Jatropha Genome Database

JcCB0124021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0124021.10 + phase: 0 /pseudo/partial
         (122 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G58640.2 | Symbols:  | protein kinase family protein | chr3:2...   132   5e-32
AT3G58640.1 | Symbols:  | protein kinase family protein | chr3:2...   132   5e-32
AT2G31010.1 | Symbols:  | protein kinase family protein | chr2:1...   116   3e-27
AT2G42640.1 | Symbols:  | ATP binding / protein kinase/ protein ...    99   4e-22
AT5G11850.1 | Symbols:  | protein kinase family protein | chr5:3...    50   3e-07
AT4G24480.1 | Symbols:  | serine/threonine protein kinase, putat...    47   3e-06

>AT3G58640.2 | Symbols:  | protein kinase family protein |
           chr3:21687153-21692675 REVERSE
          Length = 809

 Score =  132 bits (332), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/69 (78%), Positives = 63/69 (91%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTL RPWEGVPPERVVYA+A EG+RLEIPEGPLG+LI+DCW EP +RPSC EILSR
Sbjct: 741 MWELCTLTRPWEGVPPERVVYAIAYEGARLEIPEGPLGKLIADCWTEPEQRPSCNEILSR 800

Query: 114 LLDCEYTLC 122
           LLDCEY+LC
Sbjct: 801 LLDCEYSLC 809


>AT3G58640.1 | Symbols:  | protein kinase family protein |
           chr3:21687153-21692675 REVERSE
          Length = 809

 Score =  132 bits (332), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/69 (78%), Positives = 63/69 (91%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTL RPWEGVPPERVVYA+A EG+RLEIPEGPLG+LI+DCW EP +RPSC EILSR
Sbjct: 741 MWELCTLTRPWEGVPPERVVYAIAYEGARLEIPEGPLGKLIADCWTEPEQRPSCNEILSR 800

Query: 114 LLDCEYTLC 122
           LLDCEY+LC
Sbjct: 801 LLDCEYSLC 809


>AT2G31010.1 | Symbols:  | protein kinase family protein |
           chr2:13194939-13199642 FORWARD
          Length = 775

 Score =  116 bits (290), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 62/69 (89%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ + TL +PWEGVPPE+VV+AVA+EGSRLEIP+GPL +LI+DCWAEP ERP+CEEIL  
Sbjct: 707 MWELSTLRKPWEGVPPEKVVFAVAHEGSRLEIPDGPLSKLIADCWAEPEERPNCEEILRG 766

Query: 114 LLDCEYTLC 122
           LLDCEYTLC
Sbjct: 767 LLDCEYTLC 775


>AT2G42640.1 | Symbols:  | ATP binding / protein kinase/ protein
           serine/threonine kinase/ protein tyrosine kinase |
           chr2:17758532-17763708 REVERSE
          Length = 783

 Score = 99.4 bits (246), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 58/69 (84%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ + TL++PW+GVP E+V++ VANEG+RL+IPEGPL +LI+DCW+EP +RPSC+EIL R
Sbjct: 715 MWELSTLSKPWKGVPKEKVIHIVANEGARLKIPEGPLQKLIADCWSEPEQRPSCKEILHR 774

Query: 114 LLDCEYTLC 122
           L  CE  +C
Sbjct: 775 LKTCEIPIC 783


>AT5G11850.1 | Symbols:  | protein kinase family protein |
           chr5:3816632-3821024 REVERSE
          Length = 880

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCW-AEPHERPSCEE 109
           L+ + T   PW+G+ P +VV AV  +  RLEIP+     + ++I +CW  EPH RPS  +
Sbjct: 797 LWELATSRVPWKGLNPMQVVGAVGFQNRRLEIPDDIDLTVAQIIRECWQTEPHLRPSFTQ 856

Query: 110 ILSRL 114
           ++  L
Sbjct: 857 LMQSL 861


>AT4G24480.1 | Symbols:  | serine/threonine protein kinase, putative
           | chr4:12650410-12654755 FORWARD
          Length = 963

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGP---LGRLISDCWA-EPHERPSCEE 109
           L+ + TL +PW G+ P +VV AVA +  RL IP      L  L+  CWA EP +RP+   
Sbjct: 871 LWELITLQQPWNGLSPAQVVGAVAFQNRRLIIPPNTSPVLVSLMEACWADEPSQRPAFGS 930

Query: 110 ILSRL 114
           I+  L
Sbjct: 931 IVDTL 935