Jatropha Genome Database

JcCB0121711.20

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0121711.20 - phase: 0 /pseudo/partial
         (216 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G53520.1 | Symbols:  | chalcone-flavanone isomerase-related |...   253   5e-68
AT5G05270.2 | Symbols:  | chalcone-flavanone isomerase family pr...    60   1e-09
AT5G05270.1 | Symbols:  | chalcone-flavanone isomerase family pr...    60   1e-09
AT3G55120.1 | Symbols: TT5, A11, CFI | TT5 (TRANSPARENT TESTA 5)...    57   7e-09

>AT1G53520.1 | Symbols:  | chalcone-flavanone isomerase-related |
           chr1:19976485-19977915 REVERSE
          Length = 287

 Score =  253 bits (647), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 126/204 (61%), Positives = 151/204 (74%)

Query: 12  YTEEPATNVRFQTXXXXXXXXXXXXXXGTGYREKVFAIIGVKVYAAGLYVNPSILSALDT 71
           Y EE AT+V+F+               GTG+REK FAIIGVKVYAAG YVN SILS L  
Sbjct: 83  YAEETATSVKFKRSVTLPGCSSPLSLLGTGFREKKFAIIGVKVYAAGYYVNESILSGLSA 142

Query: 72  WKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTLVD 131
           W G+S  EI  +++ F SIFQA  EKSLQIVLVRDVDGKTFWDALD+AISPRIK+P+  D
Sbjct: 143 WTGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDVDGKTFWDALDEAISPRIKSPSSED 202

Query: 132 ESALSAFRSVFQDRALKKGTFIFLTWLDPSKLLICVSSDGIPSSVDATIESANVASALFD 191
            +ALS FR +FQ+R L KG+ I LTW++ S +L+ VSS G+P++VDATIES NV SALFD
Sbjct: 203 TTALSTFRGIFQNRPLNKGSVILLTWINTSNMLVSVSSGGLPTNVDATIESGNVTSALFD 262

Query: 192 VFFGDASVSPSLKASVTTGLATIL 215
           VFFGD+ VSP+LK+SV   LA  L
Sbjct: 263 VFFGDSPVSPTLKSSVANQLAMTL 286


>AT5G05270.2 | Symbols:  | chalcone-flavanone isomerase family
           protein | chr5:1563543-1564827 FORWARD
          Length = 209

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 11/185 (5%)

Query: 39  GTGYREKVFAIIGVKVYAAGLYVNPS-ILSALDTWKGQSTAEIHGNAAFFSSIFQAALEK 97
           G G  +     + VK  A G+Y++PS + + LD WKG++  E+ G+  FF ++  A +EK
Sbjct: 27  GQGITDIEIHFLQVKFTAIGVYLDPSDVKTHLDNWKGKTGKELAGDDDFFDALASAEMEK 86

Query: 98  SLQIVLVRDVDGKTFWDALDDAISPRIKAPTLVDESALSAFRSV---FQDRALKKGTFIF 154
            +++V+++++ G  +   L++ +  R+      +E   +    V   FQ +  K  + I 
Sbjct: 87  VIRVVVIKEIKGAQYGVQLENTVRDRLAEEDKYEEEEETELEKVVGFFQSKYFKANSVI- 145

Query: 155 LTWLDPSKLLIC---VSSDGIPSSVDATIESANVASALFDVFF-GDASVSPSLKASVTTG 210
            T+   +K  IC     ++G        +E+ANV   +   +  G   VSPS   S+   
Sbjct: 146 -TYHFSAKDGICEIGFETEG-KEEEKLKVENANVVGMMQRWYLSGSRGVSPSTIVSIADS 203

Query: 211 LATIL 215
           ++ +L
Sbjct: 204 ISAVL 208


>AT5G05270.1 | Symbols:  | chalcone-flavanone isomerase family
           protein | chr5:1563492-1564827 FORWARD
          Length = 209

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 11/185 (5%)

Query: 39  GTGYREKVFAIIGVKVYAAGLYVNPS-ILSALDTWKGQSTAEIHGNAAFFSSIFQAALEK 97
           G G  +     + VK  A G+Y++PS + + LD WKG++  E+ G+  FF ++  A +EK
Sbjct: 27  GQGITDIEIHFLQVKFTAIGVYLDPSDVKTHLDNWKGKTGKELAGDDDFFDALASAEMEK 86

Query: 98  SLQIVLVRDVDGKTFWDALDDAISPRIKAPTLVDESALSAFRSV---FQDRALKKGTFIF 154
            +++V+++++ G  +   L++ +  R+      +E   +    V   FQ +  K  + I 
Sbjct: 87  VIRVVVIKEIKGAQYGVQLENTVRDRLAEEDKYEEEEETELEKVVGFFQSKYFKANSVI- 145

Query: 155 LTWLDPSKLLIC---VSSDGIPSSVDATIESANVASALFDVFF-GDASVSPSLKASVTTG 210
            T+   +K  IC     ++G        +E+ANV   +   +  G   VSPS   S+   
Sbjct: 146 -TYHFSAKDGICEIGFETEG-KEEEKLKVENANVVGMMQRWYLSGSRGVSPSTIVSIADS 203

Query: 211 LATIL 215
           ++ +L
Sbjct: 204 ISAVL 208


>AT3G55120.1 | Symbols: TT5, A11, CFI | TT5 (TRANSPARENT TESTA 5);
           chalcone isomerase | chr3:20430248-20431415 REVERSE
          Length = 246

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 12/175 (6%)

Query: 46  VFAIIGVKVYAAGLYVNPSILSALDT-WKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLV 104
           +F +IGV       Y+  + + +L   WKG++T E+  +  FF  I   A EK +++ + 
Sbjct: 57  IFTVIGV-------YLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMK 109

Query: 105 RDVDGKTFWDALDD---AISPRIKAPTLVDESALSAFRSVFQDRALKKGTFIFLTWLDPS 161
             + G+ + + + +   AI  ++   T  +  A+  F  +F++     G+ I        
Sbjct: 110 LPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTG 169

Query: 162 KLLICVSS-DGIPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLATIL 215
            L +  S  D IP +  A IE+  +A A+ +   G   VSP  + SV   L+ ++
Sbjct: 170 SLTVAFSKDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSVAERLSQLM 224