PD Y + Y K + L+ +M +
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEK 446
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 115/253 (45%), Gaps = 12/253 (4%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD ++ L+ + G+ M +++EM+ GC P+ YN AL R+ K
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYN---ALITAHLHTRDKAKA 187
Query: 295 WEEMR-----VKGL---RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFE 346
E++R +KG+ + +V YN ++ F +SG++++ FK++++ V + TF
Sbjct: 188 LEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 347 HLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRD 406
+++ Y K G + V M + +P+ T +LI+ +K+ + + ++ MR
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 407 VSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQM 466
P+ ++ +I + +++A + KM + P Y+ I Y G+
Sbjct: 308 KE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366
Query: 467 AATLIMEMSRTQK 479
A + E+ + +
Sbjct: 367 AREIFEEVGESDR 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY- 318
W + +R+ +P+ Y+ L+++ +G+ R A L+ EM+ G R D + YN +I
Sbjct: 122 WMQKQRW-YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLH 180
Query: 319 ---KSGQIEKAEEFFKEMELGGVE---SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
K+ +EK + +M+ G+E N VT+ L+ + + G VD ++KD+
Sbjct: 181 TRDKAKALEKVRGYLDKMK--GIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSP 238
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
P+ T +++ + + E +E + MR P ++ +LI + + E+
Sbjct: 239 VSPDVYTFNGVMDAYGKNGMIKE-MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+ + +P L +++ I Y K
Sbjct: 298 EQTFKSLMRSKEKPTLPTFNSMIINYGK 325
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 12/271 (4%)
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRP-DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG 267
KG C G+G E G+ D + P V+ + L F + G E +++ ME G
Sbjct: 209 KGLC-GHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDG 267
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
+ Y LM +C + M A +L+ M + LD +NT+I GF K G ++K
Sbjct: 268 YYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGR 327
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI-LVYKDMLQKDFRPEASTIGMLIEG 386
F +M GV+SN T+ +I YCK G+VD A+ L + +D LI G
Sbjct: 328 VMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFG 387
Query: 387 LCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
+K + +A++++ M D P +Y +L+K L + +++ A+ + + G
Sbjct: 388 FYKKGGMDKAVDLLMR-MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGI 446
Query: 447 DLKIYDAFIEGYKKLGNDQMAA-TLIMEMSR 476
+ + D LGN ++ +L+ E++R
Sbjct: 447 NPPVID-------DLGNIEVKVESLLGEIAR 470
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 162/393 (41%), Gaps = 52/393 (13%)
Query: 116 ARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKK 175
A L L+++ +AL S+ + A + E ++ C PF ++ +IK +
Sbjct: 473 ANLAAVGLAVVTTALCSQRNYI---AALSRIEKMVNL--GCTPLPFSYNSVIKCLFQENI 527
Query: 176 IDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRP 235
I+ +V +++ P + T ++++ + K A + I D ++ LRP
Sbjct: 528 IEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAII-------DAMEELGLRP 580
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
V ++ ++ + G + EE + +M G P+ +Y I++ + G++ EA +L
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
EE+ LR Y +I GF K G +EK ++ +M G+ N V + LI + K
Sbjct: 641 EEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKK 700
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC-----EKKRV----------------- 393
GD + ++ M + D + + L+ GL +KKR
Sbjct: 701 GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT 760
Query: 394 ----------------SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQA 437
S A+E+I + S P+ + +I C G+++EA
Sbjct: 761 KPLVSIPSSLGNYGSKSFAMEVIGKVKK--SIIPNLYLHNTIITGYCAAGRLDEAYNHLE 818
Query: 438 KMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
M +G P+L Y ++ + + G+ + A L
Sbjct: 819 SMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
ME+I +V + +PNLY +N ++ +C G++ EA E M+ +G+ ++ Y
Sbjct: 780 MEVIGKVKKSI-----IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTI 834
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
++ ++G IE A + F E E + V + L+ G C A+ + +M +
Sbjct: 835 LMKSHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
P + L++ LC + EA++++++ M + P ++ LI LCE+ ++ EA
Sbjct: 892 INPNKDSYEKLLQCLCYSRLTMEAVKVVKD-MAALDIWPRSINHTWLIYILCEEKKLREA 950
Query: 433 LKLQAKMAGKG 443
L A M G
Sbjct: 951 RALFAIMVQSG 961
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
+NTII G+ +G++++A + M+ G+ N VT+ L+ + + GD++SAI +++
Sbjct: 797 HNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG-- 854
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQM 429
+ P+ L++GLC+ KR +AL ++ M+ P++ SYE L++ LC
Sbjct: 855 -TNCEPDQVMYSTLLKGLCDFKRPLDALALMLE-MQKSGINPNKDSYEKLLQCLCYSRLT 912
Query: 430 EEALKLQAKMAGKGFEP 446
EA+K+ MA P
Sbjct: 913 MEAVKVVKDMAALDIWP 929
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 156/378 (41%), Gaps = 58/378 (15%)
Query: 139 NNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKID-GSIEIVRMLRSRGISPQIRT 197
NN + L R + P +F+ LI ++L +D G + +M++ +G+ + T
Sbjct: 286 NNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIK-KGVQSNVFT 344
Query: 198 CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIE 257
+++I + CK Y + +F G + +VH + +L+ GFY+ G M+
Sbjct: 345 YHIMIG--SYCKEGNVDYAL--RLFVNNTGSEDIS--RNVHCYTNLIFGFYKKGGMDKAV 398
Query: 258 EVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF 317
++ M G VP+ +Y +L+ + +++ A + + + G ++ + +
Sbjct: 399 DLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL---- 454
Query: 318 YKSGQIE-KAEEFF-----KEMELGGVESNSVT---------------FEHLINGYCK-- 354
G IE K E K+ L V VT E ++N C
Sbjct: 455 ---GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPL 511
Query: 355 ----------------VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
+ D+ S + + +++ DF P+ T +++ LC+K A
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNIIQEL---DFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
II +AM ++ P+ Y +I L + G++ EA + AKM G +PD Y I Y
Sbjct: 569 II-DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTY 627
Query: 459 KKLGNDQMAATLIMEMSR 476
+ G A L+ E+ +
Sbjct: 628 ARNGRIDEANELVEEVVK 645
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 3/170 (1%)
Query: 227 GDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG 286
G K + P+++ N ++ G+ G ++ M++ G VPNL +Y ILM G
Sbjct: 784 GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Query: 287 KMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFE 346
+ A L+E + D Y+T++ G + A EM+ G+ N ++E
Sbjct: 844 DIESAIDLFEGTNCEP---DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYE 900
Query: 347 HLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
L+ C A+ V KDM D P + LI LCE+K++ EA
Sbjct: 901 KLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREA 950
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
LRP ++ L+ GF + G ME + ++M G PN+ Y L+ F +G + +
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSF 707
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
L+ M ++ D AY T++ G +++ +K + E + + + L++
Sbjct: 708 TLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIP 767
Query: 353 CKVGDVDSAILVYKDM--LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC 410
+G+ S + + ++K P +I G C R+ EA + +M+
Sbjct: 768 SSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLE-SMQKEGIV 826
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
P+ +Y +L+K E G +E A+ L G EPD +Y ++G A L
Sbjct: 827 PNLVTYTILMKSHIEAGDIESAIDL---FEGTNCEPDQVMYSTLLKGLCDFKRPLDALAL 883
Query: 471 IMEMSRT 477
++EM ++
Sbjct: 884 MLEMQKS 890
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 137/323 (42%), Gaps = 18/323 (5%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C+ P VF LL++ D +IE+ + S G P R N+++ K
Sbjct: 104 CEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGAL 163
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG---EMEMIEEVWNEMERFGCVPNL 272
IF I R R + SF+ + F G ++ ++ V M G PN
Sbjct: 164 EIFEGI----------RFR-NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNR 212
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
+ ++ L C G + EA ++ M G+ + V ++ ++ GF++SG+ +KA + F +
Sbjct: 213 ERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNK 272
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
M G N VT+ LI G+ +G VD A V + + P+ ++I R
Sbjct: 273 MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
Query: 393 VSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYD 452
EA ++ ++ P + ++ ++ LC G+ + ++ G G + DL +
Sbjct: 333 FEEARKVF-TSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRIT---HGIGTDFDLVTGN 388
Query: 453 AFIEGYKKLGNDQMAATLIMEMS 475
+ K+G + A ++ MS
Sbjct: 389 LLSNCFSKIGYNSYALKVLSIMS 411
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 131/292 (44%), Gaps = 11/292 (3%)
Query: 156 CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY 215
C + LIK ++L +D + ++ ++S G++P I CNL+I +
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR-------L 330
Query: 216 GIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSY 275
G F E + K +L PD ++F ++ G+ +++ + + + G +L +
Sbjct: 331 GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTG 387
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
N+L F G A K+ M K LD Y + + G A + +K +
Sbjct: 388 NLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIK 447
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
++ +I+ ++G ++A+ ++K + + + + + + I+GL KR+ E
Sbjct: 448 EKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEE 507
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
A + + M++ P+R++Y +I LC++ + E+ K+ + +G E D
Sbjct: 508 AYSLCCD-MKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)
Query: 237 VHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
V+ ++ L+ GF+R GE + +++N+M + GC PNL +Y L+ F G + EA +
Sbjct: 247 VNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS 306
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
+++ +GL D+ N +I + + G+ E+A + F +E + + TF +++ C G
Sbjct: 307 KVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
D + + DF + T +L + S AL+++ + M F +Y
Sbjct: 367 KFDLVPRITHG-IGTDF--DLVTGNLLSNCFSKIGYNSYALKVL-SIMSYKDFALDCYTY 422
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
+ + LC G A+K+ + + D + A I+ +LG A L
Sbjct: 423 TVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHL 476
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 6/251 (2%)
Query: 229 SKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM 288
S ++P V F L+ F+R + EV+ M FG VPN + N++M + +
Sbjct: 102 SGCEIKPRV--FLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVV 159
Query: 289 REAEKLWEEMRVKGL-RLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
A +++E +R + D+ + G G + + K M G N F
Sbjct: 160 NGALEIFEGIRFRNFFSFDIALSHFCSRG--GRGDLVGVKIVLKRMIGEGFYPNRERFGQ 217
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV 407
++ C+ G V A V M+ + ML+ G +A+++ N M +
Sbjct: 218 ILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLF-NKMIQI 276
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
P+ +Y LIK + G ++EA + +K+ +G PD+ + + I Y +LG + A
Sbjct: 277 GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
Query: 468 ATLIMEMSRTQ 478
+ + + +
Sbjct: 337 RKVFTSLEKRK 347
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 16/193 (8%)
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
+FRE+ S+ L + ++ L+ G ++ G+ +M +E++ EM G P++ +YN
Sbjct: 3 LFREM-------SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYN 55
Query: 277 ILMALFCGEGKMREA------EKLWE---EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
IL+ C GK+ +A E W+ + +KG++ +V Y T+I GF K G E+A
Sbjct: 56 ILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAY 115
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
F++M+ G +S T+ LI + + GD ++ + K+M F +AST G++ + L
Sbjct: 116 TLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Query: 388 CEKKRVSEALEII 400
+ + LE++
Sbjct: 176 HDGRLDKGFLEML 188
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
E F+EM G+ N+VT+ LI G + GD D A ++K+M+ P+ T +L++GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 388 CEKKRVSEALEIIRNAMRDVS--FC--------PSRKSYELLIKRLCEDGQMEEALKLQA 437
C+ ++ +AL + + D FC P+ +Y +I C+ G EEA L
Sbjct: 62 CKNGKLEKAL--VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 438 KMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
KM G PD Y+ I + + G+ +A LI EM
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 258 EVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF 317
E++ EM + G V N +Y L+ G A+++++EM G+ D+ YN ++ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 318 YKSGQIEKA---------EEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
K+G++EKA + F + L GV+ N VT+ +I+G+CK G + A +++ M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
+ P++ T LI + + E+I+ MR F +Y L+ L DG+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE-MRSCRFAGDASTYGLVTDML-HDGR 179
Query: 429 MEEAL 433
+++
Sbjct: 180 LDKGF 184
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+L+ EM +GL + Y T+I G +++G + A+E FKEM GV + +T+ L++G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 353 CKVGDVDSAILVYK---------DMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
CK G ++ A++ K + K +P T +I G C+K EA + R
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK- 120
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIY 451
M++ P +Y LI+ DG + +L +M F D Y
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 21/298 (7%)
Query: 123 LSIIKSALVSRCLFDCN--NAPVKFFEMLLKTYRQCDSAPF--VFDLLIKSCLELKKIDG 178
L I + + C CN N +++FE + KT D + + D+ KS G
Sbjct: 219 LDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKS--------G 270
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH 238
+E V L R ++ + + S + K G Y R + L++ S + ++P+V
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIR--YVLQEMKS-MDVKPNVV 327
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
+N L+ R G+ + ++NEM G PN + L+ ++ R+A +LWEEM
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVESNSVTFEHLINGYCKVGD 357
+ K +D YNT++ G E+AE F +M E ++ ++ ++N Y G
Sbjct: 388 KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA-----LEIIRNAMRDVSFC 410
+ A+ ++++ML+ + L++ L + KR+ + L I R D C
Sbjct: 448 AEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLC 505
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 5/248 (2%)
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N+ S + C C Y E F + K L PD +++ ++ + + G++E +
Sbjct: 221 NITYSTIITCAKRCNLYNKAIEWF---ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLS 277
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
++ G P+ ++++L +F G + +EM+ ++ +V YNT++
Sbjct: 278 LYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMG 337
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
++G+ A F EM G+ N T L+ Y K A+ ++++M K + P
Sbjct: 338 RAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKW-PMDF 396
Query: 379 TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC-PSRKSYELLIKRLCEDGQMEEALKLQA 437
+ + +C + E E + N M++ C P SY ++ G+ E+A++L
Sbjct: 397 ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFE 456
Query: 438 KMAGKGFE 445
+M G +
Sbjct: 457 EMLKAGVQ 464
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
YN+ M + + E++ EM G+ LD Y+TII + KA E+F+ M
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMY 248
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G+ + VT+ +++ Y K G V+ + +Y+ + ++P+A +L + E
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDY- 307
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAF 454
+ + + M+ + P+ Y L++ + G+ A L +M G P+ K A
Sbjct: 308 DGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367
Query: 455 IEGYKKLGNDQMAATLIMEM 474
++ Y K + A L EM
Sbjct: 368 VKIYGKARWARDALQLWEEM 387
>AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8034036-8035292 REVERSE
Length = 418
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 177/392 (45%), Gaps = 50/392 (12%)
Query: 93 LDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKT 152
+ +S L L L +ST I S+ A+++ K+ R + D + A + ++ +
Sbjct: 1 MTSSRLYLRFLRRFSTATGIDSQTTAYPGAITMSKAKSKLRKVQDPDKA-LAIYKSVSNN 59
Query: 153 YRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSC 212
S+ + +L ++ + ++ +I ++ S +P+I+T L S + + G
Sbjct: 60 STSPLSSRYAMELTVQRLAKSQRFS---DIEALIESHKNNPKIKTETFL-STLIRSYGRA 115
Query: 213 AGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM-ERFGCV-P 270
+ + ++F D K+ V SFN L+ E + ++++E +R+ + P
Sbjct: 116 SMFDHAMKMFEEMD---KLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITP 172
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE--- 327
+ SY +L+ +C GK +A ++ +M VKG+ + + A+ TI+G YK+G +++AE
Sbjct: 173 DKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLW 232
Query: 328 -------------------------------EFFKEMELGGVESNSVTFEHLINGYCKVG 356
E +EM G++ ++V++ +L+ YC G
Sbjct: 233 IEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKG 292
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSY 416
+ A VY+ + Q P A+T LI LC + L + + + V P K+
Sbjct: 293 MMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAI-VHKIPDFKTC 347
Query: 417 ELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ L + L ++ +ME+A + A++ K F P L
Sbjct: 348 KHLTEGLVKNNRMEDARGV-ARIVKKKFPPRL 378
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5949006-5949644 REVERSE
Length = 212
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 94/168 (55%), Gaps = 13/168 (7%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
L+PDV ++N +M+ F G E +++ EM R G VP+ +YN ++ C + K+ +A
Sbjct: 45 LQPDVQTYN-MMIRFSSLGRAE---KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR 100
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
K+ + + +NT+I G+ K+ +++ F EM G+ +N +T+ LI+G+
Sbjct: 101 KVSKS---------CSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+VGD ++A+ ++++M+ + T ++ LC +K + +A+ ++
Sbjct: 152 RQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 91/181 (50%), Gaps = 14/181 (7%)
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+++ MR + +D YN II G K+G+ ++A F + + G++ + T+ +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ + A +Y +M+++ P+ T +I GLC++ ++++A R VS S
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA--------RKVS--KSC 106
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
++ LI C+ ++++ + L +M +G ++ Y I G++++G+ A + E
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 474 M 474
M
Sbjct: 167 M 167
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
YNI++ C GK EA ++ + + GL+ DV YN +I + + +AE+ + EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G+ +++T+ +I+G CK + A V K ST LI G C+ RV
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNTLINGYCKATRVK 123
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
+ + + R + +Y LI + G AL + +M G
Sbjct: 124 DGMNLFCEMYRR-GIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%), Gaps = 9/229 (3%)
Query: 251 GEMEMIEE---VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDV 307
G+M EE V++EM + N +Y +L+ + K+ EA ++E + G+ D+
Sbjct: 154 GKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDL 213
Query: 308 TAYNTIIGGFYKSGQIEKAEEFF--KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
A++ ++ + +E AE F + E G + ++NG+C +G+V A +
Sbjct: 214 VAFHGLLMWLCRYKHVEFAETLFCSRRREFG---CDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
KD++ RP+ + G +I L +K ++ +A+E+ R AM D P K +I LC
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR-AMWDTRRNPDVKICNNVIDALCF 329
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
++ EAL++ +++ KG +P++ Y++ ++ K+ + L+ EM
Sbjct: 330 KKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
V+ + FG +L +++ L+ C + AE L+ R + D+ A N I+ G+
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRR-REFGCDIKAMNMILNGWC 258
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
G + +A+ F+K++ + V++ +IN K G + A+ +Y+ M P+
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 379 TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAK 438
+I+ LC KKR+ EALE+ R + + P+ +Y L+K LC+ + E+ +L +
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFR-EISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEE 377
Query: 439 MAGKG 443
M KG
Sbjct: 378 MELKG 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 6/216 (2%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
RPDV S+ ++ + G++ E++ M P++ N ++ C + ++ EA +
Sbjct: 279 RPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALE 338
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL--GGVESNSVTFEHLING 351
++ E+ KG +V YN+++ K + EK E +EMEL G N VTF +L+
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKY 398
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
+ DVD + + + K+ S + L+ L + E + I + M P
Sbjct: 399 SQRSKDVDIVL----ERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+++Y + I L G++ EAL +M KG P+
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 138/320 (43%), Gaps = 29/320 (9%)
Query: 91 FTLDNSSLCLHDL------YSYSTIVHIL--SRAR---LKVQALSIIKSALVSRCLFDCN 139
F +D+ + H L Y + L SR R ++A+++I L C+
Sbjct: 207 FGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMI---LNGWCVLGNV 263
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCN 199
+ +F++ ++ + +C + +I + + K+ ++E+ R + +P ++ CN
Sbjct: 264 HEAKRFWKDIIAS--KCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
+I + K +FREI S+ P+V ++N L+ + E + E+
Sbjct: 322 NVIDALCFKKRIPEALEVFREI-------SEKGPDPNVVTYNSLLKHLCKIRRTEKVWEL 374
Query: 260 WNEMERFG--CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF 317
EME G C PN +++ L+ + ++ + + E M + YN + +
Sbjct: 375 VEEMELKGGSCSPNDVTFSYLLKY---SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLY 431
Query: 318 YKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA 377
+ + EK E + EME G+ + T+ I+G G + A+ +++M+ K PE
Sbjct: 432 VQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 491
Query: 378 STIGMLIEGLCEKKRVSEAL 397
T ML+ K RV + +
Sbjct: 492 RT-EMLLNQNKTKPRVEDKM 510
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 8/242 (3%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D+ + N ++ G+ G + + W ++ C P++ SY ++ +GK+ +A +L+
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
M DV N +I +I +A E F+E+ G + N VT+ L+ CK+
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 356 GDVDSAILVYKDMLQK--DFRPEASTIGMLIEGLCEKKRVSEALE-IIRNAMRDVSFCPS 412
+ + ++M K P T L++ K V LE + +N S
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTS---- 421
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
Y L+ + + + E+ ++ ++M G PD + Y I G G A +
Sbjct: 422 -DLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Query: 473 EM 474
EM
Sbjct: 481 EM 482
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 33/270 (12%)
Query: 81 NPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNN 140
N H A RF+ + +S C D+ SY T+++ L++ +A+ + R ++D
Sbjct: 262 NVHEAKRFWKDII--ASKCRPDVVSYGTMINALTKKGKLGKAMELY------RAMWDTRR 313
Query: 141 APVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNL 200
P + C++ V D L C + K+I ++E+ R + +G P + T N
Sbjct: 314 NP---------DVKICNN---VIDAL---CFK-KRIPEALEVFREISEKGPDPNVVTYNS 357
Query: 201 LISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVW 260
L+ + K + + + + E+ L+ G P+ +F+ L+ R +++++ E
Sbjct: 358 LLKHLCKIRRTEKVWELVEEM-ELKGGSCS----PNDVTFSYLLKYSQRSKDVDIVLE-- 410
Query: 261 NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS 320
M + C YN++ L+ K + ++W EM GL D Y I G +
Sbjct: 411 -RMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTK 469
Query: 321 GQIEKAEEFFKEMELGGVESNSVTFEHLIN 350
G+I +A +F+EM G+ T E L+N
Sbjct: 470 GKIGEALSYFQEMMSKGMVPEPRT-EMLLN 498
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G46100.1); Has
11639 Blast hits to 3936 proteins in 180 species: Archae
- 0; Bacteria - 2; Metazoa - 206; Fungi - 141; Plants -
11004; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:573098-577243 REVERSE
Length = 1110
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 7/223 (3%)
Query: 251 GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
G ++ E++ G +PN SYN+LM FC + A +L+ +M + + DV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
+I GF + GQ+ A E +M G V LI G C G D ++M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGF----VPDRTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME 430
K F P S L++G C +V EA +++ M++ S ++E++I +C + + E
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHS-DTWEMVIPLICNEDESE 343
Query: 431 EALKLQAKMAGKGFEPDLKIYDAFIEGYK--KLGNDQMAATLI 471
+ + D +I D IE K ++ D AA +
Sbjct: 344 KIKLFLEDAVKEEITGDTRIVDVGIENKKMPEIEQDDAAAETV 386
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 111/245 (45%), Gaps = 10/245 (4%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+F LIK E K + + + +PQ + N ++ + +G ++
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRG------YLQKA 174
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
F L + P+ S+N LM F + ++ + +++ +M VP++ SY IL+
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
FC +G++ A +L ++M KG D T+IGG G ++ +++ +EM G +
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 290
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
L+ G+C G V+ A V + +++ + T M+I +C + + +
Sbjct: 291 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLE 350
Query: 402 NAMRD 406
+A+++
Sbjct: 351 DAVKE 355
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 196 RTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM-E 254
R NL+ +AK + S GY + EIF ++ Y + ++ E
Sbjct: 98 RYFNLIDDVLAKHRSS--GYPLTGEIFTY-------------------LIKVYAEAKLPE 136
Query: 255 MIEEVWNEMERFGCVPNLYSYN-ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
+ + +M F P N IL L G +++A +L++ R+ G+ + +YN +
Sbjct: 137 KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLL 196
Query: 314 IGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
+ F + + A + F +M V + +++ LI G+C+ G V+ A+ + DML K F
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF 256
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
P+ + IG GLC++ E + + M F P L+K C G++EEA
Sbjct: 257 VPDRTLIG----GLCDQGMFDEGKKYLEE-MISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 216 GIFREIFGLRDGDSKVRLRP-----DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
G F E L D K P ++ +FN ++ G+ G+ E EV+ +M F C P
Sbjct: 324 GKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSP 383
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
+ S+N LM C + EAEKL+ EM K ++ D Y ++ +K G+I++ ++
Sbjct: 384 DTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYY 443
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
K M + N + L + K G +D A + DM+ + + ++ L E
Sbjct: 444 KTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEA 502
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ-------MEEALKLQAKMAGK 442
R+ E L+I+ + D + S + E + + L + G+ MEE +L+A+ K
Sbjct: 503 GRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLMEEKERLKAEAKAK 561
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 140/318 (44%), Gaps = 34/318 (10%)
Query: 152 TYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC---VAKC 208
Y C F + ++ + L K +++ + GI+P I T NL+ V K
Sbjct: 122 VYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKP 181
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
+ + Y +F + L P + +F L+ G + +E E+ +M G
Sbjct: 182 EIALEHYKLFID---------NAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGF 232
Query: 269 V--PNLYSYNILMALFCGEGKMREAE---KLWEEMRVK--GLRLDVTAYNTIIGGFYKSG 321
V P +YSY L G K +A+ KL++E++ K G D Y ++ G++
Sbjct: 233 VVDPVVYSY-----LMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKE 287
Query: 322 QIEKAEEFFKEM--ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRP---- 375
++A E ++E E V +++ + +++ + G D A+ ++ D ++K+ P
Sbjct: 288 MEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF-DAVKKEHNPPRHL 346
Query: 376 --EASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
T +++ G C + EA+E+ R M D P S+ L+ +LC++ + EA
Sbjct: 347 AVNLGTFNVMVNGYCAGGKFEEAMEVFRQ-MGDFKCSPDTLSFNNLMNQLCDNELLAEAE 405
Query: 434 KLQAKMAGKGFEPDLKIY 451
KL +M K +PD Y
Sbjct: 406 KLYGEMEEKNVKPDEYTY 423
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 110/237 (46%), Gaps = 15/237 (6%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
RP + + N ++ R + + ++ + + G PN+ +YN++ + +R+ E
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYL---DVRKPEI 183
Query: 294 LWEEMRV----KGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
E ++ L + + ++ G + +EKA E ++M + G + V + +L+
Sbjct: 184 ALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLM 243
Query: 350 NGYCKVGDVDSAILVYKDMLQK--DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV 407
G K D D + +Y+++ +K F + G L++G K+ EA+E A+ +
Sbjct: 244 MGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 408 SFCP-SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP-----DLKIYDAFIEGY 458
S S +Y +++ L E+G+ +EALKL + + P +L ++ + GY
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGY 360
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 9/224 (4%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D+ ++N ++ GF ++G + +++ M PN + L + G + L
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 296 E-EMRVKGLRLDVTAYNTIIGGFY-KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+++ L T + FY K G + A F +E E N++T+ +I GY
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE----EKNTITWSAMIGGYG 522
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K GD ++ ++++ML+K +P ST ++ V+E + + +D +F PS
Sbjct: 523 KQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
K Y ++ L G++E+AL + KM +PD++ + AF+ G
Sbjct: 583 KHYTCMVDMLARAGELEQALDIIEKMP---IQPDVRCFGAFLHG 623
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 187/437 (42%), Gaps = 64/437 (14%)
Query: 24 SSASTPPSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTKTLTPIHFSQ--IALQLK-- 79
S A P ++ TV ++ +NL+ L + + + IH S+ I LK
Sbjct: 29 SDAKVPVEEEGDDAETVFRMI-------NGSNLQVELKESLSSSGIHLSKDLIDRVLKRV 81
Query: 80 ----SNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCL 135
NP L F+ + H +S T+++IL R R
Sbjct: 82 RFSHGNPIQTLEFYRYASAIRGF-YHSSFSLDTMLYILGRNRK----------------- 123
Query: 136 FDCNNAPVKFFEMLLKTYRQCDS--APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISP 193
FD + +E+L++T R+ S +P +++ +L + ++E + + + P
Sbjct: 124 FD------QIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVE--SFWKFKRLVP 175
Query: 194 QI--RTC-NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRD 250
C N L+ + + K ++ + K + +PD+ +FN L+ G+
Sbjct: 176 DFFDTACFNALLRTLCQEKSMTDARNVYHSL--------KHQFQPDLQTFNILLSGW--- 224
Query: 251 GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
E E + EM+ G P++ +YN L+ ++C + ++ +A KL ++MR + DV Y
Sbjct: 225 KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITY 284
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC---KVGDVDSAILVYKD 367
T+IGG GQ +KA E KEM+ G + + I +C ++GD D + +
Sbjct: 285 TTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV---DE 341
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDG 427
M++K P A+T + L + + E+ + + P+ +S LIK
Sbjct: 342 MVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECL-PNTQSCMFLIKMFKRHE 400
Query: 428 QMEEALKLQAKMAGKGF 444
+++ A++L M KGF
Sbjct: 401 KVDMAMRLWEDMVVKGF 417
>AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17160224-17162221 REVERSE
Length = 665
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F++L+ + + + ++ + +G+ PQ R N ++ +K + A IF+ +
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAM- 484
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
+ +G+ +P V S+ L+ + + VWN M + G PNLY+Y + ++
Sbjct: 485 -VDNGE-----KPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVL 538
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
G+ K + L +EM KG+ V +N +I G ++G A E+F M+ VE N
Sbjct: 539 TGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNE 598
Query: 343 VTFEHLI 349
+T+E LI
Sbjct: 599 ITYEMLI 605
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 121/300 (40%), Gaps = 7/300 (2%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
LI +C + E+ + +R R + CN LI + K K A I+ ++
Sbjct: 352 LIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEG 411
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
+ + V FN L+ + G + N+ME G P +N ++
Sbjct: 412 PEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKA 471
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN---S 342
+ A ++++ M G + V +Y ++ K ++A + M G+E N
Sbjct: 472 SETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAY 531
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
T ++ G K +D+ + K+M K P T +I G C + +S +
Sbjct: 532 TTMASVLTGQQKFNLLDTLL---KEMASKGIEPSVVTFNAVISG-CARNGLSGVAYEWFH 587
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
M+ + P+ +YE+LI+ L D + A +L K +G + K YDA ++ + G
Sbjct: 588 RMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYG 647
>AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G27800.1); Has 13348 Blast hits to 4225
proteins in 143 species: Archae - 3; Bacteria - 6;
Metazoa - 114; Fungi - 126; Plants - 12736; Viruses - 0;
Other Eukaryotes - 363 (source: NCBI BLink). |
chr3:9180348-9181487 FORWARD
Length = 379
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
L ++M+ G+ D N II + K ++++A FKEM L G E N+ T+ +L+ G C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ G V + YK+M K P S +LI L ++R+ EA+E++ + + + S P
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLAN-SLSPDM 328
Query: 414 KSYELLIKRLCEDGQMEEALKL 435
+Y ++ LC G+ EAL++
Sbjct: 329 LTYNTVLTELCRGGRGSEALEM 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
K+M+ GV ++ +I Y K +VD AI V+K+M P A T L++G+CEK
Sbjct: 212 KQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEK 271
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
RV + L + M+ P+ Y +LI L + +++EA+++ M PD+
Sbjct: 272 GRVGQGLGFYKE-MQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLT 330
Query: 451 YDAFIEGYKKLGNDQMAATLIMEMSR 476
Y+ + + G A ++ E +
Sbjct: 331 YNTVLTELCRGGRGSEALEMVEEWKK 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 224 LRDGDSKVRLRPDVHS-----------FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNL 272
LR DSK PD+ + FN L + + + + + +M+ G +P+
Sbjct: 171 LRSDDSK----PDLETYTLLLSSLLKRFNKLNVCYVY---LHAVRSLTKQMKSNGVIPDT 223
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
+ N+++ + ++ EA ++++EM + G + Y+ ++ G + G++ + F+KE
Sbjct: 224 FVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKE 283
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
M++ G+ N + LI +D A+ V DML P+ T ++ LC R
Sbjct: 284 MQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGR 343
Query: 393 VSEALEII 400
SEALE++
Sbjct: 344 GSEALEMV 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 30/304 (9%)
Query: 74 IALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSR 133
IAL+ +S+P LAL F +T H+ +Y T+ IK A+ +
Sbjct: 80 IALRAQSDPDLALDIFRWTAQQRGY-KHNHEAYHTM----------------IKQAITGK 122
Query: 134 CLFDCNNAPVKFFEMLLKTY--RQCDSAPFVFDLLIKSCLELKKI-DGSIEIV-RMLRSR 189
NN F E L++ C+ + +++ +I+ C K + + + ++ +MLRS
Sbjct: 123 R----NN----FVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSD 174
Query: 190 GISPQIRTCNLLISCVAKCKGSC-AGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFY 248
P + T LL+S + K Y + L + PD N ++ +
Sbjct: 175 DSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYA 234
Query: 249 RDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVT 308
+ E++ V+ EM +G PN Y+Y+ L+ C +G++ + ++EM+VKG+ + +
Sbjct: 235 KCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGS 294
Query: 309 AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
Y +I ++++A E +M + + +T+ ++ C+ G A+ + ++
Sbjct: 295 CYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW 354
Query: 369 LQKD 372
++D
Sbjct: 355 KKRD 358
>AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) |
chr3:1956658-1958240 REVERSE
Length = 486
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 150 LKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
+K++ QC F + L+K+C++ + D + + + R I+P T N+++S +
Sbjct: 185 MKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRV- 243
Query: 210 GSCAGYGIFREIFG-LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGC 268
G F ++ L D +PDV + N ++ F G+++M+E + + FG
Sbjct: 244 ------GRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI 297
Query: 269 VPNLYSYNILMALFCGEGKMREAEKL---WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEK 325
P ++NIL+ + GK R +K+ E MR + YN II F G +
Sbjct: 298 EPETRTFNILIGSY---GKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKN 354
Query: 326 AEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
E F +M G+++++ TF LINGY G
Sbjct: 355 MELTFDQMRSEGMKADTKTFCCLINGYANAG 385
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 4/209 (1%)
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
P +Y L+ L G+ A+KL++EM +GL V Y ++ + +S I+ A
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSI 181
Query: 330 FKEME-LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
+M+ + + T+ L+ D +YK+M ++ P T +++ G
Sbjct: 182 LDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYG 241
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
R + +++ + + + P + +++ G+++ K G EP+
Sbjct: 242 RVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPET 301
Query: 449 KIYDAFIEGY-KKLGNDQMAATLIMEMSR 476
+ ++ I Y KK D+M++ +ME R
Sbjct: 302 RTFNILIGSYGKKRMYDKMSS--VMEYMR 328
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 177/381 (46%), Gaps = 50/381 (13%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
DL +Y++++++ +A+L +A +IK + L + + + LL Y ++ F
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS-----YSTLLSVY--VENHKF 311
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ L + + E+K+++ ++++ TCN++I + +F
Sbjct: 312 LEALSVFA--EMKEVNCALDLT-------------TCNIMIDVYGQLDMVKEADRLF--- 353
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE---VWNEMERFGCVPNLYSYNIL 278
+ LR K+ + P+V S+N ++ + GE E+ E ++ M+R N+ +YN +
Sbjct: 354 WSLR----KMDIEPNVVSYNTILRVY---GEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ ++ + +A L +EM+ +G+ + Y+TII + K+G++++A F+++ GV
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
E + V ++ +I Y +VG + A + ++ D P + I + L + R EA
Sbjct: 467 EIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI----LAKAGRTEEATW 522
Query: 399 IIRNA-----MRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
+ R A ++D+S + +I + + +++ KM G+ PD +
Sbjct: 523 VFRQAFESGEVKDISV------FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAM 576
Query: 454 FIEGYKKLGNDQMAATLIMEM 474
+ Y K + A T+ EM
Sbjct: 577 VLNAYGKQREFEKADTVYREM 597
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 142/314 (45%), Gaps = 8/314 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F +++++++ L K+ D + + +R R ++P T + LI+ K G+F
Sbjct: 156 FAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKE-------GMFDS 208
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ R+ D+ +++L+ R + +++ ++R G P+L +YN ++
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
++ REA L +EM G+ + +Y+T++ + ++ + +A F EM+
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
+ T +I+ Y ++ V A ++ + + D P + ++ E + EA+ +
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
R M+ + +Y +IK + + E+A L +M +G EP+ Y I + K
Sbjct: 389 R-LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 461 LGNDQMAATLIMEM 474
G AATL ++
Sbjct: 448 AGKLDRAATLFQKL 461
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 152/373 (40%), Gaps = 65/373 (17%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPF 161
D Y+YST++ + + ALS ++ R D V + ++ + R CD +
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDL----VLYSNLIELSRRLCDYSK- 243
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+I I L+ GI+P + N +I+ K K +FRE
Sbjct: 244 -----------------AISIFSRLKRSGITPDLVAYNSMINVYGKAK-------LFREA 279
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
L ++ + P+ S++ L+ + + + V+ EM+ C +L + NI++ +
Sbjct: 280 RLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDV 339
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
+ ++EA++L+ +R + +V +YNTI+ + ++ +A F+ M+ +E N
Sbjct: 340 YGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQN 399
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
VT+ +I Y K + + A + ++M + P A T
Sbjct: 400 VVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAIT---------------------- 437
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
Y +I + G+++ A L K+ G E D +Y I Y+++
Sbjct: 438 --------------YSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Query: 462 GNDQMAATLIMEM 474
G A L+ E+
Sbjct: 484 GLMGHAKRLLHEL 496
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 119/275 (43%), Gaps = 36/275 (13%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG-------- 286
P V ++N ++ R + ++ +++EM + P+ Y+Y+ L+ F EG
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 287 --KMRE-------------------------AEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
KM + A ++ ++ G+ D+ AYN++I + K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
+ +A KEM GV N+V++ L++ Y + A+ V+ +M + + + +T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
++I+ + V EA + ++R + P+ SY +++ E EA+ L M
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFW-SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
K E ++ Y+ I+ Y K + A L+ EM
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM 426
>AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4962293-4965976 FORWARD
Length = 1227
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 115/241 (47%), Gaps = 5/241 (2%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD +FN L+ G+ + + M G PN S + + C G +++A L
Sbjct: 942 PDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDL 1001
Query: 295 WEEMRVKGLRLDVTAYNT-IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
W+ M KG L + T I+ G+I KAE+F + G+ + + ++++I
Sbjct: 1002 WQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN--YDNIIKKLS 1059
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
G++D A+ + ML+ P +S+ +I GL ++ +A++ M ++ PS
Sbjct: 1060 DRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDF-HTEMVELGLSPSI 1118
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
++ L+ + CE Q+ E+ +L M G G P +++ I+ + ++ + + A+ +ME
Sbjct: 1119 STWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRF-RVEKNTVKASEMME 1177
Query: 474 M 474
M
Sbjct: 1178 M 1178
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
DV N I+ + E+A + +E+E G + + VTF LI C GD+ A+L
Sbjct: 322 DVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYL 381
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
+++ K ++P+ + ++ GL +K + + I + M++ S ++++++ C+
Sbjct: 382 SEIMSKGYKPDVYSYNAILSGLF-RKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
Q EEA ++ KM G G K+ D E + +G D +A L
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRL 485
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 99/247 (40%), Gaps = 37/247 (14%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
+V+ PDV N ++ R E E+E G + ++ IL+ C EG ++
Sbjct: 316 EVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIK 375
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
A E+ KG + DV +YN I+ G ++ G + EM+ G+ + TF+ ++
Sbjct: 376 RAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMV 435
Query: 350 NGYCKVGDVDSAILVYKDMLQ---------KDFRPEA-STIGM----------------- 382
GYCK + A + M +D EA S +G
Sbjct: 436 TGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSK 495
Query: 383 ------LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
L GL + +A E N + D S P S LI R EDG ++ AL+L
Sbjct: 496 AEFFDDLGNGLYLHTDL-DAYEQRVNMVLDRSVLPEFNS---LIVRASEDGDLQTALRLL 551
Query: 437 AKMAGKG 443
+MA G
Sbjct: 552 DEMARWG 558
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 105/242 (43%), Gaps = 2/242 (0%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG-EGKMREAE 292
R + FN L++ DG+++ + +EM R+G + S+ +LM C +R +
Sbjct: 525 RSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSI 584
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
L E+ +LD N ++ + K G ++ F +M ++VT+ LI +
Sbjct: 585 SLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCF 644
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
CK ++ + V+ ++ P+ + G L L K V E +++ S
Sbjct: 645 CKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQS 704
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
++ + +++L G A + ++ G+G + ++Y+ I+G D A ++
Sbjct: 705 -EACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILD 763
Query: 473 EM 474
EM
Sbjct: 764 EM 765
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 111/257 (43%), Gaps = 19/257 (7%)
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
R GD+ V + F DL+ + D + +++ M R G VP Y IL+
Sbjct: 175 RHGDTMV----NEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVR 230
Query: 285 EGKMREAEKL---WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
+ A ++ W E R + +++ + +I ++++A +++ G N
Sbjct: 231 VHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILN 290
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDML----QKDFRPEASTIGMLIEGLCEKKRVSEAL 397
S + + GY + D ++D+L + + P+ ++ LC ++ SE
Sbjct: 291 SSIYSKITIGYNEKQD-------FEDLLSFIGEVKYEPDVFVGNRILHSLC-RRFGSERA 342
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
+ + + F ++ +LI C +G ++ A+ +++ KG++PD+ Y+A + G
Sbjct: 343 YVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSG 402
Query: 458 YKKLGNDQMAATLIMEM 474
+ G Q ++ EM
Sbjct: 403 LFRKGLWQHTHCILDEM 419
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 177/455 (38%), Gaps = 92/455 (20%)
Query: 85 ALRFFFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVK 144
A++FF + N L + + +YS I+ +L R +A +IK C
Sbjct: 157 AIKFFDWMRCNGKL-VGNFVAYSLILRVLGRREEWDRAEDLIKEL--------CG----- 202
Query: 145 FFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
F K+Y+ VF+ +I +C + + + + M+ G+ P + T +L+
Sbjct: 203 -FHEFQKSYQ-------VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGL 254
Query: 205 VAK--------------------CKGSCAG----------YGIFREIFGLRDGDSKVRLR 234
K C+ + + Y E+ L D R+R
Sbjct: 255 YQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQD---RVR 311
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
+ ++ ++ + + G+ME+ E + ME G PN+ +YN L+ + KM A+ L
Sbjct: 312 LKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGL 371
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ + GL D T+Y ++I G+ ++ E+A+ +++E++ G + NS LIN K
Sbjct: 372 FHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAK 431
Query: 355 VGDVDSAILVYKDM----------------------------------LQKDFRPEASTI 380
GD D AI +DM R ++
Sbjct: 432 YGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSF 491
Query: 381 GMLIEGLCEKKRVSEALEIIR-NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKM 439
L+ + V + L ++R RD +F Y LLI E GQ+ +A+K+
Sbjct: 492 SSLVMAYVKHGMVDDCLGLLREKKWRDSAF--ESHLYHLLICSCKESGQLTDAVKIYNHK 549
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
E +L I I+ Y +G A L + +
Sbjct: 550 MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNL 584
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 4/213 (1%)
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
++ + + EM R+G PN ++N+L+ ++ ++ +L+ + G+ +DV +YNT
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNT 738
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
II + K+ K M+ G + + L++ Y K ++ + K M +
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
P+ T ++I E+ + E ++++ +++ P SY LIK G +EEA
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKE-LKESGLGPDLCSYNTLIKAYGIGGMVEEA 857
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
+ L +M G+ PD Y + ++ ND+
Sbjct: 858 VGLVKEMRGRNIIPDKVTYTNLVTALRR--NDE 888
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 129/311 (41%), Gaps = 56/311 (18%)
Query: 89 FFFTLDNSSLCLHDLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEM 148
+ L +S + L D +S +V + +A +A S+++ + + V F
Sbjct: 580 LYLNLKSSGVVL-DRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIV----PDVYLFRD 634
Query: 149 LLKTYRQCD------------------SAPFVFDLLIKSC---LELKKIDGSIEIVRMLR 187
+L+ Y++CD +++ +I C L L ++ G+ E M+R
Sbjct: 635 MLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFE--EMIR 692
Query: 188 SRGISPQIRTCNLLISCVAKCK------------------------GSCAGYGIFREIFG 223
G +P T N+L+ K K A YG ++
Sbjct: 693 -YGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTN 751
Query: 224 LRDGDSKVRLRP---DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ ++ + ++N L+ + +D +ME + M++ P+ Y+YNI++
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
++ +G + E + +E++ GL D+ +YNT+I + G +E+A KEM +
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 341 NSVTFEHLING 351
+ VT+ +L+
Sbjct: 872 DKVTYTNLVTA 882
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 150/384 (39%), Gaps = 50/384 (13%)
Query: 105 SYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFD 164
+YS+++ I +R RL +A +I R N V +L Y Q
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLV-----MLNAYSQQGKMELAES 335
Query: 165 LLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGL 224
+L+ + + G SP I N LI+ K A G+F +
Sbjct: 336 ILVS-----------------MEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRL--- 375
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
+ L PD S+ ++ G+ R E + + E++R G PN ++ L+ L
Sbjct: 376 ----CNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAK 431
Query: 285 EGKMREAEKLWEEMRVKGLRLDVTAYNTIIG----GFYKSGQIEKAEEFFKEMELGGVES 340
G A K E+M G + Y++I+G + K G+I+ K +
Sbjct: 432 YGDRDGAIKTIEDMTGIGCQ-----YSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRL 486
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N +F L+ Y K G VD + + ++ +D E+ +LI E ++++A++I
Sbjct: 487 NQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIY 546
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCED-----GQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
+ M S + L I D G+ EA KL + G D + +
Sbjct: 547 NHKME------SDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600
Query: 456 EGYKKLGNDQMAATLIMEMSRTQK 479
Y K G+ + A + ++E+ QK
Sbjct: 601 RMYVKAGSLEEACS-VLEIMDEQK 623
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 106/247 (42%), Gaps = 2/247 (0%)
Query: 228 DSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGK 287
D + + PDV+ F D++ + + + ++ ++ + + G N YN ++
Sbjct: 620 DEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALP 679
Query: 288 MREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
+ E +EEM G + +N ++ + K+ +K E F + GV + +++
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNT 738
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDV 407
+I Y K D + K+M F L++ + K++ + I++ M+
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKR-MKKS 797
Query: 408 SFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
+ P +Y ++I E G ++E + ++ G PDL Y+ I+ Y G + A
Sbjct: 798 TSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEA 857
Query: 468 ATLIMEM 474
L+ EM
Sbjct: 858 VGLVKEM 864
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 109/284 (38%), Gaps = 48/284 (16%)
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVR-----------LRPDVHSFNDLMMGFYRDGE 252
C K G+ Y + + G R+ + + FN ++ + G
Sbjct: 166 CNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGN 225
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+++ + ++ M FG PN+ + +LM L+ + EAE + MR G+ + +AY++
Sbjct: 226 VKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE-SAYSS 284
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I + + +KAEE M+ V + ++N Y + G ++ A
Sbjct: 285 MITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELA----------- 333
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
E I +M F P+ +Y LI + +ME A
Sbjct: 334 -------------------------ESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAA 368
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
L ++ G EPD Y + IEG+ + N + A E+ R
Sbjct: 369 QGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKR 412
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 93/178 (52%)
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
G+ EAE++ + MR G D Y+ ++ G K+ ++E+A +ME G + T+
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 346 EHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
LI G+CK ++D A+ + +ML+K F +++ + +LI+G + A + ++
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
+ + P + +Y+LLI +L + + EEAL L M + + + +D ++ + L +
Sbjct: 504 NANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLED 561
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 10/229 (4%)
Query: 256 IEEVW---NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+ E W +EM+ G +L +Y + F M E KL+E M + + +
Sbjct: 279 VAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSL 338
Query: 313 IIGGFYKSG----QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDM 368
++ Y SG ++ ++ E G + ++ + VG D A + K M
Sbjct: 339 LLR--YLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAM 396
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
+ P+ T L+ GLC+ KR+ EA ++ + M P K++ +LI+ C++ +
Sbjct: 397 RNAGYEPDNITYSQLVFGLCKAKRLEEARGVL-DQMEAQGCFPDIKTWTILIQGHCKNNE 455
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
+++AL A M KGF+ D + D I+G+ + A+ +MEM +
Sbjct: 456 LDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKN 504
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 211 SCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP 270
S G F E + PD +++ L+ G + +E V ++ME GC P
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFP 438
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
++ ++ IL+ C ++ +A + M KG +D + +I GF + E A F
Sbjct: 439 DIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFL 498
Query: 331 KEM-ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
EM + V+ T++ LI+ K+ + A+ + + M ++++ A +
Sbjct: 499 MEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGT 558
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
+ + L+++ + +D PS +Y +I+ +G++ +A L
Sbjct: 559 LEDAKKFLDVLSS--KD---SPSFAAYFHVIEAFYREGRLTDAKNL 599
>AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11938265-11939653 REVERSE
Length = 462
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 150/346 (43%), Gaps = 34/346 (9%)
Query: 123 LSIIKSALVSRCLFDCNNAPV-KFFEMLLKTYRQCDSAPF-----VFDLLI--------K 168
++I S+++ C C V +FF ++ Y D+ F VF+ + K
Sbjct: 120 FNVIVSSVIDEC--GCEKKVVGRFFNSMIMVYS--DNGKFSEVVEVFEYMKNNEVKIDEK 175
Query: 169 SC----LELKKIDGSIEIVRMLRSRGISPQIRTCNL----LISCVAKCKGSCAGYGIFRE 220
+C L LK+ D +E+ R S + I + ++ V C G E
Sbjct: 176 TCTLHLLNLKRCD-QMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVE 234
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
GL G ++ ++ +F ++ + + E ++ V ME+ + +L SY +L+
Sbjct: 235 EMGLVKG-----VKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLID 289
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
F GK+ EAE+L M K LR++ YN I+ G+ + G +EK E + EM GV
Sbjct: 290 GFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTP 349
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N T+ L+NG CK G V A+ ++ +F + L E + ++LE++
Sbjct: 350 NKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVV 409
Query: 401 RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEP 446
+RD F P E L L E + +EA L + G +P
Sbjct: 410 AEMIRD-GFIPGATICERLADSLFEVNR-KEAQMLITIVVKCGIKP 453
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 115/235 (48%), Gaps = 3/235 (1%)
Query: 244 MMGFYRDGEMEMIEEVWNEMERFGC-VPNLYSYNILMALFCGEGKMREAEKLWEEM-RVK 301
++ R +ME+ + ++ M G V +YS +++ + C G++ A +L EEM VK
Sbjct: 181 LLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVK 240
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G++ ++ + ++IG K E+ + K ME V + +++ LI+G+ G V+ A
Sbjct: 241 GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEA 300
Query: 362 ILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
+ M K R E+ +++ G V + +E+ + M P++ +Y +L+
Sbjct: 301 ERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELY-SEMSSRGVTPNKDTYWVLMN 359
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
LC+ G++ EA+ ++ FE D ++Y E ++G + ++ EM R
Sbjct: 360 GLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIR 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
+N ++ ++ GK E +++E M+ +++D + + Q+E A +FF M
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 335 LGGVESNSV-TFEHLINGYCKVGDVDSAILVYKDM-LQKDFRPEASTIGMLIEGLCEKKR 392
G++ +V + ++ C G++ A + ++M L K + T +I G C K+
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRW 260
Query: 393 VSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYD 452
E L+++ M S SY++LI G++EEA +L M K + +Y+
Sbjct: 261 DFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN 320
Query: 453 AFIEGYKKLGNDQMAATLIMEMS 475
+ GY + G + L EMS
Sbjct: 321 LIMNGYSRFGLVEKVIELYSEMS 343
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 250 DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTA 309
+G +E +V +M + P ++ FC +REA+ L++ M +GL D+
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
Y +I + + +++KAE F++M+ G++ + VT+ L++ Y K+
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD------------- 675
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQM 429
PE ++G K++ SE L A + Y +LI R C+ +
Sbjct: 676 -----PEHHETCS-VQGEVGKRKASEVLREFSAAGIGLDVV----CYTVLIDRQCKMNNL 725
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
E+A +L +M G EPD+ Y I Y + G MA TL+ E+S+
Sbjct: 726 EQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSK 772
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
YN+ G++ EA +L +EM+ +G+ DV Y T+I G+ G++ A + EM
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G+ + +T+ L++G + G + + +Y+ M + +P A T ++IEGLC ++V
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 395 EALEIIRNAMRDVSFCP---------------SRKSYELLIK---------------RLC 424
EA + + + CP S+K+Y+ ++ LC
Sbjct: 511 EAEDFFSSLEQK---CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
+G +E+A + KM+ EP + I + KL N + A L M
Sbjct: 568 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 176 IDGSIE----IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKV 231
I+G +E +++ + + + P C +I K RE L D +
Sbjct: 568 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNN-------VREAQVLFDTMVER 620
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC-------- 283
L PD+ ++ ++ + R E++ E ++ +M++ G P++ +Y +L+ +
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHE 680
Query: 284 -----GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
GE R+A ++ E G+ LDV Y +I K +E+A E F M G+
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
E + V + LI+ Y + G +D A+ + ++ +K P S
Sbjct: 741 EPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSES 780
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 128/303 (42%), Gaps = 29/303 (9%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISC--------------VAKCKGSCAGYGIFR--EIF 222
++ +R L+ G+SP + L+ V K G+ + E+
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVI 132
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
G + K R + L+ + G + +V + +R CV ++ + N LM
Sbjct: 133 G-EQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRM 191
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
GK+ L+++++ GL + Y ++ + G +E+A +E+ S
Sbjct: 192 TEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL-------IENES 244
Query: 343 V-TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE---ASTIGMLIEGLCEKKRVSEALE 398
V ++ ING C G+ + A+ + +++ + + + +GM++ G C + ++ A
Sbjct: 245 VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAES 304
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+I M ++ F + +I R C++ + EAL KM GKG + + I ++ Y
Sbjct: 305 VIIE-MEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 459 KKL 461
K+
Sbjct: 364 CKM 366
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 133/301 (44%), Gaps = 9/301 (2%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
++++ +K + K ++ S ++ + RGI P T +ISC + G+ +
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQ-------NGVPKR 228
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+ S PD + ++ + R G ++M +++ + +++ L+
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVES 340
++ G ++EEM+ G++ ++ YN +I ++ + +A+ +K++ G
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 341 NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII 400
N T+ L+ Y + D A+ +Y++M +K L+ + + V EA EI
Sbjct: 349 NWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIF 408
Query: 401 RNAMRDVSFC-PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
++ M++ C P ++ LI G++ EA +M GFEP L + + I+ Y
Sbjct: 409 QD-MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYG 467
Query: 460 K 460
K
Sbjct: 468 K 468
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 115/309 (37%), Gaps = 52/309 (16%)
Query: 144 KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDG-SIEIVRMLRSRGISPQIRTCNLLI 202
K F+ +L+ + D+A F I SC + ++E + S G P T +I
Sbjct: 196 KLFDEMLERGIKPDNATFT---TIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMI 252
Query: 203 SCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
+ G L D + R D +F+ L+ + G + ++ E
Sbjct: 253 DAYGRA-------GNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEE 305
Query: 263 MERFGCVPNLYSYNILM--------------------------------ALFCGEGKMR- 289
M+ G PNL YN L+ AL G+ R
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 290 --EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME-LGGVESNSVTFE 346
+A ++ EM+ KGL L V YNT++ + +++A E F++M+ + +S TF
Sbjct: 366 GDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFS 425
Query: 347 HLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR- 405
LI Y G V A M + F P + +I+ + K+V + + +
Sbjct: 426 SLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLEL 485
Query: 406 ----DVSFC 410
D FC
Sbjct: 486 GITPDDRFC 494
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 15/261 (5%)
Query: 191 ISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRD 250
I P RT N+LI K + F + + D PDV ++ + + ++
Sbjct: 269 IKPDARTFNILIHGFCKARK-------FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE 321
Query: 251 GEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY 310
G+ + E+ EM GC PN+ +Y I+M ++ EA ++E+M+ G D Y
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 311 NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
+++I K+G+ + A E F++M GV + + + +I+ + A+ + K M
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 371 KDFR---PEASTIGMLIEGLCEKKRVSEALEIIRNAM--RDVSFCPSRKSYELLIKRLCE 425
++ P T L++ K+ + L I+ + M DVS S +Y LLI+ LC
Sbjct: 442 EEGESCSPNVETYAPLLKMC-CHKKKMKLLGILLHHMVKNDVSIDVS--TYILLIRGLCM 498
Query: 426 DGQMEEALKLQAKMAGKGFEP 446
G++EEA + KG P
Sbjct: 499 SGKVEEACLFFEEAVRKGMVP 519
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 46/288 (15%)
Query: 147 EMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
E+ LK + F++LI + +K D + ++ +++ +P + T + A
Sbjct: 260 EVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVE--A 317
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
CK G FR + + + + P+V ++ +M + ++ V+ +M+
Sbjct: 318 YCKE-----GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED 372
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
GCVP+ Y+ L+ + G+ ++A +++E+M +G+R DV YNT+I + E A
Sbjct: 373 GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMA 432
Query: 327 EEFFKEMELGGVESNSVTFEH--------------------------------------L 348
K ME ES S E L
Sbjct: 433 LRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILL 492
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
I G C G V+ A L +++ ++K P ST ML++ L EKK ++EA
Sbjct: 493 IRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL-EKKNMAEA 539
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 8/229 (3%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFG-CVPNLYSYNILMALFCGEGKMREAEKL 294
DV S+N ++ G+ ++G E++N ME G N ++ ++ G +R+ KL
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ GL LDV ++ + K G++E A F ++ NSV + LI +
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP----RVNSVPWNTLIACHGF 529
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
G + A++++K+ML + +P+ T L+ V E D PS K
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
Y ++ GQ+E ALK M+ +PD I+ A + + GN
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSACRVHGN 635
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 104/246 (42%), Gaps = 36/246 (14%)
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
+ G L+ N L+ L+ G++R+ +K+++ M V+ D+ ++N+II + + Q
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR----DLISWNSIIKAYELNEQPL 330
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIG--- 381
+A F+EM L ++ + +T L + ++GD+ + V L+K + E TIG
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 382 -----------------------------MLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
+I G + SEA+E+ + +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
+ ++ ++ + G + + +KL ++ G D+ + + + Y K G + A +L
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 473 EMSRTQ 478
++ R
Sbjct: 511 QIPRVN 516
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 148/325 (45%), Gaps = 24/325 (7%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC----KGSCAGYGIF 218
++++IK+ K + + E+ + S G++P T N L+ +A KG C
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY----- 562
Query: 219 REIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
+ +R+ D + ++ F + G++ M EEV+ EM + P++ Y +L
Sbjct: 563 --LEKMRE----TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ F G +++A E M+ G+ + YN++I + K G +++AE ++++
Sbjct: 617 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 339 ES---NSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS--TIGMLIEGLCEKKRV 393
++ + T +IN Y + V A ++ M Q R EA+ T M++ + R
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ---RGEANEFTFAMMLCMYKKNGRF 733
Query: 394 SEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDA 453
EA +I + MR++ SY ++ DG+ +EA++ +M G +PD + +
Sbjct: 734 EEATQIAKQ-MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS 792
Query: 454 FIEGYKKLGNDQMAATLIMEMSRTQ 478
KLG + A I E+ + +
Sbjct: 793 LGTILMKLGMSKKAVRKIEEIRKKE 817
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 136/287 (47%), Gaps = 20/287 (6%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIK----SALVSRCLFDCN--NAPVKF--FEMLLKTY 153
D +Y+T+V IL+ A + + ++ + VS C+ C ++ VK M + Y
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 154 RQ-----CDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKC 208
++ + V+ +LI + + + ++ V ++ GI N LI K
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 209 KGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM-EMIEEVWNEMERFG 267
I+R++ +K + PDV++ N M+ Y + M E +++ M++ G
Sbjct: 659 GYLDEAEAIYRKLL---QSCNKTQY-PDVYTSN-CMINLYSERSMVRKAEAIFDSMKQRG 713
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
N +++ +++ ++ G+ EA ++ ++MR + D +YN+++G F G+ ++A
Sbjct: 714 -EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAV 772
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
E FKEM G++ + TF+ L K+G A+ +++ +K+ +
Sbjct: 773 ETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 44/259 (16%)
Query: 258 EVWNEMERFGCVP-NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG 316
E++ + GC N+ YNI++ + K R + LW+EM KG++ + Y T+I
Sbjct: 172 EIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDV 231
Query: 317 FYKSG-----------------------------------QIEKAEEFFKEMELGGVESN 341
+ K G + +KAEEFFK+ +++
Sbjct: 232 YSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKAD 291
Query: 342 ------SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSE 395
S T+ +I+ Y K G + A +K ML++ P T +I ++ E
Sbjct: 292 SHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGE 351
Query: 396 ALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
+++ + P ++Y +LI ++ +E A +M G +PD Y +
Sbjct: 352 VTSLMKTM--KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL 409
Query: 456 EGYKKLGNDQMAATLIMEM 474
+ + A LI EM
Sbjct: 410 YAFSIRHMVEEAEGLIAEM 428
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/424 (19%), Positives = 161/424 (37%), Gaps = 65/424 (15%)
Query: 105 SYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKFFEMLLKTYRQ--------- 155
+Y T++ + S+ LKV AL + +S+ + + K R+
Sbjct: 224 TYGTLIDVYSKGGLKVHALCWL--GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFK 281
Query: 156 ---CDS---------APFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLIS 203
CD + + ++ +I + + +I + E + + GI P T N +I
Sbjct: 282 KWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIH 341
Query: 204 CVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
G E+ L K+ PD ++N L+ ++ ++E + EM
Sbjct: 342 IYGN-------NGQLGEVTSLMK-TMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEM 393
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
+ G P+ SY L+ F + EAE L EM + +D + + + ++ +
Sbjct: 394 KDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEML 453
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY--------KDMLQKDFRP 375
EK+ +FK + G S S + I+ Y + G + A V+ + +++ +
Sbjct: 454 EKSWSWFKRFHVAGNMS-SEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMI 512
Query: 376 EASTIGMLIEGLCE-------------KKRVSEALEIIRNA------------MRDVSFC 410
+A I E CE K + ++I+ +A MR+ +
Sbjct: 513 KAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYV 572
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
Y +I + GQ+ A ++ +M EPD+ +Y I + GN Q A +
Sbjct: 573 SDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSY 632
Query: 471 IMEM 474
+ M
Sbjct: 633 VEAM 636
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 175 KIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR 234
K + + + + +++ S R LI+ + K G+ +E+ G G+++ R
Sbjct: 817 KAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT---FAQEMLGDLSGEAR---R 870
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
+ F+D++ R ++ + + +M G P +N+++ G + EA+++
Sbjct: 871 RGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEV 930
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+ M +GL+ DV Y II G+ K G +++A+E E + + + VT+ LI GYCK
Sbjct: 931 LKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCK 990
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
+ + D A+ + +M + +P A LI+ C K E E++ M+
Sbjct: 991 IEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMK 1041
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
VF+L++ +C + +D + E+++++ SRG+ P + T ++IS AK G+ E
Sbjct: 910 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKG-------GMMDEA 962
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ K + +++ L+ G+ + E + ++ NEM+RFG PN YN L+
Sbjct: 963 QEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 1022
Query: 282 FCGEG-KMREAEKLWEEMRVKGLRLDVTAYNTI 313
FC + +AE L+EEM+ KGL L+ + I
Sbjct: 1023 FCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI 1055
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 16/248 (6%)
Query: 240 FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMR 299
N+L+ F + G+ + +V+++ E FG PN +Y + + C M A + E+M
Sbjct: 735 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 794
Query: 300 VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT---FEHLINGYCKVG 356
G+ + II F K G KAEE + EL + S+ LI CK
Sbjct: 795 KSGVLSEGEQMGNIITWFCKEG---KAEEAYSVYELAKTKEKSLPPRFVATLITALCK-- 849
Query: 357 DVDSAILVYKDMLQKDFRPEASTIGM-----LIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
D I ++ML D EA G+ +I LC + V +A ++ + M P
Sbjct: 850 -NDGTITFAQEML-GDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLD-MISKGPAP 906
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
+ L++ + G ++EA ++ M +G +PD+ Y I GY K G A ++
Sbjct: 907 GNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEIL 966
Query: 472 MEMSRTQK 479
E + K
Sbjct: 967 AEAKKKHK 974
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 115/286 (40%), Gaps = 13/286 (4%)
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFR--EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
+ N LI+ K S A + +F E FG P+ ++ + +
Sbjct: 731 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFT---------PNAKTYYLTLEALCKRS 781
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYN 311
M+ V +M + G + ++ FC EGK EA ++E + K L
Sbjct: 782 FMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA 841
Query: 312 TIIGGFYKS-GQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ 370
T+I K+ G I A+E ++ F +I+ C++ +V A + DM+
Sbjct: 842 TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMIS 901
Query: 371 KDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME 430
K P + +++ + + EA E+++ M P +Y ++I + G M+
Sbjct: 902 KGPAPGNAVFNLVVHACSKTGDLDEAKEVLK-LMESRGLKPDVYTYTVIISGYAKGGMMD 960
Query: 431 EALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
EA ++ A+ K + Y A I GY K+ A L+ EM R
Sbjct: 961 EAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDR 1006
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
+P + ++ AL +G + A+++ ++ + R + ++ +I + ++ A+
Sbjct: 835 LPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKA 894
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLC 388
+M G + F +++ K GD+D A V K M + +P+ T ++I G
Sbjct: 895 LLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYA 954
Query: 389 EKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
+ + EA EI+ A + S +Y LI+ C+ + +EALKL +M G +P+
Sbjct: 955 KGGMMDEAQEILAEAKKKHKKL-SPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNA 1013
Query: 449 KIYDAFIEGY 458
Y+ I+ +
Sbjct: 1014 DEYNKLIQSF 1023
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
F +I S ++ + + ++ + S+G +P NL++ +K +E+
Sbjct: 876 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKT----GDLDEAKEVL 931
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
L + L+PDV+++ ++ G+ + G M+ +E+ E ++ + +Y+ L+ +
Sbjct: 932 KLMESRG---LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 988
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGF-YKSGQIEKAEEFFKEMELGGVESN 341
C + EA KL EM G++ + YN +I F K+ EKAE F+EM+ G+ N
Sbjct: 989 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 1048
Query: 342 SVT 344
+++
Sbjct: 1049 AIS 1051
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 7/203 (3%)
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLR-----LDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
L+ + + +A LW+ ++ G + L++ N +I F K G+ + A + F +
Sbjct: 698 LLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSK 757
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
E G N+ T+ + CK +D A V + ML+ E +G +I C++ +
Sbjct: 758 TEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGK 817
Query: 393 VSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE-DGQMEEALKLQAKMAGKGFEPDLKIY 451
EA + A P R LI LC+ DG + A ++ ++G+ +K +
Sbjct: 818 AEEAYSVYELAKTKEKSLPPR-FVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPF 876
Query: 452 DAFIEGYKKLGNDQMAATLIMEM 474
I ++ N + A L+++M
Sbjct: 877 SDVIHSLCRMRNVKDAKALLLDM 899
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 138/316 (43%), Gaps = 22/316 (6%)
Query: 160 PFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFR 219
PFV + LI+ E + + S+ ++ G+ P T ++ +K G +
Sbjct: 91 PFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHA 150
Query: 220 EIF-GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
D DS VRL S D+ + + G+++ +V+ E ++ +N+L
Sbjct: 151 ATLKNFVDCDSFVRL-----SLVDM---YAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 279 MALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
+ +C M A L+ M + + +++T+I G+ SG++ +A++ F+ M
Sbjct: 203 INGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMP---- 254
Query: 339 ESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALE 398
E N V++ LING+ + GD ++AI Y +ML+K +P TI ++ + + +
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 399 IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
I + D R L+ + G+++ A + + M K D+ + A I+G+
Sbjct: 315 -IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGW 369
Query: 459 KKLGNDQMAATLIMEM 474
G A +M
Sbjct: 370 AVHGRFHQAIQCFRQM 385
>AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19763152-19765136 FORWARD
Length = 495
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 20/272 (7%)
Query: 150 LKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCK 209
+K+ C + +LIKS L++ D +++ +R +GI P T + S + +
Sbjct: 211 MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITFVEMESTLIQML 270
Query: 210 GSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV 269
G + D K PD + N + F +G++EM+E + + + G
Sbjct: 271 G---------------EDDCK----PDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIE 311
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
PN+ ++NIL+ + G ++ + E M+ + YN +I F ++G +++ E
Sbjct: 312 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYL 371
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
F+ M+ + + VT L+ Y + D V + + D R + L++
Sbjct: 372 FRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGR 431
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLIK 421
++ +E ++ + M F P + +Y ++K
Sbjct: 432 MEKFAE-MKGVLELMEKKGFKPDKITYRTMVK 462
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 50/239 (20%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
+P+V + L++ + + E E++ EM GCV N Y L++ + G+ A
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 294 LWEEMRVK-GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
L E M+ + DV Y+ +I F + +K ++ +M G+ N++TF +
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITFVEM---- 262
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
E++ I ML E C+ P
Sbjct: 263 -----------------------ESTLIQMLGEDDCK---------------------PD 278
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN-DQMAATL 470
+ ++ +GQ+E K G EP+++ ++ ++ Y K GN +M+A +
Sbjct: 279 SWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVM 337
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 115/215 (53%), Gaps = 27/215 (12%)
Query: 225 RDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCG 284
RD K+ R V ++N ++ G+ + EM ++++ M + V ++N +++ +
Sbjct: 60 RDIFEKLEARNTV-TWNTMISGYVKRREMNQARKLFDVMPKRDVV----TWNTMISGYVS 114
Query: 285 EGKMR---EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
G +R EA KL++EM + D ++NT+I G+ K+ +I +A F++M E N
Sbjct: 115 CGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMP----ERN 166
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+V++ +I G+C+ G+VDSA+++++ M KD P + L+ GL + +R+SEA ++
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLG 222
Query: 402 NAMRDVSFCPSRK----SYELLIKRLCEDGQMEEA 432
S R+ +Y LI + GQ+E A
Sbjct: 223 QYG---SLVSGREDLVYAYNTLIVGYGQRGQVEAA 254
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 165/406 (40%), Gaps = 62/406 (15%)
Query: 103 LYSYSTIVHILSRARLKVQALSIIKSALVSRCLFD------------------CNNAPVK 144
+Y+Y+T++ + R +V+A +RCLFD C N V
Sbjct: 235 VYAYNTLI-VGYGQRGQVEA---------ARCLFDQIPDLCGDDHGGEFRERFCKN--VV 282
Query: 145 FFEMLLKTYRQCD---SAPFVFDLLI-KSCLELKK-IDGSIEIVRM-----LRSRGISPQ 194
+ ++K Y + SA +FD + + + IDG + + RM L S +
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
Query: 195 IRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVH--SFNDLMMGFYRDGE 252
+ N+++S A S + R F P+ H S+N ++ + ++ +
Sbjct: 343 AHSWNMMVSGYA----SVGNVELARHYF---------EKTPEKHTVSWNSIIAAYEKNKD 389
Query: 253 MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
+ +++ M G P+ ++ L++ G +R ++ ++ VK + DV +N
Sbjct: 390 YKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM-HQIVVKTVIPDVPVHNA 448
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I + + G+I ++ F EM+L + +T+ +I GY G+ A+ ++ M
Sbjct: 449 LITMYSRCGEIMESRRIFDEMKL---KREVITWNAMIGGYAFHGNASEALNLFGSMKSNG 505
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA 432
P T ++ V EA + M P + Y L+ GQ EEA
Sbjct: 506 IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEA 565
Query: 433 LKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
+ + M FEPD ++ A ++ + N +A MSR +
Sbjct: 566 MYIITSMP---FEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLE 608
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 40/255 (15%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKM-REAEKLWEE 297
S++ ++ GF ++GE++ ++ +M P L AL G K R +E W
Sbjct: 169 SWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-------LCALVAGLIKNERLSEAAWVL 221
Query: 298 MR----VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM-ELGGVE----------SNS 342
+ V G V AYNT+I G+ + GQ+E A F ++ +L G + N
Sbjct: 222 GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV 281
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
V++ +I Y KVGDV SA L++ M +D + +I+G R+ +A +
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMKDRD----TISWNTMIDGYVHVSRMEDAFALF-- 335
Query: 403 AMRDVSFCPSRK--SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
S P+R S+ +++ G +E A K E +++ I Y+K
Sbjct: 336 -----SEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTP----EKHTVSWNSIIAAYEK 386
Query: 461 LGNDQMAATLIMEMS 475
+ + A L + M+
Sbjct: 387 NKDYKEAVDLFIRMN 401
>AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076) |
chr3:11238421-11240125 FORWARD
Length = 540
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 153/358 (42%), Gaps = 45/358 (12%)
Query: 141 APVKFFEMLLKTYRQCDSAP--------FVFDLLIKSCLELKKIDGSIEIVRMLRSRG-I 191
A VK E L+ +R+ + P +++ I C + + + I R+++ G I
Sbjct: 187 AEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHI 246
Query: 192 SPQIRTCNLLISCVAKCKGSCAGYGIFREI----FGLRDGDS------------------ 229
+I T +LL+S +C S ++ E+ LR+
Sbjct: 247 GTEI-TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALK 305
Query: 230 ------KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
K ++P++ + N L+ + G++ ++ +V++ ++ G P+ Y++N L+
Sbjct: 306 IFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALY 365
Query: 284 GEGKMREAEKLWEEMRVKGLR-LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
+ + +L++ +R + L L+ YNT + K G EKA + EME G+ ++
Sbjct: 366 KANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVST 425
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
++ +I+ K A+LVY+ M Q+D +P T L+ E +I++
Sbjct: 426 SSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKK 485
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
DVS Y I +C + + A +L KM G EPD K ++ KK
Sbjct: 486 VEPDVSL------YNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 132/338 (39%), Gaps = 38/338 (11%)
Query: 173 LKKIDGSIEIVRMLRSRGISPQIRTCNLLISC---------------------------- 204
L K+ ++E+ +R G+ P CN +SC
Sbjct: 120 LDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTY 179
Query: 205 ------VAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
VA+ KG + +FRE+ + + K R DV +N + R + E
Sbjct: 180 SLMLKAVAEVKGCESALRMFREL----EREPKRRSCFDVVLYNTAISLCGRINNVYETER 235
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
+W M+ G + +Y++L+++F G+ A +++EM + L A +I
Sbjct: 236 IWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACT 295
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
K + + A + F+ M G++ N V LIN K G V VY + +P+
Sbjct: 296 KEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEY 355
Query: 379 TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAK 438
T L+ L + R + L++ + C + Y + + G E+A+KL +
Sbjct: 356 TWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYE 415
Query: 439 MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
M G G Y+ I +K ++A + M++
Sbjct: 416 MEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQ 453
>AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:644458-648421 REVERSE
Length = 852
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 145/330 (43%), Gaps = 47/330 (14%)
Query: 93 LDNSSLCLHDLYSYSTIVHILSRARLKVQALSI---IKSALV-------SRCLFDCNNAP 142
+++S L D ++Y TI+ + + A++ AL + +KS V S + C NA
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 143 V-----KFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRT 197
+ FE +L + C+ F++L+ +C+E + D + + + + ++ +
Sbjct: 424 LVEQANHLFEEMLAS--GCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYA 481
Query: 198 CNLLISCVAKCKGSCAGYGIFRE----IFGLRDGDS-------KVRLRPDVHSFNDLMMG 246
+++ KG + I + R+ +S + +P ++N L+
Sbjct: 482 DDIV------SKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA 535
Query: 247 ----FYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
+YR +E+ +EM+ G PN +++ L+ + G G + A ++ M G
Sbjct: 536 CGTDYYRG------KELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAG 589
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG---DVD 359
R DV AY T I ++ ++ A F+EM ++ N VT+ L+ K G +V
Sbjct: 590 TRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVR 649
Query: 360 SAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
+ +Y+DM ++P + LIE CE
Sbjct: 650 QCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 192 SPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDG 251
+P + C +I C I+ ++ K ++P+++ N LM D
Sbjct: 264 TPNMYICRTMIDVCGLCGDYVKSRYIYEDLL-------KENIKPNIYVINSLMNVNSHD- 315
Query: 252 EMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE---MRVKGL-RLDV 307
+ +V+ M+ ++ SYNIL+ C G++ A+ +++E M GL +LD
Sbjct: 316 -LGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDA 374
Query: 308 TAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKD 367
Y TII F + + A + +M+ GV N+ T+ LI+ G V+ A ++++
Sbjct: 375 FTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEE 434
Query: 368 MLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
ML P + +L+ E + A + ++
Sbjct: 435 MLASGCEPNSQCFNILLHACVEACQYDRAFRLFQS 469
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 104/220 (47%), Gaps = 9/220 (4%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE-GKMREAEKLWEEMRVK 301
++ GF + G+M + + ++ PN+Y ++ + CG G ++ ++E++ +
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDV-CGLCGDYVKSRYIYEDLLKE 296
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
++ ++ N+++ S + + +K M++ V ++ ++ L+ C G VD A
Sbjct: 297 NIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLA 354
Query: 362 ILVYKDMLQKD----FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYE 417
+YK+ + + + +A T +I+ + K AL++ ++ M+ V P+ ++
Sbjct: 355 QDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKV-KDDMKSVGVTPNTHTWS 413
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG 457
LI G +E+A L +M G EP+ + ++ +
Sbjct: 414 SLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 132/343 (38%), Gaps = 58/343 (16%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
FVF L+K+C L GSI+ R + I + ++ S + C +
Sbjct: 106 FVFSALVKACANL----GSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+F +R++ + S+ ++ G+ + G E E++ R V NLYS+ L++
Sbjct: 162 VF------DSIRVKNTI-SWTAMVSGYAKSGRKEEALELF----RILPVKNLYSWTALIS 210
Query: 281 LFCGEGKMREAEKLWEEMR----------------------------------VKGLRLD 306
F GK EA ++ EMR V L D
Sbjct: 211 GFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFD 270
Query: 307 VTAY--NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILV 364
+ N +I + K + A++ F M + V++ LI G + G + A+ +
Sbjct: 271 SCVFISNALIDMYAKCSDVIAAKDIFSRMR----HRDVVSWTSLIVGMAQHGQAEKALAL 326
Query: 365 YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLC 424
Y DM+ +P T LI V + E+ ++ +D PS + Y L+ L
Sbjct: 327 YDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLG 386
Query: 425 EDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
G ++EA L M F PD + A + K+ G QM
Sbjct: 387 RSGLLDEAENLIHTMP---FPPDEPTWAALLSACKRQGRGQMG 426
>AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24528423-24529988 REVERSE
Length = 521
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 23/226 (10%)
Query: 254 EMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTI 313
+M++ NE+ P+ ++L++ +C K+ EA +L EM G + AYN +
Sbjct: 232 KMVKNTANEI-----FPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMM 286
Query: 314 IG----------GFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAIL 363
+ F ++EK EME GV N+ TF LIN CK+ + A+
Sbjct: 287 LDCVCKLCRKKDPFKLQPEVEKV---LLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMT 343
Query: 364 VYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP--SRKSYELLIK 421
++ M + +P+A T +LI L + R+ E E+I + M+ + ++K Y +K
Sbjct: 344 LFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMI-DKMKSAGYGELLNKKEYYGFLK 402
Query: 422 RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
LC ++E A+ + M G +P +K YD + K N+Q+
Sbjct: 403 ILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLM--GKMCANNQLT 446
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 131/338 (38%), Gaps = 50/338 (14%)
Query: 167 IKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRD 226
++S + +D + ++ R P + TCN +I+ + + K +F+ F
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFF---- 207
Query: 227 GDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNE-MERFGCVPNLYSYNILMALFCGE 285
+ + P+V S+N ++ +G ++ EV+ + P+ +Y L
Sbjct: 208 --KQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM------------ 333
G++ +A L EM KG D T YN +I G+ G +KA EFF E+
Sbjct: 266 GRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVN 325
Query: 334 --------ELGGVESNSVTFEHLING---------------YCKVGDVDSAILVYKDMLQ 370
E G + ++ L++ + K G D A ++ +ML
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 371 KDFRP-----EASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP---SRKSYELLIKR 422
P + T+G+++ + SEA+ + V+ P Y ++ R
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445
Query: 423 LCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
CE G + EA + A+ + D + A I+ Y K
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLK 483
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQM 429
Q + P + +I C++ V EALE+ R+ + + F PS +Y L K L + G++
Sbjct: 209 QSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRI 268
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
+A L +M KG D +Y+ I GY LG+
Sbjct: 269 GDAASLLREMLSKGQAADSTVYNNLIRGYLDLGD 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 291 AEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA----EEFFKEMELGGVESNSVTFE 346
A KL + R V N II Y++ + ++ + FFK+ + N V++
Sbjct: 164 ASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQ---SNIVPNVVSYN 220
Query: 347 HLINGYCKVGDVDSAILVYKDML-QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
+IN +C G+VD A+ VY+ +L F P + T L +GL + R+ +A ++R +
Sbjct: 221 QIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLS 280
Query: 406 DVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
S Y LI+ + G ++A++ ++ K D + F+E + + GND+
Sbjct: 281 KGQAADS-TVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDK 339
Query: 466 MA 467
A
Sbjct: 340 EA 341
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 134/303 (44%), Gaps = 22/303 (7%)
Query: 147 EMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSR-GISPQIRTCNLLISCV 205
EML K + DS V++ LI+ L+L D ++E L+S+ + I +
Sbjct: 277 EMLSKG-QAADST--VYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWF 333
Query: 206 AKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER 265
K A +R + D K R+ P + N L+ F + G+ + ++NEM
Sbjct: 334 EKGNDKEA-MESYRSLL-----DKKFRMHPP--TGNVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 266 FGCVPNLYSYNI-LMALFCGE----GKMREA----EKLWEEMRVKGLRLDVTAYNTIIGG 316
PN+ S N + + E G+ EA +K+ ++ K +D Y I+
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
F + G + +AE FF E + +++ + +I+ Y K +D A+ + M+ + R
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVV 505
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
A + L + +++E+ E++ M + P Y+++++ LC+ +++A +
Sbjct: 506 ADFGARVFGELIKNGKLTESAEVL-TKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIV 564
Query: 437 AKM 439
+M
Sbjct: 565 GEM 567
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ D+D+A + + + + RP T +I + KR SE++ + + + + P+
Sbjct: 157 RASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNV 216
Query: 414 KSYELLIKRLCEDGQMEEALKL-QAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
SY +I C++G ++EAL++ + +A F P Y +G + G AA+L+
Sbjct: 217 VSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLR 276
Query: 473 EM 474
EM
Sbjct: 277 EM 278
>AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9158380-9159897 FORWARD
Length = 505
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
P+ +Y ++ FC G + EA KLW M +G +D+ A I+ K Q ++A +
Sbjct: 213 PDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKV 272
Query: 330 FKEM--ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
F M + GG + + + +I+ CK G +D A V+ +M ++ + T LI GL
Sbjct: 273 FYVMVSKRGG-DLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGL 331
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
K+RV EA ++ P Y LIK L + + EA ++ KM +G EP
Sbjct: 332 LVKRRVVEAYGLVEGVEN-----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPI 386
Query: 448 LKIYDAFIEGY 458
+ Y ++G+
Sbjct: 387 MHTYLMLLQGH 397
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 185/459 (40%), Gaps = 70/459 (15%)
Query: 17 IKAYHLYSSASTP----PSDQSHIVSTVVSLLIHHRSKSRWTNLRSLLYSTK-TLTPIHF 71
I + +S+ TP P +Q H++ V +++ + S + L S L STK LT F
Sbjct: 23 ILNHRFFSTELTPTTITPINQDHLLR--VCTILYQQQNSPDSRLVSKLSSTKFQLTHEFF 80
Query: 72 SQIALQLKSNPHLALRFFFFTLDNSSLCLHDLYSYSTIVHILSRAR----LKVQALSIIK 127
Q+ + RFF ++ + H + + ++ I+ +R A I K
Sbjct: 81 LQVCNNFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGK 140
Query: 128 SALVSRCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLR 187
LV+ K F ++LKT + S ELKK + ++
Sbjct: 141 RGLVND----------KTFRIVLKT--------------LASARELKK---CVNYFHLMN 173
Query: 188 SRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGF 247
G + T N + + K K +F ++ K ++PD ++ ++ GF
Sbjct: 174 GFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL--------KEFIKPDEITYRTMIQGF 225
Query: 248 YRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK-GLRLD 306
G++ ++WN M G ++ + +M + + EA K++ M K G LD
Sbjct: 226 CDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLD 285
Query: 307 VTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYK 366
Y +I K+G+I+ A + F EM GV +++T+ LI G V ++
Sbjct: 286 GGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLL----VKRRVVEAY 341
Query: 367 DMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCED 426
+++ P+ S LI+GL + KR SEA E+ R +I+R CE
Sbjct: 342 GLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRK----------------MIQRGCEP 385
Query: 427 GQMEEALKLQAKM---AGKGFEPDLKIYDAFIEGYKKLG 462
+ LQ + KG +P + F+ G K G
Sbjct: 386 IMHTYLMLLQGHLGRRGRKGPDPLVNFDTIFVGGMIKAG 424
>AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 257 EEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG 316
+E++ +M+ G +PN + ++ C +G ++EA KL+ MR KG +V Y ++
Sbjct: 119 DEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
F K+ +IE A+ F++M+ G+ N+ ++ L+ G +D A+ +ML+ P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 377 ASTIGMLIEGLCEKKRVSEALEII 400
T L++ LC K V +A I
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAI 259
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
++ G +DG ++ +++ M G +P + Y ++ FC K+ +A++++ +M+ G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI 362
+ + +Y ++ G Y ++ A F EM G N TF L++ C+V V+ A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 363 LVYKDMLQKDF 373
+ QK F
Sbjct: 257 SAIDTLNQKGF 267
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
E ++E FK+M+ GG+ N+V +++G CK G V A+ ++ M K PE +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
+E C+ ++ +A I R M++ P+ SY +L++ L +++A+ ++M G
Sbjct: 173 VEAFCKAHKIEDAKRIFRK-MQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLI 471
P++ + ++ ++ + A + I
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAI 259
>AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 257 EEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG 316
+E++ +M+ G +PN + ++ C +G ++EA KL+ MR KG +V Y ++
Sbjct: 119 DEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
F K+ +IE A+ F++M+ G+ N+ ++ L+ G +D A+ +ML+ P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPN 235
Query: 377 ASTIGMLIEGLCEKKRVSEALEII 400
T L++ LC K V +A I
Sbjct: 236 VPTFVELVDALCRVKGVEQAQSAI 259
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%)
Query: 243 LMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKG 302
++ G +DG ++ +++ M G +P + Y ++ FC K+ +A++++ +M+ G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 303 LRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAI 362
+ + +Y ++ G Y ++ A F EM G N TF L++ C+V V+ A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 363 LVYKDMLQKDF 373
+ QK F
Sbjct: 257 SAIDTLNQKGF 267
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
E ++E FK+M+ GG+ N+V +++G CK G V A+ ++ M K PE +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 384 IEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
+E C+ ++ +A I R M++ P+ SY +L++ L +++A+ ++M G
Sbjct: 173 VEAFCKAHKIEDAKRIFRK-MQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 444 FEPDLKIYDAFIEGYKKLGNDQMAATLI 471
P++ + ++ ++ + A + I
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAI 259
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 133/318 (41%), Gaps = 23/318 (7%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
+ F ++ +C L I+ +I + I + LI KCK C Y +
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK--CLHYA--KT 326
Query: 221 IFGLRDGDSKVRLR-PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILM 279
+F R++ +V S+ +++G+ + G E +++ +M+R G P+ Y+ +
Sbjct: 327 VFD--------RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 280 ALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVE 339
+ + E + + GL VT N+++ + K G I+ + F EM +
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV---- 434
Query: 340 SNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI 399
++V++ +++ Y + G I ++ M+Q +P+ T+ +I V +
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 400 IRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYK 459
+ + PS Y +I G++EEA++ + G F PD + + +
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF---INGMPFPPDAIGWTTLLSACR 551
Query: 460 KLGN---DQMAATLIMEM 474
GN + AA ++E+
Sbjct: 552 NKGNLEIGKWAAESLIEL 569
>AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:172256-174137 FORWARD
Length = 577
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
++KG + D Y T++ F ++G+I+ F M+ GV ++VT+ LI+ GDV
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
D A+ ++++M P + ++ L RV EA E+ + +R P+ +Y +
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRS-RVSPNCHTYTV 232
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
L++ L G+ EEAL + KM G +PD + I K G +++ M
Sbjct: 233 LMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYM 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
++Y ++ +F G+++ ++ M+ KG+ +D Y ++I SG ++ A ++E
Sbjct: 123 FTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEE 182
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
M G E V++ + G V+ A VYK+ML+ P T +L+E L +
Sbjct: 183 MRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Query: 393 VSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYD 452
EAL+I M+++ P + + +LI + + G+ ++ M G I+
Sbjct: 243 CEEALDIFFK-MQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFV 301
Query: 453 AFIEGYKKLG 462
+E K G
Sbjct: 302 EALETLKAAG 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D ++ ++ F G ++ + V++ M+ G + + +Y L+ G + A +LW
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
EEMR G V +Y + + G++E+A E +KEM V N T+ L+
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLI 384
G + A+ ++ M + +P+ + +LI
Sbjct: 241 GKCEEALDIFFKMQEIGVQPDKAACNILI 269
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D ++ L+ G+++ +W EM GC P + SY M + +G++ EA +++
Sbjct: 156 DTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVY 215
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+EM + + Y ++ +G+ E+A + F +M+ GV+ + LI K
Sbjct: 216 KEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKF 275
Query: 356 GDVD--SAILVY 365
G+ + +LVY
Sbjct: 276 GETSFMTRVLVY 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 7/178 (3%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
F + ++ E +I + +++ +G+ T LI V+ ++ E
Sbjct: 123 FTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEE 182
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMA 280
+RD + P V S+ M + DG +E EV+ EM R PN ++Y +LM
Sbjct: 183 ---MRDNGCE----PTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 281 LFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGV 338
GK EA ++ +M+ G++ D A N +I K G+ M+ GV
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 36/287 (12%)
Query: 194 QIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM 253
I TCN +++ KC+ + +FRE + +V S+ ++ DG
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFRE------------MPKNVVSWTVMLTALCDDGRS 154
Query: 254 EMIEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNT 312
E E+++EM ER N+ S+N L+ G M +A+++++ M + DV ++N
Sbjct: 155 EDAVELFDEMPER-----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNA 205
Query: 313 IIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKD 372
+I G+ ++ +E+A+ F +M E N VT+ ++ GYC+ GDV A ++ +M +++
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 373 FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQME-- 430
+ +I G + EAL + +DV + + C +E
Sbjct: 262 IVSWTA----MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR 317
Query: 431 -EALKLQAKMAGKGFEP---DLKIYDAFIEGYKKLGNDQMAATLIME 473
+L A++ G+E D ++ + + Y G A +L+ E
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 278 LMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
L+ ++ G + A+ L E D+ + N II + K+G +E+AE F+ ++
Sbjct: 345 LVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNGDLERAETLFERVK--- 395
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL 397
+ V++ +I+GY + GDV A +++ + KD T ++I GL + + +EA
Sbjct: 396 SLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKD----GVTWTVMISGLVQNELFAEAA 451
Query: 398 EIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG--FEPDLKIYDAFI 455
++ + +R P +Y +L+ +++ + +A ++PDL + ++ +
Sbjct: 452 SLLSDMVR-CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLV 510
Query: 456 EGYKKLGNDQMAATLIMEM 474
Y K G + A + +M
Sbjct: 511 SMYAKCGAIEDAYEIFAKM 529
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
D+ N+++ + K G IE A E F +M V+ ++V++ +I G G D A+ ++
Sbjct: 502 DLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLF 557
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
K+ML +P + T ++ ++ LE+ + S P Y +I L
Sbjct: 558 KEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGR 617
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
G+++EA + + + F PD +Y A +
Sbjct: 618 AGKLKEAEEFISALP---FTPDHTVYGALL 644
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 269 VPNLYSY-------NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSG 321
+PN SY L+ EG + A L +++ +G V + +++ + K+G
Sbjct: 32 IPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTG 91
Query: 322 QIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIG 381
+++A F+ M E N VT ++ GY K ++ A ++++M + +
Sbjct: 92 YLDEARVLFEVMP----ERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKN-----VVSWT 142
Query: 382 MLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK--SYELLIKRLCEDGQMEEALKLQAKM 439
+++ LC+ R +A+E+ P R S+ L+ L +G ME+A ++ M
Sbjct: 143 VMLTALCDDGRSEDAVELFDEM-------PERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 440 AGKGFEPDLKIYDAFIEGYKKLGNDQM--AATLIMEMS 475
+ D+ ++A I+GY + ND M A L +MS
Sbjct: 196 PSR----DVVSWNAMIKGY--IENDGMEEAKLLFGDMS 227
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
S+N L+ + ++ +ME ++ E + V S+N L+ F + K+ EA + ++ M
Sbjct: 190 SWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
V+ DV ++NTII G+ +SG+I++A + F E + V T+ +++GY + V
Sbjct: 246 NVR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMV 297
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
+ A ++ M + R E S ML G + +R+ A E+ DV C + ++
Sbjct: 298 EEARELFDKMPE---RNEVSWNAMLA-GYVQGERMEMAKELF-----DVMPCRNVSTWNT 348
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+I + G++ EA L KM + D + A I GY + G+ A L ++M R
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 115/224 (51%), Gaps = 33/224 (14%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
S+N ++ G+ R+GE E+ ++++EM ER +L S+N+++ + + +A +L+E
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPER-----DLVSWNVMIKGYVRNRNLGKARELFEI 151
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
M + DV ++NT++ G+ ++G ++ A F M E N V++ L++ Y +
Sbjct: 152 MPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSK 203
Query: 358 VDSAILVYKDMLQKDFRPEASTIGM--LIEGLCEKKRVSEALEIIRN-AMRDVSFCPSRK 414
++ A +++K R + + L+ G +KK++ EA + + +RDV
Sbjct: 204 MEEACMLFKS------RENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV------ 251
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
S+ +I + G+++EA +L + + D+ + A + GY
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGY 291
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 119/269 (44%), Gaps = 46/269 (17%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
+V ++N ++ G+ + G++ + ++++M + V S+ ++A + G EA +L+
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV----SWAAMIAGYSQSGHSFEALRLF 397
Query: 296 EEMRVKGLRLDVTAYNTII---------------------GGFY--------------KS 320
+M +G RL+ +++++ + GG+ K
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 321 GQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTI 380
G IE+A + FKEM + V++ +I GY + G + A+ ++ M ++ +P+ +T+
Sbjct: 458 GSIEEANDLFKEM----AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 381 GMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMA 440
++ V + + +D P+ + Y ++ L G +E+A L M
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Query: 441 GKGFEPDLKIYDAFIEGYKKLGNDQMAAT 469
FEPD I+ + + GN ++A T
Sbjct: 574 ---FEPDAAIWGTLLGASRVHGNTELAET 599
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 113/240 (47%), Gaps = 17/240 (7%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
DV S+N ++ G+ + G+++ ++++E V +++++ +++ + + EA +L+
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
++M + + ++N ++ G+ + ++E A+E F M N T+ +I GY +
Sbjct: 305 DKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYAQC 356
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G + A ++ M ++D + +I G + EAL + R+ +R S
Sbjct: 357 GKISEAKNLFDKMPKRD----PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL-NRSS 411
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
+ + + +E +L ++ G+E + +A + Y K G+ + A L EM+
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 6/236 (2%)
Query: 224 LRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC 283
L G+SK + + S D + R G +E ++ E GC P + +IL+
Sbjct: 694 LAAGESKTPGKSVIRSMID---AYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALT 750
Query: 284 GEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
GK REAE + K + LD YNT+I ++G+++ A E ++ M GV +
Sbjct: 751 NRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQ 810
Query: 344 TFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNA 403
T+ +I+ Y + +D AI ++ + + + +I + ++SEAL + +
Sbjct: 811 TYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF-SE 869
Query: 404 MRDVSFCPSRKSYELLIKRLCEDGQM-EEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
M+ P SY +++K +C ++ E +L M G DL Y I+ Y
Sbjct: 870 MQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVY 924
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 36/238 (15%)
Query: 275 YNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME 334
YN L+ GK++ A +++E M G+ + YNT+I + + Q++KA E F
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 335 LGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVS 394
G+ + + ++I Y K G + A+ ++ +M +K +P + M+++ +C R+
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLH 895
Query: 395 EALEIIRNAMRDVSFCPSRKSYELLIK--------------------------------- 421
++ + AM C +Y LI+
Sbjct: 896 HEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSL 955
Query: 422 --RLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
L + G MEEA + KM+ G PD ++GY G+ + +M R+
Sbjct: 956 LSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRS 1013
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 44/244 (18%)
Query: 163 FDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIF 222
++ LIK+ LE K+ + EI + + G+ I+T N +IS + IF
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN-- 834
Query: 223 GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
R G L D + +++M + + G+M +++EM++ G P SYN +M
Sbjct: 835 ARRSG-----LYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYN-MMVKI 888
Query: 283 CGEGKM-REAEKLWEEMRVKGLRLDVTAYNTII--------------------------- 314
C ++ E ++L + M G D++ Y T+I
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 315 --------GGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYK 366
K+G +E+AE + +M G+ +S ++ GY GD + IL Y+
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYE 1008
Query: 367 DMLQ 370
M++
Sbjct: 1009 KMIR 1012
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 1/243 (0%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK 293
RP V + ++ + + G+++M EE + EM GC P+ + ++ + G+
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
++ ++ + + L + YN ++ K K + + EM GV N T+ +++ Y
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K G + A+ + +M F PE T +I + +A+ + + MR PS
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED-MRSQGIVPSN 363
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+ ++ + +AL L A M D I I Y KLG A ++ E
Sbjct: 364 YTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEE 423
Query: 474 MSR 476
R
Sbjct: 424 TER 426
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW--- 295
+ N ++ F R+G++ E + + + R G + L+A++ + K++EA++L+
Sbjct: 637 AVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAA 696
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
E + G + ++I + + G +E A F E G + +VT L+N
Sbjct: 697 GESKTPG----KSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNR 752
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
G A + + L+K+ + LI+ + E ++ A EI C S ++
Sbjct: 753 GKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPC-SIQT 811
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMS 475
Y +I Q+++A+++ + G D KIY I Y K G A +L EM
Sbjct: 812 YNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQ 871
Query: 476 R 476
+
Sbjct: 872 K 872
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 256 IEEVWNEMERFGCVPNLY---------SYNILMALFCGEGKMREAEKLWEEM-RVKGLRL 305
+ +++ + + GC N + S+ L++ + G++ A KL+++M VK
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---- 174
Query: 306 DVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
DV YN ++ GF KSG + A F EM +T+ +I+GYC + D+D+A ++
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEM----THKTVITWTTMIHGYCNIKDIDAARKLF 230
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
M +++ + IG G C+ K+ E + + + S P + ++ + +
Sbjct: 231 DAMPERNLVSWNTMIG----GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISD 286
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRTQ 478
G + + K + +K+ A ++ Y K G + A + EM Q
Sbjct: 287 TGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
>AT1G60770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22366959-22368648 REVERSE
Length = 491
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 141/314 (44%), Gaps = 32/314 (10%)
Query: 179 SIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIF-------------------- 218
++++ ++ RG++ + + + VAK + AG F
Sbjct: 74 ALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCY 133
Query: 219 -REIF-----GLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNL 272
+E+ GL + ++ + P S+N LM + + GE E + + E++ +P+
Sbjct: 134 CKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDS 193
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKG-LRLDVTAYNTIIGGFYKSGQIEKAEEFFK 331
Y+YN+ M + E++ EEM G + D T Y+ + + +G +KAE+ +
Sbjct: 194 YTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQ 253
Query: 332 EMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML--IEGLCE 389
E+E+ + + ++ LI Y ++G + +++ + + P+ S + L I+ L +
Sbjct: 254 ELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSL--RLAIPKTSNVAYLNMIQVLVK 311
Query: 390 KKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLK 449
+ A + + + S R +LI ++G +++A +L+ K +G + + K
Sbjct: 312 LNDLPGAETLFKEWQANCSTYDIR-IVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAK 370
Query: 450 IYDAFIEGYKKLGN 463
++ F++ Y K G+
Sbjct: 371 TWEIFMDYYVKSGD 384
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV-PNLYSYNILMALFCGEGKMREAEK 293
PD +++N M ++ +E V EM R G V P+ +Y+ + +++ G ++AEK
Sbjct: 191 PDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEK 250
Query: 294 LWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+E+ +K + D TAY +I + + G++ + ++ + L ++++V + ++I
Sbjct: 251 ALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLV 310
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
K+ D+ A ++K+ + + +LI ++ + +A E+ A R +
Sbjct: 311 KLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA- 369
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMA--GKG 443
K++E+ + + G M AL+ +K GKG
Sbjct: 370 KTWEIFMDYYVKSGDMARALECMSKAVSIGKG 401
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 114/255 (44%), Gaps = 41/255 (16%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
+V S+N ++ G+ + G ++ E+++EM ER N+ S+N ++ G++ EA L
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPER-----NIVSWNSMVKALVQRGRIDEAMNL 193
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
+E M R DV ++ ++ G K+G++++A F M E N +++ +I GY +
Sbjct: 194 FERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQ 245
Query: 355 VGDVDSAILVYKDMLQKDFR-------------------------PEASTIGM--LIEGL 387
+D A +++ M ++DF PE + I +I G
Sbjct: 246 NNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGY 305
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
E K EAL + +RD S P+ +Y ++ + + E ++ ++ + +
Sbjct: 306 VENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKN 365
Query: 448 LKIYDAFIEGYKKLG 462
+ A + Y K G
Sbjct: 366 EIVTSALLNMYSKSG 380
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 112/225 (49%), Gaps = 28/225 (12%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
DV ++ ++ G+ + G+M E++ +R N+ ++ +++ + ++ AE L+
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELF---DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
+EM + +V ++NT+I G+ +SG+I+KA E F EM E N V++ ++ +
Sbjct: 133 QEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQR 184
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK- 414
G +D A+ +++ M ++D + +++GL + +V EA + P R
Sbjct: 185 GRIDEAMNLFERMPRRD----VVSWTAMVDGLAKNGKVDEARRLF-------DCMPERNI 233
Query: 415 -SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
S+ +I ++ +++EA +L M E D ++ I G+
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITGF 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 118/253 (46%), Gaps = 49/253 (19%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVP--NLYSYNILMALFCGEGKMREA 291
R DV S+ ++ G ++G+++ + F C+P N+ S+N ++ + ++ EA
Sbjct: 199 RRDVVSWTAMVDGLAKNGKVDEARRL------FDCMPERNIISWNAMITGYAQNNRIDEA 252
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
++L++ M + D ++NT+I GF ++ ++ KA F M E N +++ +I G
Sbjct: 253 DQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITG 304
Query: 352 YCKVGDVDSAILVYKDMLQK-DFRPEAST-IGML-----IEGLCEKKRVSEAL------- 397
Y + + + A+ V+ ML+ +P T + +L + GL E +++ + +
Sbjct: 305 YVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK 364
Query: 398 -EIIRNAMRDV-----SFCPSRK-------------SYELLIKRLCEDGQMEEALKLQAK 438
EI+ +A+ ++ +RK S+ +I G +EA+++ +
Sbjct: 365 NEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 439 MAGKGFEPDLKIY 451
M GF+P Y
Sbjct: 425 MRKHGFKPSAVTY 437
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 32/293 (10%)
Query: 163 FDLLIKSCLELKKIDGSIEIV-RMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
+ +I +E K+ + ++ + +MLR + P + T ++S + G G I + I
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLI 357
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMG-----FYRDGEMEMIEEVWNEMERFGCVPNLYSYN 276
VH N+++ + + GE+ ++++ C +L S+N
Sbjct: 358 ------------SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN--GLVCQRDLISWN 403
Query: 277 ILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG 336
++A++ G +EA +++ +MR G + Y ++ +G +EK EFFK++
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 337 GVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQ----KDFRPEASTIGMLIEGLCEKKR 392
ES + EH Y + D+ KD+ D R S G ++
Sbjct: 464 --ESLPLREEH----YTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNE 517
Query: 393 VSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFE 445
VS A E+++ + S +Y L+ +G+ EEA +++ KM KG +
Sbjct: 518 VSIAKEVVKKVLETGS--DDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLK 568
>AT1G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:408779-410433 FORWARD
Length = 524
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 10/260 (3%)
Query: 147 EMLLKTYRQCDSA--PFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISC 204
E LL T R A P F++++ + L++ D +V ++ + I I + N+ +S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLS- 247
Query: 205 VAKCKGSCAGYGIFREI-FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEM 263
SC G ++ + S V + P+ +F+ + + + GE E E+ ++
Sbjct: 248 ------SCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKV 301
Query: 264 ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQI 323
E N Y+ L++L+ G +E ++W + + Y+ ++ + G I
Sbjct: 302 EARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDI 361
Query: 324 EKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGML 383
E AE+ ++E + L+N Y K +++A ++ M++ +P +ST +L
Sbjct: 362 EGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEIL 421
Query: 384 IEGLCEKKRVSEALEIIRNA 403
G K+ +SEAL +RNA
Sbjct: 422 AVGHTRKRCISEALTCLRNA 441
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 28/244 (11%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D + L+ + R E E + N M G + +N++M L+ + + + +
Sbjct: 168 DRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMV 227
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELG-GVESNSVTFEHLINGYCK 354
EM+ K +RLD+ +YN + G +EK E +++M+ + N TF + Y K
Sbjct: 228 FEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIK 287
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGM----------LIEGLCEKKRVSEALEIIRNAM 404
+G+ + A +D L+K EA G L L KK + + +
Sbjct: 288 MGETEKA----EDALRK---VEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYK--- 337
Query: 405 RDVSFCPS--RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
S PS Y L+ L G +E A K+ + D +I + + Y K
Sbjct: 338 ---SVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVK-- 392
Query: 463 NDQM 466
NDQ+
Sbjct: 393 NDQL 396
>AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16811051-16812106 FORWARD
Length = 351
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 5/181 (2%)
Query: 265 RFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIE 324
R G P+ +Y+ ++ + K+ EA ++ E MR K + +DVTAYN + G++E
Sbjct: 137 RLGLTPS--TYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELE 194
Query: 325 KAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLI 384
A E +++E G +S +++ L+ G C+ G V++A+ + + M + ST +I
Sbjct: 195 SASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVI 254
Query: 385 EGLCEKKRVSEALE-IIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKG 443
GL E + LE ++ A +D+ +S+ L +L + + EEA+ + +M +G
Sbjct: 255 TGLVEGGYYALGLEFVMAYAGKDLRL--DSESFGFLAGKLVKRKRYEEAMIVVKEMVMRG 312
Query: 444 F 444
Sbjct: 313 L 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 274 SYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
+Y+IL++ C G++ +A + +M L L + Y+ I+ + +IE+A + M
Sbjct: 109 AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESM 168
Query: 334 ELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRV 393
V + + + + +C G+++SA V + + + P++ + L+ G C +V
Sbjct: 169 RSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKV 228
Query: 394 SEALEIIRNAMRD-VSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYD 452
A+ I+R D V+ S ++ +I L E G L+ AGK D + +
Sbjct: 229 EAAMAILRRMEEDGVTVLYSTHAH--VITGLVEGGYYALGLEFVMAYAGKDLRLDSESF- 285
Query: 453 AFIEG 457
F+ G
Sbjct: 286 GFLAG 290
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 14/235 (5%)
Query: 145 FFEMLLKTYRQCD---SAPFVFDLLIKSCLELKKIDGSIEIV-RMLRSR-GISPQIRTCN 199
+ E L + Q D S +D+LI +L +ID ++ ++ M R G++P
Sbjct: 89 YLEDLRRVLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPST-YHP 147
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
+L S K K A +R + +R + DV ++N + DGE+E EV
Sbjct: 148 ILCSLTRKYKIEEA----WRVVESMRSKSVSM----DVTAYNYFLTSHCYDGELESASEV 199
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYK 319
++E G P+ SY+ L+ C GK+ A + M G+ + + + +I G +
Sbjct: 200 MRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVE 259
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFR 374
G EF + +S +F L K + A++V K+M+ + R
Sbjct: 260 GGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLR 314
>AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26838850-26841489 REVERSE
Length = 879
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 35/249 (14%)
Query: 261 NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMR-VKGLRLDVTAYNTIIGGFYK 319
+E++ G V +YNI + G + +++ ++G L+V YN+++ K
Sbjct: 310 DEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLK 369
Query: 320 SGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAST 379
++ + EM + GV N T + +CK G VD A+ +Y+ + F P A +
Sbjct: 370 ENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMS 429
Query: 380 IGMLIEGLCEKKRVSEALEIIRNAMRDVSFC----------------------------- 410
LI LC + V +A ++++ A+ F
Sbjct: 430 YNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAA 489
Query: 411 -----PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ 465
P R + +I LC+ G++E+AL + G + K++ + I G L
Sbjct: 490 ERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGD 549
Query: 466 MAATLIMEM 474
+AA LI+ M
Sbjct: 550 IAAKLIIRM 558
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 93/224 (41%), Gaps = 7/224 (3%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
+V +N ++ ++ ++ + ++ EM G PN + N + FC G + EA +L+
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
G +YN +I + +E+A + K G TF L N C
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEAL---EIIRNAMRDVSFCPS 412
G D A + ++D P+ +I LC+ +V +AL E+ + D SF
Sbjct: 476 GKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSF--- 532
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIE 456
K + LI + + A KL +M KG+ P +Y I+
Sbjct: 533 -KMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQ 575
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 3/208 (1%)
Query: 268 CVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAE 327
C +L + L+ + G+ A + + MR +GL LD Y+ ++ + + +
Sbjct: 178 CRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFD 237
Query: 328 EFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGL 387
F ++ + G +VT L+ +CK G +D A + +L D S +G+L++ L
Sbjct: 238 VIFDQISVRGFVC-AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDAL 296
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAG-KGFEP 446
C K++ EA +++ + ++ V ++Y + I+ L + G + K++ +G E
Sbjct: 297 CSKRKFQEATKLL-DEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCEL 355
Query: 447 DLKIYDAFIEGYKKLGNDQMAATLIMEM 474
++ Y++ + K N ++ EM
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEM 383
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 53/267 (19%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
P+V ++N +++ R+G+++ ++++ +M+ G +PNL S+ +M G EA
Sbjct: 474 PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 295 WEEMRVKGLRLD------------------------------------VTAYNTIIGGFY 318
+M+ GLR + V+ +++ +
Sbjct: 534 LRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYA 593
Query: 319 KSGQIEKAEEFF-----KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF 373
K G I KAE+ F E+ L SN+ +I+ Y G++ AI +Y+ +
Sbjct: 594 KCGDINKAEKVFGSKLYSELPL----SNA-----MISAYALYGNLKEAIALYRSLEGVGL 644
Query: 374 RPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEAL 433
+P+ TI ++ +++A+EI + + S P + Y L++ L G+ E+AL
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKAL 704
Query: 434 KLQAKMAGKGFEPDLKIYDAFIEGYKK 460
+L +M F+PD ++ + + K
Sbjct: 705 RLIEEMP---FKPDARMIQSLVASCNK 728
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 4/200 (2%)
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
+L +N L+A + G EA +L+ M+++G+ +V +N II ++GQ+++A++ F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
+M+ G+ N +++ ++NG + G + AIL + M + RP A +I + +
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
+ I +R++ L+ + G + +A K+ G +L +
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA----EKVFGSKLYSELPL 615
Query: 451 YDAFIEGYKKLGNDQMAATL 470
+A I Y GN + A L
Sbjct: 616 SNAMISAYALYGNLKEAIAL 635
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
N ++N LM + GK EA +L+ +MR +G+ +T + G +E+ ++
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
+ G+E +++ L+N YCKVG ++ A +V+ M +KD T ++I G ++
Sbjct: 298 AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD----VVTWNLIISGYVQQ 353
Query: 391 KRVSEAL 397
V +A+
Sbjct: 354 GLVEDAI 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 147/409 (35%), Gaps = 91/409 (22%)
Query: 138 CNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRT 197
C A + F EML + FV + K+C LK R + + +
Sbjct: 154 CEGALMGFVEML---ENEIFPDNFVVPNVCKACGALKWS----RFGRGVHGYVVKSGLED 206
Query: 198 CNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLR-PDVHS--FNDLMMGFYRDGEME 254
C + S +A G C G+ D SKV PD ++ +N LM+G+ ++G+ E
Sbjct: 207 CVFVASSLADMYGKC----------GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNE 256
Query: 255 MIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLD-------- 306
++++M + G P + + ++ G + E ++ V G+ LD
Sbjct: 257 EAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLL 316
Query: 307 -----------------------VTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSV 343
V +N II G+ + G +E A + M L ++ + V
Sbjct: 317 NFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCV 376
Query: 344 TFEHLING-----------------------------------YCKVGDVDSAILVYKDM 368
T L++ Y K G + A V+
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 369 LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQ 428
++KD L+ E EAL + M+ P+ ++ L+I L +GQ
Sbjct: 437 VEKDL----ILWNTLLAAYAESGLSGEALRLFY-GMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 429 MEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
++EA + +M G P+L + + G + G + A + +M +
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE
Length = 838
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 61/104 (58%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
+V + P V + L+ G+ GE++ +E++ EM G +PN+++YN ++ C G+ R
Sbjct: 717 EVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 776
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEM 333
EA L +EM +G + Y+T++G K+G++ +A + KEM
Sbjct: 777 EACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 261 NEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKS 320
N M+ G P++ Y L+ + G++ +A++++ EM VKG +V YN++I G +
Sbjct: 713 NHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 772
Query: 321 GQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQK 371
G+ +A KEME G N V + L+ K G + A V K+M++K
Sbjct: 773 GEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
M+ G+ V Y T+I G+ SG+++KA+E F+EM + G N T+ +I G C
Sbjct: 713 NHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 772
Query: 356 GDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMR 405
G+ A + K+M + P L+ L + ++SEA ++I+ ++
Sbjct: 773 GEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 121/278 (43%), Gaps = 18/278 (6%)
Query: 190 GISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYR 249
G+ ++ N I+ KC AG +F E+ V+ + ++N ++ G+ +
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEM--------PVK---GLITWNAVISGYSQ 234
Query: 250 DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTA 309
+G + E++ +M+ G P+ ++ +++ G + ++ + + G +V
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFV 294
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
N I + + G + KA F M + + V++ +I Y G + ++++ DM+
Sbjct: 295 SNASISMYARCGNLAKARAVFDIMPVKSL----VSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQM 429
++ RP+ + M++ + LE+ R R+ P + Y L+ L G++
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
+EA++ M EPD ++ A + K N MA
Sbjct: 411 DEAMEFIESMP---VEPDGAVWGALLGACKIHKNVDMA 445
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 34/228 (14%)
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKA 326
GC + L++++C G + +A K++EE + +L V YN +I G+ + ++ A
Sbjct: 83 GCETEPFVLTALISMYCKCGLVADARKVFEE-NPQSSQLSV-CYNALISGYTANSKVTDA 140
Query: 327 EEFFKEMELGGVESNSVTFEHLI---------------NGYCKVGDVDSAILV---YKDM 368
F+ M+ GV +SVT L+ +G C G +DS + V + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 369 LQKDFRPEAS-------------TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
K EA T +I G + + LE+ M+ CP +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQ-MKSSGVCPDPFT 259
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGN 463
++ G + ++ + GF P++ + +A I Y + GN
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
>AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G27300.1); Has 11283 Blast hits to 3897
proteins in 129 species: Archae - 1; Bacteria - 2;
Metazoa - 118; Fungi - 74; Plants - 10832; Viruses - 0;
Other Eukaryotes - 256 (source: NCBI BLink). |
chr2:11849789-11851351 REVERSE
Length = 442
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 35/245 (14%)
Query: 240 FNDLMMGFYRDGEMEMIEEVWNEM---ERFGCVPNLYSYNILMALFCGEGKMREAEKLWE 296
+N ++ F + G++ ++ M + C P + +Y+IL G G
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGN--------- 260
Query: 297 EMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVG 356
N+ I Y +E F++M G+E + L+ GY
Sbjct: 261 --------------NSYINHVY----METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 357 DVDSAILVYKDM-LQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKS 415
V+ A+ ++ M + D P + T LI GLC + R A E++ + M+ F P+ KS
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELL-SEMKGKGFVPNGKS 361
Query: 416 YELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI-EGYKKLGNDQMAATLIMEM 474
Y L+ G++++A+K +M G D Y + E +K D+ AT ++EM
Sbjct: 362 YNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE--ATRLLEM 419
Query: 475 SRTQK 479
R ++
Sbjct: 420 LREKQ 424
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 10/208 (4%)
Query: 175 KIDGSIEIVR-MLRSRGIS--PQIRTCNLLI-SCVAKCKGSCAGYGIFREIFGLRDGDSK 230
K+ ++ I R M+ S+ + P IRT ++L + + + S + + L
Sbjct: 222 KLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVD 281
Query: 231 VRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMER-FGCVPNLYSYNILMALFCGEGKMR 289
+ PDV + N L+ G+ + ++++M + C PN ++Y+ L+ C +G+
Sbjct: 282 SGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTI 341
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLI 349
A +L EM+ KG + +YN+++ F SG+I+ A + EM G + +++ L+
Sbjct: 342 NARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLV 401
Query: 350 NGYCKVGDVDSA-----ILVYKDMLQKD 372
+ C+ G D A +L K ++ +D
Sbjct: 402 DESCRKGKYDEATRLLEMLREKQLVDRD 429
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 100/237 (42%), Gaps = 15/237 (6%)
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGE------ 252
N +I K IFR + ++ + RP + +++ L G
Sbjct: 211 NSIIFYFTKAGKLIRAVNIFRHMVTSKN----LECRPTIRTYHILFKALLGRGNNSYINH 266
Query: 253 --MEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRV-KGLRLDVTA 309
ME + ++ +M G P++++ N L+ + + +A +++ +M V +
Sbjct: 267 VYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFT 326
Query: 310 YNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML 369
Y+ +I G G+ A E EM+ G N ++ L+N + G++D A+ +M+
Sbjct: 327 YDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMI 386
Query: 370 QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCED 426
+ + + L++ C K + EA ++ +R+ R SY+ L+ L +D
Sbjct: 387 ENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLV-DRDSYDKLVNVLHKD 441
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 36/248 (14%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
S++ ++MG+ + G+MEM ++++M N+ ++ I++A + +G ++EA++L ++M
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPL--PAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
GL+ D A +I+ +SG + ++ + SN+ L++ Y K G++
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 359 DSAILVYKDMLQKDF-------------------------------RPEASTIGMLIEGL 387
A V+ D+ +KD RP+ T ++
Sbjct: 367 KKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSC 426
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+ E ++ + + P + Y L+ L G+++EA+K+ M EP+
Sbjct: 427 NHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP---MEPN 483
Query: 448 LKIYDAFI 455
+ I+ A +
Sbjct: 484 VVIWGALL 491
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 25/282 (8%)
Query: 190 GISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYR 249
G I N IS +K + +C+ R +F + + V S+ ++ G+
Sbjct: 286 GTDQDIEAINTFISMYSKSEDTCSA----RLLFDIMTSRTCV-------SWTVMISGYAE 334
Query: 250 DGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEK-LWEEMR--VKGLRLD 306
G+M+ +++ M + G P+L + L++L G GK E W + R + G + D
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVT---LLSLISGCGKFGSLETGKWIDARADIYGCKRD 391
Query: 307 -VTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVY 365
V N +I + K G I +A + F E VT+ +I GY G A+ ++
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTP----EKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 366 KDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCE 425
M+ D++P T +++ + + E + + P Y ++ L
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 426 DGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
G++EEAL+L M+ K PD I+ A + K N ++A
Sbjct: 508 KGKLEEALELIRNMSAK---PDAGIWGALLNACKIHRNVKIA 546
>AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) |
chr1:6760032-6762581 FORWARD
Length = 725
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 121/269 (44%), Gaps = 14/269 (5%)
Query: 221 IFGLRDGDSKVRLRP-----DVHSFNDLMMGF-------YRDGEMEMIEEVWNEMERFGC 268
I LR+G++ L+ D SFN + + ++ +E +E + +M + G
Sbjct: 356 INQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGI 415
Query: 269 VPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEE 328
P++ + L+ ++ G A + +E ++ GLR D Y +I G+ +G+ + E
Sbjct: 416 FPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGER 475
Query: 329 FFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEA-STIGMLIEGL 387
KEM+ ++++ + L+ Y ++GD + A + M P + + +E
Sbjct: 476 LMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAY 535
Query: 388 CEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+ +V +A + MR + P K L++ + +++AL+L ++ G E
Sbjct: 536 GKAGQVDKAKSNF-DEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIG 594
Query: 448 LKIYDAFIEGYKKLGNDQMAATLIMEMSR 476
+ Y ++ LG + A L++++S+
Sbjct: 595 VITYTVLVDWMANLGLIEEAEQLLVKISQ 623
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 107/249 (42%), Gaps = 8/249 (3%)
Query: 235 PDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
PD+ + L+ + + G E E + ++ +G P+ Y ++ + GK + E+L
Sbjct: 417 PDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERL 476
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH---LING 351
+EM+ K L+ Y ++ + + G A M+ ++FE +
Sbjct: 477 MKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYAS--DGPLSFEAYSLFVEA 534
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
Y K G VD A + +M + +P+ I L+ + + +AL ++ +D
Sbjct: 535 YGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD-GIEI 593
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQ--MAAT 469
+Y +L+ + G +EEA +L K++ G P ++ + Y + N++ + A
Sbjct: 594 GVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVSLCCMYSGVRNEKKTLQAL 653
Query: 470 LIMEMSRTQ 478
++E R Q
Sbjct: 654 GVLEAKRDQ 662
>AT1G07590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2336649-2338481 REVERSE
Length = 534
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 18/251 (7%)
Query: 119 KVQALSIIKSALVSRCLFDCNNAP--VKFFEMLLKTYRQCDSAPFV--FDLLIKSCLELK 174
K++ L S LV L N+AP K L + + P V + +L+K
Sbjct: 191 KMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEH 250
Query: 175 KIDGSIEIVRMLRSRGISP-QIRTCNLLIS-CVAKCKGSCAGYGIFREIFGLRDGDSKVR 232
IDG ++ ++ G+ P ++ C L ++ VA+ Y EI GD
Sbjct: 251 NIDGVLKAFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYT--EEIEKSITGD---- 304
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
+ + + LM+ + R G+ + + WN + F V + SY + F G + AE
Sbjct: 305 ---NWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRS-KSYLLATEAFARVGNLDRAE 360
Query: 293 KLWEEMR-VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+LW EM+ VKGL+ + +N+++ + K G IEKA F+EM G + NS+T+ HL G
Sbjct: 361 ELWLEMKNVKGLK-ETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALG 419
Query: 352 YCKVGDVDSAI 362
K + A+
Sbjct: 420 CAKAKLMKEAL 430
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
DG K + P+ S+ L M + E E+E+ N + +ILM L+
Sbjct: 260 DGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYGRL 319
Query: 286 GKMREAEKLWEEMRVKGLR-LDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
GK +E + W +R G + +Y F + G +++AEE + EM+ +
Sbjct: 320 GKEKELARTWNVIR--GFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ 377
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEII---- 400
F L++ YCK G ++ AI V+++M F+P + T L G + K + EAL+ I
Sbjct: 378 FNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGL 437
Query: 401 --RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGY 458
+ + S P ++ +I+ E G +E + KL ++ + +Y+A + Y
Sbjct: 438 NLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAY 497
Query: 459 KK 460
K
Sbjct: 498 VK 499
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 7/241 (2%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D+ +++ ++ G+ + GE E +++ E+ + G PN ++++ ++ + K +
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Query: 296 EEMRVKGLRLDVT--AYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+K RLD + + ++ + K G IE AEE FK E + V++ +I+GY
Sbjct: 518 HGFAIKS-RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR----EKDLVSWNSMISGYA 572
Query: 354 KVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSR 413
+ G A+ V+K+M ++ + + T + V E + +RD P++
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 414 KSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
+ ++ GQ+E+A+K+ M + A +KK ++AA I+
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 692
Query: 474 M 474
M
Sbjct: 693 M 693
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 29/326 (8%)
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGY----G 216
F ++ + L + G + L G + LI +KC G C G
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKC-GGCDGMYDSEK 299
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEM-EMIEEVWNEMERFGCVPNLYSY 275
+F+EI L PD+ +N ++ G+ + E+ E + + +M+R G P+ S+
Sbjct: 300 VFQEI-----------LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF 348
Query: 276 NILMAL---FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
+ + + ++ L + + R+ V N +I +YKSG ++ A F
Sbjct: 349 VCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN--NALISLYYKSGNLQDARWVFDR 406
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
M E N+V+F +I GY + G A+L+Y+ ML P T ++ +
Sbjct: 407 MP----ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462
Query: 393 VSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYD 452
V E E P + Y +I L G++EEA + M ++P +
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP---YKPGSVAWA 519
Query: 453 AFIEGYKKLGNDQMAATLIMEMSRTQ 478
A + +K N +A E+ Q
Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQ 545
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 270 PNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEF 329
PN++SYN+++ + + K+ A +L++E+ + D +YNT+I G+ + + A
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDEIP----QPDTVSYNTLISGYADARETFAAMVL 127
Query: 330 FKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCE 389
FK M G E + T LI C D+ + + + F +S + +
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFS--VSGGFDSYSSVNNAFVTYYSK 185
Query: 390 KKRVSEALEII--RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+ EA+ + + +RD S+ +I + + +AL L +M KGF+ D
Sbjct: 186 GGLLREAVSVFYGMDELRD------EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKID 239
Query: 448 L 448
+
Sbjct: 240 M 240
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 108/242 (44%), Gaps = 12/242 (4%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIE-EVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKL 294
D+ +N ++ GF R GE +++ M+R G PN+ ++ ++ +++
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 295 WEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCK 354
++ G+ + ++++ + K G I A F +M+ E N ++ +I+GY K
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ----EKNVFSWTSMIDGYGK 351
Query: 355 VGDVDSAILVYKDMLQKDFRPEASTIGML--IEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
G+ + A+ ++ M K+FR E + + L + V + EI + RD S P
Sbjct: 352 NGNPEEALELFTRM--KEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 413 RKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIM 472
+ Y ++ + G + +A + M + PD I+ A + GN ++A+
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPER---PDSDIWAALLSSCNLHGNVELASIAAS 466
Query: 473 EM 474
E+
Sbjct: 467 EL 468
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 271 NLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFF 330
N ++N ++ + G++ A K++++M + D+ ++ +I GF K G E+A +F
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWF 194
Query: 331 KEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEK 390
+EM++ GV+ + V +N +G + + V++ +L +DF+ LI+ C
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 391 KRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKI 450
V A ++ N + S+ +I +G E+L KM KGF+PD
Sbjct: 255 GCVEFARQVFYNMEKRTVV-----SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 451 YDAFIEGYKKLG 462
+ + +G
Sbjct: 310 FTGALTACSHVG 321
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 114/271 (42%), Gaps = 48/271 (17%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEM-ERFGCVPNLYSYNILMALFCGEGKMREAEKLWEE 297
++N ++ G+ R G+++ +++++M ER +L S+ ++ F +G EA + E
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPER-----DLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 298 MRVKGLRLDVTAY-----------------------------------NTIIGGFYKSGQ 322
M++ G++ D A N++I + + G
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGM 382
+E A + F ME + V++ +I G+ G+ +++ ++ M +K F+P+A T
Sbjct: 257 VEFARQVFYNME----KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 383 LIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGK 442
+ V E L + D P + Y L+ G++E+ALKL M K
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Query: 443 GFEPDLKIYDAFIEGYKKLGNDQMAATLIME 473
P+ + + + GN+ + A +M+
Sbjct: 373 ---PNEVVIGSLLAACSNHGNNIVLAERLMK 400
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 116/241 (48%), Gaps = 12/241 (4%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG-KMREAE 292
+ D+ S+N +++GF R G+ME + V+++M + +L S+N L+ + +G R
Sbjct: 297 KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK----RDLVSWNSLLFGYSKKGCDQRTVR 352
Query: 293 KLWEEMR-VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+L+ EM V+ ++ D ++I G +G++ + ++ ++ LI+
Sbjct: 353 ELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDM 412
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
YCK G ++ A +V+K +KD S +I GL +AL++ M++ P
Sbjct: 413 YCKCGIIERAFMVFKTATEKDVALWTS----MITGLAFHGNGQQALQLF-GRMQEEGVTP 467
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGK-GFEPDLKIYDAFIEGYKKLGNDQMAATL 470
+ + ++ G +EE L + M K GF+P+ + Y + ++ + G + A +
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Query: 471 I 471
+
Sbjct: 528 V 528
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 232 RLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREA 291
+++PD + L+ G +GE+ V + R + + + L+ ++C G + A
Sbjct: 363 KVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERA 422
Query: 292 EKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
+++ K DV + ++I G G ++A + F M+ GV N+VT ++
Sbjct: 423 FMVFKTATEK----DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTA 478
Query: 352 YCKVGDVDSAILVYKDMLQK-DFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC 410
G V+ + V+ M K F PE G L++ LC RV EA +I++ M
Sbjct: 479 CSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKM------ 532
Query: 411 PSRKSYELL--IKRLCEDGQ--------MEEALKLQAKMAG 441
P R S + I C G+ + E LKL+ + G
Sbjct: 533 PMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEG 573
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 7/232 (3%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEM 298
S+N ++ G+ ++G E ++ EM++ PN + +++ G + + + + +
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 299 RVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDV 358
R + +IG + K G I +A F M + N VT+ +I+GY G
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM----TKKNEVTWNTMISGYGLHGQG 502
Query: 359 DSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYEL 418
A+ ++ +ML P T ++ V E EI + + F PS K Y
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 419 LIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
++ L G ++ AL+ M+ EP +++ + + + +A T+
Sbjct: 563 MVDILGRAGHLQRALQFIEAMS---IEPGSSVWETLLGACRIHKDTNLARTV 611
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N +IS K + +FR++ +S RL D + D++ E+ + +
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLIN----ESCTRL--DTTTLLDILPAVAELQELRLGMQ 242
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
+ + + GC + Y ++L+ GK++ L+ E R + D+ AYN +I G+
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR----KPDIVAYNAMIHGYT 298
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHL------------INGYC------KVGDVDS 360
+G+ E + FKE+ L G S T L I+GYC V +
Sbjct: 299 SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVST 358
Query: 361 AILVYKDMLQK--------DFRPEAS--TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC 410
A+ L + D PE S + +I G + +A+ + R M+ F
Sbjct: 359 ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE-MQKSEFS 417
Query: 411 PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATL 470
P+ + ++ + G + + + FE + + A I Y K G+ A L
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 471 IMEMSR 476
M++
Sbjct: 478 FDLMTK 483
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 109/243 (44%), Gaps = 11/243 (4%)
Query: 234 RPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV-PNLYSYNILMALFCGEGKMREAE 292
RPDV FN LM GF + V+ + + + PN +Y ++ G R
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+ + V G ++ + I+ ++K ++E A + F M E +++ + +I+GY
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP----EKDTILWNTMISGY 195
Query: 353 CKVGDVDSAILVYKDMLQKD-FRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
K +I V++D++ + R + +T+ ++ + E + + ++I A + +
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY-- 253
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLI 471
S++ ++ +K+ + + + +PD+ Y+A I GY G +++ +L
Sbjct: 254 ---SHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 472 MEM 474
E+
Sbjct: 311 KEL 313
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 146/371 (39%), Gaps = 52/371 (14%)
Query: 149 LLKTYRQC---DSAPFVFD------LLIKSCL-----ELKKIDGSIEIVRMLRSRGISPQ 194
L+ Y +C D A FVFD ++ +C+ E ++ ++E+ R+++ G+ P
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 195 IRTCNLLISCVAKC----KGSC-AGYGIFREI-----------------------FGLRD 226
T L+S G C G+ + +++ F +
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 227 GDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEG 286
G SK P ++ ++ G ++ + ++ M R PN+ + N L+ +
Sbjct: 379 GASKYHTGP----WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 287 KMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFE 346
+R+A + + G + A ++ + K G +E A + F ++ + V +
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 347 HLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRD 406
LI+GY GD +A+ V+ +M++ P T + V E L + R +
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH 554
Query: 407 VSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG---YKKLGN 463
Y ++ L G+++EA L + FEP ++ A + ++ +
Sbjct: 555 YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIP---FEPTSTVWGALLAACVTHENVQL 611
Query: 464 DQMAATLIMEM 474
+MAA + E+
Sbjct: 612 GEMAANKLFEL 622
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 236 DVHSFNDLMMGFYRDGEME----MIEEVWNEMERFGCVPNLYSYNILMALFCGEGK---- 287
DV S+N ++ G+YR+G M M + + NE V ++ + M CG K
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNE-----SVDLDHATIVSMLPVCGHLKDLEM 236
Query: 288 MREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEH 347
R KL EE R+ G +++V N ++ + K G++++A F ME + +T+
Sbjct: 237 GRNVHKLVEEKRL-GDKIEVK--NALVNMYLKCGRMDEARFVFDRME----RRDVITWTC 289
Query: 348 LINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEA 396
+INGY + GDV++A+ + + M + RP A TI L+ + +V++
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 142/339 (41%), Gaps = 20/339 (5%)
Query: 140 NAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCN 199
N + F+ ++ D A V ++ C LK ++ + +++ + + +I N
Sbjct: 200 NDALMMFDWMVNESVDLDHATIVS--MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 200 LLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEV 259
L++ KC +F + R DV ++ ++ G+ DG++E E+
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRM-----------ERRDVITWTCMINGYTEDGDVENALEL 306
Query: 260 WNEMERFGCVPNLYSYNILMALFCGEG-KMREAEKLWEEMRVKGLRLDVTAYNTIIGGFY 318
M+ G PN + L+++ CG+ K+ + + L + + D+ ++I +
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSV-CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 319 KSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEAS 378
K +++ F G + ++ + +I G + V A+ ++K M ++D P +
Sbjct: 366 KCKRVDLCFRVFS----GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIA 421
Query: 379 TIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAK 438
T+ L+ + +A+ I + F S + L+ + G +E A K+
Sbjct: 422 TLNSLLPAYAALADLRQAMNI-HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 439 MAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEMSRT 477
+ K D+ ++ A I GY G+ A + MEM R+
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
Y N L+A++ GK+ A +++ M+ + DV ++NT+I G+Y++G + A F
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNR----DVISWNTMISGYYRNGYMNDALMMFDW 208
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKR 392
M V+ + T ++ + D++ V+K + +K + L+ + R
Sbjct: 209 MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 393 VSEALEII-RNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPD 447
+ EA + R RDV ++ +I EDG +E AL+L M +G P+
Sbjct: 269 MDEARFVFDRMERRDVI------TWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 137/356 (38%), Gaps = 59/356 (16%)
Query: 147 EMLLKTYRQCDSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVA 206
++L K++ D F F + KSC L ++ L G + T N LI
Sbjct: 98 QLLRKSFELPDR--FTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYM 155
Query: 207 KCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF 266
K + +F E++ DV S+N L+ G+ R G+M+ + +++ M
Sbjct: 156 KFDDLVDAHKVFDEMY-----------ERDVISWNSLLSGYARLGQMKKAKGLFHLM--- 201
Query: 267 GCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAY---------------- 310
+ S+ +++ + G G EA + EM++ G+ D +
Sbjct: 202 -LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
Query: 311 -------------------NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLING 351
N +I + K G I +A + F +ME V +++ +I+G
Sbjct: 261 KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV----ISWSTMISG 316
Query: 352 YCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
Y G+ AI + +M + +P T L+ E L +D P
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
+ Y LI L G++E A+++ M K PD KI+ + + + GN +A
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMK---PDSKIWGSLLSSCRTPGNLDVA 429
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 233 LRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAE 292
+ PD S ++ + G +E+ + + ER G + N L+ ++ G + +A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+L+ +M K DV +++T+I G+ G A E F EM+ V+ N +TF L++
Sbjct: 297 QLFGQMEGK----DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC 352
Query: 353 CKVGDVDSAILVYKDMLQKDFR--PEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFC 410
VG L Y DM+++D++ P+ G LI+ L ++ A+EI + +
Sbjct: 353 SHVGMWQEG-LRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT----MPMK 407
Query: 411 PSRKSYELLIKRLCEDGQMEEAL 433
P K + L+ G ++ AL
Sbjct: 408 PDSKIWGSLLSSCRTPGNLDVAL 430
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 166 LIKSCLELKKIDGSIEIVRMLR----SRGISPQIRTCNLLISCVAKCKGSCAGYGIFR-- 219
++ SC +L GS+E+ + + RG Q CN LI +KC G+
Sbjct: 247 VLPSCAQL----GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKC-------GVISQA 295
Query: 220 -EIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNIL 278
++FG +G DV S++ ++ G+ G E +NEM+R PN ++ L
Sbjct: 296 IQLFGQMEG-------KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL 348
Query: 279 MALFCGEGKMREAEKLWEEMRVK-GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGG 337
++ G +E + ++ MR + + Y +I ++G++E+A E K M +
Sbjct: 349 LSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM-- 406
Query: 338 VESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEG----LCEKKRV 393
+ +S + L++ G++D A++ +++ PE +L+ L + + V
Sbjct: 407 -KPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPEDMGNYVLLANIYADLGKWEDV 463
Query: 394 SEALEIIRN 402
S ++IRN
Sbjct: 464 SRLRKMIRN 472
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 127/305 (41%), Gaps = 32/305 (10%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
I +C K++D ++ + ++ P + N L C ++ + LR
Sbjct: 66 FITACTSFKRLDLAVSTMTQMQE----PNVFVYNALFKGFVTCSHPIRSLELYVRM--LR 119
Query: 226 DGDSKVRLRPDVHSFNDLMMG---FYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALF 282
D S P ++++ L+ R GE + +W +FG ++ L+ +
Sbjct: 120 DSVS-----PSSYTYSSLVKASSFASRFGE-SLQAHIW----KFGFGFHVKIQTTLIDFY 169
Query: 283 CGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNS 342
G++REA K+++EM + D A+ T++ + + ++ A +M E N
Sbjct: 170 SATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMS----EKNE 221
Query: 343 VTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRN 402
T LINGY +G+++ A ++ M KD + +I+G + KR EA+ +
Sbjct: 222 ATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTT----MIKGYSQNKRYREAIAVFYK 277
Query: 403 AMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
M + P + +I G +E ++ GF D+ I A ++ Y K G
Sbjct: 278 MMEE-GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 336
Query: 463 NDQMA 467
+ + A
Sbjct: 337 SLERA 341
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 39/311 (12%)
Query: 161 FVFDLLIKSCLELKKIDGSIEI-VRMLRSRGISPQIRTCNLLI--SCVAKCKGSCAGYGI 217
FV++ L K + S+E+ VRMLR +SP T + L+ S A G I
Sbjct: 92 FVYNALFKGFVTCSHPIRSLELYVRMLRD-SVSPSSYTYSSLVKASSFASRFGESLQAHI 150
Query: 218 FREIFGLR-----------DGDSKVRL----------RPDVHSFNDLMMGFYRDGEMEMI 256
++ FG ++R R D+ ++ ++ + R +M+
Sbjct: 151 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDI-AWTTMVSAYRRVLDMDSA 209
Query: 257 EEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGG 316
+ N+M N + N L+ + G G + +AE L+ +M VK D+ ++ T+I G
Sbjct: 210 NSLANQMSE----KNEATSNCLINGYMGLGNLEQAESLFNQMPVK----DIISWTTMIKG 261
Query: 317 FYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPE 376
+ ++ + +A F +M G+ + VT +I+ +G ++ V+ LQ F +
Sbjct: 262 YSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLD 321
Query: 377 ASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQ 436
L++ + + AL + N + FC + +I+ L G +EALK+
Sbjct: 322 VYIGSALVDMYSKCGSLERALLVFFNLPKKNLFC-----WNSIIEGLAAHGFAQEALKMF 376
Query: 437 AKMAGKGFEPD 447
AKM + +P+
Sbjct: 377 AKMEMESVKPN 387
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 53/298 (17%)
Query: 199 NLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEE 258
N L+S +KC S + R++F L D S+ +M G+ ++G ++ EE
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVF-------DEILEKDERSWTTMMTGYVKNGYFDLGEE 240
Query: 259 VWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLD------------ 306
+ M+ L +YN +++ + G +EA ++ M G+ LD
Sbjct: 241 LLEGMDD---NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACA 297
Query: 307 ----------VTAY------------NTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVT 344
V AY N+++ +YK G+ ++A F++M + V+
Sbjct: 298 TAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP----AKDLVS 353
Query: 345 FEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAM 404
+ L++GY G + A L++K+M +K+ + ++I GL E E L++ + M
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMIMISGLAENGFGEEGLKLF-SCM 408
Query: 405 RDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLG 462
+ F P ++ IK G + A++ GF+ L +A I Y K G
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 230 KVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMR 289
K+ + + N L+ + + G +E +V+ M C+ ++ S+N L+A G
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP---CLDSV-SWNALIAALGQHGHGA 500
Query: 290 EAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEME-LGGVESNSVTFEHL 348
EA ++EEM KG+R D T++ +G +++ ++F ME + + + + L
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 349 INGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEI-IRNAMRDV 407
I+ C+ G A V + + F+P A L+ G RV +E+ I A +
Sbjct: 561 IDLLCRSGKFSDAESVIESL---PFKPTAEIWEALLSGC----RVHGNMELGIIAADKLF 613
Query: 408 SFCPSRK-SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDL 448
P +Y LL GQ EE +++ M +G + ++
Sbjct: 614 GLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEV 655
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 137/330 (41%), Gaps = 45/330 (13%)
Query: 166 LIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLR 225
LI SC + +I + ++ L RG+S N +I ++ K E+ L
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVS----VYNSMIVVYSRGKNP-------DEVLRLY 104
Query: 226 DGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGE 285
D +++PD +F + +E E VW + FG +++ + ++ L+
Sbjct: 105 DQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKC 164
Query: 286 GKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTF 345
GKM EAE L+ +M + DV + T++ GF ++G+ KA EF++EM+ G + V
Sbjct: 165 GKMDEAEVLFGKMA----KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVM 220
Query: 346 EHLINGYCKVGDVDSAILV----YKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
L+ +GD V Y+ L + E S + M + +E+
Sbjct: 221 LGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAK--------VGFIEVAS 272
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKL 461
+ F + S+ LI ++G +A + +M GF+PDL + ++
Sbjct: 273 RVFSRMMF-KTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 462 GN-----------------DQMAATLIMEM 474
G+ D++ AT +M+M
Sbjct: 332 GSLKTGRLVHCYILKRHVLDRVTATALMDM 361
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 13/241 (5%)
Query: 239 SFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYS-YNILMALFCGEGKMREAEKLWEE 297
S+ L+ GF ++G E EM+ G P+L + +L+A C + + +L
Sbjct: 285 SWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVA--CSQVGSLKTGRLVHC 342
Query: 298 MRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGD 357
+K LD ++ + K G + + E F+ + + V + +I+ Y G+
Sbjct: 343 YILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVG----RKDLVCWNTMISCYGIHGN 398
Query: 358 VDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRKSYE 417
+ ++ M + + P+ +T L+ L V + + PS K Y
Sbjct: 399 GQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYV 458
Query: 418 LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEG---YKKLGNDQMAATLIMEM 474
LI L G++EEAL + + + + L I+ A + G ++ L +AA I+++
Sbjct: 459 CLIDLLARAGRVEEALDM---INSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQL 515
Query: 475 S 475
+
Sbjct: 516 N 516
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 19/274 (6%)
Query: 162 VFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREI 221
F ++ +C L+++ EI L + GI + + L+ KC G RE
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC-------GSVREA 319
Query: 222 FGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMAL 281
+ +G SK + S++ L+ G+ ++GE E E++ EME +LY + ++
Sbjct: 320 RQVFNGMSK----KNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKA 371
Query: 282 FCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESN 341
G +R +++ + +G +V + +I + KSG I+ A + +M + N
Sbjct: 372 CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI----RN 427
Query: 342 SVTFEHLINGYCKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIR 401
+T+ +++ + G + A+ + DM++K +P+ + ++ V E
Sbjct: 428 MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFV 487
Query: 402 NAMRDVSFCPSRKSYELLIKRLCEDGQMEEALKL 435
+ P + Y +I L G EEA L
Sbjct: 488 LMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENL 521
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 141/337 (41%), Gaps = 45/337 (13%)
Query: 157 DSAPFVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYG 216
D+ F +K+C EL G + + R I+ + + S +A YG
Sbjct: 160 DANEFTLSSAVKACSEL----GEVRLGRCFHGVVITHGFEWNHFISSTLAYL------YG 209
Query: 217 IFREIFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERF-GCVPNLYSY 275
+ RE R ++ PDV + ++ F ++ E ++ M R G VP+ ++
Sbjct: 210 VNREPVDARRVFDEMP-EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTF 268
Query: 276 NILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMEL 335
++ ++++ +++ ++ G+ +V ++++ + K G + +A + F M
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS- 327
Query: 336 GGVESNSVTFEHLINGYCKVGDVDSAILVYKDMLQKDF----------------RPEAST 379
+ NSV++ L+ GYC+ G+ + AI ++++M +KD R
Sbjct: 328 ---KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEI 384
Query: 380 IGMLIEGLCEKKRVSEALEI--------IRNAMRDVSFCPSRK--SYELLIKRLCEDGQM 429
G + C + E+ I I +A R S R ++ ++ L ++G+
Sbjct: 385 HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRG 444
Query: 430 EEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQM 466
EEA+ M KG +PD Y +FI G+ M
Sbjct: 445 EEAVSFFNDMVKKGIKPD---YISFIAILTACGHTGM 478
>AT5G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5213290-5215296 FORWARD
Length = 668
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 287 KMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFE 346
++ ++ +L +EM+ G + I + G+ ++A+EF ME G +
Sbjct: 412 RVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMA 471
Query: 347 HLINGYCKVGDVDSAILVYKDMLQKDFRPEAS-TIGMLIEGLCEKKRVSEALEIIRNAMR 405
L+ GYC G++D A++ ++ M+ A + L+ C K +V +A +++ +
Sbjct: 472 SLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVT 531
Query: 406 DVSFCPSRKSYE-----LLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKK 460
P +Y+ LL K++ DG EEAL L M GF P D F+ +
Sbjct: 532 KNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPP---FIDPFMSYFSS 588
Query: 461 LGNDQMAATLIMEMS 475
G A + M+
Sbjct: 589 TGKSTEALGFLKAMT 603
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 25/303 (8%)
Query: 180 IEIVRMLRSRGI----SPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRP 235
I + R + S G+ S + R CN L+ +KC + +FRE+
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-----------R 360
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
V S+ ++ G+ R+G +++ EME G P++Y+ ++ + E +++
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 296 EEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKV 355
E ++ L D+ N ++ + K G +++AE F EM + + +++ +I GY K
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI----ISWNTIIGGYSKN 476
Query: 356 GDVDSAILVYKDML-QKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPSRK 414
+ A+ ++ +L +K F P+ T+ ++ + EI MR+ F R
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF-SDRH 535
Query: 415 SYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMAATLIMEM 474
L+ + G + A L +A K DL + I GY G + A L +M
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASK----DLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 475 SRT 477
+
Sbjct: 592 RQA 594
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 157/386 (40%), Gaps = 63/386 (16%)
Query: 102 DLYSYSTIVHILSRARLKVQALSIIKSALVSRCLFDCNNAPVKF-FEMLLKTYRQCDSAP 160
DL +++T++ ++A+L A+S+ K + P +F F LL T D
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHI------IGVKPDEFTFGSLLATSLDLDVLE 406
Query: 161 FVFDLLIKSCLELKKIDGSIEIVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFRE 220
V +IK G+S +I N LIS +K G + E
Sbjct: 407 MVQACIIK--------------------FGLSSKIEISNALISAYSK-NGQIEKADLLFE 445
Query: 221 IFGLRDGDSKVRLRPDVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCV--------PNL 272
LR ++ S+N ++ GFY +G + +ERF C+ P+
Sbjct: 446 ----------RSLRKNLISWNAIISGFYHNGF------PFEGLERFSCLLESEVRILPDA 489
Query: 273 YSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKE 332
Y+ + L+++ + + + G + N +I + + G I+ + E F +
Sbjct: 490 YTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ 549
Query: 333 MELGGVESNSVTFEHLINGYCKVGDVDSAILVYKDML-QKDFRPEASTIGMLIEGLCEKK 391
M E + V++ LI+ Y + G+ ++A+ YK M + P+A+T ++
Sbjct: 550 MS----EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 392 RVSEALEIIRNAMRDVSFCPSRKSYELLIKRLCEDGQMEEA---LKLQAKMAGKGFEPDL 448
V E LEI + + + + L+ L G ++EA +K+ K G +
Sbjct: 606 LVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWW 665
Query: 449 KIYDA-FIEGYKKLGNDQMAATLIME 473
++ A G KLG +M A L+ME
Sbjct: 666 ALFSACAAHGDLKLG--KMVAKLLME 689
>AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24672008-24673471 REVERSE
Length = 487
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Query: 240 FNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFC-------GEGKMREAE 292
+ L+ G+ ++ V +M+ G P+L+ +N L+ C G + EA
Sbjct: 211 YRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEAL 270
Query: 293 KLWEEMRVKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGY 352
+ EMR ++ +YN ++ ++ ++ ++ + ++M+ G + ++ ++ ++
Sbjct: 271 NIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL 330
Query: 353 CKVGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCPS 412
G + +M+++ FRPE LI LC +RV+ AL++ M+ S
Sbjct: 331 YLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLF-EKMKRSSVGGY 389
Query: 413 RKSYELLIKRLCEDGQMEEALKL 435
+ Y+LLI +LC+ G E+ +L
Sbjct: 390 GQVYDLLIPKLCKGGNFEKGREL 412
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 90/191 (47%)
Query: 182 IVRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGLRDGDSKVRLRPDVHSFN 241
+++ ++S GI+P + N L++C+ + + G+ E + +++P S+N
Sbjct: 230 VIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYN 289
Query: 242 DLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVK 301
L+ R + ++ +M+R GC P+ SY ++ + G+ + ++ +EM +
Sbjct: 290 ILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIER 349
Query: 302 GLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSA 361
G R + Y +IG ++ A + F++M+ V ++ LI CK G+ +
Sbjct: 350 GFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKG 409
Query: 362 ILVYKDMLQKD 372
++++ L D
Sbjct: 410 RELWEEALSID 420
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 103/230 (44%), Gaps = 14/230 (6%)
Query: 236 DVHSFNDLMMGFYRDGEMEMIEEVWNEMERFGCVPNLYSYNILMALFCGEGKMREAEKLW 295
D +F+ + + G+ E ++ +++F C + ++ +++ C G ++ A +
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM 196
Query: 296 EEMR--VKGLRLDVTAYNTIIGGFYKSGQIEKAEEFFKEMELGGVESNSVTFEHLINGYC 353
+ + G L V Y +++ G+ +++A ++M+ G+ + F L+ C
Sbjct: 197 HHHKDVISGNELSV--YRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLC 254
Query: 354 K-------VGDVDSAILVYKDMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRD 406
+ G V A+ + +M +P + + +L+ L +RV E+ +I+ R
Sbjct: 255 ERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKR- 313
Query: 407 VSFC-PSRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFI 455
S C P SY +++ L G+ + ++ +M +GF P+ K Y I
Sbjct: 314 -SGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLI 362
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 164/416 (39%), Gaps = 76/416 (18%)
Query: 118 LKVQALSIIKSALVS------RCLFDCNNAPVKFFEMLLKTYRQCDSAPFVFDLLIKSCL 171
LK S+IK+ L+S R L C +P L R PFV++ +I+
Sbjct: 41 LKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFS 100
Query: 172 ELKKIDGSIEI-VRMLRSRGISPQIRTCNLLISCVAKCKGSCAGYGIFREIFGL--RDG- 227
+ +I I + ML S SP ++ L V K G R++ G+ ++G
Sbjct: 101 RSSFPEMAISIFIDMLCS---SPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 228 --DSKVR-----------------------LRPDVHSFNDLMMGFYRDGEMEMIEEVWNE 262
DS +R + DV ++N ++MGF + G ++ + +++E
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 263 MERFGCVPNLYSYNILMALFCGEGKMREAEKLWEEMRVKGLRLDVTAYNTIIGGFYKSGQ 322
M + N S+N +++ F G+ ++A ++ EM+ K ++ D +++ G
Sbjct: 218 MPQ----RNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGA 273
Query: 323 IEKAEEFFKEMELGGVESNSVTFEHLINGYCKVGDVDSAILVYK---------------- 366
E+ + + E NS+ LI+ YCK G ++ + V++
Sbjct: 274 SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG 333
Query: 367 ---------------DMLQKDFRPEASTIGMLIEGLCEKKRVSEALEIIRNAMRDVSFCP 411
++ + P++ + ++ V A E R P
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEP 393
Query: 412 SRKSYELLIKRLCEDGQMEEALKLQAKMAGKGFEPDLKIYDAFIEGYKKLGNDQMA 467
S K Y L++ L G +EEA L M E D I+ + + +K+GN +MA
Sbjct: 394 SIKHYTLMVNVLGGAGLLEEAEALIKNMP---VEEDTVIWSSLLSACRKIGNVEMA 446