Jatropha Genome Database

JcCB0124021.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0124021.20 - phase: 0 /partial
         (550 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42620.1 | Symbols: MAX2, ORE9, PP2 | MAX2 (MORE AXILLARY BRA...   652   0.0  

>AT2G42620.1 | Symbols: MAX2, ORE9, PP2 | MAX2 (MORE AXILLARY
           BRANCHES 2); ubiquitin-protein ligase |
           chr2:17756170-17758251 FORWARD
          Length = 693

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/534 (61%), Positives = 392/534 (73%), Gaps = 19/534 (3%)

Query: 28  FLLLDEDLPPVLQAYPDVSKSLTCLDLLTVSLTDGFKAHEIRVITAACTNLTKFLVVCMF 87
           F    EDLPPVL  Y DV+  LT LDLLT S T+G+K+ EI  IT +C NL  F V C F
Sbjct: 168 FYHWTEDLPPVLLRYADVAARLTRLDLLTASFTEGYKSSEIVSITKSCPNLKTFRVACTF 227

Query: 88  DPSYLGFIGDETLLAIAANCPKLSVLHLVDTSSLGNTRHDPEDEGYTGEDARISVVGLVD 147
           DP Y  F+GDETL A+A + PKL++LH+VDT+SL N R  P   G    D+ ++   L++
Sbjct: 228 DPRYFEFVGDETLSAVATSSPKLTLLHMVDTASLANPRAIP---GTEAGDSAVTAGTLIE 284

Query: 148 FFSGLPXXXXXXXXXXKNVRDSAVAFEALNSRCPKLKVLNLEQFHGICMAVE-SQLDGIA 206
            FSGLP          K+V+ S VA EALNS+C KL+VL L QF G+C A E  +LDG+A
Sbjct: 285 VFSGLPNLEELVLDVGKDVKHSGVALEALNSKCKKLRVLKLGQFQGVCSATEWRRLDGVA 344

Query: 207 LCSGLESLSIKKAADLTDMGLIEIARGCHKLAKFEVEGCKKITMKGIRTMASLLHKTLIE 266
           LC GL+SLSIK + DLTDMGL+ I RGC KL  FE++GC+ +T+ G+RTM SL  KTL +
Sbjct: 345 LCGGLQSLSIKNSGDLTDMGLVAIGRGCCKLTTFEIQGCENVTVDGLRTMVSLRSKTLTD 404

Query: 267 VKISACKNLDTAAILRALEPIRSRIERLHIDCIWDGLPES-------TCAANHSFNLNDN 319
           V+IS CKNLDTAA L+A+EPI  RI+RLHIDC+W G  +        T  A+H     D+
Sbjct: 405 VRISCCKNLDTAASLKAIEPICDRIKRLHIDCVWSGSEDEEVEGRVETSEADH--EEEDD 462

Query: 320 LFDESSSKNKRLKYSSDARYVE-SDLDGFWC--KSWDKLRYLSLWIGVGELLNPLPMAGL 376
            ++ S    KR KYS +  +   SD++GF    + W+KL YLSLWI VGE L PLPM GL
Sbjct: 463 GYERS---QKRCKYSFEEEHCSTSDVNGFCSEDRVWEKLEYLSLWINVGEFLTPLPMTGL 519

Query: 377 EDCPSLEEIRIRVEGDCRGRHKPLQHAFGLSCLAQYHRLSKMQLDCSDTIGFALTAPSGQ 436
           +DCP+LEEIRI++EGDCRG+ +P +  FGLSCLA Y +LSKMQLDC DTIGFALTAP  Q
Sbjct: 520 DDCPNLEEIRIKIEGDCRGKRRPAEPEFGLSCLALYPKLSKMQLDCGDTIGFALTAPPMQ 579

Query: 437 MDLSLWERFFLNGIGNLSLNELDYWPPQDRDVNQRSLSLPGAGLLAECLTLRKLFIHGTA 496
           MDLSLWERFFL GIG+LSL+ELDYWPPQDRDVNQRSLSLPGAGLL ECLTLRKLFIHGTA
Sbjct: 580 MDLSLWERFFLTGIGSLSLSELDYWPPQDRDVNQRSLSLPGAGLLQECLTLRKLFIHGTA 639

Query: 497 HEHFMMFLLRIPNLRDVQLREDYYPAPENDMSTEMRADSCCRFEDALNRRHILD 550
           HEHFM FLLRIPNLRDVQLR DYYPAPENDMSTEMR  SC RFED LN R+I+D
Sbjct: 640 HEHFMNFLLRIPNLRDVQLRADYYPAPENDMSTEMRVGSCSRFEDQLNSRNIID 693