Jatropha Genome Database
- JcCB0121611.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0121611.20 - phase: 1 /partial
(356 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 471 e-133
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 3e-90
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 1e-85
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 310 9e-85
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 5e-84
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 304 5e-83
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 3e-82
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 5e-82
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 290 1e-78
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 2e-78
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 3e-78
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 5e-78
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 4e-77
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 5e-77
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 1e-76
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 2e-76
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 5e-76
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 280 1e-75
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 1e-75
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 2e-75
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 5e-75
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 1e-74
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 7e-74
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 274 7e-74
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 4e-73
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 271 7e-73
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 1e-72
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 1e-72
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 2e-72
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 6e-72
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 268 6e-72
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 267 7e-72
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 267 8e-72
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 1e-70
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 6e-70
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 7e-70
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 260 9e-70
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 1e-69
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 258 3e-69
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 258 4e-69
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 1e-68
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 2e-68
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 3e-68
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 254 7e-68
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 1e-67
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 252 2e-67
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 3e-67
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 8e-67
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 8e-67
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 250 8e-67
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 249 2e-66
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 2e-66
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 249 3e-66
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 4e-66
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 5e-66
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 5e-66
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 6e-66
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 1e-65
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 1e-65
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 3e-65
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 3e-65
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 4e-65
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 5e-65
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 5e-65
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 7e-65
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 242 2e-64
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 3e-64
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 241 4e-64
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 8e-64
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 8e-64
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 240 8e-64
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 1e-63
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 3e-63
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 3e-63
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 3e-63
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 7e-63
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 3e-62
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 3e-62
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 4e-62
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 5e-62
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 6e-62
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 7e-62
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 1e-61
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 2e-61
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 3e-61
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 4e-61
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 231 5e-61
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 8e-61
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 8e-61
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 4e-60
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 5e-60
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 6e-60
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 1e-59
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 1e-59
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 1e-59
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 2e-59
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 2e-59
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 2e-59
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 3e-59
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 7e-59
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 223 1e-58
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 223 1e-58
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 2e-58
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 3e-58
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 3e-58
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 4e-58
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 4e-58
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 7e-58
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 8e-58
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 1e-57
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 1e-57
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 219 3e-57
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 4e-57
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 5e-57
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 218 6e-57
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 6e-57
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 7e-57
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 8e-57
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 9e-57
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 217 1e-56
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 3e-56
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 3e-56
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 4e-56
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 6e-56
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 6e-56
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 8e-56
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 9e-56
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 1e-55
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 212 4e-55
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 4e-55
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 3e-54
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 4e-54
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 5e-54
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 6e-54
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 7e-54
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 7e-54
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 8e-54
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 207 1e-53
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 206 2e-53
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 3e-53
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 4e-53
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 5e-53
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 2e-52
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 202 4e-52
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 7e-52
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 2e-51
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 199 3e-51
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 3e-51
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 5e-51
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 7e-51
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 9e-51
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 1e-50
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 196 1e-50
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 1e-50
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 5e-50
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 5e-50
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 1e-49
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 3e-49
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 9e-49
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 190 9e-49
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 190 1e-48
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 190 1e-48
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 3e-46
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 1e-45
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 8e-45
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 1e-44
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 8e-44
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 2e-43
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 172 4e-43
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 5e-43
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 2e-42
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 2e-37
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 9e-33
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 121 9e-28
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 120 9e-28
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 7e-27
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 4e-26
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 99 5e-21
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 1e-20
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 96 5e-20
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 8e-20
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 92 4e-19
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 92 4e-19
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 4e-19
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 92 5e-19
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 5e-18
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 6e-18
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 8e-17
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 84 2e-16
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 84 2e-16
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 4e-16
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 4e-16
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 9e-16
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 2e-15
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 80 2e-15
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 80 2e-15
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 79 5e-15
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 7e-15
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 8e-15
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 9e-15
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 77 1e-14
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 77 1e-14
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 77 1e-14
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 77 2e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 3e-14
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 3e-14
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 76 3e-14
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 4e-14
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 75 5e-14
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 74 1e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 74 2e-13
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 73 3e-13
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 72 5e-13
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 8e-13
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 9e-13
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 71 1e-12
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 70 2e-12
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 70 2e-12
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 70 2e-12
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 70 2e-12
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 69 6e-12
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 8e-12
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 68 8e-12
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 66 3e-11
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 64 2e-10
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 63 3e-10
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 62 4e-10
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 62 6e-10
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 1e-09
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 7e-09
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 8e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 58 9e-09
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 58 9e-09
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 58 1e-08
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G77150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-08
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 4e-08
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 55 6e-08
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 1e-07
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 3e-07
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 52 5e-07
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 9e-07
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 9e-07
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 50 1e-06
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 2e-06
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 49 4e-06
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-06
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 219/356 (61%), Positives = 277/356 (77%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ AK +F MPERNL SWNA+V GLVK GDL+NA+K+FD+MP+RD++S+T MIDGYAK G
Sbjct: 193 EEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGG 252
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
D+ SAR LF++A D WS LI GYAQNG PNEA K+F M NVKPDE+IMV LMS
Sbjct: 253 DMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMS 312
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
ACSQ+G +L + VD YL Q +VV ALIDMNAKCG+MDRA KLFEEMP+RDL
Sbjct: 313 ACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLV 372
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
SYCSM++G++IHG +A+ LF KM++EG++PD AFTVIL C RLVEEG YFE M
Sbjct: 373 SYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELM 432
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
+ KYS++ SP+HY+C+V+LLSR+G+LKEAYEL+KSMP E+HASAWG+LLG C +G E+
Sbjct: 433 RKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEI 492
Query: 301 GEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
E+VA LFELEP+++ YVLLS+IYAA D+W DV+H+++KM E G+ K+ G SWI
Sbjct: 493 AEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 19/240 (7%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
++DVV T +D Y K D+ SAR +F + P+R+A W+ L+ Y ++G EA +F
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDL 201
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M N+ ++ L+ + G+L AK + + + I I T ++ID AK G
Sbjct: 202 MPERNLGSWNALVDGLVKS----GDLVNAKKLFDEMPKRDI-ISYT----SMIDGYAKGG 252
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+M A LFEE D+ ++ ++I G + +G +A +F++M + + PD +++
Sbjct: 253 DMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMS 312
Query: 223 ACSH---GRLVEEGKHYFETMKSKYSMVPSPEHYA--CMVDLLSRSGQLKEAYELLKSMP 277
ACS L E+ Y +K+S HY ++D+ ++ G + A +L + MP
Sbjct: 313 ACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 12/223 (5%)
Query: 68 LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV-KPDEYIMVSLMSACSQVG 126
+F++ P +LW+ LI GY+ L E + I M + +PDEY +M CS G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 127 NLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMI 186
+ + V + + D V + +D KC ++ A K+F EMP+R+ S+ +++
Sbjct: 125 QVRVGSSVHGLVLRIGFD-KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 187 QGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM 246
G E+A +F+ M L NA ++ + G LV K F+ M + +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS---GDLV-NAKKLFDEMPKRDII 239
Query: 247 VPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
Y M+D ++ G + A +L + AW AL+
Sbjct: 240 -----SYTSMIDGYAKGGDMVSARDLFEE-ARGVDVRAWSALI 276
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 237/356 (66%), Gaps = 1/356 (0%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A+ +F +MPERN SWNAM+ G V+G + A+++FD MP R+V ++ MI GYA+ G
Sbjct: 298 EEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCG 357
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
I+ A+ LFDK PKRD W+ +I+GY+Q+G EAL++F ME + + S +S
Sbjct: 358 KISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALS 417
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
C+ V L+L K + L + + G V AL+ M KCG+++ AN LF+EM +D+
Sbjct: 418 TCADVVALELGKQLHGRLVKGGYETG-CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S+ +MI G S HG+ E A+ F M EGL PD+A +L+ACSH LV++G+ YF TM
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
Y ++P+ +HYACMVDLL R+G L++A+ L+K+MP E A+ WG LLGA + +G EL
Sbjct: 537 TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTEL 596
Query: 301 GEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
E A+++F +EPENS YVLLS++YA++ +W DV ++ +M+++G++K+PG SWI
Sbjct: 597 AETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 652
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 155/313 (49%), Gaps = 32/313 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A RVF +MP + S+N M+ G ++ G+ ARK+FD+MPERD+VS+ VMI GY +
Sbjct: 81 NEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNR 140
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME--------------LM 106
++ AR LF+ P+RD W+ ++SGYAQNG ++A +F M +
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 107 NVKPDEYIMV-------SLMS-ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
N K +E M+ +L+S C G + K V+ S+++ +I
Sbjct: 201 NSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGY 260
Query: 159 AKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
A+ G +D A +LF+E P +D+F++ +M+ G + E+A LF+KM + NA
Sbjct: 261 AQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNA--- 317
Query: 219 VILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
+L G +E K F+ M + + + M+ ++ G++ EA L MP
Sbjct: 318 -MLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 279 ESHASAWGALLGA 291
S W A++
Sbjct: 372 RDPVS-WAAMIAG 383
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 149/344 (43%), Positives = 225/344 (65%), Gaps = 2/344 (0%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
NLT NAM+ K G + +A+++FD M E+D V++T M+DGYA D +AR + + P
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLAK 132
++D W+ LIS Y QNG PNEAL +F ++L N+K ++ +VS +SAC+QVG L+L +
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
W+ Y+ + I + HV +ALI M +KCG+++++ ++F + KRD+F + +MI GL++H
Sbjct: 386 WIHSYIKKHGIRMN-FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G +AV +F KM + P+ FT + ACSH LV+E + F M+S Y +VP +H
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
YAC+VD+L RSG L++A + +++MP+ S WGALLGACK + + L E+ RL ELE
Sbjct: 505 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Query: 313 PENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
P N +VLLS+IYA +W +VS ++ M+ GL+K PGCS I
Sbjct: 565 PRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 177/402 (44%), Gaps = 79/402 (19%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-------PERDVVSFTV---- 51
A++VF ++P+ N +WN ++ G D + + F DM P + F +
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 52 -----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+I Y GD+ SA +F ++D W+
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+G+ Q G P++AL++F+ ME +VK MV ++SAC+++ NL+ + V Y+ ++
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+++ T + A++DM KCG+++ A +LF+ M ++D ++ +M+ G +I E A +
Sbjct: 263 VNVNLT-LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVL 321
Query: 203 NKMLNEGLIPDNAAFTV--------------------------------ILTACSHGRLV 230
N M + ++ NA + L+AC+ +
Sbjct: 322 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 381
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
E G+ + + K+ + + + ++ + S+ G L+++ E+ S+ + W A++G
Sbjct: 382 ELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIG 439
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPY-VLLSSIYAAADQ 331
+G G + ++++ N P V ++++ A
Sbjct: 440 GLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
+ ++ VF + +R++ W+AM+GGL G A +F M E +V V+FT +
Sbjct: 417 EKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC 476
Query: 57 AKVGDIASARALFDKAPKRDAFL-----WSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+ G + A +LF + + ++ ++ ++G +A+K +E M + P
Sbjct: 477 SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF---IEAMPIPPS 533
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ +L+ AC NL+LA+ L + HV+ L ++ AK G + ++L
Sbjct: 534 TSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL--LSNIYAKLGKWENVSELR 591
Query: 172 EEM 174
+ M
Sbjct: 592 KHM 594
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 310 bits (794), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 151/386 (39%), Positives = 244/386 (63%), Gaps = 34/386 (8%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYA---- 57
+A ++F +M ER+ SWN+M+GGLVK G+L +AR++FD+MP+RD++S+ M+DGYA
Sbjct: 172 DAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCRE 231
Query: 58 ---------------------------KVGDIASARALFDKAP--KRDAFLWSVLISGYA 88
K GD+ AR +FDK P ++ W+++I+GYA
Sbjct: 232 MSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYA 291
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
+ GL EA ++ M +K D ++S+++AC++ G L L + L +S++
Sbjct: 292 EKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG-SNA 350
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+V+ AL+DM AKCGN+ +A +F ++PK+DL S+ +M+ GL +HG+ ++A+ LF++M E
Sbjct: 351 YVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE 410
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G+ PD F +L +C+H L++EG YF +M+ Y +VP EHY C+VDLL R G+LKE
Sbjct: 411 GIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKE 470
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAA 328
A +++++MP+E + WGALLGAC+ + EV++ + V + L +L+P + Y LLS+IYAA
Sbjct: 471 AIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAA 530
Query: 329 ADQWLDVSHVKNKMKERGLRKLPGCS 354
A+ W V+ +++KMK G+ K G S
Sbjct: 531 AEDWEGVADIRSKMKSMGVEKPSGAS 556
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 44/273 (16%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A +F++ + + L + LI +AQN P +A +F M+ + D + L+ ACS
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG---------------------- 162
L + K + ++ + + +V ALID ++CG
Sbjct: 130 QSWLPVVKMMHNHIEKLGLS-SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSW 188
Query: 163 -----------NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
+ A +LF+EMP+RDL S+ +M+ G + +A LF KM +
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV 248
Query: 212 PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYE 271
+++ ++ S +E + F+ M V + + ++ + G LKEA
Sbjct: 249 ----SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT---WTIIIAGYAEKGLLKEADR 301
Query: 272 LLKSM---PVESHASAWGALLGACKFYGEVELG 301
L+ M ++ A+A ++L AC G + LG
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLG 334
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 308 bits (788), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 218/338 (64%), Gaps = 1/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ K GD+ AR++FD++ +R +VS+T MI GYA+ G + +R LFD ++D
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
LW+ +I G Q +AL +FQ M+ N KPDE M+ +SACSQ+G LD+ W+ Y+
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ S+ + + +L+DM AKCGN+ A +F + R+ +Y ++I GL++HG A A
Sbjct: 416 EKYSLSL-NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ FN+M++ G+ PD F +L+AC HG +++ G+ YF MKS++++ P +HY+ MVD
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LL R+G L+EA L++SMP+E+ A+ WGALL C+ +G VELGE A +L EL+P +S
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLL +Y A+ W D + M ERG+ K+PGCS I
Sbjct: 595 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 632
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 40/279 (14%)
Query: 53 IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
I +A GD+ +AR +FD++P RD W+ LI+GY + G +A+ +++ ME VKPD+
Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
M+ L+S+CS +G+L+ K Y+ ++ + + +V AL+DM +KCG++ A ++F+
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRM-TIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 173 EMPKRDLFSYCSMIQGLSIHGY-------------------------------AEQAVGL 201
+ KR + S+ +MI G + G + A+ L
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEG---KHYFETMKSKYSMVPSPEHYACMVD 258
F +M PD L+ACS ++ G Y E KYS+ + +VD
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE----KYSLSLNVALGTSLVD 432
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ ++ G + EA + + + + + A++G +G+
Sbjct: 433 MYAKCGNISEALSVFHGIQTRN-SLTYTAIIGGLALHGD 470
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 120/238 (50%), Gaps = 10/238 (4%)
Query: 76 DAFLWSVLISGYAQNGLPNEALKIFQGM---ELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
+ F W+V I G++++ P E+ +++ M +PD + L C+ + L
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
+ ++ + +++ +HV A I M A CG+M+ A K+F+E P RDL S+ +I G
Sbjct: 177 MILGHVLKLRLEL-VSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G AE+A+ ++ M +EG+ PD+ ++++CS + GK ++E +K + P
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
A M D+ S+ G + EA + ++ + S W ++ G ++ V+ +LF+
Sbjct: 296 NALM-DMFSKCGDIHEARRIFDNLEKRTIVS-WTTMISGYARCGLLD----VSRKLFD 347
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 227/356 (63%), Gaps = 1/356 (0%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A+R F PER++ WN M+ G ++ G+++ AR +FD MP RDV+S+ +++GYA +GD
Sbjct: 77 SARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGD 136
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMS 120
+ + +FD P+R+ F W+ LI GYAQNG +E L F+ M + +V P++ M ++S
Sbjct: 137 MEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
AC+++G D KWV Y + +V ALIDM KCG ++ A ++F+ + +RDL
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S+ +MI GL+ HG+ +A+ LF++M N G+ PD F +L AC H LVE+G YF +M
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
+ +S++P EH C+VDLLSR+G L +A E + MPV++ A W LLGA K Y +V++
Sbjct: 317 FTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDI 376
Query: 301 GEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
GE+ L +LEP N + +V+LS+IY A ++ D + +K M++ G +K G SWI
Sbjct: 377 GEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 145/302 (48%), Gaps = 51/302 (16%)
Query: 21 MVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
+ G L G + +A KVF +M E++VV +T MI+GY D+ SAR FD +P+RD LW
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISGY + G EA +F M C D+ W
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQM-----------------PCR-----DVMSW------- 124
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+++ A G+M+ ++F++MP+R++FS+ +I+G + +G + +G
Sbjct: 125 -----------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLG 173
Query: 201 LFNKMLNEG-LIPDNAAFTVILTACSHGRLVEEGK---HYFETMKSKYSMVPSPEHYACM 256
F +M++EG ++P++A T++L+AC+ + GK Y ET+ Y+ V A +
Sbjct: 174 SFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL--GYNKVDVNVKNA-L 230
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
+D+ + G ++ A E+ K + S W ++ +G G N E++
Sbjct: 231 IDMYGKCGAIEIAMEVFKGIKRRDLIS-WNTMINGLAAHGH---GTEALNLFHEMKNSGI 286
Query: 317 SP 318
SP
Sbjct: 287 SP 288
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 221/343 (64%), Gaps = 8/343 (2%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N M+ VK + ARKVFD+MPERDV+S+T +I YA+VG++ A LF+ P +D
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD--C 136
W+ +++G+AQN P EAL+ F ME ++ DE + +SAC+Q+G +K+ D
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG---ASKYADRAV 304
Query: 137 YLSQSSIDIGQTHVV--AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
++Q S HVV +ALIDM +KCGN++ A +F M +++F+Y SMI GL+ HG
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 195 AEQAVGLFNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY 253
A++A+ LF+ M+ + I P+ F L ACSH LV++G+ F++M + + P+ +HY
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424
Query: 254 ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEP 313
CMVDLL R+G+L+EA EL+K+M VE H WGALLGAC+ + E+ EI A LFELEP
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEP 484
Query: 314 ENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ Y+LLS++YA+A W V V+ +KE+GL+K P SW+
Sbjct: 485 DIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
AR + + R+ FLW+ +I GYA G +EA+ ++ M + P + +L+ AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 125 VGNLDLAKWVDCYLSQ----SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
+ +L+L + + + +G T +IDM KC ++D A K+F+EMP+RD+
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNT-----MIDMYVKCESIDCARKVFDEMPERDVI 216
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S+ +I + G E A LF + + D A+T ++T + +E YF+ M
Sbjct: 217 SWTELIAAYARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRM 272
Query: 241 K 241
+
Sbjct: 273 E 273
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 112/278 (40%), Gaps = 70/278 (25%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
AR+V + + R+ +T +I GYA G FD
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGK-------FD----------------------- 131
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK--------------------W 133
EA+ ++ M + P + +L+ AC + +L+L +
Sbjct: 132 -EAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTM 190
Query: 134 VDCYLSQSSID--------------IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
+D Y+ SID I T ++AA A+ GNM+ A +LFE +P +D+
Sbjct: 191 IDMYVKCESIDCARKVFDEMPERDVISWTELIAAY----ARVGNMECAAELFESLPTKDM 246
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH-GRLVEEGKHYFE 238
++ +M+ G + + ++A+ F++M G+ D ++AC+ G +
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
KS YS + ++D+ S+ G ++EA + SM
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 301 bits (771), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 222/340 (65%), Gaps = 3/340 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
+V KGGD+++A+KVFD MPER +VS T MI YAK G++ +ARALFD +RD
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+V+I GYAQ+G PN+AL +FQ + KPDE +V+ +SACSQ+G L+ +W+ +
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ S I + V LIDM +KCG+++ A +F + P++D+ ++ +MI G ++HGY++
Sbjct: 285 VKSSRIRL-NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQD 343
Query: 198 AVGLFNKMLN-EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
A+ LFN+M GL P + F L AC+H LV EG FE+M +Y + P EHY C+
Sbjct: 344 ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCL 403
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
V LL R+GQLK AYE +K+M +++ + W ++LG+CK +G+ LG+ +A L L +NS
Sbjct: 404 VSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNS 463
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLLS+IYA+ + V+ V+N MKE+G+ K PG S I
Sbjct: 464 GIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 39/274 (14%)
Query: 55 GYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
YA G I + ALF + D FL++ I+ + NGL ++A ++ + + P+E+
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
SL+ +CS K + ++ + + I +V L+D+ AK G++ A K+F+ M
Sbjct: 133 FSSLLKSCSTKS----GKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 175 P-------------------------------KRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
P +RD+ S+ MI G + HG+ A+ LF
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 204 KMLNEGL-IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
K+L EG PD L+ACS +E G+ +KS + + + ++D+ S+
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL-NVKVCTGLIDMYSK 306
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
G L+EA + P AW A++ +G
Sbjct: 307 CGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHG 339
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 219/357 (61%), Gaps = 2/357 (0%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A ++F MPE++L SWN+M+ G VK G + +A+ +FD MP RDVV++ MIDGYAK+G
Sbjct: 231 DIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLG 290
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLM 119
+ A+ LFD+ P RD ++ +++GY QN EAL+IF ME ++ PD+ +V ++
Sbjct: 291 FVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 350
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
A +Q+G L A + Y+ + +G + ALIDM +KCG++ A +FE + + +
Sbjct: 351 PAIAQLGRLSKAIDMHLYIVEKQFYLGGK-LGVALIDMYSKCGSIQHAMLVFEGIENKSI 409
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+ +MI GL+IHG E A + ++ L PD+ F +L ACSH LV+EG FE
Sbjct: 410 DHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFEL 469
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
M+ K+ + P +HY CMVD+LSRSG ++ A L++ MPVE + W L AC + E E
Sbjct: 470 MRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFE 529
Query: 300 LGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
GE+VA L N S YVLLS++YA+ W DV V+ MKER + K+PGCSWI
Sbjct: 530 TGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 586
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 160/319 (50%), Gaps = 48/319 (15%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP--KRD 76
N ++G +K G L +R++FD MP+RD VS+ MIDGY K G I SAR LFD P ++
Sbjct: 153 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 212
Query: 77 AFLWSVLISGYAQ--NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW- 133
W+ +ISGYAQ +G+ + A K+F M P++ DL W
Sbjct: 213 LISWNSMISGYAQTSDGV-DIASKLFADM------PEK----------------DLISWN 249
Query: 134 --VDCYLSQSSID--------IGQTHVV--AALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
+D Y+ I+ + + VV A +ID AK G + A LF++MP RD+ +
Sbjct: 250 SMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 309
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEG-LIPDNAAFTVILTACSH-GRLVEEGKHYFET 239
Y SM+ G + Y +A+ +F+ M E L+PD+ ++L A + GRL + +
Sbjct: 310 YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 369
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
++ ++ + + ++D+ S+ G ++ A + + + +S W A++G +G
Sbjct: 370 VEKQFYL--GGKLGVALIDMYSKCGSIQHAMLVFEGIENKS-IDHWNAMIGGLAIHG--- 423
Query: 300 LGEIVANRLFELEPENSSP 318
LGE + L ++E + P
Sbjct: 424 LGESAFDMLLQIERLSLKP 442
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 63/351 (17%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK------- 71
N + G L+K G + N+ ++ R V++F Y + D A R +F +
Sbjct: 22 NQIHGRLIKTGIIKNS-----NLTTRIVLAFASSRRPY--LADFA--RCVFHEYHVCSFS 72
Query: 72 -APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
D FLW+ +I ++ P +AL + M V D++ + ++ ACS++G +
Sbjct: 73 FGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKG 132
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
+ +L ++ + + LI + KCG + + ++F+ MPKRD SY SMI G
Sbjct: 133 GMQIHGFLKKTGL-WSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYV 191
Query: 191 ----------------------------IHGYAEQAVG------LFNKMLNEGLIPDNAA 216
I GYA+ + G LF M + LI N
Sbjct: 192 KCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWN-- 249
Query: 217 FTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
++I HGR +E+ K F+ M + + +A M+D ++ G + A L M
Sbjct: 250 -SMIDGYVKHGR-IEDAKGLFDVMPRRDVVT-----WATMIDGYAKLGFVHHAKTLFDQM 302
Query: 277 PVESHASAWGALLGACKFYGEVELGEIVANRLFE--LEPENSSPYVLLSSI 325
P + + G + +E EI ++ E L P++++ ++L +I
Sbjct: 303 PHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 353
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 289 bits (739), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 220/358 (61%), Gaps = 8/358 (2%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A++VF +M + NL +WNA++ +G D+ AR++FD M R+ S+ VM+ GY K G++
Sbjct: 160 ARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGEL 219
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
SA+ +F + P RD WS +I G A NG NE+ F+ ++ + P+E + ++SAC
Sbjct: 220 ESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVA---ALIDMNAKCGNMDRANKLFEEM-PKRD 178
SQ G+ + K + ++ ++ G + +V+ ALIDM ++CGN+ A +FE M KR
Sbjct: 280 SQSGSFEFGKILHGFVEKA----GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC 335
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+ S+ SMI GL++HG E+AV LFN+M G+ PD +F +L ACSH L+EEG+ YF
Sbjct: 336 IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS 395
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
MK Y + P EHY CMVDL RSG+L++AY+ + MP+ A W LLGAC +G +
Sbjct: 396 EMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNI 455
Query: 299 ELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
EL E V RL EL+P NS VLLS+ YA A +W DV+ ++ M + ++K S +
Sbjct: 456 ELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 513
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 20/247 (8%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN---VKPDEYIMVSLMSA 121
AR L P+ DAF+++ L+ GY+++ P+ ++ +F +E+M V PD + ++ A
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVF--VEMMRKGFVFPDSFSFAFVIKA 115
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
+L + C + ++ V LI M CG ++ A K+F+EM + +L +
Sbjct: 116 VENFRSLRTGFQMHCQALKHGLE-SHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ ++I A +F+KM L+ ++ ++ V+L +E K F M
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMP 230
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAY----ELLKSMPVESHASAWGALLGACKFYGE 297
+ + ++ M+ ++ +G E++ EL ++ + S G +L AC G
Sbjct: 231 HRDDV-----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG-VLSACSQSGS 284
Query: 298 VELGEIV 304
E G+I+
Sbjct: 285 FEFGKIL 291
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 288 bits (737), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 224/358 (62%), Gaps = 5/358 (1%)
Query: 1 DNAKRVFVQMPE-RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKV 59
D A ++F QMP +++ +NAM+ G VK GD+ +AR++FD+M + V+++T MI GY +
Sbjct: 161 DLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNI 220
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME-LMNVKPDEYIMVSL 118
DI +AR LFD P+R+ W+ +I GY QN P E +++FQ M+ ++ PD+ ++S+
Sbjct: 221 KDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV 280
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD 178
+ A S G L L +W C++ + +D + V A++DM +KCG +++A ++F+EMP++
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLD-KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+ S+ +MI G +++G A A+ LF M+ E PD ++TAC+HG LVEEG+ +F
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVITACNHGGLVEEGRKWFH 398
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
M+ + + EHY CMVDLL R+G LKEA +L+ +MP E + + L AC Y ++
Sbjct: 399 VMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDI 457
Query: 299 ELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
E E + + ELEP+N YVLL ++YAA +W D VKN M++ +K GCS I
Sbjct: 458 ERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLI 515
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 27/312 (8%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ T ++D YAK G + AR FD+ P R W+ LISGY + G + A K+F M
Sbjct: 112 DMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMP 171
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+VK D I ++M + G++ A+ + ++ ++ I T ++ ++ ++
Sbjct: 172 --HVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV-ITWTTMIHGYCNIK----DI 223
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTA 223
D A KLF+ MP+R+L S+ +MI G + ++ + LF +M L PD+ +L A
Sbjct: 224 DAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPA 283
Query: 224 CSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
S + G+ H F K V ++D+ S+ G++++A + MP E
Sbjct: 284 ISDTGALSLGEWCHCFVQRKKLDKKVKVC---TAILDMYSKCGEIEKAKRIFDEMP-EKQ 339
Query: 282 ASAWGALLGACKFYGEVELG-EIVANRLFELEPENSSPYVLLSS-----IYAAADQWLDV 335
++W A++ G ++ + E +P+ + ++++ + +W V
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHV 399
Query: 336 SHVKNKMKERGL 347
M+E GL
Sbjct: 400 ------MREMGL 405
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 18/254 (7%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKR-DAFLWSVLISGYAQNGLPNEALKIFQ 101
E +V FT + A I AR LFD+ P+R D+FL + +I Y + ++ +++
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR 66
Query: 102 GMELMNV-KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDM 157
+ PD + +L +CS L + + L G +V ++DM
Sbjct: 67 DLRKETCFAPDNFTFTTLTKSCS----LSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 158 NAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF 217
AK G M A F+EMP R S+ ++I G G + A LF++M + + D +
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIY 179
Query: 218 TVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
++ + + F+ M K + + M+ + A +L +MP
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 278 VESHASAWGALLGA 291
E + +W ++G
Sbjct: 235 -ERNLVSWNTMIGG 247
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 128/317 (40%), Gaps = 44/317 (13%)
Query: 34 ARKVFDDMPERDVVSFT-VMIDGYAKVGDIASARALFDKAPKR-----DAFLWSVLISGY 87
ARK+FD P+RD + MI Y + + AL+ K D F ++ L
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 88 AQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK-------------W- 133
+ + + L++ + D Y+ ++ ++ G + A+ W
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 134 --VDCYLSQSSIDIGQT------HV-----VAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
+ Y+ +D+ HV A++D K G+M A +LF+EM + +
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI 208
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
++ +MI G + A LF+ M L+ N T+I C + + +EG F+ M
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWN---TMIGGYCQN-KQPQEGIRLFQEM 264
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQL---KEAYELLKSMPVESHASAWGALLGACKFYGE 297
++ S+ P ++ +S +G L + + ++ ++ A+L GE
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 298 VELGEIVANRLFELEPE 314
+E A R+F+ PE
Sbjct: 325 IE----KAKRIFDEMPE 337
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 288 bits (736), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 214/330 (64%), Gaps = 1/330 (0%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G+L+NA+K+FD+MP+RD V+ TVMI+ Y++ G I A LF +D W+ +I G
Sbjct: 216 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDG 275
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
+N N+AL++F+ M++ NV +E+ V ++SACS +G L+L +WV ++ +++
Sbjct: 276 LVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELS 335
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
V ALI+M ++CG+++ A ++F M +D+ SY +MI GL++HG + +A+ F M+
Sbjct: 336 N-FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV 394
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
N G P+ +L ACSHG L++ G F +MK +++ P EHY C+VDLL R G+L
Sbjct: 395 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRL 454
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIY 326
+EAY ++++P+E G LL ACK +G +ELGE +A RLFE E +S YVLLS++Y
Sbjct: 455 EEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLY 514
Query: 327 AAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A++ +W + + ++ M++ G+ K PGCS I
Sbjct: 515 ASSGKWKESTEIRESMRDSGIEKEPGCSTI 544
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 54/284 (19%)
Query: 36 KVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNE 95
K+ ++D +I + + + A +F + +L++ +I G+ +G +
Sbjct: 97 KIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSAD 156
Query: 96 ALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-AL 154
+ ++ M +V PD Y++ S++ AC DL + + + G + V +
Sbjct: 157 GVSLYHRMIHNSVLPDNYVITSVLKAC------DLKVCREIHAQVLKLGFGSSRSVGLKM 210
Query: 155 IDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
+++ K G + A K+F+EMP RD + MI S G+ ++A+ LF + I D
Sbjct: 211 MEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDV----KIKD- 265
Query: 215 AAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
T C + M+D L R+ ++ +A EL +
Sbjct: 266 -------TVC----------------------------WTAMIDGLVRNKEMNKALELFR 290
Query: 275 SMPVES-HASAWGA--LLGACKFYGEVELGE----IVANRLFEL 311
M +E+ A+ + A +L AC G +ELG V N+ EL
Sbjct: 291 EMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 334
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 79/277 (28%)
Query: 7 FVQMPERNLTSW--NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIAS 64
FV+ L+++ NA++ + GD+ AR+VF M ++DV+S+ M
Sbjct: 326 FVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM------------ 373
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
ISG A +G EA+ F+ M +P++ +V+L++ACS
Sbjct: 374 -------------------ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSH 414
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
G LD+ V + + Q ++D+ + G ++ A + E +P
Sbjct: 415 GGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP--------- 465
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-HGRLVEEG----KHYFET 239
+ PD+ +L+AC HG + E G K FE+
Sbjct: 466 -------------------------IEPDHIMLGTLLSACKIHGNM-ELGEKIAKRLFES 499
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
P Y + +L + SG+ KE+ E+ +SM
Sbjct: 500 EN------PDSGTYVLLSNLYASSGKWKESTEIRESM 530
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 101/232 (43%), Gaps = 45/232 (19%)
Query: 115 MVSLMSACSQVGNLD--LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
++S++ +C + ++ AK + + Q + VV LI + + ++D A +F
Sbjct: 78 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAF------VVFELIRVCSTLDSVDYAYDVFS 131
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS------- 225
+ +++ Y +MI G G + V L+++M++ ++PDN T +L AC
Sbjct: 132 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREI 191
Query: 226 HGRLVEEGKHYFETM-----------------KSKYSMVPSPEHYAC--MVDLLSRSGQL 266
H ++++ G ++ K + +P +H A M++ S G +
Sbjct: 192 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 251
Query: 267 KEAYELLKSMPVESHASAWGALLG----------ACKFYGEVELGEIVANRL 308
KEA EL + + ++ W A++ A + + E+++ + AN
Sbjct: 252 KEALELFQDVKIKD-TVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEF 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 18/185 (9%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGY 56
+ A+RVF M ++++ S+N M+ GL G + A F DM R + V+ +++
Sbjct: 353 NEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 412
Query: 57 AKVG--DIA-----SARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ G DI S + +F+ P+ + + ++ + G EA ++ +E + ++
Sbjct: 413 SHGGLLDIGLEVFNSMKRVFNVEPQIEH--YGCIVDLLGRVGRLEEA---YRFIENIPIE 467
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD ++ +L+SAC GN++L + + L +S T+V+ L ++ A G + +
Sbjct: 468 PDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL--LSNLYASSGKWKESTE 525
Query: 170 LFEEM 174
+ E M
Sbjct: 526 IRESM 530
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 218/356 (61%), Gaps = 1/356 (0%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+++F MPE+ SW +M+ G G + +A + F+ MP + V++ MI G+ +VG
Sbjct: 220 DVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG 279
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+I+ AR +FD RD W +I Y + G EAL +F M+ V+P ++S++S
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
C+ + +L + V +L + D +V + L+ M KCG + +A +F+ +D+
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFD-DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII 398
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
+ S+I G + HG E+A+ +F++M + G +P+ ILTACS+ +EEG FE+M
Sbjct: 399 MWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
+SK+ + P+ EHY+C VD+L R+GQ+ +A EL++SM ++ A+ WGALLGACK + ++L
Sbjct: 459 ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDL 518
Query: 301 GEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
E+ A +LFE EP+N+ YVLLSSI A+ +W DV+ V+ M+ + K PGCSWI
Sbjct: 519 AEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 151/309 (48%), Gaps = 21/309 (6%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+++F +M ERN+ SWN +V G +K ++ AR VF+ MPER+VVS+T M+ GY + G +
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
A +LF + P+R+ W+V+ G +G ++A K++ ++M VK D +++
Sbjct: 127 GEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY---DMMPVK-DVVASTNMIGGL 182
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ G +D A+ + + + ++ T +I + +D A KLFE MP++ S+
Sbjct: 183 CREGRVDEARLIFDEMRERNVVTWTT-----MITGYRQNNRVDVARKLFEVMPEKTEVSW 237
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
SM+ G ++ G E A F M + +I NA ++ + + + F+ M+
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA----MIVGFGEVGEISKARRVFDLMED 293
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL---LGACKFYGEVE 299
+ + + M+ R G EA +L M + ++ +L L C ++
Sbjct: 294 RDNAT-----WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
Query: 300 LGEIVANRL 308
G V L
Sbjct: 349 YGRQVHAHL 357
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 164/350 (46%), Gaps = 57/350 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A++ F + + + SWN++V G G AR++FD+M ER+VVS+ ++ GY K
Sbjct: 34 NEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNR 93
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
I AR +F+ P+R+ W+ ++ GY Q G+ EA +F M N
Sbjct: 94 MIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN------------- 140
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
++ T + LID G +D+A KL++ MP +D+
Sbjct: 141 -----------------------EVSWTVMFGGLID----DGRIDKARKLYDMMPVKDVV 173
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
+ +MI GL G ++A +F++M ++ +T ++T V+ + FE M
Sbjct: 174 ASTNMIGGLCREGRVDEARLIFDEMRERNVV----TWTTMITGYRQNNRVDVARKLFEVM 229
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
K + + M+ + SG++++A E + MP++ + ++G +GEV
Sbjct: 230 PEKTEV-----SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG----FGEV-- 278
Query: 301 GEIV-ANRLFEL-EPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
GEI A R+F+L E +++ + + Y L+ + +M+++G+R
Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 40/225 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A++++ MP +++ + M+GGL + G + AR +FD+M ER+VV++T MI GY +
Sbjct: 158 DKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNN 217
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+ AR LF+ P++ W+ ++ GY +G +A + F E+M +KP +
Sbjct: 218 RVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF---EVMPMKP--------VI 266
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
AC+ A+I + G + +A ++F+ M RD
Sbjct: 267 ACN-----------------------------AMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
++ MI+ G+ +A+ LF +M +G+ P + IL+ C+
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 284 bits (727), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/349 (40%), Positives = 214/349 (61%), Gaps = 4/349 (1%)
Query: 8 VQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARA 67
V+M LT+ M G G + AR+ F M R++ T M+ GY+K G + A+
Sbjct: 243 VRMDTHLLTALVTMYAG---AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQV 299
Query: 68 LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
+FD+ K+D W+ +IS Y ++ P EAL++F+ M +KPD M S++SAC+ +G
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQ 187
LD AKWV + + ++ + + ALI+M AKCG +D +FE+MP+R++ S+ SMI
Sbjct: 360 LDKAKWVHSCIHVNGLE-SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 418
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMV 247
LS+HG A A+ LF +M E + P+ F +L CSH LVEEGK F +M +Y++
Sbjct: 419 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR 307
P EHY CMVDL R+ L+EA E+++SMPV S+ WG+L+ AC+ +GE+ELG+ A R
Sbjct: 479 PKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKR 538
Query: 308 LFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ ELEP++ VL+S+IYA +W DV +++ M+E+ + K G S I
Sbjct: 539 ILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 142/284 (50%), Gaps = 44/284 (15%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +D YA G I AR +FD+ RD W+ +I Y + GL +EA K+F+ M+ NV
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA---------- 159
PDE I+ +++SAC + GN+ + + +L ++ + + TH++ AL+ M A
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM-DTHLLTALVTMYAGAGCMDMARE 268
Query: 160 ---------------------KCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
KCG +D A +F++ K+DL + +MI Y ++A
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--H---YFETMKSKYSMVPSPEHY 253
+ +F +M G+ PD + +++AC++ ++++ K H + ++S+ S+ +
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA---- 384
Query: 254 ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++++ ++ G L ++ + MP + +W +++ A +GE
Sbjct: 385 --LINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGE 425
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
D + VF +MP RN+ SW++M+ L G+ +A +F M + +V V+F ++ G
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 57 AKVGDIASARALF-------DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ G + + +F + PK + + ++ + + L EAL++ +E M V
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHY--GCMVDLFGRANLLREALEV---IESMPVA 510
Query: 110 PDEYIMVSLMSACSQVGNLDLAKW 133
+ I SLMSAC G L+L K+
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKF 534
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 76 DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD 135
++ +++ + +++ P + +Q + + + D++ + ++ A S+V L +
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSAL----FEG 130
Query: 136 CYLSQSSIDIGQT---HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
L + I V +DM A CG ++ A +F+EM RD+ ++ +MI+
Sbjct: 131 MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
G ++A LF +M + ++PD I++AC
Sbjct: 191 GLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 220/362 (60%), Gaps = 7/362 (1%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ A+ +F M E+N SWNAM+ G ++ GDL A F P R VV++T MI GY K
Sbjct: 86 EKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAK 145
Query: 61 DIASARALF-DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
+ A A+F D ++ W+ +ISGY +N P + LK+F+ M ++P+ + S +
Sbjct: 146 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 205
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
CS++ L L + + +S+S++ + +LI M KCG + A KLFE M K+D+
Sbjct: 206 LGCSELSALQLGRQIHQIVSKSTL-CNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 264
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
++ +MI G + HG A++A+ LF +M++ + PD F +L AC+H LV G YFE+
Sbjct: 265 VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFES 324
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
M Y + P P+HY CMVDLL R+G+L+EA +L++SMP HA+ +G LLGAC+ + VE
Sbjct: 325 MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVE 384
Query: 300 LGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL-----RKLPGCS 354
L E A +L +L +N++ YV L++IYA+ ++W DV+ V+ +MKE + K+PG S
Sbjct: 385 LAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYS 444
Query: 355 WI 356
WI
Sbjct: 445 WI 446
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 151/294 (51%), Gaps = 17/294 (5%)
Query: 10 MPERNLTSWNAMVGGLVKG-GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARAL 68
M +N +WN+++ G+ K ++ A ++FD++PE D S+ +M+ Y + + A++
Sbjct: 1 MRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSF 60
Query: 69 FDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
FD+ P +DA W+ +I+GYA+ G +A ++F M ++ +E +++S + G+L
Sbjct: 61 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDL 116
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSM 185
+ A + + + G VVA A+I K ++ A +F++M ++L ++ +M
Sbjct: 117 EKAS----HFFKVAPVRG---VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 169
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYS 245
I G + E + LF ML EG+ P+++ + L CS ++ G+ + + SK +
Sbjct: 170 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV-SKST 228
Query: 246 MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
+ ++ + + G+L +A++L + M + AW A++ +G +
Sbjct: 229 LCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNAD 281
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/322 (43%), Positives = 210/322 (65%), Gaps = 3/322 (0%)
Query: 37 VFDDMPERD--VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPN 94
V D +RD +V + VMIDGY ++GD +AR LFDK +R W+ +ISGY+ NG
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 95 EALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAAL 154
+A+++F+ M+ +++P+ +VS++ A S++G+L+L +W+ Y S I I + +AL
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSAL 315
Query: 155 IDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
IDM +KCG +++A +FE +P+ ++ ++ +MI G +IHG A A+ F KM G+ P +
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 215 AAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
A+ +LTACSHG LVEEG+ YF M S + P EHY CMVDLL RSG L EA E +
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 275 SMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLD 334
+MP++ W ALLGAC+ G VE+G+ VAN L ++ P +S YV LS++YA+ W +
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 335 VSHVKNKMKERGLRKLPGCSWI 356
VS ++ +MKE+ +RK PGCS I
Sbjct: 496 VSEMRLRMKEKDIRKDPGCSLI 517
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 48/263 (18%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV---------------- 46
A+ +F +M +R++ SWN M+ G G +A +VF +M + D+
Sbjct: 227 ARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISR 286
Query: 47 -----------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
V + +ID Y+K G I A +F++ P+ + WS +
Sbjct: 287 LGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAM 346
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ-SS 142
I+G+A +G +A+ F M V+P + ++L++ACS G ++ + Y SQ S
Sbjct: 347 INGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRR---YFSQMVS 403
Query: 143 IDIGQTHV--VAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAV 199
+D + + ++D+ + G +D A + MP K D + +++ + G E
Sbjct: 404 VDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGK 463
Query: 200 GLFNKMLNEGLIPDNAAFTVILT 222
+ N +++ ++P ++ V L+
Sbjct: 464 RVANILMD--MVPHDSGAYVALS 484
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 134/315 (42%), Gaps = 53/315 (16%)
Query: 31 LINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
I + ++ D + +++ F D + + D+ A +F++ P+R+ F W+ +I G++++
Sbjct: 46 FIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFSWNTIIRGFSES 103
Query: 91 GLPNEALKIFQGMELMN---VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ 147
+ I E+M+ V+P+ + S++ AC++ G + K + + G
Sbjct: 104 DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG-GD 162
Query: 148 THVVAALIDMNAKCGNM--------------------DR--------------------- 166
V++ L+ M CG M DR
Sbjct: 163 EFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLG 222
Query: 167 ----ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
A LF++M +R + S+ +MI G S++G+ + AV +F +M + P+ +L
Sbjct: 223 DCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLP 282
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
A S +E G+ + + + ++D+ S+ G +++A + + +P E+
Sbjct: 283 AISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN-V 340
Query: 283 SAWGALLGACKFYGE 297
W A++ +G+
Sbjct: 341 ITWSAMINGFAIHGQ 355
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 281 bits (719), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 222/345 (64%), Gaps = 1/345 (0%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E +L NA+V G++ A ++F M RDV+S+T ++ GY + G++ AR FD+
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
P RD W+++I GY + G NE+L+IF+ M+ + PDE+ MVS+++AC+ +G+L++
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+W+ Y+ ++ I V ALIDM KCG ++A K+F +M +RD F++ +M+ GL+
Sbjct: 388 EWIKTYIDKNKIK-NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLAN 446
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
+G ++A+ +F +M + + PD+ + +L+AC+H +V++ + +F M+S + + PS
Sbjct: 447 NGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLV 506
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL 311
HY CMVD+L R+G +KEAYE+L+ MP+ ++ WGALLGA + + + + E+ A ++ EL
Sbjct: 507 HYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL 566
Query: 312 EPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
EP+N + Y LL +IYA +W D+ V+ K+ + ++K PG S I
Sbjct: 567 EPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 157/361 (43%), Gaps = 80/361 (22%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV----SFTVMIDG--- 55
A ++FV++PE ++ WN M+ G K +++ +M + V +F +++G
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 56 ---------------------------------YAKVGDIASARALFDKAPKRDAFLWSV 82
Y+ G + AR +FD+ K D F W++
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGY + E++++ ME V P ++ ++SACS+V + DL K V Y+S+
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG-------------- 188
+ + AL++ A CG MD A ++F M RD+ S+ S+++G
Sbjct: 267 TE-PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 189 ------------LSIHGYAE-----QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ I GY +++ +F +M + G+IPD +LTAC+H +E
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 232 EG---KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
G K Y + K K +V ++D+ + G ++A ++ M + W A+
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVG----NALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAM 440
Query: 289 L 289
+
Sbjct: 441 V 441
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 9/251 (3%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
G ++ A LF K P+ D +W+ +I G+++ E ++++ M V PD + L+
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 120 SACSQVGN-LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD 178
+ + G L K + C++ + + +V AL+ M + CG MD A +F+ K D
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLG-SNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+FS+ MI G + E+++ L +M + P + ++L+ACS + + K E
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
+ S+ PS +V+ + G++ A + +SM S W +++ G V
Sbjct: 261 YV-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS-WTSIVK-----GYV 313
Query: 299 ELGEIVANRLF 309
E G + R +
Sbjct: 314 ERGNLKLARTY 324
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 213/326 (65%), Gaps = 1/326 (0%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G L + KVF+ +P D V T M+ A+ GD+ AR LF+ P+RD W+ +ISGYA
Sbjct: 157 GCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYA 216
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
Q G EAL +F M+L VK + M+S++SAC+Q+G LD +W Y+ ++ I I
Sbjct: 217 QVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI-TV 275
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+ L+D+ AKCG+M++A ++F M +++++++ S + GL+++G+ E+ + LF+ M +
Sbjct: 276 RLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQD 335
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G+ P+ F +L CS V+EG+ +F++M++++ + P EHY C+VDL +R+G+L++
Sbjct: 336 GVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLED 395
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAA 328
A +++ MP++ HA+ W +LL A + Y +ELG + + ++ ELE N YVLLS+IYA
Sbjct: 396 AVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYAD 455
Query: 329 ADQWLDVSHVKNKMKERGLRKLPGCS 354
++ W +VSHV+ MK +G+RK PGCS
Sbjct: 456 SNDWDNVSHVRQSMKSKGVRKQPGCS 481
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 42/268 (15%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSAC 122
A + D++ K F + +I + ++ +P ++ ++ + ++KPD Y + L+ AC
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL------------ 170
+ + + V + D HV LI + A+ G +D +K+
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFD-NDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCR 177
Query: 171 -------------------FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
FE MP+RD ++ +MI G + G + +A+ +F+ M EG+
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK 237
Query: 212 PDNAAFTVILTACSHGRLVEEGK---HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
+ A +L+AC+ +++G+ Y E K K ++ + +VDL ++ G +++
Sbjct: 238 VNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLA----TTLVDLYAKCGDMEK 293
Query: 269 AYELLKSMPVESHASAWGALLGACKFYG 296
A E+ M E + W + L G
Sbjct: 294 AMEVFWGME-EKNVYTWSSALNGLAMNG 320
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 229/355 (64%), Gaps = 4/355 (1%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIAS 64
R V E ++ NA+V K G L AR VFD M +++V +T M+ GY G I
Sbjct: 172 RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDE 231
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
AR LF+++P +D LW+ +++GY Q +EAL++F+ M+ ++PD +++VSL++ C+Q
Sbjct: 232 ARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQ 291
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
G L+ KW+ Y++++ + + + V AL+DM AKCG ++ A ++F E+ +RD S+ S
Sbjct: 292 TGALEQGKWIHGYINENRVTVDKV-VGTALVDMYAKCGCIETALEVFYEIKERDTASWTS 350
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
+I GL+++G + +A+ L+ +M N G+ D F +LTAC+HG V EG+ F +M ++
Sbjct: 351 LIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERH 410
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS---AWGALLGACKFYGEVELG 301
++ P EH +C++DLL R+G L EA EL+ M ES + + +LL A + YG V++
Sbjct: 411 NVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIA 470
Query: 302 EIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
E VA +L ++E +SS + LL+S+YA+A++W DV++V+ KMK+ G+RK PGCS I
Sbjct: 471 ERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSI 525
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 129/269 (47%), Gaps = 42/269 (15%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYI 114
YA +G I +FD+ P+RD W+ LIS Y NG +A+ +F+ M + N+K DE
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLS---QSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+VS +SACS + NL++ + + ++ + S+ IG AL+DM KCG +D+A +F
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN-----ALVDMFCKCGCLDKARAVF 205
Query: 172 EEMPKRDLFSYCSMIQGLS--------------------------IHGYAE-----QAVG 200
+ M +++ + SM+ G ++GY + +A+
Sbjct: 206 DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF M G+ PDN +LT C+ +E+GK + V A +VD+
Sbjct: 266 LFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-LVDMY 324
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALL 289
++ G ++ A E+ + E ++W +L+
Sbjct: 325 AKCGCIETALEVFYEIK-ERDTASWTSLI 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 114/238 (47%), Gaps = 11/238 (4%)
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
+++ ++ A + L +F + + PD + + ++ + ++ + + V Y
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
++ ++ ++V +L+ M A G ++ +K+F+EMP+RD+ S+ +I +G E
Sbjct: 72 AVKAGLEF-DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 198 AVGLFNKMLNEG-LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
A+G+F +M E L D L+ACS + +E G+ + + +++ M S +
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNAL 188
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR-LFELEP 313
VD+ + G L +A + SM + + W +++ +G V G I R LFE P
Sbjct: 189 VDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMV-----FGYVSTGRIDEARVLFERSP 240
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 220/356 (61%), Gaps = 2/356 (0%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D+A+++F MPE+ SW +M+ G V+ G + +A ++F+ MP + V++ MI G + G
Sbjct: 220 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 279
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+IA AR +FD +R+ W +I + +NG EAL +F M+ V+P ++S++S
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
C+ + +L K V L + D+ +V + L+ M KCG + ++ +F+ P +D+
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDV-DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+ S+I G + HG E+A+ +F +M L+ P+ F L+ACS+ +VEEG +E+
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES 458
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
M+S + + P HYACMVD+L R+G+ EA E++ SM VE A+ WG+LLGAC+ + +++
Sbjct: 459 MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
Query: 300 LGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSW 355
+ E A +L E+EPENS Y+LLS++YA+ +W DV+ ++ MK R +RK PGCSW
Sbjct: 519 VAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSW 574
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 145/272 (53%), Gaps = 18/272 (6%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A+++F +MP+RN+ SWN +V G +K G++ ARKVFD MPER+VVS+T ++ GY G
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ A +LF K P+++ W+V++ G+ Q+G ++A K+++ M D S++
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYE----MIPDKDNIARTSMIHG 181
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
+ G +D A+ + +S+ S+ T V + +D A K+F+ MP++ S
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGY-----GQNNRVDDARKIFDVMPEKTEVS 236
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ SM+ G +G E A LF M + +I NA +++ + + + F++MK
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNA----MISGLGQKGEIAKARRVFDSMK 292
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+ + + ++ + R+G EA +L
Sbjct: 293 ER-----NDASWQTVIKIHERNGFELEALDLF 319
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 146/292 (50%), Gaps = 29/292 (9%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+++F ++++SWN+MV G +ARK+FD+MP+R+++S+ ++ GY K G+I
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEI 95
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
AR +FD P+R+ W+ L+ GY NG + A +F M N +++ +
Sbjct: 96 DEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL--- 152
Query: 123 SQVGNLDLAKWVDCYLSQSSID---IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
Q G +D A C L + D I +T ++ L K G +D A ++F+EM +R +
Sbjct: 153 -QDGRIDDA----CKLYEMIPDKDNIARTSMIHGL----CKEGRVDEAREIFDEMSERSV 203
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
++ +M+ G + + A +F+ M + + ++T +L +E+ + FE
Sbjct: 204 ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV----SWTSMLMGYVQNGRIEDAEELFEV 259
Query: 240 MKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
M P AC M+ L + G++ +A + SM E + ++W ++
Sbjct: 260 M-------PVKPVIACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI 303
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 55/341 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+ +F +MPE+N SW M+ G ++ G + +A K+++ +P++D ++ T MI G K G
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+ AR +FD+ +R W+ +++GY QN ++A KIF M + E S++
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLM 242
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA------KCGNMDRANKLFEEM 174
Q G ++ A+ ++ + V +I NA + G + +A ++F+ M
Sbjct: 243 GYVQNGRIEDAE-----------ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSM 291
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
+R+ S+ ++I+ +G+ +A+ LF M +G+ P IL+ C+ + GK
Sbjct: 292 KERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351
Query: 235 HYF--------------------------ETMKSK--YSMVPSPE--HYACMVDLLSRSG 264
E +KSK + PS + + ++ + G
Sbjct: 352 QVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHG 411
Query: 265 QLKEAYELLKSMPVESHAS----AWGALLGACKFYGEVELG 301
+EA ++ MP+ + A L AC + G VE G
Sbjct: 412 LGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 156/331 (47%), Gaps = 24/331 (7%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N + L + G + ARK+FD + + S+ M+ GY AR LFD+ P R+
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ L+SGY +NG +EA K+F M NV +L+ G +D+A+ + +
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVS----WTALVKGYVHNGKVDVAESLFWKM 136
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ + ++ L D G +D A KL+E +P +D + SMI GL G ++A
Sbjct: 137 PEKNKVSWTVMLIGFLQD-----GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+F++M +I +T ++T V++ + F+ M K + + M+
Sbjct: 192 REIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKIFDVMPEKTEV-----SWTSMLM 242
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE-LEPENSS 317
++G++++A EL + MPV+ A A++ GE+ A R+F+ ++ N +
Sbjct: 243 GYVQNGRIEDAEELFEVMPVKP-VIACNAMISGLGQKGEIA----KARRVFDSMKERNDA 297
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
+ + I+ L+ + M+++G+R
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVR 328
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 220/338 (65%), Gaps = 1/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N++V G + A ++F M RDVVS+T M+ GY K G + +AR +FD+ P R+ F
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF 215
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
WS++I+GYA+N +A+ +F+ M+ V +E +MVS++S+C+ +G L+ + Y+
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV 275
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+S + + + AL+DM +CG++++A +FE +P+ D S+ S+I+GL++HG+A +A
Sbjct: 276 VKSHMTVNLI-LGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ F++M++ G IP + FT +L+ACSHG LVE+G +E MK + + P EHY C+VD
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+L R+G+L EA + M V+ +A GALLGACK Y E+ E V N L +++PE+S
Sbjct: 395 MLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLLS+IYA A QW + +++ MKE+ ++K PG S I
Sbjct: 455 YVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ A +F + + F++++LI ++ P++A + M + PD L+ A
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
S++ + + + + + +V +L+ M A CG + A ++F +M RD+ S
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQ-NDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 182 YCSMIQG--------------------------LSIHGYA-----EQAVGLFNKMLNEGL 210
+ SM+ G + I+GYA E+A+ LF M EG+
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
+ + ++++C+H +E G+ +E + K M + +VD+ R G +++A
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYV-VKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 271 ELLKSMPVESHASAWGALLGACKFYGE 297
+ + +P E+ + +W +++ +G
Sbjct: 305 HVFEGLP-ETDSLSWSSIIKGLAVHGH 330
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 217/340 (63%), Gaps = 3/340 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
++ K G L AR+VFD+M +RDV + MI GY + GD+ +A LFD P+++
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ +ISG++QNG +EALK+F ME +VKP+ +VS++ AC+ +G L++ + ++ Y
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM-PKRDLFSYCSMIQGLSIHGYAE 196
++ +V A I+M +KCG +D A +LFEE+ +R+L S+ SMI L+ HG +
Sbjct: 241 ARENGF-FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
+A+ LF +ML EG PD F +L AC HG +V +G+ F++M+ + + P EHY CM
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
+DLL R G+L+EAY+L+K+MP++ A WG LLGAC F+G VE+ EI + LF+LEP N
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
V++S+IYAA ++W V ++ MK+ + K G S+
Sbjct: 420 GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYF 459
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 139/311 (44%), Gaps = 49/311 (15%)
Query: 59 VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP-------- 110
+ ++ AR LFD FL++ LI Y + P+E++ ++ + ++P
Sbjct: 29 IPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFI 88
Query: 111 ---------------------------DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
D + +L++A +++G L A+ V +S+ +
Sbjct: 89 FAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDV 148
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ A+I + G+M A +LF+ MP++++ S+ ++I G S +G +A+ +F
Sbjct: 149 PVWN-----AMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFL 203
Query: 204 KM-LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC--MVDLL 260
M ++ + P++ +L AC++ +E G+ E + + Y C +++
Sbjct: 204 CMEKDKSVKPNHITVVSVLPACANLGELEIGRR-LEGYARENGFFDNI--YVCNATIEMY 260
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV-ELGEIVANRLFELEPENSSPY 319
S+ G + A L + + + + +W +++G+ +G+ E + A L E E ++ +
Sbjct: 261 SKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTF 320
Query: 320 V--LLSSIYAA 328
V LL+ ++
Sbjct: 321 VGLLLACVHGG 331
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 274 bits (700), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 218/346 (63%), Gaps = 1/346 (0%)
Query: 11 PERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFD 70
P ++ + NA++ +K DL++A KVFD+M ERDV+S+ ++ GYA++G + A+ LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 71 KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
+ W+ +ISGY G EA+ F+ M+L ++PDE ++S++ +C+Q+G+L+L
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
KW+ Y + + QT V ALI+M +KCG + +A +LF +M +D+ S+ +MI G +
Sbjct: 260 GKWIHLYAERRGF-LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSP 250
HG A A+ FN+M + P+ F +L+ACSH + +EG YF+ M+ Y + P
Sbjct: 319 YHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKI 378
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
EHY C++D+L+R+G+L+ A E+ K+MP++ + WG+LL +C+ G +++ + + L E
Sbjct: 379 EHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
Query: 311 LEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LEPE+ YVLL++IYA +W DVS ++ ++ ++K PG S I
Sbjct: 439 LEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 136/299 (45%), Gaps = 40/299 (13%)
Query: 32 INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG 91
INA + + + + T M+D K+ D+ A LF++ + FL++ +I Y N
Sbjct: 29 INASIIIHGLSQSSFM-VTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 92 LPNEALKIFQGMELMNVK-PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
L + ++I++ + + + PD + + +C+ +G+ L K V +L + + HV
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG---PRFHV 144
Query: 151 VA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
V ALIDM K ++ A+K+F+EM +RD+ S+ S++ G + G ++A GLF+ ML++
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 209 -------------------------------GLIPDNAAFTVILTACSHGRLVEEGKHYF 237
G+ PD + +L +C+ +E GK +
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK-WI 263
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
+ + ++++ S+ G + +A +L M + S W ++ ++G
Sbjct: 264 HLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS-WSTMISGYAYHG 321
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 274 bits (700), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 222/355 (62%), Gaps = 2/355 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A++VF +MPER+ +W MV + D+ +A + + M E++ + +I+GY +G++
Sbjct: 178 ARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNL 237
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
A +LF++ P +D W+ +I GY+QN EA+ +F M + PDE M +++SAC
Sbjct: 238 EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC 297
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ +G L++ K V Y Q+ + ++ +AL+DM +KCG+++RA +F +PK++LF +
Sbjct: 298 AHLGVLEIGKEVHMYTLQNGF-VLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCW 356
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
S+I+GL+ HG+A++A+ +F KM E + P+ F + TAC+H LV+EG+ + +M
Sbjct: 357 NSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMID 416
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
YS+V + EHY MV L S++G + EA EL+ +M E +A WGALL C+ + + + E
Sbjct: 417 DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAE 476
Query: 303 IVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKL-PGCSWI 356
I N+L LEP NS Y LL S+YA ++W DV+ ++ +M+E G+ K+ PG S I
Sbjct: 477 IAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 531
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 271 bits (694), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 219/359 (61%), Gaps = 7/359 (1%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A +F + + +W++M G K G + A ++FD+MP +D V++ VMI G K ++
Sbjct: 166 ASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEM 225
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
SAR LFD+ ++D W+ +ISGY G P EAL IF+ M PD ++SL+SAC
Sbjct: 226 DSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 123 SQVGNLDLAKWVDCYLSQ-----SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
+ +G+L+ K + Y+ + SSI +G T + ALIDM AKCG++DRA ++F + R
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVG-TPIWNALIDMYAKCGSIDRAIEVFRGVKDR 344
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF 237
DL ++ ++I GL++H +AE ++ +F +M + P+ F ++ ACSH V+EG+ YF
Sbjct: 345 DLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
M+ Y++ P+ +HY CMVD+L R+GQL+EA+ ++SM +E +A W LLGACK YG
Sbjct: 404 SLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGN 463
Query: 298 VELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
VELG+ +L + + S YVLLS+IYA+ QW V V+ + ++K G S I
Sbjct: 464 VELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 13/264 (4%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
G + A LFD+ PK D + + ++ G AQ+ P + + ++ ME V PD Y ++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
ACS++ + + + + +V ALI +A CG++ A++LF++ K
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNE-YVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
++ SM G + G ++A+ LF++M + D A+ V++T C + ++ + F+
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDR 234
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM-PVESHASAWG--ALLGACKFYG 296
K + + M+ G KEA + K M H +LL AC G
Sbjct: 235 FTEKDVVT-----WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 297 EVELGEIVANRLFELEPENSSPYV 320
++E G+ + + E +SS YV
Sbjct: 290 DLETGKRLHIYILETASVSSSIYV 313
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 271 bits (692), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 225/396 (56%), Gaps = 41/396 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFT------ 50
D+AK VF +M +R++ S+ +M+ G + G A K+F++M E DV + T
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 51 -----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D YAK G + A +F + +D W+
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWN 467
Query: 82 VLISGYAQNGLPNEALKIFQ-GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+I GY++N NEAL +F +E PDE + ++ AC+ + D + + Y+ +
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ HV +L+DM AKCG + A+ LF+++ +DL S+ MI G +HG+ ++A+
Sbjct: 528 NGY-FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LFN+M G+ D +F +L ACSH LV+EG +F M+ + + P+ EHYAC+VD+L
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
+R+G L +AY +++MP+ A+ WGALL C+ + +V+L E VA ++FELEPEN+ YV
Sbjct: 647 ARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYV 706
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L+++IYA A++W V ++ ++ +RGLRK PGCSWI
Sbjct: 707 LMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 10/269 (3%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
V GG+ ++ + ER+ V + ++ Y K + SAR +FD+ +RD W+ +I+
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNS-LVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GY NGL + L +F M + ++ D +VS+ + C+ + L + V ++
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS- 328
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
+ L+DM +KCG++D A +F EM R + SY SMI G + G A +AV LF +M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK---YSMVPSPEHYACMVDLLSR 262
EG+ PD T +L C+ RL++EGK E +K + + S ++D+ ++
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN----ALMDMYAK 444
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGA 291
G ++EA + M V+ S W ++G
Sbjct: 445 CGSMQEAELVFSEMRVKDIIS-WNTIIGG 472
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 10/267 (3%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y GD+ A +FD+ A W++L++ A++G + ++ +F+ M V+ D Y
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEM 174
+ + S + ++ + + ++ +S G+ + V +L+ K +D A K+F+EM
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSG--FGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
+RD+ S+ S+I G +G AE+ + +F +ML G+ D A + C+ RL+ G+
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
++ K ++D+ S+ G L A + + M S S + G +
Sbjct: 317 A-VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR- 374
Query: 295 YGEVELGEIVANRLF-ELEPENSSPYV 320
E GE V +LF E+E E SP V
Sbjct: 375 --EGLAGEAV--KLFEEMEEEGISPDV 397
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/350 (38%), Positives = 219/350 (62%), Gaps = 3/350 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A++V +MP R+ SWN+++ ++ G + AR +FD+M ER+V S+ MI GYA G +
Sbjct: 194 ARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLV 253
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSA 121
A+ +FD P RD W+ +++ YA G NE L++F M + KPD + +VS++SA
Sbjct: 254 KEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSA 313
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C+ +G+L +WV Y+ + I+I + + AL+DM +KCG +D+A ++F KRD+ +
Sbjct: 314 CASLGSLSQGEWVHVYIDKHGIEI-EGFLATALVDMYSKCGKIDKALEVFRATSKRDVST 372
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ S+I LS+HG + A+ +F++M+ EG P+ F +L+AC+H ++++ + FE M
Sbjct: 373 WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMS 432
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
S Y + P+ EHY CMVDLL R G+++EA EL+ +P + + +LLGACK +G++E
Sbjct: 433 SVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQA 492
Query: 302 EIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMK-ERGLRKL 350
E +ANRL EL +SS Y +S++YA+ +W V + M+ ER R L
Sbjct: 493 ERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 14/247 (5%)
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
++ A ++ ++ + F + +I YA + P AL +F+ M L V PD+Y ++ A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C+ + + + +S + + V L+++ + G + A K+ + MP RD S
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGL-VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ S++ G ++A LF++M + ++ +++ + LV+E K F++M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNV----ESWNFMISGYAAAGLVKEAKEVFDSMP 264
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG----ALLGACKFYGE 297
V + MV + G E E+ M +S G ++L AC G
Sbjct: 265 -----VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 298 VELGEIV 304
+ GE V
Sbjct: 320 LSQGEWV 326
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 7/196 (3%)
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
+ A N + + A+ + + + F++ S+I+ + E A+ +F +ML +
Sbjct: 77 LVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPV 136
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
PD +FT +L AC+ EEG+ + K +V +V++ RSG + A
Sbjct: 137 FPDKYSFTFVLKACAAFCGFEEGRQ-IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIAR 195
Query: 271 ELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF-ELEPENSSPYVLLSSIYAAA 329
++L MPV A +W +LL A G V+ A LF E+E N + + S YAAA
Sbjct: 196 KVLDRMPVRD-AVSWNSLLSAYLEKGLVD----EARALFDEMEERNVESWNFMISGYAAA 250
Query: 330 DQWLDVSHVKNKMKER 345
+ V + M R
Sbjct: 251 GLVKEAKEVFDSMPVR 266
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 226/396 (57%), Gaps = 43/396 (10%)
Query: 2 NAKRVF--VQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV-----------S 48
+A+ VF + +PER + SW A+V + G+ + A ++F M + DV +
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 49 FTVMID----------------------------GYAKVGDIASARALFDKAPKRDAFLW 80
FT + D YAK G +A+A+ LFDK + LW
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISGYA+NG EA+ +F M +V+PD + S +SAC+QVG+L+ A+ + Y+ +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S + +ALIDM AKCG+++ A +F+ RD+ + +MI G +HG A +A+
Sbjct: 352 SDYR-DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
L+ M G+ P++ F +L AC+H +V EG +F M + + + P +HYAC++DLL
Sbjct: 411 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLL 469
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R+G L +AYE++K MPV+ + WGALL ACK + VELGE A +LF ++P N+ YV
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS++YAAA W V+ V+ +MKE+GL K GCSW+
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 162/340 (47%), Gaps = 52/340 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------------------- 42
A++VF +P + WNA++ G + +A ++ +M
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 43 -------------------ERDVVSFTVMIDGYAKVGDIASARALFD--KAPKRDAFLWS 81
+ DV +I YAK + SAR +F+ P+R W+
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
++S YAQNG P EAL+IF M M+VKPD +VS+++A + + +L + + + +
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++I + ++ +L M AKCG + A LF++M +L + +MI G + +GYA +A+ +
Sbjct: 252 GLEI-EPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM-KSKYS---MVPSPEHYACMV 257
F++M+N+ + PD + T ++AC+ +E+ + +E + +S Y + S ++
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA-----LI 365
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
D+ ++ G + E L+ ++ W A++ +G
Sbjct: 366 DMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 49 FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
T +I + GDI AR +FD P+ F W+ +I GY++N +AL ++ M+L V
Sbjct: 56 ITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARV 115
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
PD + L+ ACS + +L + ++V + + D V LI + AKC + A
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFD-ADVFVQNGLIALYAKCRRLGSAR 174
Query: 169 KLFE--EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
+FE +P+R + S+ +++ + +G +A+ +F++M + PD A +L A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 227 GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ +++G+ ++ K + P+ + + ++ GQ+ A L M
Sbjct: 235 LQDLKQGRSIHASV-VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 200/343 (58%), Gaps = 5/343 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA V K + AR +FD MP R+V++ T MI GYA +AR +F K +R+
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ LI+GY QNG EAL +F ++ +V P Y +++ AC+ + L L ++
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 139 SQSSIDI-----GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ V +LIDM KCG ++ +F +M +RD S+ +MI G + +G
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY 253
Y +A+ LF +ML G PD+ +L+AC H VEEG+HYF +M + + P +HY
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 254 ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEP 313
CMVDLL R+G L+EA +++ MP++ + WG+LL ACK + + LG+ VA +L E+EP
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Query: 314 ENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
NS PYVLLS++YA +W DV +V+ M++ G+ K PGCSWI
Sbjct: 593 SNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 145/273 (53%), Gaps = 23/273 (8%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ K G L + R+VFD MP+R++ ++ ++ G K+G + A +LF P+RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ ++SG+AQ+ EAL F M +EY S++SACS + +++ V +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++S + ++ +AL+DM +KCGN++ A ++F+EM R++ S+ S+I +G A +A
Sbjct: 179 AKSPF-LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMV 247
+ +F ML + PD +++AC+ HGR+V+ K + + S
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN---- 293
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
VD+ ++ ++KEA + SMP+ +
Sbjct: 294 -------AFVDMYAKCSRIKEARFIFDSMPIRN 319
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 54/269 (20%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGD---------LINARKV---------------- 37
A+ +F +M ERN+ SWNA++ G + G+ L+ V
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 398
Query: 38 --------------------FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
F E D+ +ID Y K G + +F K +RD
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ +I G+AQNG NEAL++F+ M KPD M+ ++SAC G ++ + Y
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH---Y 515
Query: 138 LSQSSIDIGQTHV---VAALIDMNAKCGNMDRANKLFEEMPKR-DLFSYCSMIQGLSIHG 193
S + D G + ++D+ + G ++ A + EEMP + D + S++ +H
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 575
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ K+L + P N+ V+L+
Sbjct: 576 NITLGKYVAEKLLE--VEPSNSGPYVLLS 602
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 268 bits (684), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 230/342 (67%), Gaps = 7/342 (2%)
Query: 21 MVGGLVK----GGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP--K 74
+V GL++ G L +ARK+FD+M +DV + ++ GY KVG++ AR+L + P
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
R+ W+ +ISGYA++G +EA+++FQ M + NV+PDE +++++SAC+ +G+L+L + +
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
Y+ ++ + + A+IDM AK GN+ +A +FE + +R++ ++ ++I GL+ HG+
Sbjct: 273 CSYVDHRGMNRAVS-LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
+A+ +FN+M+ G+ P++ F IL+ACSH V+ GK F +M+SKY + P+ EHY
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
CM+DLL R+G+L+EA E++KSMP +++A+ WG+LL A + ++ELGE + L +LEP
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN 451
Query: 315 NSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
NS Y+LL+++Y+ +W + ++N MK G++K+ G S I
Sbjct: 452 NSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSI 493
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 141/341 (41%), Gaps = 44/341 (12%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNE---ALKIF 100
RD ++ I+ + G + A ++F P + +L + +I + PN A+ ++
Sbjct: 45 RDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVY 104
Query: 101 QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAK 160
+ + + KPD + ++ +V ++ + + + D HVV LI M
Sbjct: 105 RKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD-SSVHVVTGLIQMYFS 163
Query: 161 CGNMDRANKLFEEMPKRDL---------------------------------FSYCSMIQ 187
CG + A K+F+EM +D+ S+ +I
Sbjct: 164 CGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVIS 223
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMV 247
G + G A +A+ +F +ML E + PD +L+AC+ +E G+ + + M
Sbjct: 224 GYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMN 282
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR 307
+ ++D+ ++SG + +A ++ + + E + W ++ +G + NR
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMFNR 341
Query: 308 LFE--LEPENSSPYVLLSSIYAAADQWLDVS-HVKNKMKER 345
+ + + P + + +LS+ W+D+ + N M+ +
Sbjct: 342 MVKAGVRPNDVTFIAILSACSHVG--WVDLGKRLFNSMRSK 380
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 268 bits (684), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 229/399 (57%), Gaps = 49/399 (12%)
Query: 3 AKRVFVQMPER-NLTSWNAMVGGLVKGGDLINARKVFDDM-------PERDVVSF----- 49
A +VF ++ + N+ WN ++ G + G+ I+A ++ +M P+ F
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 50 TVMIDG----------------------------YAKVGDIASARALFDKAPKRDAFLWS 81
T M D YA GD+ASA +FDK P++D W+
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+G+A+NG P EAL ++ M +KPD + +VSL+SAC+++G L L K V Y+
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM--- 248
Query: 142 SIDIGQT---HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
I +G T H L+D+ A+CG ++ A LF+EM ++ S+ S+I GL+++G+ ++A
Sbjct: 249 -IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 199 VGLFNKM-LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
+ LF M EGL+P F IL ACSH +V+EG YF M+ +Y + P EH+ CMV
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
DLL+R+GQ+K+AYE +KSMP++ + W LLGAC +G+ +L E ++ +LEP +S
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLLS++YA+ +W DV ++ +M G++K+PG S +
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 466
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 267 bits (683), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 199/305 (65%), Gaps = 8/305 (2%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
YA GD+ASA +FDK P++D W+ +I+G+A+NG P EAL ++ M +KPD + +
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT---HVVAALIDMNAKCGNMDRANKLFE 172
VSL+SAC+++G L L K V Y+ I +G T H L+D+ A+CG ++ A LF+
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYM----IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD 148
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACSHGRLVE 231
EM ++ S+ S+I GL+++G+ ++A+ LF M EGL+P F IL ACSH +V+
Sbjct: 149 EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
EG YF M+ +Y + P EH+ CMVDLL+R+GQ+K+AYE +KSMP++ + W LLGA
Sbjct: 209 EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 268
Query: 292 CKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLP 351
C +G+ +L E ++ +LEP +S YVLLS++YA+ +W DV ++ +M G++K+P
Sbjct: 269 CTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP 328
Query: 352 GCSWI 356
G S +
Sbjct: 329 GHSLV 333
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 124/263 (47%), Gaps = 45/263 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PE------------ 43
+A +VF +MPE++L +WN+++ G + G A ++ +M P+
Sbjct: 41 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 100
Query: 44 ---------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
R++ S V++D YA+ G + A+ LFD+ +++ W+
Sbjct: 101 KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTS 160
Query: 83 LISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQ 140
LI G A NG EA+++F+ ME + P E V ++ ACS G + ++ +
Sbjct: 161 LIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 220
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR-DLFSYCSMIQGLSIHGYAEQAV 199
I+ H ++D+ A+ G + +A + + MP + ++ + +++ ++HG ++ A
Sbjct: 221 YKIEPRIEH-FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 279
Query: 200 GLFNKMLNEGLIPDNAAFTVILT 222
F ++ L P+++ V+L+
Sbjct: 280 --FARIQILQLEPNHSGDYVLLS 300
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+V +L+ + A CG++ A K+F++MP++DL ++ S+I G + +G E+A+ L+ +M ++
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
G+ PD +L+AC+ + GK M K + + ++DL +R G+++E
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 269 AYELLKSMPVESHASAWGALL 289
A L M V+ ++ +W +L+
Sbjct: 143 AKTLFDEM-VDKNSVSWTSLI 162
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 267 bits (682), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 215/335 (64%), Gaps = 8/335 (2%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
GDL +A++VFDD +D+ ++ +++ YAK G I AR LFD+ P+R+ WS LI+GY
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 89 QNGLPNEALKIFQGMELMN-----VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
G EAL +F+ M+L V+P+E+ M +++SAC ++G L+ KWV Y+ + +
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEM-PKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+I + ALIDM AKCG+++RA ++F + K+D+ +Y +MI L+++G ++ LF
Sbjct: 231 EIDIV-LGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLF 289
Query: 203 NKML-NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
++M ++ + P++ F IL AC H L+ EGK YF+ M ++ + PS +HY CMVDL
Sbjct: 290 SEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYG 349
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
RSG +KEA + SMP+E WG+LL + G+++ E RL EL+P NS YVL
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 409
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS++YA +W++V ++++M+ +G+ K+PGCS++
Sbjct: 410 LSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYV 444
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 212/348 (60%), Gaps = 4/348 (1%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
NA +F MP ++ SWN ++GG V ++ AR FD MP+++ VS+ MI GY K+GD
Sbjct: 488 NACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGD 547
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN--VKPDEYIMVSLM 119
+ SA LF K+D ++ +I+ Y QNG P +ALK+F M N ++PDE + S++
Sbjct: 548 VQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVV 607
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
SA SQ+GN WV+ Y+++ I I + +LID+ K G+ +A K+F + K+D
Sbjct: 608 SANSQLGNTSFGTWVESYITEHGIKIDDL-LSTSLIDLYMKGGDFAKAFKMFSNLNKKDT 666
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
SY +MI G I+G A +A LF M+ + + P+ FT +L+A SH LV+EG F +
Sbjct: 667 VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNS 726
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
MK +++ PS +HY MVD+L R+G+L+EAYEL+KSMP++ +A WGALL A + VE
Sbjct: 727 MKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVE 785
Query: 300 LGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
GEI + +LE + + L+ IY++ +W D V++ +KE+ L
Sbjct: 786 FGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKL 833
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 159/338 (47%), Gaps = 26/338 (7%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
+VG + G + A+K FDD+ E++ VS+ ++ GY + G++ AR +FDK P++DA
Sbjct: 412 TGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV 471
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY- 137
W+++IS YA+ G A +F M L + P + N+ + +V+C
Sbjct: 472 SWNLIISSYAKKGDMGNACSLFSAMPLKS--PASW-------------NILIGGYVNCRE 516
Query: 138 --LSQSSID-IGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
L+++ D + Q + V+ +I K G++ A +LF M K+D Y +MI + +
Sbjct: 517 MKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 576
Query: 193 GYAEQAVGLFNKML--NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSP 250
G + A+ LF +ML N + PD + +++A S G + E+ +++ +
Sbjct: 577 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT-WVESYITEHGIKIDD 635
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
++DL + G +A+++ ++ + S + A++ C G + + E
Sbjct: 636 LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGINGMATEANSLFTAMIE 694
Query: 311 LE-PENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
+ P N + L S Y+ + + N MK+ L
Sbjct: 695 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL 732
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 211/345 (61%), Gaps = 1/345 (0%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E ++ + N+++ G+ A +FD +PE D VS+ +I GY K G + A LF K
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRK 206
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
+++A W+ +ISGY Q + EAL++F M+ +V+PD + + +SAC+Q+G L+
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
KW+ YL+++ I + + LIDM AKCG M+ A ++F+ + K+ + ++ ++I G +
Sbjct: 267 KWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
HG+ +A+ F +M G+ P+ FT +LTACS+ LVEEGK F +M+ Y++ P+ E
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL 311
HY C+VDLL R+G L EA ++ MP++ +A WGALL AC+ + +ELGE + L +
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 312 EPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+P + YV ++I+A +W + + MKE+G+ K+PGCS I
Sbjct: 446 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 135/288 (46%), Gaps = 37/288 (12%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A+ +FD + D FLW+++I G++ + P +L ++Q M + + Y SL+ ACS
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
+ + + +++ + + V +LI+ A GN A+ LF+ +P+ D S+ S
Sbjct: 128 LSAFEETTQIHAQITKLGYE-NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 185 MIQG--------------------------LSIHGYAE-----QAVGLFNKMLNEGLIPD 213
+I+G I GY + +A+ LF++M N + PD
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
N + L+AC+ +E+GK + + +K + ++D+ ++ G+++EA E+
Sbjct: 247 NVSLANALSACAQLGALEQGK-WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 274 KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
K++ +S AW AL+ ++G G ++ E++ P V+
Sbjct: 306 KNIKKKS-VQAWTALISGYAYHGH---GREAISKFMEMQKMGIKPNVI 349
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 261 bits (666), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 225/396 (56%), Gaps = 40/396 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTV--- 51
+NA+++F ++P +++ SWNAM+ G + G+ A ++F DM P+ + V
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ID Y+K G++ +A LF++ P +D W+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LI GY L EAL +FQ M P++ M+S++ AC+ +G +D+ +W+ Y+ +
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 142 SIDIGQ-THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ + + +LIDM AKCG+++ A+++F + + L S+ +MI G ++HG A+ +
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF++M G+ PD+ F +L+ACSH +++ G+H F TM Y M P EHY CM+DLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
SG KEA E++ M +E W +LL ACK +G VELGE A L ++EPEN YV
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 576
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LLS+IYA+A +W +V+ + + ++G++K+PGCS I
Sbjct: 577 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 183/314 (58%), Gaps = 15/314 (4%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
+++ V+ G L +A KVFD P RDVVS+T +I GYA G I +A+ LFD+ P +D
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK----WV 134
W+ +ISGYA+ G EAL++F+ M NV+PDE MV+++SAC+Q G+++L + W+
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
D + S++ I V ALID+ +KCG ++ A LFE +P +D+ S+ ++I G +
Sbjct: 293 DDHGFGSNLKI-----VNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEH 252
++A+ LF +ML G P++ IL AC+H ++ G+ H + + K + +
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK-GVTNASSL 406
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE-- 310
++D+ ++ G ++ A+++ S+ + S+W A++ +G + + +R+ +
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 311 LEPENSSPYVLLSS 324
++P++ + LLS+
Sbjct: 466 IQPDDITFVGLLSA 479
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 118/258 (45%), Gaps = 34/258 (13%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A ++F + + +W+ + G+A + P ALK++ M + + P+ Y ++ +C++
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
+ + ++ + D+ +V +LI M + G ++ A+K+F++ P RD+ SY +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDL-DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 185 MIQGLS--------------------------IHGYAE-----QAVGLFNKMLNEGLIPD 213
+I+G + I GYAE +A+ LF M+ + PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+ +++AC+ +E G+ + + + ++DL S+ G+L+ A L
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 274 KSMPVESHASAWGALLGA 291
+ +P + S W L+G
Sbjct: 325 ERLPYKDVIS-WNTLIGG 341
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 260 bits (665), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 137/395 (34%), Positives = 215/395 (54%), Gaps = 42/395 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV------VSFTVMIDG- 55
A+++F +MPER+L SWN+++ G G L +V M +V V+F MI
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 56 ----------------------------------YAKVGDIASARALFDKAPKRDAFLWS 81
Y K GD+ S+ LF+ ++ W+
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I + QNGL + L F + +PD+ ++++ +C +G + LA+ + +
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
G + AL+D+ +K G ++ ++ +F E+ D ++ +M+ + HG+ A+
Sbjct: 265 GFS-GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKH 323
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F M++ G+ PD+ FT +L ACSH LVEEGKHYFETM +Y + P +HY+CMVDLL
Sbjct: 324 FELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
RSG L++AY L+K MP+E + WGALLGAC+ Y + +LG A RLFELEP + YV+
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVM 443
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS+IY+A+ W D S ++N MK++GL + GCS+I
Sbjct: 444 LSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYI 478
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 15/252 (5%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV--K 109
++ Y ++G A LFD+ P+RD W+ LISGY+ G + ++ M + V +
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P+E +S++SAC G+ + + + + + + + + VV A I+ K G++ + K
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV-LEEVKVVNAFINWYGKTGDLTSSCK 190
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
LFE++ ++L S+ +MI +G AE+ + FN G PD A F +L +C +
Sbjct: 191 LFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGV 250
Query: 230 VE--EGKH---YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
V +G H F + + ++DL S+ G+L+++ + + + A
Sbjct: 251 VRLAQGIHGLIMFGGFSGNKCITTA------LLDLYSKLGRLEDSSTVFHEI-TSPDSMA 303
Query: 285 WGALLGACKFYG 296
W A+L A +G
Sbjct: 304 WTAMLAAYATHG 315
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 219/396 (55%), Gaps = 41/396 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
D A R+F ++++ +W AM+ G V+ G A F +M +
Sbjct: 155 DFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA 214
Query: 45 ------------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
DV + ++D Y K A+ +FD+ P R+ W
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTW 274
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ LI+GY Q+ ++ + +F+ M +V P+E + S++SAC+ VG L + V CY+ +
Sbjct: 275 TALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK 334
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+SI+I T LID+ KCG ++ A +FE + +++++++ +MI G + HGYA A
Sbjct: 335 NSIEINTT-AGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFD 393
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF ML+ + P+ F +L+AC+HG LVEEG+ F +MK +++M P +HYACMVDL
Sbjct: 394 LFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLF 453
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R G L+EA L++ MP+E WGAL G+C + + ELG+ A+R+ +L+P +S Y
Sbjct: 454 GRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYT 513
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LL+++Y+ + W +V+ V+ +MK++ + K PG SWI
Sbjct: 514 LLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 122/246 (49%), Gaps = 4/246 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I GY+ G A LFD A +D W+ +I G+ +NG +EA+ F M+ V +
Sbjct: 144 LISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAAN 203
Query: 112 EYIMVSLMSACSQVGNLDLAKWVD-CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
E +VS++ A +V ++ + V YL + + ++L+DM KC D A K+
Sbjct: 204 EMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC-DVFIGSSLVDMYGKCSCYDDAQKV 262
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F+EMP R++ ++ ++I G ++ + +F +ML + P+ + +L+AC+H +
Sbjct: 263 FDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGAL 322
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
G+ M K S+ + ++DL + G L+EA + + + E + W A++
Sbjct: 323 HRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMIN 380
Query: 291 ACKFYG 296
+G
Sbjct: 381 GFAAHG 386
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 209/375 (55%), Gaps = 38/375 (10%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK-------------------- 58
N +V K G L AR V D+M RDVVS+ ++ GYA+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 59 --VGDIAS---------------ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
G +AS + +F K K+ W+V+I Y +N +P EA++++
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYS 298
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
ME +PD + S++ AC L L K + Y+ + + I + ALIDM AKC
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL-IPNLLLENALIDMYAKC 357
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G +++A +FE M RD+ S+ +MI G AV LF+K+ + GL+PD+ AF L
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
ACSH L+EEG+ F+ M Y + P EH ACMVDLL R+G++KEAY ++ M +E +
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNK 341
WGALLGAC+ + + ++G + A++LF+L PE S YVLLS+IYA A +W +V++++N
Sbjct: 478 ERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNI 537
Query: 342 MKERGLRKLPGCSWI 356
MK +GL+K PG S +
Sbjct: 538 MKSKGLKKNPGASNV 552
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 32 INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG 91
+++R + +D+ + +M YA + D+ASAR +FD+ P+R+ + +V+I Y NG
Sbjct: 61 VHSRIILEDLRCNSSLGVKLM-RAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 92 LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV 151
E +K+F M NV+PD Y ++ ACS G + + + + + S + + + T V
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI--HGSATKVGLSSTLFV 177
Query: 152 A-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
L+ M KCG + A + +EM +RD+ S+ S++ G + + + A+ + +M + +
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETM---KSKYSMVPSPEHYACMVDLLSRSGQLK 267
D +L A S+ E Y + M K S+V + M+ + ++
Sbjct: 238 SHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMGKKSLVS----WNVMIGVYMKNAMPV 291
Query: 268 EAYELLKSMPV---ESHASAWGALLGAC----------KFYGEVELGEIVANRLFE 310
EA EL M E A + ++L AC K +G +E +++ N L E
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 208/373 (55%), Gaps = 38/373 (10%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK-------------------- 58
N +V K G L AR V D+M RDVVS+ ++ GYA+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 59 --VGDIAS---------------ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
G +AS + +F K K+ W+V+I Y +N +P EA++++
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYS 298
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
ME +PD + S++ AC L L K + Y+ + + I + ALIDM AKC
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL-IPNLLLENALIDMYAKC 357
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G +++A +FE M RD+ S+ +MI G AV LF+K+ + GL+PD+ AF L
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
ACSH L+EEG+ F+ M Y + P EH ACMVDLL R+G++KEAY ++ M +E +
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNK 341
WGALLGAC+ + + ++G + A++LF+L PE S YVLLS+IYA A +W +V++++N
Sbjct: 478 ERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNI 537
Query: 342 MKERGLRKLPGCS 354
MK +GL+K PG S
Sbjct: 538 MKSKGLKKNPGAS 550
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 26/296 (8%)
Query: 32 INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNG 91
+++R + +D+ + +M YA + D+ASAR +FD+ P+R+ + +V+I Y NG
Sbjct: 61 VHSRIILEDLRCNSSLGVKLM-RAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 92 LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV 151
E +K+F M NV+PD Y ++ ACS G + + + + + S + + + T V
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI--HGSATKVGLSSTLFV 177
Query: 152 A-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
L+ M KCG + A + +EM +RD+ S+ S++ G + + + A+ + +M + +
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETM---KSKYSMVPSPEHYACMVDLLSRSGQLK 267
D +L A S+ E Y + M K S+V + M+ + ++
Sbjct: 238 SHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMGKKSLVS----WNVMIGVYMKNAMPV 291
Query: 268 EAYELLKSMPV---ESHASAWGALLGAC----------KFYGEVELGEIVANRLFE 310
EA EL M E A + ++L AC K +G +E +++ N L E
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 212/354 (59%), Gaps = 1/354 (0%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
AK VF M ++ SWN+++ GLV+ + A ++F+ MP +D+VS+T MI G++ G+I
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEI 388
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
+ LF P++D W+ +IS + NG EAL F M V P+ Y S++SA
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+ + +L + + + +I + V +L+ M KCGN + A K+F + + ++ SY
Sbjct: 449 ASLADLIEGLQIHGRVVKMNI-VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSY 507
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
+MI G S +G+ ++A+ LF+ + + G P+ F +L+AC H V+ G YF++MKS
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
Y++ P P+HYACMVDLL RSG L +A L+ +MP + H+ WG+LL A K + V+L E
Sbjct: 568 SYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAE 627
Query: 303 IVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ A +L ELEP++++PYV+LS +Y+ + D + N K + ++K PG SWI
Sbjct: 628 LAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 150/349 (42%), Gaps = 54/349 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG-D 61
A+ +F QM R++ SW AM+ + G + A +VFD+MP R S+ MI K D
Sbjct: 69 AEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCD 128
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ A LF P+++A ++ +I+G+ + G +EA E + + S+ S
Sbjct: 129 LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEA-------EFLYAETPVKFRDSVASN 181
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
G L KW + + + + ++++ K G + A LF+ M +R++ +
Sbjct: 182 VLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVIT 241
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA-AFTVILTACS-----------HGRL 229
+ +MI G G+ E GLF +M EG + N+ V+ AC HG +
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 230 VE------------------------EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
E K F MK+K S+ + ++ L + Q
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSV-----SWNSLITGLVQRKQ 356
Query: 266 LKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
+ EAYEL + MP + S W ++ F G+ E+ + V LF + PE
Sbjct: 357 ISEAYELFEKMPGKDMVS-WTDMIKG--FSGKGEISKCV--ELFGMMPE 400
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 170/398 (42%), Gaps = 97/398 (24%)
Query: 1 DNAKRVFVQMPE--RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK 58
D A+ ++ + P R+ + N ++ G ++ G A +VF M ++VVS + M+ GY K
Sbjct: 161 DEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCK 220
Query: 59 VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVS 117
+G I AR+LFD+ +R+ W+ +I GY + G + +F M + +VK + +
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 118 LMSAC---------SQVGNL--DLAKWVDCYLSQSSID-------IGQTHVV-------- 151
+ AC SQ+ L + D +L S + +G+ V
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 152 ----AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS----------------- 190
+LI + + A +LFE+MP +D+ S+ MI+G S
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE 400
Query: 191 --------------IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS----------- 225
+GY E+A+ F+KML + + P++ F+ +L+A +
Sbjct: 401 KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 226 HGRLVEEG-------KHYFETMKSK----------YSMVPSPE--HYACMVDLLSRSGQL 266
HGR+V+ ++ +M K +S + P Y M+ S +G
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520
Query: 267 KEA---YELLKSMPVESHASAWGALLGACKFYGEVELG 301
K+A + +L+S E + + ALL AC G V+LG
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 209/356 (58%), Gaps = 3/356 (0%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A+ +F QM +R+ SWN M+ G V + +A +F +MP RD S+ +M+ GYA VG+
Sbjct: 299 SARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGN 358
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ AR F+K P++ W+ +I+ Y +N EA+ +F M + KPD + + SL+SA
Sbjct: 359 VELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLF 180
+ + NL L + + ++ I H ALI M ++CG + + ++F+EM KR++
Sbjct: 419 STGLVNLRLGMQMHQIVVKTVIPDVPVH--NALITMYSRCGEIMESRRIFDEMKLKREVI 476
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
++ +MI G + HG A +A+ LF M + G+ P + F +L AC+H LV+E K F +M
Sbjct: 477 TWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM 536
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL 300
S Y + P EHY+ +V++ S GQ +EA ++ SMP E + WGALL AC+ Y V L
Sbjct: 537 MSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGL 596
Query: 301 GEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ A + LEPE+S+PYVLL ++YA W + S V+ M+ + ++K G SW+
Sbjct: 597 AHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 61/328 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGD---LINARKVFDDMPERDVVSFTVMIDGYA 57
+ A+++F MP+R++ +WN M+ G V G L ARK+FD+MP RD S+ MI GYA
Sbjct: 88 NQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYA 147
Query: 58 KVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP------- 110
K I A LF+K P+R+A WS +I+G+ QNG + A+ +F+ M + + P
Sbjct: 148 KNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAG 207
Query: 111 ---DE-----------------------YIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
+E Y +L+ Q G ++ A+ C Q
Sbjct: 208 LIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAAR---CLFDQIPDL 264
Query: 145 IGQTH-----------VVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
G H VV+ ++I K G++ A LF++M RD S+ +MI G
Sbjct: 265 CGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVH 324
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
E A LF++M N D ++ ++++ + VE +HYFE K+++
Sbjct: 325 VSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV----- 375
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVE 279
+ ++ ++ KEA +L M +E
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIE 403
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 41/349 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+ +F ++ RN +WN M+ G VK ++ ARK+FD MP+RDVV++ MI GY G I
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGI 118
Query: 63 ---ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
AR LFD+ P RD+F W+ +ISGYA+N EAL +F+ M N +++
Sbjct: 119 RFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS----WSAMI 174
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM----- 174
+ Q G +D A + + + + + AL+ K + A + +
Sbjct: 175 TGFCQNGEVDSA-----VVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS 229
Query: 175 PKRDL-FSYCSMIQGLSIHGYAEQAVGLFNKM-----------LNEGLIPDNAAFTVILT 222
+ DL ++Y ++I G G E A LF+++ E + ++ ++
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
A V + F+ MK + ++ + M+D ++++A+ L MP A
Sbjct: 290 AYLKVGDVVSARLLFDQMKDRDTI-----SWNTMIDGYVHVSRMEDAFALFSEMP-NRDA 343
Query: 283 SAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQ 331
+W ++ G VEL A FE PE + V +SI AA ++
Sbjct: 344 HSWNMMVSGYASVGNVEL----ARHYFEKTPEKHT--VSWNSIIAAYEK 386
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 124/313 (39%), Gaps = 75/313 (23%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N + +++ G + AR +F+ + R+ V++ MI GY K ++ AR LFD PKRD
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 79 LWSVLISGYAQNG---LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD 135
W+ +ISGY G EA K+F M + D W
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMP----------------------SRDSFSW-- 139
Query: 136 CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
+I AK + A LFE+MP+R+ S+ +MI G +G
Sbjct: 140 ----------------NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEV 183
Query: 196 EQAVGLFNKM----------LNEGLIPDNAAFTVILTACSHGRLV---EEGKHYFETMKS 242
+ AV LF KM L GLI + +G LV E+ + + T+
Sbjct: 184 DSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIV 243
Query: 243 KYSMVPSPEHYACMVDLL------SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
Y E C+ D + G+ +E + + +W +++ A
Sbjct: 244 GYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERF--------CKNVVSWNSMIKAY---- 291
Query: 297 EVELGEIVANRLF 309
+++G++V+ RL
Sbjct: 292 -LKVGDVVSARLL 303
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 220/361 (60%), Gaps = 10/361 (2%)
Query: 1 DNAKRVFVQMP--ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK 58
+ A+ +F +MP +N+ +W+ M+G V + +ARK F+D+PE++ +++M+ GY +
Sbjct: 80 EKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFR 139
Query: 59 VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
+GD+ ARA+F + RD +W+ LI+GYAQNG ++A+ F M+ +PD + S+
Sbjct: 140 IGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 199
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD 178
+SAC+Q G LD+ + V ++ I++ Q V ALIDM AKCG+++ A +FE + R
Sbjct: 200 LSACAQSGRLDVGREVHSLINHRGIELNQ-FVSNALIDMYAKCGDLENATSVFESISVRS 258
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+ SMI L+IHG ++A+ +F+ M + L PD F +LTAC HG + EG F
Sbjct: 259 VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFS 318
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
MK++ + P+ +H+ C++ LL RSG+LKEAY L+K M V+ + + GALLGACK + +
Sbjct: 319 EMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDT 377
Query: 299 ELGEIVANRLFELEPENSSPY-----VLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGC 353
E+ E V ++ E ++ Y +S++YA ++W ++ +M++RGL K PG
Sbjct: 378 EMAEQVM-KIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGL 436
Query: 354 S 354
S
Sbjct: 437 S 437
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 13/259 (5%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK-APKRDAFLWSVLIS 85
K G +++ARKVFD+MPER+V ++ MI GY GD A LF++ + R+ W +I
Sbjct: 12 KCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIK 71
Query: 86 GYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
GY + +A ++F+ M EL NVK +M+ + ++ K D I
Sbjct: 72 GYGKRIEIEKARELFERMPFELKNVKAWS-VMLGVY--------VNNRKMEDARKFFEDI 122
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
V + ++ + G++ A +F + RDL + ++I G + +GY++ A+ F
Sbjct: 123 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFF 182
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
M EG PD + IL+AC+ ++ G+ + + + A ++D+ ++
Sbjct: 183 NMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNA-LIDMYAKC 241
Query: 264 GQLKEAYELLKSMPVESHA 282
G L+ A + +S+ V S A
Sbjct: 242 GDLENATSVFESISVRSVA 260
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
V ++LI M KCG + A K+F+EMP+R++ ++ +MI G +G A A GLF ++
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---S 58
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
+ + + ++ +E+ + FE M + V + ++ M+ + + ++++A
Sbjct: 59 VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKA---WSVMLGVYVNNRKMEDA 115
Query: 270 YELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF 309
+ + +P E +A W ++ G+V + R+F
Sbjct: 116 RKFFEDIP-EKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 154
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 254 bits (649), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 211/401 (52%), Gaps = 46/401 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGD------------------------------ 30
D A++VF + +R + WNA+ L G
Sbjct: 129 DYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC 188
Query: 31 ---------LINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
L+ +++ + R V T ++D YA+ G + A +F P R+
Sbjct: 189 VASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNV 248
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD 135
WS +I+ YA+NG EAL+ F+ M E + P+ MVS++ AC+ + L+ K +
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 136 CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
Y+ + +D V++AL+ M +CG ++ ++F+ M RD+ S+ S+I +HGY
Sbjct: 309 GYILRRGLD-SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC 255
++A+ +F +ML G P F +L ACSH LVEEGK FETM + + P EHYAC
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN 315
MVDLL R+ +L EA ++++ M E WG+LLG+C+ +G VEL E + RLF LEP+N
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Query: 316 SSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ YVLL+ IYA A W +V VK ++ RGL+KLPG W+
Sbjct: 488 AGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWM 528
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 13/270 (4%)
Query: 35 RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPN 94
R + D+ ++D T +I Y+ +G + AR +FDK KR ++W+ L G
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 95 EALKIFQGMELMNVKPDEYIMVSLMSAC----SQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
E L ++ M + V+ D + ++ AC V +L K + +L++ ++
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS-SHVYI 219
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
+ L+DM A+ G +D A+ +F MP R++ S+ +MI + +G A +A+ F +M+ E
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 211 --IPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
P++ +L AC+ +E+GK H + + S++P + +V + R G+L
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV---ISALVTMYGRCGKL 336
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYG 296
+ + M + +W +L+ + +G
Sbjct: 337 EVGQRVFDRMH-DRDVVSWNSLISSYGVHG 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 20/244 (8%)
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
LI + G +A+++ P + L+ C +L A V ++ +
Sbjct: 52 LIQSLCKEGKLKQAIRVLS----QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
D + LI M + G++D A K+F++ KR ++ + ++ + L++ G+ E+ +GL+
Sbjct: 108 SD-QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 203 NKMLNEGLIPDNAAFTVILTA-----CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM- 256
KM G+ D +T +L A C+ L++ + + + YS H M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS-----SHVYIMT 221
Query: 257 --VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
VD+ +R G + A + MPV + S W A++ AC + R E +
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVS-WSAMI-ACYAKNGKAFEALRTFREMMRETK 279
Query: 315 NSSP 318
+SSP
Sbjct: 280 DSSP 283
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 194/309 (62%), Gaps = 5/309 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y+K GD+ AR +FD+ P++ W+ L+SG+ QNGL +EA+++F M +PD
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
VSL+SAC+Q G + L WV Y+ +D+ + ALI++ ++CG++ +A ++F
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL-NVKLGTALINLYSRCGDVGKAREVF 266
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLV 230
++M + ++ ++ +MI HGY +QAV LFNKM ++ G IP+N F +L+AC+H LV
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA---WGA 287
EEG+ ++ M Y ++P EH+ CMVD+L R+G L EAY+ + + A+A W A
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 288 LLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
+LGACK + +LG +A RL LEP+N +V+LS+IYA + + +VSH+++ M L
Sbjct: 387 MLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
Query: 348 RKLPGCSWI 356
RK G S I
Sbjct: 447 RKQVGYSVI 455
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 149/296 (50%), Gaps = 12/296 (4%)
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
IA LF P D FL++ +I ++ LP + ++ M NV P Y S++ +
Sbjct: 57 IAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS 116
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C+ + L + K V C+ S + T+V AAL+ +KCG+M+ A ++F+ MP++ + +
Sbjct: 117 CADLSALRIGKGVHCHAVVSGFGL-DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA 175
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ S++ G +G A++A+ +F +M G PD+A F +L+AC+ V G + +
Sbjct: 176 WNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII 235
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
S+ + + + +++L SR G + +A E+ M E++ +AW A++ A YG G
Sbjct: 236 SE-GLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISA---YGTHGYG 290
Query: 302 EIVANRLFELEPE-----NSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPG 352
+ ++E + N+ +V + S A A + V +M + R +PG
Sbjct: 291 QQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMT-KSYRLIPG 345
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 46/266 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSF------- 49
+ A++VF +MPE+++ +WN++V G + G A +VF M E D +F
Sbjct: 159 EGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSAC 218
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
T +I+ Y++ GD+ AR +FDK + + W+
Sbjct: 219 AQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWT 278
Query: 82 VLISGYAQNGLPNEALKIFQGME-LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+IS Y +G +A+++F ME P+ V+++SAC+ G ++ + V +++
Sbjct: 279 AMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK 338
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS----YCSMIQGLSIHGYAE 196
S I ++DM + G +D A K ++ + + +M+ +H +
Sbjct: 339 SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYD 398
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILT 222
V + +++ L PDN V+L+
Sbjct: 399 LGVEIAKRLI--ALEPDNPGHHVMLS 422
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 206/340 (60%), Gaps = 4/340 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
A++G K G AR VFD M +++ V++ MIDGY + G + +A +FDK P+RD
Sbjct: 113 TAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLI 172
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY- 137
W+ +I+G+ + G EAL F+ M++ VKPD +++ ++AC+ +G L WV Y
Sbjct: 173 SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
LSQ + V +LID+ +CG ++ A ++F M KR + S+ S+I G + +G A +
Sbjct: 233 LSQDFKN--NVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHE 290
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
++ F KM +G PD FT LTACSH LVEEG YF+ MK Y + P EHY C+V
Sbjct: 291 SLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLV 350
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG-EVELGEIVANRLFELEPENS 316
DL SR+G+L++A +L++SMP++ + G+LL AC +G + L E + L +L ++
Sbjct: 351 DLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSH 410
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S YV+LS++YAA +W S ++ KMK GL+K PG S I
Sbjct: 411 SNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 33/180 (18%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV--GNLDLAKWVDCY 137
W+ I+ +NG EA K F M L V+P+ ++L+S C G+ L + Y
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGY 98
Query: 138 LSQSSIDIGQTHVVAALIDMNAK-------------------------------CGNMDR 166
+ +D V A+I M +K G +D
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDN 158
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
A K+F++MP+RDL S+ +MI G GY E+A+ F +M G+ PD A L AC++
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 19/184 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAK 58
A++VF M +R + SWN+++ G G+ + F M E+ D V+FT + +
Sbjct: 260 ARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSH 319
Query: 59 VGDIASARALFD-------KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
VG + F +P+ + + L+ Y++ G +ALK+ Q M + KP+
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHY--GCLVDLYSRAGRLEDALKLVQSMPM---KPN 374
Query: 112 EYIMVSLMSACSQVG-NLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
E ++ SL++ACS G N+ LA+ + +L+ ++ +V+ L +M A G + A+K+
Sbjct: 375 EVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVI--LSNMYAADGKWEGASKM 432
Query: 171 FEEM 174
+M
Sbjct: 433 RRKM 436
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 213/395 (53%), Gaps = 40/395 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV------- 51
D+ +RVF MP +++ S+N ++ G + G +A ++ +M D+ SFT+
Sbjct: 157 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 216
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D YAK I + +F + RD W+
Sbjct: 217 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 276
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L++GY QNG NEAL++F+ M VKP S++ AC+ + L L K + Y+ +
Sbjct: 277 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 336
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ +AL+DM +KCGN+ A K+F+ M D S+ ++I G ++HG+ +AV L
Sbjct: 337 GFG-SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 395
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M +G+ P+ AF +LTACSH LV+E YF +M Y + EHYA + DLL
Sbjct: 396 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 455
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G+L+EAY + M VE S W LL +C + +EL E VA ++F ++ EN YVL
Sbjct: 456 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 515
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ ++YA+ +W +++ ++ +M+++GLRK P CSWI
Sbjct: 516 MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWI 550
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 136/254 (53%), Gaps = 5/254 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ + +++ YAK+ + S R +F+ P++D ++ +I+GYAQ+G+ +AL++ + M
Sbjct: 139 DLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 198
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
++KPD + + S++ S+ ++ K + Y+ + ID ++ ++L+DM AK +
Sbjct: 199 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID-SDVYIGSSLVDMYAKSARI 257
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ + ++F + RD S+ S++ G +G +A+ LF +M+ + P AF+ ++ AC
Sbjct: 258 EDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 317
Query: 225 SHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
+H + GK + ++ + + + +VD+ S+ G +K A ++ M V S
Sbjct: 318 AHLATLHLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS 375
Query: 284 AWGALLGACKFYGE 297
W A++ +G
Sbjct: 376 -WTAIIMGHALHGH 388
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 136/328 (41%), Gaps = 41/328 (12%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDMPERDV-------VSFTVMIDGYAKVGDIASARA 67
++S A++ L+K I ++ + + + S +++I Y + + A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALL 60
Query: 68 LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
LF W +I + L ++AL F M PD + S++ +C+ + +
Sbjct: 61 LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQ 187
L + V ++ + +D + AL++M AK MD ++FE MP++D+ SY ++I
Sbjct: 121 LRFGESVHGFIVRLGMDC-DLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIA 179
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG--- 233
G + G E A+ + +M L PD+ + +L S HG ++ +G
Sbjct: 180 GYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS 239
Query: 234 ----KHYFETMKSKYSMVPSPEH------------YACMVDLLSRSGQLKEAYELLKSM- 276
M +K + + E + +V ++G+ EA L + M
Sbjct: 240 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV 299
Query: 277 --PVESHASAWGALLGACKFYGEVELGE 302
V+ A A+ +++ AC + LG+
Sbjct: 300 TAKVKPGAVAFSSVIPACAHLATLHLGK 327
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 250 bits (639), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 215/397 (54%), Gaps = 42/397 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD--------------- 45
++A++V +MPE+N+ SW AM+ + G A VF +M D
Sbjct: 104 EDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSC 163
Query: 46 ------------------------VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ + ++D YAK G I AR +F+ P+RD +
Sbjct: 164 IRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCT 223
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+GYAQ GL EAL++F + + P+ SL++A S + LD K C++ +
Sbjct: 224 AIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 283
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + +LIDM +KCGN+ A +LF+ MP+R S+ +M+ G S HG + + L
Sbjct: 284 ELPFYAV-LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
Query: 202 FNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHYFETM-KSKYSMVPSPEHYACMVDL 259
F M +E + PD +L+ CSHGR+ + G + F+ M +Y P EHY C+VD+
Sbjct: 343 FRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY 319
L R+G++ EA+E +K MP + A G+LLGAC+ + V++GE V RL E+EPEN+ Y
Sbjct: 403 LGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNY 462
Query: 320 VLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
V+LS++YA+A +W DV++V+ M ++ + K PG SWI
Sbjct: 463 VILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 149/287 (51%), Gaps = 15/287 (5%)
Query: 11 PERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVM----IDGYAKVGDIASAR 66
PE ++A++ + L + ++V M + + T + + Y K + AR
Sbjct: 48 PEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDAR 107
Query: 67 ALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG 126
+ D+ P+++ W+ +IS Y+Q G +EAL +F M + KP+E+ +++++C +
Sbjct: 108 KVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRAS 167
Query: 127 NLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMI 186
L L K + + + + D V ++L+DM AK G + A ++FE +P+RD+ S ++I
Sbjct: 168 GLGLGKQIHGLIVKWNYD-SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
Query: 187 QGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKS 242
G + G E+A+ +F+++ +EG+ P+ + +LTA S L++ GK H
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
Y+++ + ++D+ S+ G L A L +MP E A +W A+L
Sbjct: 287 FYAVLQNS-----LIDMYSKCGNLSYARRLFDNMP-ERTAISWNAML 327
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 250 bits (639), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 201/342 (58%), Gaps = 5/342 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFD----KAPK 74
+AM+ K G + +F+ + I G ++ G + A +F+ + +
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
+ W+ +I+G AQNG EAL++F+ M++ VKP+ + S++ AC + L +
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
+ + + + HV +ALIDM AKCG ++ + +F MP ++L + S++ G S+HG
Sbjct: 411 HGFAVRVHL-LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
A++ + +F ++ L PD +FT +L+AC L +EG YF+ M +Y + P EHY+
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS 529
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
CMV+LL R+G+L+EAY+L+K MP E + WGALL +C+ V+L EI A +LF LEPE
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE 589
Query: 315 NSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
N YVLLS+IYAA W +V ++NKM+ GL+K PGCSWI
Sbjct: 590 NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 148/315 (46%), Gaps = 46/315 (14%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWS 81
++ G + +ARKVFD M ++DVV+ + ++ YA+ G + + + + + W+
Sbjct: 162 MRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
++SG+ ++G EA+ +FQ + + PD+ + S++ + L++ + + Y+ +
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ 281
Query: 142 SIDIGQTHVVAALIDMNAKCGN-------------------------------MDRANKL 170
+ + V++A+IDM K G+ +D+A ++
Sbjct: 282 GL-LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 171 FEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
FE ++ ++ S+ S+I G + +G +A+ LF +M G+ P++ +L AC +
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 227 GRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
+ G+ H F + ++ + + ++D+ ++ G++ + + MP ++
Sbjct: 401 IAALGHGRSTHGFAV---RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN-LVC 456
Query: 285 WGALLGACKFYGEVE 299
W +L+ +G+ +
Sbjct: 457 WNSLMNGFSMHGKAK 471
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 138/356 (38%), Gaps = 75/356 (21%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y+ A + P + +S LI + L +++ +F M + PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+++ +L C+++ + K + C S +D+ V ++ M +CG M A K+F
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM-DAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 172 EEMPKRD-----------------------------------LFSYCSMIQGLSIHGYAE 196
+ M +D + S+ ++ G + GY +
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG----KHYFETM- 240
+AV +F K+ + G PD + +L + HG ++++G K M
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 241 ----KSK--YSMVPSPEHYACM--------VDLLSRSGQLKEA---YELLKSMPVESHAS 283
KS Y ++ + M + LSR+G + +A +EL K +E +
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 284 AWGALLGACKFYGEVELGEIVANRLF-ELEPENSSP-YVLLSSIYAAADQWLDVSH 337
+W +++ C G+ +I A LF E++ P +V + S+ A + H
Sbjct: 355 SWTSIIAGCAQNGK----DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGH 406
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 250 bits (639), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 224/394 (56%), Gaps = 42/394 (10%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PE------------ 43
+ ++VF +M R+L SWN+++ + A +F +M P+
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 44 --------RDVVSFTV--------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
R V FT+ ++ YAK+G + SARA+F+ P D W+
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 82 VLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ISGYAQNG +EA++++ ME + ++ VS++ ACSQ G L + L +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ + + VV +L DM KCG ++ A LF ++P+ + + ++I HG+ E+AV
Sbjct: 480 NGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 538
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF +ML+EG+ PD+ F +L+ACSH LV+EG+ FE M++ Y + PS +HY CMVD+
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R+GQL+ A + +KSM ++ AS WGALL AC+ +G V+LG+I + LFE+EPE+ +V
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 658
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
LLS++YA+A +W V +++ +GLRK PG S
Sbjct: 659 LLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 171/372 (45%), Gaps = 62/372 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGD------LINARKVFDDMP------------- 42
NA+ +F +MP R++ SWNAM+ G + G+ L N + D +
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGD 262
Query: 43 ----------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
E ++ +ID YA+ G + + +FD+ RD W+ +I
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Y N P A+ +FQ M L ++PD ++SL S SQ+G++ + V + + +
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ A++ M AK G +D A +F +P D+ S+ ++I G + +G+A +A+ ++N M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 207 NEGLIPDN-AAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
EG I N + +L ACS HGRL++ G Y + +V S
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL-YLDVF-----VVTS----- 491
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE--LE 312
+ D+ + G+L++A L +P ++ W L+ F+G E ++ + + ++
Sbjct: 492 -LADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Query: 313 PENSSPYVLLSS 324
P++ + LLS+
Sbjct: 550 PDHITFVTLLSA 561
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGD---------------------------LINAR 35
A+ F + R++ +WN M+ G + G+ L R
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR 164
Query: 36 KVFDDMPER----------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
V D DV +I Y++ + +AR LFD+ P RD W+ +IS
Sbjct: 165 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GY Q+G EAL + G+ M D +VSL+SAC++ G+ + + Y + ++
Sbjct: 225 GYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE- 279
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
+ V LID+ A+ G + K+F+ M RDL S+ S+I+ ++ +A+ LF +M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 206 LNEGLIPD 213
+ PD
Sbjct: 340 RLSRIQPD 347
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 12/267 (4%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
++ ++AR V + +S +++ Y +G++A AR FD RD + W+++IS
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCIS-AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 86 GYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
GY + G +E ++ F L + + PD S++ AC V +D K + C +
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--IDGNK-IHCLALKFGF- 181
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ +V A+LI + ++ + A LF+EMP RD+ S+ +MI G G A++A+ L N
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 241
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
+ D+ +L+AC+ G + K+ + ++DL + G
Sbjct: 242 L----RAMDSVTVVSLLSACTEAGDFNRGV-TIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 265 QLKEAYELLKSMPVESHASAWGALLGA 291
+L++ ++ M V S W +++ A
Sbjct: 297 RLRDCQKVFDRMYVRDLIS-WNSIIKA 322
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 11/179 (6%)
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
+L C+ NL AK + L S I + A L+++ GN+ A F+ +
Sbjct: 59 TLFRYCT---NLQSAKCLHARLVVSK-QIQNVCISAKLVNLYCYLGNVALARHTFDHIQN 114
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNK-MLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
RD++++ MI G G + + + F+ ML+ GL PD F +L AC R V +G
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNK 171
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL-GACK 293
+ K+ + A ++ L SR + A L MPV S W A++ G C+
Sbjct: 172 -IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISGYCQ 228
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 189/307 (61%), Gaps = 1/307 (0%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T + Y+K+ +I SAR LFD++P++ W+ +ISGY QNGL +A+ +F+ M+
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P+ + ++SAC+Q+G L L KWV + + + +V ALI M AKCG++ A +
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE-SSIYVSTALIGMYAKCGSIAEARR 476
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
LF+ M K++ ++ +MI G +HG ++A+ +F +MLN G+ P F +L ACSH L
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
V+EG F +M +Y PS +HYACMVD+L R+G L+ A + +++M +E +S W LL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 290 GACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRK 349
GAC+ + + L V+ +LFEL+P+N +VLLS+I++A + + V+ K+R L K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 350 LPGCSWI 356
PG + I
Sbjct: 657 APGYTLI 663
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 148/309 (47%), Gaps = 16/309 (5%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
+ G +I+ + V D + +++ + ++ Y K + AR +FD+ P++D LW+ +ISG
Sbjct: 136 RAGRVIHGQAVVDGC-DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG 194
Query: 87 YAQNGLPNEALKIFQGMELMN---VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
Y +N + E++++F+ +L+N + D ++ ++ A +++ L L + +++
Sbjct: 195 YRKNEMYVESIQVFR--DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+V+ I + +KCG + + LF E K D+ +Y +MI G + +G E ++ LF
Sbjct: 253 -YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+++ G ++ ++ H L+ Y +KS + S + + S+
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY--CLKSNFLSHASVS--TALTTVYSKL 367
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY-VLL 322
+++ A +L P E +W A++ Y + L E + E++ SP V +
Sbjct: 368 NEIESARKLFDESP-EKSLPSWNAMISG---YTQNGLTEDAISLFREMQKSEFSPNPVTI 423
Query: 323 SSIYAAADQ 331
+ I +A Q
Sbjct: 424 TCILSACAQ 432
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 48/265 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
++A+++F + PE++L SWNAM+ G + G +A +F +M
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
E + T +I YAK G IA AR LFD K++ W+
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV-DCYLSQ 140
+ISGY +G EAL IF M + P + ++ ACS G + + + + +
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM---PKRDLFSYCSMIQGLSIHGYAEQ 197
+ H A ++D+ + G++ RA + E M P ++ +++ IH
Sbjct: 551 YGFEPSVKH-YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWE--TLLGACRIHKDTNL 607
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILT 222
A + K+ L PDN + V+L+
Sbjct: 608 ARTVSEKLFE--LDPDNVGYHVLLS 630
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 204/344 (59%), Gaps = 4/344 (1%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
NL NA++ K + A++ FD M ++D+ S+ M+ G+ ++GD+ +A+A+FD+ P
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP 327
Query: 74 KRDAFLWSVLISGYAQNGLPNEALK-IFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLA 131
KRD W+ L+ GY++ G ++ +F M ++ VKPD MVSL+S + G L
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+WV + + + G + +ALIDM KCG ++RA +F+ ++D+ + SMI GL+
Sbjct: 388 RWVHGLVIRLQLK-GDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAF 446
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
HG +QA+ LF +M EG+ P+N +LTACSH LVEEG H F MK K+ P E
Sbjct: 447 HGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETE 506
Query: 252 HYACMVDLLSRSGQLKEAYELL-KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
HY +VDLL R+G+++EA +++ K MP+ S WG++L AC+ ++E E+ L +
Sbjct: 507 HYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLK 566
Query: 311 LEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
LEPE YVLLS+IYA +W + M+ RG++K G S
Sbjct: 567 LEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 153/332 (46%), Gaps = 43/332 (12%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y ++G+ A +F + P D ++V+I GYA+ G EALK++ M ++PD
Sbjct: 172 LVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPD 231
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKC--------- 161
EY ++SL+ C + ++ L K V ++ + +++ AL+DM KC
Sbjct: 232 EYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRA 291
Query: 162 ----------------------GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
G+M+ A +F++MPKRDL S+ S++ G S G ++ V
Sbjct: 292 FDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTV 351
Query: 200 G-LFNKM-LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
LF +M + E + PD +++ ++ + G+ + + + + + ++
Sbjct: 352 RELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR-WVHGLVIRLQLKGDAFLSSALI 410
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
D+ + G ++ A+ + K+ E + W +++ F+G G+ ++ E +
Sbjct: 411 DMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGN---GQQALQLFGRMQEEGVT 466
Query: 318 P--YVLLSSIYAAADQWL--DVSHVKNKMKER 345
P LL+ + A + L + HV N MK++
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 42/219 (19%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGG-DLINARKVFDDM-------PER-------- 44
+ A+ VF QMP+R+L SWN+++ G K G D R++F +M P+R
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLIS 376
Query: 45 -------------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL 79
D + +ID Y K G I A +F A ++D L
Sbjct: 377 GAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVAL 436
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ +I+G A +G +AL++F M+ V P+ ++++++ACS G ++ V ++
Sbjct: 437 WTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMK 496
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE-EMPKR 177
+T +L+D+ + G ++ A + + +MP R
Sbjct: 497 DKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 37 VFDDMPERDVVSFTVMIDGYAKVGDIASARALF-DKAPKRDAFLWSVLISGYAQNGLPNE 95
+ D P ++ F+ + Y + D+A + LF + P + F+++ +IS + + NE
Sbjct: 63 ICDTFPMSRLIFFSAIT--YPENLDLA--KLLFLNFTPNPNVFVYNTMISAVSSS--KNE 116
Query: 96 ALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALI 155
++ M V PD + LM A S + + K + C++ S ++ +L+
Sbjct: 117 CFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLV 173
Query: 156 DMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
+ GN A K+F MP D+ S+ MI G + G++ +A+ L+ KM+++G+ PD
Sbjct: 174 KFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEY 233
Query: 216 AFTVILTACSHGRLVEEGK 234
+L C H + GK
Sbjct: 234 TVLSLLVCCGHLSDIRLGK 252
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 200/338 (59%), Gaps = 1/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N++V K G AR +F+ MP +D+VS+ ++ GY G I A+ +F + +++
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W ++ISG A+NG E LK+F M+ +P +Y + +C+ +G + L
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ D ALI M AKCG ++ A ++F MP D S+ ++I L HG+ +A
Sbjct: 444 LKIGFD-SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
V ++ +ML +G+ PD +LTACSH LV++G+ YF++M++ Y + P +HYA ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LL RSG+ +A +++S+P + A W ALL C+ +G +ELG I A++LF L PE+
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
Y+LLS+++AA QW +V+ V+ M++RG++K CSWI
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 36/299 (12%)
Query: 31 LINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL-WSVLISGYAQ 89
L +ARKVFD++ E+D S+T M+ GY K G L + + ++ +ISGY
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 90 NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH 149
G EAL++ + M ++ DE+ S++ AC+ G L L K V Y+ + + H
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFH 321
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS------------------------- 184
+L+ + KCG D A +FE+MP +DL S+ +
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 185 ------MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
MI GL+ +G+ E+ + LF+ M EG P + AF+ + +C+ G+ Y
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ K S ++ + ++ G ++EA ++ ++MP S W AL+ A +G
Sbjct: 442 QLL-KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQHGH 498
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 56/350 (16%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP--KRD 76
N ++ K +L AR++FD++ E D ++ T M+ GY GDI AR +F+KAP RD
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 77 AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
+++ +I+G++ N A+ +F M+ KPD + S+++ + V + D + V
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVAD-DEKQCVQF 171
Query: 137 YLSQSSIDIGQ-THVVAALIDMNAKCGN----MDRANKLFEEMPKRD------------- 178
+ + G T V AL+ + +KC + + A K+F+E+ ++D
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 179 -------------------LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
L +Y +MI G G+ ++A+ + +M++ G+ D +
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 220 ILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHY-ACMVDLLSRSGQLKEAYELLKSM 276
++ AC+ L++ GK H + + +S H+ +V L + G+ EA + + M
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 277 PVESHASAWGALLGACKFYGEVELGEIVANRLF--ELEPENSSPYVLLSS 324
P + S W ALL G V G I +L E++ +N ++++ S
Sbjct: 347 PAKDLVS-WNALLS-----GYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 213/398 (53%), Gaps = 47/398 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTV--- 51
+ A++VF +MP+R+ +W ++ G + +A F+ M P +S +
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAA 171
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D Y + G + A+ +FD R+ W+
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LI+G+A+ +AL++FQGM +P + SL ACS G L+ KWV Y+ +S
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
Query: 142 SIDIGQTHVVAA---LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
G+ V A L+DM AK G++ A K+F+ + KRD+ S+ S++ + HG+ ++A
Sbjct: 292 ----GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
V F +M G+ P+ +F +LTACSH L++EG HY+E MK K +VP HY +VD
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVD 406
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LL R+G L A ++ MP+E A+ W ALL AC+ + ELG A +FEL+P++ P
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 466
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+V+L +IYA+ +W D + V+ KMKE G++K P CSW+
Sbjct: 467 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 22 VGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
V L+ G +++A + + D+V +++ YAK G + AR +F+K P+RD W+
Sbjct: 72 VFKLLIQGRIVHAH-ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWT 130
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LISGY+Q+ P +AL F M P+E+ + S++ A + + + +
Sbjct: 131 TLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 190
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D HV +AL+D+ + G MD A +F+ + R+ S+ ++I G + E+A+ L
Sbjct: 191 GFD-SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM-KSKYSMVPSPEHYACMVDLL 260
F ML +G P + ++ + ACS +E+GK M KS +V + ++D+
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMY 307
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
++SG + +A ++ + + +W +LL A +G
Sbjct: 308 AKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 342
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 209/395 (52%), Gaps = 40/395 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------P------------ 42
+ A ++F +RN +W+AMV G + G+ + A K+F M P
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
ER + + T ++D YAK G +A AR FD +RD LW+
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LISGY QN EAL +++ M+ + P++ M S++ ACS + L+L K V + +
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + + +AL M +KCG+++ N +F P +D+ S+ +MI GLS +G ++A+ L
Sbjct: 453 GFGL-EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +ML EG+ PD+ F I++ACSH VE G YF M + + P +HYACMVDLLS
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLS 571
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+GQLKEA E ++S ++ W LL ACK +G+ ELG +L L SS YV
Sbjct: 572 RAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQ 631
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS IY A + DV V M+ G+ K GCSWI
Sbjct: 632 LSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 167/378 (44%), Gaps = 81/378 (21%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF-------DDMPERDVVSFTVM- 52
++ +VF MPERN +W+ MV G G + A KVF ++ + D V V+
Sbjct: 170 EDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLS 229
Query: 53 ---------------------------------IDGYAKVGDIASARALFDKAPKRDAFL 79
+ Y+K + A +FD + R++
Sbjct: 230 SLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSIT 289
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
WS +++GY+QNG EA+K+F M +KP EY +V +++ACS + L+ K + +L
Sbjct: 290 WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL- 348
Query: 140 QSSIDIG-QTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
+ +G + H+ A AL+DM AK G + A K F+ + +RD+ + S+I G + E
Sbjct: 349 ---LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNE 405
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG-------KHYFE 238
+A+ L+ +M G+IP++ +L ACS HG ++ G
Sbjct: 406 EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 239 TMKSK----------YSMVPSPE--HYACMVDLLSRSGQLKEAYELLKSMPVESHAS--- 283
TM SK + P+ + + M+ LS +GQ EA EL + M E
Sbjct: 466 TMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDV 525
Query: 284 AWGALLGACKFYGEVELG 301
+ ++ AC G VE G
Sbjct: 526 TFVNIISACSHKGFVERG 543
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 47/331 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKV---FDDMPERDVV------------ 47
A +F + +++ SWN+++ G + G + ++ V F +M +D++
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 48 ---------------------SF------TVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
SF T ++ Y K G + +F P+R+ + W
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 81 SVLISGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
S ++SGYA G EA+K+F E +Y+ +++S+ + + L + + C
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ + +G + AL+ M +KC +++ A K+F+ R+ ++ +M+ G S +G + +A
Sbjct: 248 IKNGL-LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
V LF++M + G+ P +L ACS +EEGK + K +VD
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQ-LHSFLLKLGFERHLFATTALVD 365
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ +++G L +A + + E + W +L+
Sbjct: 366 MYAKAGCLADARKGFDCLQ-ERDVALWTSLI 395
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 157/334 (47%), Gaps = 25/334 (7%)
Query: 4 KRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIA 63
K++ +RNL + A+ G +++ G + V+++ YAK G +A
Sbjct: 19 KKLTHHSQQRNLVAGRAVHGQIIRTG------------ASTCIQHANVLVNFYAKCGKLA 66
Query: 64 SARALFDKAPKRDAFLWSVLISGYAQNGLPNEA---LKIFQGMELMNVKPDEYIMVSLMS 120
A ++F+ +D W+ LI+GY+QNG + + +++F+ M ++ P+ Y + +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
A S + + + + + + S G +V +L+ M K G ++ K+F MP+R+ +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMS-SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA--AFTVILTACSHGRLVEEGKHYFE 238
++ +M+ G + G E+A+ +FN L E ++ FT +L++ + V G+
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ-IH 244
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
+ K ++ +V + S+ L EA ++ S + ++ W A++ GE
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG-DRNSITWSAMVTGYSQNGES 303
Query: 299 ELGEIVANRLFE--LEPENSSPYVLLSSIYAAAD 330
+ +R+F ++P S Y ++ + A +D
Sbjct: 304 LEAVKLFSRMFSAGIKP---SEYTIVGVLNACSD 334
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 190/314 (60%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
++D+ + I Y+K D SAR LFD R W+V+ISGYA+ G +EAL +F
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M KPD ++SL+S C + G+L+ KW+D + ALIDM +KCG
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
++ A +F+ P++ + ++ +MI G +++G +A+ LF+KM++ P++ F +L
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
AC+H +E+G YF MK Y++ P +HY+CMVDLL R G+L+EA EL+++M + A
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDA 527
Query: 283 SAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKM 342
WGALL ACK + V++ E A LF LEP+ ++PYV +++IYAAA W + +++ M
Sbjct: 528 GIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIM 587
Query: 343 KERGLRKLPGCSWI 356
K+R ++K PG S I
Sbjct: 588 KQRNIKKYPGESVI 601
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 3/192 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV T +D + K + A +F++ P+RDA W+ ++SG+ Q+G ++A +F+ M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
L + PD +++L+ + S +L L + + + +D+ Q V I KCG++
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV-QVTVANTWISTYGKCGDL 204
Query: 165 DRANKLFEEMPK--RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
D A +FE + + R + S+ SM + S+ G A A GL+ ML E PD + F +
Sbjct: 205 DSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAA 264
Query: 223 ACSHGRLVEEGK 234
+C + + +G+
Sbjct: 265 SCQNPETLTQGR 276
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 49/249 (19%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSF-------- 49
+A+ +F M R SW M+ G + GD+ A +F M + D+V+
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ID Y+K G I AR +FD P++ W+
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWT 428
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+GYA NG+ EALK+F M ++ KP+ ++++ AC+ G+L+ W ++ +
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE-KGWEYFHIMKQ 487
Query: 142 SIDI--GQTHVVAALIDMNAKCGNMDRANKLFEEM-PKRDLFSYCSMIQGLSIH---GYA 195
+I G H + ++D+ + G ++ A +L M K D + +++ IH A
Sbjct: 488 VYNISPGLDH-YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIA 546
Query: 196 EQAV-GLFN 203
EQA LFN
Sbjct: 547 EQAAESLFN 555
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 248 bits (633), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 214/396 (54%), Gaps = 42/396 (10%)
Query: 2 NAKRVFVQMPERNLTS--WNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDG---- 55
+A++VF + P+ + S +NA++ G + +A +F M E V +V + G
Sbjct: 106 DARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPL 165
Query: 56 -----------------------------------YAKVGDIASARALFDKAPKRDAFLW 80
Y K G + + R LFD+ P + W
Sbjct: 166 CTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITW 225
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISGY+QNGL + L++++ M+ V PD + +VS++S+C+ +G + V L +
Sbjct: 226 NAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVG-KLVE 284
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S+ + V A I M A+CGN+ +A +F+ MP + L S+ +MI +HG E +
Sbjct: 285 SNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLM 344
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF+ M+ G+ PD A F ++L+ACSH L ++G F MK +Y + P PEHY+C+VDLL
Sbjct: 345 LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL 404
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R+G+L EA E ++SMPVE + WGALLGACK + V++ E+ ++ E EP N YV
Sbjct: 405 GRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYV 464
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L+S+IY+ + + ++ M+ER RK PG S++
Sbjct: 465 LMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 144/308 (46%), Gaps = 34/308 (11%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
A++ K G + +ARKVF++ P+ +S
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVC---------------------------- 123
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
++ LISGY N +A +F+ M+ V D M+ L+ C+ L L + +
Sbjct: 124 -YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ +D + V+ + I M KCG+++ +LF+EMP + L ++ ++I G S +G A
Sbjct: 183 VKGGLD-SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV 241
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ L+ +M + G+ PD +L++C+H + G + ++S VP+ +
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASIS 300
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE--LEPENS 316
+ +R G L +A + MPV+S S W A++G +G E+G ++ + + + + P+ +
Sbjct: 301 MYARCGNLAKARAVFDIMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGA 359
Query: 317 SPYVLLSS 324
++LS+
Sbjct: 360 VFVMVLSA 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+V + A L +E++ +++ M PD + ++ +C+ + + + C+++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYC--SMIQGLSIHGYAEQ 197
+ + + V+ ALI M KCG + A K+FEE P+ S C ++I G + +
Sbjct: 81 KGGCET-EPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSM 246
A +F +M G+ D+ ++ C+ HG+ V+ G + S+ ++
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG------LDSEVAV 193
Query: 247 VPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ S + + + G ++ L MPV+ + W A++
Sbjct: 194 LNS------FITMYMKCGSVEAGRRLFDEMPVKGLIT-WNAVI 229
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 192/333 (57%), Gaps = 4/333 (1%)
Query: 28 GGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGY 87
GG++I+A KVFD+MPER+ V++ VMI G +GD A +K P R W+ +I GY
Sbjct: 5 GGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGY 64
Query: 88 AQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
A+ P EA+ +F M + +KP+E +++++ A +G+L + V Y+ +
Sbjct: 65 ARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPC 124
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMP--KRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V +LID AKCG + A K F E+P +++L S+ +MI +IHG ++AV +F
Sbjct: 125 DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKD 184
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEG-KHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
M GL P+ +L ACSHG L EE +F TM ++Y + P +HY C+VD+L R
Sbjct: 185 MERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRK 244
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G+L+EA ++ +P+E A W LLGAC Y + EL E V +L ELE + YVL+S
Sbjct: 245 GRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMS 304
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+I+ ++LD + +M RG+ KLPG S +
Sbjct: 305 NIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 204/338 (60%), Gaps = 2/338 (0%)
Query: 20 AMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL 79
+++ K G + +A++ FD+M +D+ +T +I GYAK+GD+ +A LF + P+++
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ LI+GY + G N AL +F+ M + VKP+++ S + A + + +L K + Y+
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQA 198
++++ V+++LIDM +K G+++ + ++F K D + +MI L+ HG +A
Sbjct: 339 RTNVRPNAI-VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKA 397
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ + + M+ + P+ VIL ACSH LVEEG +FE+M ++ +VP EHYAC++D
Sbjct: 398 LRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLID 457
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LL R+G KE ++ MP E W A+LG C+ +G ELG+ A+ L +L+PE+S+P
Sbjct: 458 LLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAP 517
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
Y+LLSSIYA +W V ++ MK+R + K SWI
Sbjct: 518 YILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWI 555
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 161/341 (47%), Gaps = 39/341 (11%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++G +K G I+A KVFD M R++ S+ M+ GY K G + AR +FD P+RD
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV---- 134
W+ ++ GYAQ+G +EAL ++ +K +E+ L++AC + L L +
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 135 -------DCYLSQSSID-------------------IGQTHVVAALIDMNAKCGNMDRAN 168
+ LS S ID + H+ LI AK G+M+ A
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
KLF EMP+++ S+ ++I G G +A+ LF KM+ G+ P+ F+ L A +
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
+ GK M + ++ P+ + ++D+ S+SG L+ + + + + W +
Sbjct: 326 SLRHGKEIHGYM-IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTM 384
Query: 289 LGACKFYGEVELGEIVANRL-----FELEPENSSPYVLLSS 324
+ A +G LG L F ++P ++ V+L++
Sbjct: 385 ISALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVVILNA 422
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 43/277 (15%)
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
KR + +S +A ++A+ + + ++ ++ SL+ C +L KW
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG----- 188
+ +L + T + LI M KCG A K+F++M R+L+S+ +M+ G
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 189 ---------------------LSIHGYAE-----QAVGLFNKMLNEGLIPDNAAFTVILT 222
+ GYA+ +A+ + + G+ + +F +LT
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 223 ACSHGRLVEEGKH-YFETMKSKY--SMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
AC R ++ + + + + + + ++V S ++D ++ GQ++ A M V+
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLS----CSIIDAYAKCGQMESAKRCFDEMTVK 243
Query: 280 SHASAWGALLGACKFYGEVELGEIVANRLFELEPENS 316
W L+ G++E E +LF PE +
Sbjct: 244 D-IHIWTTLISGYAKLGDMEAAE----KLFCEMPEKN 275
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 207/339 (61%), Gaps = 2/339 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ +K A ++FD M + VV++ ++ GY + G++ +A F+ P+++
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ +ISG Q L EA+++F M+ V D M+S+ SAC +G LDLAKW+ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ ++ I + + L+DM ++CG+ + A +F + RD+ ++ + I +++ G AE+
Sbjct: 496 IEKNGIQL-DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
A+ LF+ M+ +GL PD AF LTACSHG LV++GK F +M + + P HY CMV
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
DLL R+G L+EA +L++ MP+E + W +LL AC+ G VE+ A ++ L PE +
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLLS++YA+A +W D++ V+ MKE+GLRK PG S I
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 138/277 (49%), Gaps = 18/277 (6%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
+D+ ++ YA+ G++ SAR +FD+ +R+ W+ +I GYA+ +A+ +F M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 104 -ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
V P+ MV ++SAC+++ +L+ + V ++ S I++ +V+AL+DM KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL-MVSALVDMYMKCN 285
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+D A +LF+E +L +M G +A+G+FN M++ G+ PD + ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHY----ACMVDLLSRSGQLKEAYELLKSMPV 278
+CS R + GK Y + E + ++D+ + + A+ + M
Sbjct: 346 SCSQLRNILWGKSCH-----GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 279 ESHASAWGALLGACKFYGEVELGEI-VANRLFELEPE 314
++ + W +++ G VE GE+ A FE PE
Sbjct: 401 KTVVT-WNSIVA-----GYVENGEVDAAWETFETMPE 431
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGG------------------------------- 29
D+A++VF +M ERN+ SW +M+ G +
Sbjct: 186 DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 30 -----DLINARKVF----DDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
DL KV+ + E + + + ++D Y K I A+ LFD+ + L
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ + S Y + GL EAL +F M V+PD M+S +S+CSQ+ N+ K Y+ +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ + ++ ALIDM KC D A ++F+ M + + ++ S++ G +G + A
Sbjct: 366 NGFE-SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
F M + ++ ++ I++ G L EE F +M+S+
Sbjct: 425 TFETMPEKNIV----SWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 112/208 (53%), Gaps = 12/208 (5%)
Query: 43 ERDVVSFTVMIDGYAKVG---DIASARALFDKAPKR-DAFLWSVLISGYAQNGLPNEALK 98
+ DV + T ++ ++G ++ A+ +F+ + F+++ LI GYA +GL NEA+
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH---VVAALI 155
+F M + PD+Y +SAC++ AK + + +G V +L+
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAK----SRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 156 DMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML-NEGLIPDN 214
A+CG +D A K+F+EM +R++ S+ SMI G + +A+ AV LF +M+ +E + P++
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNS 236
Query: 215 AAFTVILTACSHGRLVEEGKHYFETMKS 242
+++AC+ +E G+ + +++
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRN 264
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 45/264 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
D A F MPE+N+ SWN ++ GLV+G A +VF M +
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 45 ------------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
DV T ++D +++ GD SA ++F+ RD W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV-DCYLS 139
+ I A G A+++F M +KPD V ++ACS G + K + L
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQA 198
+ H ++D+ + G ++ A +L E+MP + + + S++ + G E A
Sbjct: 600 LHGVSPEDVH-YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Query: 199 VGLFNKMLNEGLIPDNAAFTVILT 222
K+ + L P+ V+L+
Sbjct: 659 AYAAEKI--QVLAPERTGSYVLLS 680
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 206/338 (60%), Gaps = 1/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N M+ V G LI A ++F M DVV++ MI G+AK G I A+ LFD+ P+R+
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV 224
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +ISG+ +NG +AL +F+ M+ +VKPD + MVSL++AC+ +G + +W+ Y+
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ ++ VV ALIDM KCG ++ +FE PK+ L + SMI GL+ +G+ E+A
Sbjct: 285 VRNRFELNSI-VVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERA 343
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ LF+++ GL PD+ +F +LTAC+H V +F MK KY + PS +HY MV+
Sbjct: 344 MDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVN 403
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+L +G L+EA L+K+MPVE W +LL AC+ G VE+ + A L +L+P+ +
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCG 463
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLLS+ YA+ + + + MKER + K GCS I
Sbjct: 464 YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 40/238 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-------------- 46
D A+ +F +MP+RN SWN+M+ G V+ G +A +F +M E+DV
Sbjct: 209 DQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNAC 268
Query: 47 -------------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ T +ID Y K G I +F+ APK+ W+
Sbjct: 269 AYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWN 328
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I G A NG A+ +F +E ++PD + +++AC+ G + A + +
Sbjct: 329 SMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEK 388
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQA 198
+ ++++ G ++ A L + MP + D + S++ G E A
Sbjct: 389 YMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 210/359 (58%), Gaps = 4/359 (1%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+R+F MPERN+ SWNAM+ G + + A ++F MPERD S+ MI G+ +
Sbjct: 219 DEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR 278
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLM 119
++ A LFD+ P+++ W+ +I+GY +N EAL +F M +VKP+ VS++
Sbjct: 279 EMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE--MPKR 177
SACS + L + + +S+S + V +AL++M +K G + A K+F+ + +R
Sbjct: 339 SACSDLAGLVEGQQIHQLISKS-VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF 237
DL S+ SMI + HG+ ++A+ ++N+M G P + +L ACSH LVE+G +F
Sbjct: 398 DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFF 457
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ + S+ EHY C+VDL R+G+LK+ + S +GA+L AC + E
Sbjct: 458 KDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNE 517
Query: 298 VELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
V + + V ++ E +++ YVL+S+IYAA + + + ++ KMKE+GL+K PGCSW+
Sbjct: 518 VSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 154/301 (51%), Gaps = 49/301 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A +F +MPERN+ SWN+MV LV+ G + A +F+ MP RDVVS+T M+DG AK G
Sbjct: 157 DKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNG 216
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+ AR LFD P+R+ W+ +I+GYAQN +EA ++FQ M P+
Sbjct: 217 KVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM------PER-------- 262
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALI---DMNAKCGNMDRANKLFEEMPKR 177
D A W ++ I +MN CG LF+ MP++
Sbjct: 263 --------DFASW--------------NTMITGFIRNREMNKACG-------LFDRMPEK 293
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHY 236
++ S+ +MI G + E+A+ +F+KML +G + P+ + IL+ACS + EG+
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI 353
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKS-MPVESHASAWGALLGACKFY 295
+ + SK + + ++++ S+SG+L A ++ + + + +W +++ +
Sbjct: 354 HQLI-SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Query: 296 G 296
G
Sbjct: 413 G 413
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 23/313 (7%)
Query: 3 AKRVFVQMPER-NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
A+ +F ++ R N+ +W AMV G ++ L A +F +MPER+VVS+ MIDGYA+ G
Sbjct: 96 ARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGR 155
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
I A LFD+ P+R+ W+ ++ Q G +EA+ +F+ M + D +++
Sbjct: 156 IDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDG 211
Query: 122 CSQVGNLDLAKWV-DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
++ G +D A+ + DC ++ I A+I A+ +D A++LF+ MP+RD
Sbjct: 212 LAKNGKVDEARRLFDCMPERNIISWN------AMITGYAQNNRIDEADQLFQVMPERDFA 265
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
S+ +MI G + +A GLF++M + +I ++T ++T + EE + F M
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVI----SWTTMITGYVENKENEEALNVFSKM 321
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS---AWGALLGACKFYGE 297
S+ P+ Y ++ S L E ++ + + H ALL GE
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 298 VELGEIVANRLFE 310
+ I A ++F+
Sbjct: 382 L----IAARKMFD 390
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 142/274 (51%), Gaps = 28/274 (10%)
Query: 21 MVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR-DAFL 79
++G L K G + ARK+FD +PERDVV++T +I GY K+GD+ AR LFD+ R +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ ++SGY ++ + A +FQ M NV +++ +Q G +D A + +
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDGYAQSGRIDKALELFDEMP 167
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+ +I + +V AL+ + G +D A LFE MP+RD+ S+ +M+ GL+ +G ++A
Sbjct: 168 ERNI-VSWNSMVKALV----QRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEAR 222
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH----YAC 255
LF+ M +I NA ++T + ++E F+ M PE +
Sbjct: 223 RLFDCMPERNIISWNA----MITGYAQNNRIDEADQLFQVM---------PERDFASWNT 269
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
M+ R+ ++ +A L MP E + +W ++
Sbjct: 270 MITGFIRNREMNKACGLFDRMP-EKNVISWTTMI 302
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 191/306 (62%), Gaps = 1/306 (0%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
+I+ Y + D+ SAR +FD+ + ++ +I+GYA+ PNEAL +F+ M+ +KP
Sbjct: 169 TLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+E ++S++S+C+ +G+LDL KW+ Y + S V ALIDM AKCG++D A +
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF-CKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
FE+M +D ++ +MI + HG AE+++ +F +M +E + PD F +L ACSH V
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
EEG+ YF M SK+ +VPS +HY MVDLLSR+G L++AYE + +P+ W LL
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKL 350
AC + ++L E V+ R+FEL+ + YV+LS++YA +W V ++ MK+R K+
Sbjct: 408 ACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKV 467
Query: 351 PGCSWI 356
PGCS I
Sbjct: 468 PGCSSI 473
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
++ AR LF+ + D +++ + GY++ P E +F + + PD Y SL+ A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C+ L+ + + C + +D +V LI+M +C ++D A +F+ + + +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLD-DNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
Y +MI G + +A+ LF +M + L P+ +L++C+ ++ GK +
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK-WIHKYA 256
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
K+S + ++D+ ++ G L +A + + M + AW A++ A +G+ E
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKD-TQAWSAMIVAYANHGKAEKS 315
Query: 302 EIVANRLFELEPENSSP 318
++ R + EN P
Sbjct: 316 MLMFER---MRSENVQP 329
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +ID +AK G + A ++F+K +D WS +I YA +G +++ +F+ M NV+
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV---AALIDMNAKCGNMDR 166
PDE + L++ACS G ++ + Y SQ G + +++D+ ++ GN++
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRK---YFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 167 ANKLFEEMP 175
A + +++P
Sbjct: 386 AYEFIDKLP 394
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC---GNMDRANKLFE 172
+ L+S C+ + L + Y +S I+ VA LI+ + +M A LFE
Sbjct: 33 ILLISKCNSLREL---MQIQAYAIKSHIE--DVSFVAKLINFCTESPTESSMSYARHLFE 87
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
M + D+ + SM +G S + LF ++L +G++PDN F +L AC+ + +EE
Sbjct: 88 AMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEE 147
Query: 233 GKH 235
G+
Sbjct: 148 GRQ 150
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 189/305 (61%), Gaps = 1/305 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
I Y K G+ +AR +FD+ P+R W+ +I G G NEA+++F M+ ++PD
Sbjct: 158 FITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPD 217
Query: 112 EYIMVSLMSACSQVGNLDLA-KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
++ MVS+ ++C +G+L LA + C L + + ++ +LIDM KCG MD A+ +
Sbjct: 218 DFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHI 277
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
FEEM +R++ S+ SMI G + +G +A+ F +M G+ P+ F +L+AC HG LV
Sbjct: 278 FEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLV 337
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
EEGK YF MKS++ + P HY C+VDLLSR GQLKEA ++++ MP++ + WG L+G
Sbjct: 338 EEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMG 397
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKL 350
C+ +G+VE+ E VA + ELEP N YV+L+++YA W DV V+ MK + + K+
Sbjct: 398 GCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKI 457
Query: 351 PGCSW 355
P S+
Sbjct: 458 PAYSY 462
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
+NA++VF + PER L SWNA++GGL G A ++F DM
Sbjct: 169 ENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC 228
Query: 43 -----------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL 79
+ D++ +ID Y K G + A +F++ +R+
Sbjct: 229 GGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS 288
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK-WVDCYL 138
WS +I GYA NG EAL+ F+ M V+P++ V ++SAC G ++ K +
Sbjct: 289 WSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMK 348
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQ 197
S+ ++ G +H ++D+ ++ G + A K+ EEMP K ++ + ++ G G E
Sbjct: 349 SEFELEPGLSH-YGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEM 407
Query: 198 A 198
A
Sbjct: 408 A 408
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
GDI +R L D+ P AFLW+ ++ Y ++ P +A++++ GM V PD Y + ++
Sbjct: 68 GDIFRSRIL-DQYPI--AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
A Q+ + L K + + +G + I + K G + A K+F+E P+R L
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGF-VGDEFCESGFITLYCKAGEFENARKVFDENPERKL 183
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
S+ ++I GL+ G A +AV +F M GL PD+ + +C
Sbjct: 184 GSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC 228
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
D A +F +M +RN+ SW++M+ G G+ + A + F M E V ++F ++
Sbjct: 272 DLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSAC 331
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGY-------AQNGLPNEALKIFQGMELMNVK 109
G + + F A + F +S Y +++G EA K+ +E M +K
Sbjct: 332 VHGGLVEEGKTYF--AMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV---VEEMPMK 386
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ-SSIDIGQTHVVAALIDMNAKCGNMDRAN 168
P+ + LM C + G++++A+WV Y+ + + G V+A + + +++R
Sbjct: 387 PNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVR 446
Query: 169 KLF--EEMPKRDLFSYCS 184
KL +++ K +SY S
Sbjct: 447 KLMKTKKVAKIPAYSYAS 464
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 204/333 (61%), Gaps = 7/333 (2%)
Query: 22 VGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
VG V G ++ R+ F D + S +ID Y K + +AR LF+ + R+ +W+
Sbjct: 228 VGKCVHG---VSIRRSFIDQSDYLQAS---IIDMYVKCRLLDNARKLFETSVDRNVVMWT 281
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LISG+A+ EA +F+ M ++ P++ + +++ +CS +G+L K V Y+ ++
Sbjct: 282 TLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN 341
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
I++ + + IDM A+CGN+ A +F+ MP+R++ S+ SMI I+G E+A+
Sbjct: 342 GIEMDAVNF-TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDC 400
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F+KM ++ ++P++ F +L+ACSH V+EG FE+M Y +VP EHYACMVDLL
Sbjct: 401 FHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLG 460
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G++ EA + +MPV+ ASAWGALL AC+ + EV+L +A +L +EPE SS YVL
Sbjct: 461 RAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVL 520
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
LS+IYA A W V+ V+ KM +G RK G S
Sbjct: 521 LSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 149/300 (49%), Gaps = 7/300 (2%)
Query: 20 AMVG-GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
A VG GL++ G LI+ + + + + D V+ + +++ YA++G + SA+ +FD+ P R++
Sbjct: 118 ACVGLGLLENGILIHGLAMKNGLDKDDYVAPS-LVEMYAQLGTMESAQKVFDEIPVRNSV 176
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
LW VL+ GY + E ++F M + D ++ L+ AC V + K V
Sbjct: 177 LWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVS 236
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ S ++ A++IDM KC +D A KLFE R++ + ++I G + A +A
Sbjct: 237 IRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEA 296
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
LF +ML E ++P+ IL +CS + GK M + + ++ +D
Sbjct: 297 FDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM-IRNGIEMDAVNFTSFID 355
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+ +R G ++ A + MP E + +W +++ A +G L E + +++ +N P
Sbjct: 356 MYARCGNIQMARTVFDMMP-ERNVISWSSMINA---FGINGLFEEALDCFHKMKSQNVVP 411
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAP--KRDAFLWSVLISGYAQNGLP--NEALK 98
E +VV + + + Y + + A + F++ P KR+ W+ ++SGY+++ ++ L
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
++ M D + +V + AC +G L+ + ++ +D +V +L++M
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLD-KDDYVAPSLVEMY 154
Query: 159 AKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
A+ G M+ A K+F+E+P R+ + +++G + + LF M + GL D
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 219 VILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
++ AC + + GK + + S A ++D+ + L A +L ++ V
Sbjct: 215 CLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SV 273
Query: 279 ESHASAWGALL 289
+ + W L+
Sbjct: 274 DRNVVMWTTLI 284
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 189/309 (61%), Gaps = 4/309 (1%)
Query: 52 MIDGYAKVGDIASARALFDK-APK-RDAFLWSVLISGYAQNGLPNEALKIFQGM--ELMN 107
+ID YAK + +ARA+FD +PK RD W+V+I GY+Q+G N+AL++ M E
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
+P+ + + + AC+ + L + K + Y ++ + V LIDM AKCG++ A
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
+F+ M ++ ++ S++ G +HGY E+A+G+F++M G D V+L ACSH
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
++++G YF MK+ + + P PEHYAC+VDLL R+G+L A L++ MP+E W A
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVA 652
Query: 288 LLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
L C+ +G+VELGE A ++ EL + Y LLS++YA A +W DV+ +++ M+ +G+
Sbjct: 653 FLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGV 712
Query: 348 RKLPGCSWI 356
+K PGCSW+
Sbjct: 713 KKRPGCSWV 721
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 159/306 (51%), Gaps = 19/306 (6%)
Query: 13 RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKA 72
+N+ N +V K G + A VF +M +DVVS+ M+ GY+++G A LF+K
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 73 P----KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
K D WS ISGYAQ GL EAL + + M +KP+E ++S++S C+ VG L
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 129 DLAKWVDCYLSQSSIDI------GQTHVVAALIDMNAKCGNMDRANKLFEEM-PK-RDLF 180
K + CY + ID+ + V+ LIDM AKC +D A +F+ + PK RD+
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV--ILTACSHGRLVEEGKH-YF 237
++ MI G S HG A +A+ L ++M E AFT+ L AC+ + GK +
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF--Y 295
++++ + VP C++D+ ++ G + +A + +M ++ + W +L+ Y
Sbjct: 502 YALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNMMAKNEVT-WTSLMTGYGMHGY 559
Query: 296 GEVELG 301
GE LG
Sbjct: 560 GEEALG 565
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 14/264 (5%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDA--FLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+I Y VG ++ A +L + P DA + W+ LI Y NG N+ L +F M ++
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD Y + AC ++ ++ + LS + I V AL+ M ++C ++ A K
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHA-LSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGR 228
+F+EM D+ S+ S+I+ + G + A+ +F++M NE G PDN +L C+
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 229 LVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
GK H F M+ + C+VD+ ++ G + EA + +M V+ S W
Sbjct: 244 THSLGKQLHCFAVTS---EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS-WN 299
Query: 287 ALLGACKFYGEVELGEIVANRLFE 310
A++ G E A RLFE
Sbjct: 300 AMVAGYSQIGRFE----DAVRLFE 319
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
N+ NA+V + L +ARKVFD+M DVVS+ +I+ YAK+G
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK------------ 208
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P AL++F M +PD +V+++ C+ +G L K
Sbjct: 209 -------------------PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
+ C+ S + I V L+DM AKCG MD AN +F M +D+ S+ +M+ G S
Sbjct: 250 QLHCFAVTSEM-IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
G E AV LF KM E + D ++ ++
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 209/395 (52%), Gaps = 40/395 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV------------- 47
++A ++F ++P+R++ +W A+ G G A +F M E V
Sbjct: 163 NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 48 ------------------------SF--TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
SF T +++ YAK G + AR++FD ++D WS
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I GYA N P E +++F M N+KPD++ +V +S+C+ +G LDL +W + +
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH 342
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + ALIDM AKCG M R ++F+EM ++D+ + I GL+ +G+ + + +
Sbjct: 343 EF-LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F + G+ PD + F +L C H L+++G +F + Y++ + EHY CMVDL
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G L +AY L+ MP+ +A WGALL C+ + +L E V L LEP N+ YV
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS+IY+ +W + + V++ M ++G++K+PG SWI
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWI 556
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 131/233 (56%), Gaps = 2/233 (0%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
DV + T ++ Y+ G + A LFD+ P R W+ L SGY +G EA+ +F+ M
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM 203
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
M VKPD Y +V ++SAC VG+LD +W+ Y+ + + + V L+++ AKCG
Sbjct: 204 VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ-KNSFVRTTLVNLYAKCGK 262
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
M++A +F+ M ++D+ ++ +MIQG + + + ++ + LF +ML E L PD + L++
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
C+ ++ G+ + ++ ++ + + ++D+ ++ G + +E+ K M
Sbjct: 323 CASLGALDLGE-WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 115/229 (50%), Gaps = 17/229 (7%)
Query: 68 LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
LF + FL++ LI+G+ N L +E L +F + + + ++ AC++ +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAA---LIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
L +D L + G H VAA L+ + + G ++ A+KLF+E+P R + ++ +
Sbjct: 127 RKLG--ID--LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK---HYFETMK 241
+ G + G +A+ LF KM+ G+ PD+ +L+AC H ++ G+ Y E M+
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 242 -SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
K S V + +V+L ++ G++++A + SM VE W ++
Sbjct: 243 MQKNSFVRTT-----LVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 191/303 (63%), Gaps = 1/303 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ YA G + AR+LF++ + D W+ L++ YA + + ++ M V+P+
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN 215
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
E +V+L+ +C+ +G W Y+ ++++ + Q V +LID+ +KCG + A K+F
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ-FVGTSLIDLYSKCGCLSFARKVF 274
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+EM +RD+ Y +MI+GL++HG+ ++ + L+ ++++GL+PD+A F V ++ACSH LV+
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
EG F +MK+ Y + P EHY C+VDLL RSG+L+EA E +K MPV+ +A+ W + LG+
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 292 CKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLP 351
+ +G+ E GEI L LE ENS YVLLS+IYA ++W DV + MK+ + K P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 352 GCS 354
G S
Sbjct: 455 GIS 457
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +ID Y+K G ++ AR +FD+ +RD ++ +I G A +G E +++++ + +
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLV 314
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV--VAALIDMNAKCGNMDRA 167
PD V +SACS G +D + + + S ++ + V L+D+ + G ++ A
Sbjct: 315 PDSATFVVTISACSHSGLVD--EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 168 NKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ ++MP K + + S + HG E+ +L GL +N+ V+L+
Sbjct: 373 EECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLL--GLEFENSGNYVLLS 426
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 244 bits (624), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 219/392 (55%), Gaps = 39/392 (9%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVK------GGDLI------NARK------------ 36
++A ++F QMP+RN+ SW M+ K +L+ N R
Sbjct: 113 NDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC 172
Query: 37 ------------VFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
+ + E DV + +ID +AK+G+ A ++FD+ DA +W+ +I
Sbjct: 173 NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
G+AQN + AL++F+ M+ ++ + S++ AC+ + L+L ++ + D
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQD 292
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ + AL+DM KCG+++ A ++F +M +RD+ ++ +MI GL+ +GY+++A+ LF +
Sbjct: 293 LILNN---ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
M + G P+ +L ACSH L+E+G +YF +MK Y + P EHY CM+DLL ++G
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSS 324
+L +A +LL M E A W LLGAC+ + L E A ++ L+PE++ Y LLS+
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 325 IYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
IYA + +W V ++ +M++RG++K PGCSWI
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 123/242 (50%), Gaps = 10/242 (4%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
V+I+ Y K + A LFD+ P+R+ W+ +IS Y++ + +AL++ M NV+P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+ Y S++ +C+ + ++ + + C + + ++ V +ALID+ AK G + A +
Sbjct: 161 NVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLE-SDVFVRSALIDVFAKLGEPEDALSV 216
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F+EM D + S+I G + + ++ A+ LF +M G I + A T +L AC+ L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 231 EEG-KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
E G + + +K ++ + +VD+ + G L++A + M E W ++
Sbjct: 277 ELGMQAHVHIVKYDQDLILNNA----LVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMI 331
Query: 290 GA 291
Sbjct: 332 SG 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 75/150 (50%), Gaps = 21/150 (14%)
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
+V LI+M K ++ A++LF++MP+R++ S+ +MI S ++A+ L ML +
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 210 LIPDNAAFTVILTACS--------HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
+ P+ ++ +L +C+ H +++EG ++S ++D+ +
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSA------------LIDVFA 205
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ G+ ++A + M V A W +++G
Sbjct: 206 KLGEPEDALSVFDEM-VTGDAIVWNSIIGG 234
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 244 bits (623), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 196/329 (59%), Gaps = 6/329 (1%)
Query: 33 NARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGL 92
+A ++FD+ P+RDVV++ V+IDG K +I AR LFD P RD W+ LISGYAQ
Sbjct: 170 SALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNH 229
Query: 93 PNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA 152
EA+K+F M + +KPD +VS +SAC+Q G+ K + Y + + I + +
Sbjct: 230 CREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI-DSFLAT 288
Query: 153 ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
L+D AKCG +D A ++FE + LF++ +MI GL++HG E V F KM++ G+ P
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP 348
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
D F +L CSH LV+E ++ F+ M+S Y + +HY CM DLL R+G ++EA E+
Sbjct: 349 DGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEM 408
Query: 273 LKSMPVESHAS----AWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAA 328
++ MP + AW LLG C+ +G +E+ E ANR+ L PE+ Y ++ +YA
Sbjct: 409 IEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYAN 468
Query: 329 ADQWLDVSHVKNKM-KERGLRKLPGCSWI 356
A++W +V V+ + +++ ++K G S +
Sbjct: 469 AERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 48/259 (18%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTV----- 51
A+ +F MP R+L SWN+++ G + A K+FD+M P+ + T+
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++D YAK G I +A +F+ + F W+ +
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK-WVDCYLSQSS 142
I+G A +G + F+ M +KPD +S++ CS G +D A+ D S
Sbjct: 322 ITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYD 381
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK-----RDLFSYCSMIQGLSIHGYAEQ 197
++ H + D+ + G ++ A ++ E+MPK L ++ ++ G IHG E
Sbjct: 382 VNREMKH-YGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEI 440
Query: 198 AVGLFNKMLNEGLIPDNAA 216
A N++ + L P++
Sbjct: 441 AEKAANRV--KALSPEDGG 457
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 244 bits (623), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 201/327 (61%), Gaps = 5/327 (1%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
AR++FD+M ER+VVS+T M+ GYA+ GDI++A ALF+ P+RD W+ +++ QNGL
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 94 NEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA 152
EA+ +F+ M +++P+E +V ++SAC+Q G L LAK + + + + V
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS-SDVFVSN 299
Query: 153 ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN---EG 209
+L+D+ KCGN++ A+ +F+ K+ L ++ SMI ++HG +E+A+ +F +M+
Sbjct: 300 SLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIND 359
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
+ PD+ F +L AC+HG LV +G+ YF+ M +++ + P EHY C++DLL R+G+ EA
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEA 419
Query: 270 YELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAA 329
E++ +M +++ + WG+LL ACK +G ++L E+ L L P N +++++Y
Sbjct: 420 LEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEM 479
Query: 330 DQWLDVSHVKNKMKERGLRKLPGCSWI 356
W + + +K + K PG S I
Sbjct: 480 GNWEEARRARKMIKHQNAYKPPGWSRI 506
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 58 KVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN----VKPDEY 113
++ +++ AR +FD+ + L++ +++ Y+ + LP A F LM +P+ +
Sbjct: 69 RLCNLSYARFIFDRFSFPNTHLYAAVLTAYS-SSLPLHASSAFSFFRLMVNRSVPRPNHF 127
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
I ++ + + + V +L +S + A L + ++ A +LF+E
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE 187
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
M +R++ S+ +M+ G + G AV LF M D ++ IL AC+ L E
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPER----DVPSWNAILAACTQNGLFLEA 243
Query: 234 KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
F M ++ S+ P+ C++ +++G L+ A
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-------VSFTVMI 53
+ A VF +++LT+WN+M+ G A VF++M + ++ ++F ++
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 54 DGYAKVGDIASARALFDKAPKRDAF-----LWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+ G ++ R FD R + LI + G +EAL++ M M +
Sbjct: 372 NACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEV---MSTMKM 428
Query: 109 KPDEYIMVSLMSACSQVGNLDLAK 132
K DE I SL++AC G+LDLA+
Sbjct: 429 KADEAIWGSLLNACKIHGHLDLAE 452
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 206/395 (52%), Gaps = 40/395 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
+ A+++F M ERN+ SWN+M+ V+ + A +F M +
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 44 ----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
R+V +I Y K ++ +A ++F K R W+
Sbjct: 348 ADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWN 407
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I G+AQNG P +AL F M VKPD + VS+++A +++ AKW+ + +S
Sbjct: 408 AMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+D V AL+DM AKCG + A +F+ M +R + ++ +MI G HG+ + A+ L
Sbjct: 468 CLD-KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M + P+ F +++ACSH LVE G F MK YS+ S +HY MVDLL
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G+L EA++ + MPV+ + +GA+LGAC+ + V E A RLFEL P++ +VL
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVL 646
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L++IY AA W V V+ M +GLRK PGCS +
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 169/377 (44%), Gaps = 53/377 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD-------VVSF---- 49
+ A++VF +MPER+L SWN +V G + G A ++ M E + +VS
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV 246
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
T ++D YAK G + +AR LFD +R+ W+
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWN 306
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I Y QN P EA+ IFQ M VKP + ++ + AC+ +G+L+ + ++ +
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR----FIHKL 362
Query: 142 SIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
S+++G VV +LI M KC +D A +F ++ R L S+ +MI G + +G A
Sbjct: 363 SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ F++M + + PD + ++TA + + K + + + + + +VD
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK-WIHGVVMRSCLDKNVFVTTALVD 481
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+ ++ G + A L+ M E H + W A++ YG G+ E++ P
Sbjct: 482 MYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDG---YGTHGFGKAALELFEEMQKGTIKP 537
Query: 319 --YVLLSSIYAAADQWL 333
LS I A + L
Sbjct: 538 NGVTFLSVISACSHSGL 554
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ + T + + YAK + AR +FD+ P+RD W+ +++GY+QNG+ AL++ + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
N+KP +VS++ A S + + + K + Y +S D ++ AL+DM AKCG++
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD-SLVNISTALVDMYAKCGSL 287
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ A +LF+ M +R++ S+ SMI + ++A+ +F KML+EG+ P + + L AC
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 225 SHGRLVEEGK 234
+ +E G+
Sbjct: 348 ADLGDLERGR 357
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 5/243 (2%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ + + G + A +F+ + L+ ++ G+A+ ++AL+ F M +V+
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P Y L+ C L + K + L +S + + L +M AKC ++ A K
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL-DLFAMTGLENMYAKCRQVNEARK 191
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+ MP+RDL S+ +++ G S +G A A+ + M E L P +L A S RL
Sbjct: 192 VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 230 VEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
+ GK + M+S + + + +VD+ ++ G L+ A +L M +E + +W ++
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNIS--TALVDMYAKCGSLETARQLFDGM-LERNVVSWNSM 308
Query: 289 LGA 291
+ A
Sbjct: 309 IDA 311
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 203/328 (61%), Gaps = 5/328 (1%)
Query: 30 DLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ 89
D +ARK+FD+MP +++V++ ++D YAK GD+ SAR +FD+ +RD WS +I GY +
Sbjct: 904 DQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVK 963
Query: 90 NGLPNEALKIF-QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
G N+AL+IF Q M + + K +E MVS++ AC+ +G L+ K V Y+ + +
Sbjct: 964 RGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPL-TV 1022
Query: 149 HVVAALIDMNAKCGNMDRANKLF--EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ +LIDM AKCG++ A +F + + D + ++I GL+ HG+ +++ LF+KM
Sbjct: 1023 ILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR 1082
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
+ PD F +L ACSHG LV+E H+F+++K P EHYACMVD+LSR+G +
Sbjct: 1083 ESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLV 1141
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIY 326
K+A++ + MP++ S GALL C +G +EL E V +L EL+P N YV L+++Y
Sbjct: 1142 KDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVY 1201
Query: 327 AAADQWLDVSHVKNKMKERGLRKLPGCS 354
A Q+ ++ M+++G++K+ G S
Sbjct: 1202 AINKQFRAARSMREAMEKKGVKKIAGHS 1229
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 132/303 (43%), Gaps = 41/303 (13%)
Query: 59 VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
D+ A K + W+ +I G++ + P +++ ++ M + PD L
Sbjct: 801 TSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFL 860
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSI----------------------------DIGQTHV 150
M + S++ N L + C + +S + ++ ++
Sbjct: 861 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL 920
Query: 151 VA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
V +++D AK G++ A +F+EM +RD+ ++ SMI G G +A+ +F++M+
Sbjct: 921 VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 980
Query: 209 GLIPDNAAFTV-ILTACSHGRLVEEGK---HYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
G N V ++ AC+H + GK Y + +++ ++D+ ++ G
Sbjct: 981 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS----LIDMYAKCG 1036
Query: 265 QLKEAYELLKSMPV-ESHASAWGALLGACKFYGEVELGEIVANRLFE--LEPENSSPYVL 321
+ +A+ + V E+ A W A++G +G + + +++ E ++P+ + L
Sbjct: 1037 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 1096
Query: 322 LSS 324
L++
Sbjct: 1097 LAA 1099
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 42/312 (13%)
Query: 21 MVGGLVKGGDLINARKVFDDMPERDVV----SFTVMIDGYAKVGDIASARALFDKAPKR- 75
+V K G + A ++ + + ERD+ ++ V+I G+ K I A LF+K +
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMG 313
Query: 76 ---DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
D L+ VLI G ++ AL ++ ++ + PD I+ L+
Sbjct: 314 MNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL------------- 360
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYC-SMIQGLSI 191
C S+ S T V+ ID K M LFE + DL S IQ L +
Sbjct: 361 ---CSFSEESELSRITEVIIGDID---KKSVMLLYKSLFEGFIRNDLVHEAYSFIQNL-M 413
Query: 192 HGYAEQAVGLFNKML---NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
Y V K+L N+ ++PD+ + ++++ V+ + + ++P
Sbjct: 414 GNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDI-VQNGLIP 472
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMP---VE----SHASAWGALLGACKFYGEVELG 301
P Y +++ + + G+ +E+ +LL M VE + +G L C F G ++L
Sbjct: 473 GPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL- 531
Query: 302 EIVANRLFELEP 313
+ R + EP
Sbjct: 532 -LKKMRFYGFEP 542
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 107/223 (47%), Gaps = 16/223 (7%)
Query: 14 NLTSWNAMVGGLVKGGDLINAR----KVFDDMPERDVVSFTVMIDGYAKVGDIASARALF 69
+ ++N+M+ G K G++ ++++D DV+++T +I G G + A +
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 70 DKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
++ +D + + LI G + G EAL F+ ME ++PD + +SL+S+
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSS 767
Query: 126 GNLDLAKWVD---CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
N++ + + + + + + +++A + ++D A K ++ + +
Sbjct: 768 ENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVT-----SDVDYAYKFLSKLSDPPNYGW 822
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
+I+G S E+++ ++ +ML GL+PD+ + ++ + S
Sbjct: 823 NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSS 865
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 197/332 (59%), Gaps = 1/332 (0%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
GG + +A+KVFD+M ER+VV + +MI G+ GD+ LF + +R W+ +IS
Sbjct: 148 TSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMIS 207
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
++ G EAL++F M PDE +V+++ + +G LD KW+ S +
Sbjct: 208 SLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFK 267
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
V AL+D K G+++ A +F +M +R++ S+ ++I G +++G E + LF+ M
Sbjct: 268 DFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAM 327
Query: 206 LNEGLI-PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
+ EG + P+ A F +L CS+ VE G+ F M ++ + EHY MVDL+SRSG
Sbjct: 328 IEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSG 387
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSS 324
++ EA++ LK+MPV ++A+ WG+LL AC+ +G+V+L E+ A L ++EP NS YVLLS+
Sbjct: 388 RITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSN 447
Query: 325 IYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+YA +W DV V+ MK+ LRK G S I
Sbjct: 448 LYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 31/267 (11%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A +F + +++ +I Y+ G P E+L F M+ + DEY L+ +CS
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 125 VGNLDLAKWVDCYLSQSS------IDIG----------------------QTHVVAALID 156
+ +L K V L ++ I IG + +VV +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 157 MNAKC--GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
+ C G+++R LF++M +R + S+ SMI LS G +A+ LF +M+++G PD
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 215 AAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
A +L + +++ GK T +S +VD +SG L+ A + +
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 275 SMPVESHASAWGALLGACKFYGEVELG 301
M + +W L+ G+ E G
Sbjct: 295 KMQ-RRNVVSWNTLISGSAVNGKGEFG 320
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 203/341 (59%), Gaps = 4/341 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERD--VVSFTVMIDGYAKVGDIASARALFDKAPKRD 76
NA++ + G + AR++ + +D + FT ++DGY K+GD+ A+ +F RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 77 AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
W+ +I GY Q+G EA+ +F+ M +P+ Y + +++S S + +L K +
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYA 195
+S +I V ALI M AK GN+ A++ F+ + +RD S+ SMI L+ HG+A
Sbjct: 438 SAVKSG-EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC 255
E+A+ LF ML EGL PD+ + + +AC+H LV +G+ YF+ MK ++P+ HYAC
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN 315
MVDL R+G L+EA E ++ MP+E WG+LL AC+ + ++LG++ A RL LEPEN
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 316 SSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S Y L+++Y+A +W + + ++ MK+ ++K G SWI
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 120/232 (51%), Gaps = 33/232 (14%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G ++ARK+FD+MP R S+ ++ Y+K GD+ S FD+ P+RD+ W+ +I G
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Y G ++A+++ M ++P ++ + +++++ + ++ K V ++ + + G
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR-G 179
Query: 147 QTHVVAALIDMNAKCGN-------------------------------MDRANKLFEEMP 175
V +L++M AKCG+ MD A FE+M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTACSH 226
+RD+ ++ SMI G + GY +A+ +F+KML + L+ PD +L+AC++
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 157/358 (43%), Gaps = 71/358 (19%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
N++ N+++ K GD + A+ VFD M RD+ S+ MI + +VG + A A F++
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAK 132
+RD W+ +ISG+ Q G AL IF M + + PD + + S++SAC+ + L + K
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE------------------- 173
+ ++ + DI V+ ALI M ++CG ++ A +L E+
Sbjct: 300 QIHSHIVTTGFDISGI-VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 174 --------------MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
+ RD+ ++ +MI G HG +A+ LF M+ G P++
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 220 ILTACS-----------HGRLVEEGKHY-------FETMKSKYSMVPSPEH--------- 252
+L+ S HG V+ G+ Y TM +K + S
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 253 ----YACMVDLLSRSGQLKEAYELLKSMPVES----HASAWGALLGACKFYGEVELGE 302
+ M+ L++ G +EA EL ++M +E H + G + AC G V G
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG-VFSACTHAGLVNQGR 535
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 159 AKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
+K G+MD + F+++P+RD S+ +MI G G +A+ + M+ EG+ P T
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 219 VILTACSHGRLVEEGK 234
+L + + R +E GK
Sbjct: 151 NVLASVAATRCMETGK 166
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 211/381 (55%), Gaps = 32/381 (8%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-------------------- 44
RVF +P+ N+ +W +++ G V +A + F +M
Sbjct: 163 RVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCF 222
Query: 45 ----------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPN 94
+V+ T +ID YAK GD+ +AR LFD P+R W+ +I+GY+QNG
Sbjct: 223 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 282
Query: 95 EALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAAL 154
EAL +F M + + PD+ +S++ A G L + + Y+S++ + +V AL
Sbjct: 283 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGF-VKDAAIVCAL 341
Query: 155 IDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG-LIPD 213
++M AK G+ + A K FE++ K+D ++ +I GL+ HG+ +A+ +F +M +G PD
Sbjct: 342 VNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPD 401
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+ +L ACSH LVEEG+ YF M+ + + P+ EHY CMVD+LSR+G+ +EA L+
Sbjct: 402 GITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLV 461
Query: 274 KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWL 333
K+MPV+ + + WGALL C + +EL + + + + E E S YVLLS+IYA A +W
Sbjct: 462 KTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWA 521
Query: 334 DVSHVKNKMKERGLRKLPGCS 354
DV ++ MK + + K+ G S
Sbjct: 522 DVKLIRESMKSKRVDKVLGHS 542
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 119/241 (49%), Gaps = 14/241 (5%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ Y G++ +F+ P+ + W LISG+ N ++A++ F+ M+ VK
Sbjct: 146 TCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVK 205
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRAN 168
+E IMV L+ AC + C+ +G ++A +LIDM AKCG++ A
Sbjct: 206 ANETIMVDLLVACGR-----------CFDPYFQSKVGFNVILATSLIDMYAKCGDLRTAR 254
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
LF+ MP+R L S+ S+I G S +G AE+A+ +F ML+ G+ PD F ++ A
Sbjct: 255 YLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQG 314
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
+ G+ SK V +V++ +++G + A + + + + AW +
Sbjct: 315 CSQLGQS-IHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVV 372
Query: 289 L 289
+
Sbjct: 373 I 373
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 51/237 (21%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------ 43
A+ +F MPER L SWN+++ G + GD A +F DM +
Sbjct: 252 TARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASM 311
Query: 44 ---------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+D +++ YAK GD SA+ F+ K+D W+V
Sbjct: 312 IQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTV 371
Query: 83 LISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLD-----LAKWVDC 136
+I G A +G NEAL IFQ M E N PD + ++ ACS +G ++ A+ D
Sbjct: 372 VIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDL 431
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIH 192
+ + +++ H ++D+ ++ G + A +L + MP K ++ + +++ G IH
Sbjct: 432 HGLEPTVE----H-YGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH 483
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 128/259 (49%), Gaps = 15/259 (5%)
Query: 44 RDVVSFTVMID---GYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIF 100
R+V+ + +ID + +++ AR++F+ ++W+ +I GY+ + P++AL +
Sbjct: 36 RNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFY 95
Query: 101 QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAK 160
Q M PD + ++ ACS + ++ V ++ ++ ++ +V L+ M
Sbjct: 96 QEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV-NMYVSTCLLHMYMC 154
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
CG ++ ++FE++P+ ++ ++ S+I G + A+ F +M + G+ + +
Sbjct: 155 CGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDL 214
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
L AC GR + YF++ K ++++ + ++D+ ++ G L+ A L MP E
Sbjct: 215 LVAC--GRCFDP---YFQS-KVGFNVILATS----LIDMYAKCGDLRTARYLFDGMP-ER 263
Query: 281 HASAWGALLGACKFYGEVE 299
+W +++ G+ E
Sbjct: 264 TLVSWNSIITGYSQNGDAE 282
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 218/393 (55%), Gaps = 40/393 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-------PERDVVSF------ 49
A++VF M ER+L SWN M+G + A +F +M E + S
Sbjct: 107 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 166
Query: 50 --------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
T ++D YAK G I A +F+ + + WS +
Sbjct: 167 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 226
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
++GY QN EAL +++ + M+++ +++ + S++ ACS + L K + + +S
Sbjct: 227 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 286
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
V ++ +DM AKCG++ + +F E+ +++L + ++I G + H ++ + LF
Sbjct: 287 G-SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 345
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
KM +G+ P+ F+ +L+ C H LVEEG+ +F+ M++ Y + P+ HY+CMVD+L R+
Sbjct: 346 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRA 405
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G L EAYEL+KS+P + AS WG+LL +C+ Y +EL E+ A +LFELEPEN+ +VLLS
Sbjct: 406 GLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLS 465
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+IYAA QW +++ + +++ ++K+ G SWI
Sbjct: 466 NIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWI 498
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E DV V+I+ Y+K G + AR +FD +R W+ +I Y +N + +EAL IF
Sbjct: 85 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 144
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M K E+ + S++SAC + K + C ++ ID+ +V AL+D+ AKCG
Sbjct: 145 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDL-NLYVGTALLDLYAKCG 203
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ A ++FE M + ++ SM+ G + E+A+ L+ + L + + ++
Sbjct: 204 MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 263
Query: 223 ACSHGRLVEEGKHYFETM-KSKYS---MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
ACS+ + EGK + KS + V S VD+ ++ G L+E+Y + +
Sbjct: 264 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSA-----VDMYAKCGSLRESYIIFSEVQ- 317
Query: 279 ESHASAWGALLGA 291
E + W ++
Sbjct: 318 EKNLELWNTIISG 330
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 205/339 (60%), Gaps = 3/339 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPER-DVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
NA++ K G++ A K+F + ER +VS+ ++ GY G A+ LF + D
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
WS+++ YA++ PNEA+ +F+ ++ ++P+ +++L+ C+Q+ +L L + Y
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ + + G + L+D+ AKCG++ A +F+ +RDL + +M+ G ++HG ++
Sbjct: 594 IIRGGL--GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKE 651
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
A+ +++ M + PD+ T +LTAC H L+++G ++++++ + M P+ E YAC V
Sbjct: 652 ALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAV 711
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
DL++R G+L +AY + MPVE +A+ WG LL AC Y ++LG VAN L + E +++
Sbjct: 712 DLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTG 771
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+VL+S++YAA +W V ++N MK++ ++K GCSW+
Sbjct: 772 NHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 139/300 (46%), Gaps = 6/300 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKP 110
++ Y +VG I A +LF + +D W+V+I+GYA N +A ++F + +V P
Sbjct: 269 LVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSP 328
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
D ++S++ C+Q+ +L K + Y+ + S + T V ALI A+ G+ A
Sbjct: 329 DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWA 388
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F M +D+ S+ +++ + Q + L + +LNE + D+ +L C + + +
Sbjct: 389 FSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 231 EEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
+ K H + P+ ++D ++ G ++ A+++ + ++ +L
Sbjct: 449 GKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSL 508
Query: 289 LGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
L G + +++ E+ + + + L+ IYA + + V +++ RG+R
Sbjct: 509 LSGYVNSGSHDDAQML---FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 125/294 (42%), Gaps = 10/294 (3%)
Query: 7 FVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDI 62
F P+ + ++ ++ V+ GD N + + + E+D + ++ YAK G I
Sbjct: 114 FADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI 173
Query: 63 -ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
A FD +D W+ +I+G+++N + +A + F M +P+ + +++
Sbjct: 174 FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPV 233
Query: 122 CSQVGN---LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD 178
C+ + + + Y+ Q S V +L+ + G ++ A LF M +D
Sbjct: 234 CASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKD 293
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHYF 237
L S+ +I G + + +A LF+ ++++G + PD+ IL C+ + GK
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH 353
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ ++ ++ +R G AY M + S W A+L A
Sbjct: 354 SYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIIS-WNAILDA 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 121/302 (40%), Gaps = 89/302 (29%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ + GD A F M +D++S+ ++D +A +PK+ F
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA-------------DSPKQFQF 416
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
L + L NEA+ + D ++SL+ C V + K V Y
Sbjct: 417 L-------NLLHHLLNEAITL-----------DSVTILSLLKFCINVQGIGKVKEVHGYS 458
Query: 139 SQSSI--DIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQG------- 188
++ + D + + AL+D AKCGN++ A+K+F + +R L SY S++ G
Sbjct: 459 VKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSH 518
Query: 189 -------------------LSIHGYAE-----QAVGLFNKMLNEGLIPDNAAFTVILTAC 224
L + YAE +A+G+F ++ G+ P+ +L C
Sbjct: 519 DDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVC 578
Query: 225 S-----------HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+ HG ++ G ++ K ++D+ ++ G LK AY +
Sbjct: 579 AQLASLHLVRQCHGYIIRGG---LGDIRLK----------GTLLDVYAKCGSLKHAYSVF 625
Query: 274 KS 275
+S
Sbjct: 626 QS 627
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 28/266 (10%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKP 110
+++ YAK + + +F + D +W+++++G + + E ++ F+ M + KP
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKP 120
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM-DRANK 169
++ C ++G+ K + Y+ ++ ++ T V AL+ M AK G + A
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLE-KDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL-------- 221
F+ + +D+ S+ ++I G S + A F ML E P+ A +L
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 222 -TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPV 278
AC GR + H + +S + C +V R G+++EA L M
Sbjct: 240 NIACRSGRQI----HSYVVQRSWL----QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS 291
Query: 279 ESHASAWGALLGA----CKFYGEVEL 300
+ S W ++ C+++ +L
Sbjct: 292 KDLVS-WNVVIAGYASNCEWFKAFQL 316
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 215/395 (54%), Gaps = 41/395 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----RD----------- 45
D A+ +F +M +R++ W MV G + G + A + + +M RD
Sbjct: 168 DEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQAS 227
Query: 46 ------------------------VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
VV T ++D YAKVG I A +F + + A W
Sbjct: 228 GDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWG 287
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LISG+AQNGL N+A + M+ + +PD +V ++ ACSQVG+L + V CY+ +
Sbjct: 288 SLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR 347
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ T AL+DM +KCG + + ++FE + ++DL + +MI IHG ++ V L
Sbjct: 348 HVLDRVT--ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSL 405
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F KM + PD+A F +L+A SH LVE+G+H+F M +KY + PS +HY C++DLL+
Sbjct: 406 FLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLA 465
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R+G+++EA +++ S +++ W ALL C + + +G+I AN++ +L P++ L
Sbjct: 466 RAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTL 525
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+S+ +A A++W +V+ V+ M+ + K+PG S I
Sbjct: 526 VSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAI 560
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 168/374 (44%), Gaps = 65/374 (17%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTV----- 51
A++VF ++P+R ++ +N+M+ +G + +++D M P+ + T+
Sbjct: 69 ARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS 128
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+++ Y K G + A LF K KRD W+ +
Sbjct: 129 GLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTM 188
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
++G+AQ G +A++ ++ M+ D +M+ L+ A +G+ + + V YL ++ +
Sbjct: 189 VTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGL 248
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ V +L+DM AK G ++ A+++F M + S+ S+I G + +G A +A
Sbjct: 249 PMNVV-VETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVV 307
Query: 204 KMLNEGLIPDNAAFTVILTACSH------GRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
+M + G PD +L ACS GRLV H + + V + ++
Sbjct: 308 EMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLV----HCYILKRHVLDRVTA----TALM 359
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF------EL 311
D+ S+ G L + E+ + + W ++ +G + E+V+ LF +
Sbjct: 360 DMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQ--EVVS--LFLKMTESNI 414
Query: 312 EPENSSPYVLLSSI 325
EP++++ LLS++
Sbjct: 415 EPDHATFASLLSAL 428
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 146/315 (46%), Gaps = 42/315 (13%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
+R++T +A V + G+L+N + D+ I ++G+I+ AR +FD+
Sbjct: 30 KRHITQIHAFV---ISTGNLLNGSSISRDL-----------IASCGRIGEISYARKVFDE 75
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
P+R +++ +I Y++ P+E L+++ M ++PD + AC L+
Sbjct: 76 LPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKG 135
Query: 132 KWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
+ V C ++D G V ++++++ KCG MD A LF +M KRD+ + +M+ G
Sbjct: 136 EAVWC----KAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTG 191
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA------CSHGRLVEEGKHYFETMKS 242
+ G + +AV + +M NEG D +L A GR V + + T
Sbjct: 192 FAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVH--GYLYRTGLP 249
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
+V + +VD+ ++ G ++ A + M ++ A +WG+L+ G
Sbjct: 250 MNVVVETS-----LVDMYAKVGFIEVASRVFSRMMFKT-AVSWGSLISGFAQNG------ 297
Query: 303 IVANRLFELEPENSS 317
+AN+ FE E S
Sbjct: 298 -LANKAFEAVVEMQS 311
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 218/394 (55%), Gaps = 40/394 (10%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-ERDVVSFT---------- 50
NA +VF +MP R++ SW ++ G + G A F M E ++ ++
Sbjct: 159 NACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVG 218
Query: 51 -------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
+ID Y K ++ A +F + K+D W+ +IS
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 86 GYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
G EA+ +F M+ + +KPD +I+ S++SAC+ +G +D +WV Y+ + I
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
TH+ A++DM AKCG ++ A ++F + +++F++ +++ GL+IHG+ +++ F +
Sbjct: 339 -WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEE 397
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK-YSMVPSPEHYACMVDLLSRS 263
M+ G P+ F L AC H LV+EG+ YF MKS+ Y++ P EHY CM+DLL R+
Sbjct: 398 MVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRA 457
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEV-ELGEIVANRLFELEPENSSPYVLL 322
G L EA EL+K+MPV+ GA+L ACK G + EL + + + ++E E+S YVLL
Sbjct: 458 GLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLL 517
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S+I+AA +W DV+ ++ MK +G+ K+PG S+I
Sbjct: 518 SNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 27/257 (10%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y G+ +A +F + P RD W+ +I+G+ + GL EAL F M+ V+P+
Sbjct: 147 LVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPN 203
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYL----SQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
V ++ + +VG L L K + + S S++ G ALIDM KC + A
Sbjct: 204 LATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN-----ALIDMYVKCEQLSDA 258
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACS- 225
++F E+ K+D S+ SMI GL +++A+ LF+ M + G+ PD T +L+AC+
Sbjct: 259 MRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACAS 318
Query: 226 -----HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
HGR V E Y T K+ +VD+ ++ G ++ A E+ +
Sbjct: 319 LGAVDHGRWVHE---YILTAGIKWDTHIG----TAIVDMYAKCGYIETALEIFNGIR-SK 370
Query: 281 HASAWGALLGACKFYGE 297
+ W ALLG +G
Sbjct: 371 NVFTWNALLGGLAIHGH 387
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 14/261 (5%)
Query: 31 LINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR--DAFLWSVLISGYA 88
LI + DD+ VV+F K D AS ++ + + +F ++ L+S YA
Sbjct: 29 LITRDLLRDDLIINKVVTF------LGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYA 82
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
P + ++ PD + + AC + + K + +++
Sbjct: 83 VCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGF-YDDI 141
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+V +L+ CG A K+F EMP RD+ S+ +I G + G ++A+ F+KM E
Sbjct: 142 YVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE 201
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKE 268
P+ A + +L + + GK + + S++ S E ++D+ + QL +
Sbjct: 202 ---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI-SLETGNALIDMYVKCEQLSD 257
Query: 269 AYELLKSMPVESHASAWGALL 289
A + + + S W +++
Sbjct: 258 AMRVFGELEKKDKVS-WNSMI 277
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGY 56
+ A +F + +N+ +WNA++GGL G + + + F++M + ++V+F ++
Sbjct: 358 ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC 417
Query: 57 AKVGDIASARALFDKAPKRDAFL------WSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
G + R F K R+ L + +I + GL +EAL++ + M VKP
Sbjct: 418 CHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP---VKP 474
Query: 111 DEYIMVSLMSACSQVGNL-DLAKWV-DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
D I +++SAC G L +L K + D +L D G +++ + N + ++ R
Sbjct: 475 DVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIR 534
Query: 169 KLFE 172
+L +
Sbjct: 535 RLMK 538
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 191/336 (56%), Gaps = 8/336 (2%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
G + G I+A + + + V + +ID Y K + A+ +FD+ +++ W+ +
Sbjct: 284 GAINEGKQIHACIIRTNFQDHIYVG-SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAM 342
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
+ GY Q G EA+KIF M+ + PD Y + +SAC+ V +L+ +I
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS----QFHGKAI 398
Query: 144 DIGQTHVVA---ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
G H V +L+ + KCG++D + +LF EM RD S+ +M+ + G A + +
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF+KM+ GL PD T +++ACS LVE+G+ YF+ M S+Y +VPS HY+CM+DL
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
SRSG+L+EA + MP A W LL AC+ G +E+G+ A L EL+P + + Y
Sbjct: 519 SRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYT 578
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LLSSIYA+ +W V+ ++ M+E+ ++K PG SWI
Sbjct: 579 LLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 141/273 (51%), Gaps = 12/273 (4%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G + +A+KVF + +R+ V + ++ G G I A LF + ++D+ W+ +I G A
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLA 246
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
QNGL EA++ F+ M++ +K D+Y S++ AC +G ++ K + + +++
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ-DHI 305
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
+V +ALIDM KC + A +F+ M ++++ S+ +M+ G G AE+AV +F M
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC----MVDLLSRSG 264
G+ PD+ ++AC++ +EEG + ++ HY +V L + G
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCG 420
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
+ ++ L M V A +W A++ A +G
Sbjct: 421 DIDDSTRLFNEMNVRD-AVSWTAMVSAYAQFGR 452
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 149/334 (44%), Gaps = 47/334 (14%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
AR+VFD +P+ ++ S+ ++ Y+K G I+ + F+K P RD W+VLI GY+ +GL
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 94 NEALKIFQG-MELMNVKPDEYIMVSLMSACSQVGNLDLAKWV---------DCYLSQSS- 142
A+K + M + +++++ S G++ L K + + YL S
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 143 --------------------IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
+D T + +L+ CG ++ A +LF M K D S+
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSW 238
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TMK 241
+MI+GL+ +G A++A+ F +M +GL D F +L AC + EGK ++
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
Query: 242 SKYSMVPSPEHY---ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
+ + +H + ++D+ + L A + M + + +W A++ YG+
Sbjct: 299 TNFQ-----DHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVG---YGQT 349
Query: 299 ELGEIVANRLFELEPENSSP--YVLLSSIYAAAD 330
E +++ P Y L +I A A+
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 123/315 (39%), Gaps = 79/315 (25%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTV----- 51
AK VF +M ++N+ SW AMV G + G A K+F DM P+ + +
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++ Y K GDI + LF++ RDA W+ +
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSS 142
+S YAQ G E +++F M +KPD + ++SACS+ G ++ ++ S+
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I H + +ID+ ++ G ++ A + MP
Sbjct: 504 IVPSIGH-YSCMIDLFSRSGRLEEAMRFINGMP--------------------------- 535
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP-SPEHYACMVDLLS 261
PD +T +L+AC + +E GK E++ + P P Y + + +
Sbjct: 536 -------FPPDAIGWTTLLSACRNKGNLEIGKWAAESL---IELDPHHPAGYTLLSSIYA 585
Query: 262 RSGQLKEAYELLKSM 276
G+ +L + M
Sbjct: 586 SKGKWDSVAQLRRGM 600
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGY 56
D++ R+F +M R+ SW AMV + G + ++FD M + D V+ T +I
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 57 AKVGDIASARALFDKAPKRDAFL-----WSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ G + + F + +S +I ++++G EA++ GM PD
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF---PPD 539
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDRANK 169
+L+SAC GNL++ KW ++S I++ H L + A G D +
Sbjct: 540 AIGWTTLLSACRNKGNLEIGKWA----AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 170 LFEEMPKRDL 179
L M ++++
Sbjct: 596 LRRGMREKNV 605
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 212/394 (53%), Gaps = 41/394 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTVM---- 52
A+ VF +MP ++L +WN+M+ G V GD + ++ + M P + ++ +M
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 53 -----------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
ID Y K G+ A +F K K A W+V+
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
IS Y G +A++++ M + VKPD S++ ACSQ+ L+ K + +S+S +
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL 441
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ + +++AL+DM +KCGN A ++F +PK+D+ S+ MI HG +A+ F+
Sbjct: 442 ETDEL-LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M GL PD +L+AC H L++EG +F M+SKY + P EHY+CM+D+L R+
Sbjct: 501 EMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRA 560
Query: 264 GQLKEAYELLKSMPVES-HASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
G+L EAYE+++ P S +A L AC + E LG+ +A L E P+++S Y++L
Sbjct: 561 GRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVL 620
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
++YA+ + W V+ KMKE GLRK PGCSWI
Sbjct: 621 FNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 170/365 (46%), Gaps = 44/365 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTV----- 51
+N+ +VF +MPER++ SWN ++ + G+ A ++F M E + VS TV
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D Y K + AR +F K P++ W+
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I GY G ++I M + +P + + S++ ACS+ NL K++ Y+ +S
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ +V +LID+ KCG + A +F + K S+ MI G +AV +
Sbjct: 339 VVN-ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
+++M++ G+ PD FT +L ACS +E+GK ++ S+ + + ++D+ S
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI-SESRLETDELLLSALLDMYS 456
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE--LGEIVANRLFELEPENSSPY 319
+ G KEA+ + S+P + +W ++ A +G+ L + + F L+P+ +
Sbjct: 457 KCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLL 515
Query: 320 VLLSS 324
+LS+
Sbjct: 516 AVLSA 520
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 132/248 (53%), Gaps = 5/248 (2%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DVV + ++ YAK ++ +FD+ P+RD W+ +IS + Q+G +AL++F ME
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+P+ + +SACS++ L+ K + + ++ + +V +AL+DM KC +
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE-YVNSALVDMYGKCDCL 259
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ A ++F++MP++ L ++ SMI+G G ++ V + N+M+ EG P T IL AC
Sbjct: 260 EVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYAC-MVDLLSRSGQLKEAYELLKSMPVESHAS 283
S R + GK F S+V + + C ++DL + G+ A E + S + A
Sbjct: 320 SRSRNLLHGK--FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA-ETVFSKTQKDVAE 376
Query: 284 AWGALLGA 291
+W ++ +
Sbjct: 377 SWNVMISS 384
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 158/305 (51%), Gaps = 19/305 (6%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKR-DAFLWSVLISGYAQNGLPNEALKIFQ 101
RDVV +I+ Y D SAR +F+ R D ++W+ L+SGY++N + ++ L++F+
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 102 GMELMNVK---PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
L+N PD + +++ A +G L + + + +S + V ++L+ M
Sbjct: 96 --RLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGY-VCDVVVASSLVGMY 152
Query: 159 AKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
AK + + ++F+EMP+RD+ S+ ++I G AE+A+ LF +M + G P++ + T
Sbjct: 153 AKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLT 212
Query: 219 VILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHY--ACMVDLLSRSGQLKEAYELLKS 275
V ++ACS +E GK + + +K + + + Y + +VD+ + L+ A E+ +
Sbjct: 213 VAISACSRLLWLERGKEIHRKCVKKGFEL----DEYVNSALVDMYGKCDCLEVAREVFQK 268
Query: 276 MPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP-YVLLSSIYAAADQWLD 334
MP +S AW +++ G+ + + NR+ E + P L+SI A + +
Sbjct: 269 MPRKSLV-AWNSMIKGYVAKGDSKSCVEILNRMI---IEGTRPSQTTLTSILMACSRSRN 324
Query: 335 VSHVK 339
+ H K
Sbjct: 325 LLHGK 329
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 213/394 (54%), Gaps = 41/394 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGD-------------------------LINARK- 36
A+RVF + + + SWNA++GG + D L++A
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 37 -------------VFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ + ERD+ + ++ Y G++ + +ALFD + W+ +
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+GY QNG P+ AL +F+ M L ++ M+ + ACS + +L L + Y + +
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ + +LIDM AK G++ +++K+F + ++ S+ +MI G IHG A++A+ LF
Sbjct: 629 E-DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 687
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M G PD+ F +LTAC+H L+ EG Y + MKS + + P+ +HYAC++D+L R+
Sbjct: 688 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 264 GQLKEAYELL-KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
GQL +A ++ + M E+ W +LL +C+ + +E+GE VA +LFELEPE YVLL
Sbjct: 748 GQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLL 807
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S++YA +W DV V+ +M E LRK GCSWI
Sbjct: 808 SNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 150/340 (44%), Gaps = 52/340 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF-------DDMPERDVV------- 47
NA+ +F +N+ SWN MVGG GD V +D+ +V
Sbjct: 345 NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 404
Query: 48 ----SF-----------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
SF + YAK G ++ A+ +F + W
Sbjct: 405 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 464
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ LI G+AQ+ P +L M++ + PD + + SL+SACS++ +L L K V ++ +
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ ++ V +++ + CG + LF+ M + L S+ ++I G +G+ ++A+G
Sbjct: 525 NWLE-RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 583
Query: 201 LFNKMLNEGLIPDNAAFTVILTACS---HGRLVEEGKHYFETMKSKYSMVPSPEHYAC-M 256
+F +M+ G+ + + ACS RL E Y + ++ AC +
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY-----ALKHLLEDDAFIACSL 638
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
+D+ +++G + ++ ++ + +S AS W A++ +G
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 677
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 8/260 (3%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM- 103
D V T +I YA G +R +FD ++ F W+ +IS Y++N L +E L+ F M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
++ PD + ++ AC+ + ++ + V + ++ + + V AL+ G
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL-VEDVFVGNALVSFYGTHGF 237
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE----GLIPDNAAFTV 219
+ A +LF+ MP+R+L S+ SMI+ S +G++E++ L +M+ E +PD A
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 220 ILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
+L C+ R + GK K + ++D+ S+ G + A + K M
Sbjct: 298 VLPVCAREREIGLGKG-VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNN 355
Query: 280 SHASAWGALLGACKFYGEVE 299
+ +W ++G G+
Sbjct: 356 KNVVSWNTMVGGFSAEGDTH 375
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 46/278 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------ 43
+A ++F MPERNL SWN+M+ G + + +M E
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299
Query: 44 -------------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
+++V ++D Y+K G I +A+ +F ++
Sbjct: 300 PVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVV 359
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMEL--MNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
W+ ++ G++ G + + + M +VK DE +++ + C L K + C
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
Y + + V A + AKCG++ A ++F + + + S+ ++I G +
Sbjct: 420 YSLKQEFVYNEL-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
++ +M GL+PD+ +L+ACS + + GK
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 9/253 (3%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV ++ Y G + A LFD P+R+ W+ +I ++ NG E+ + M
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 105 LMN----VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAK 160
N PD +V+++ C++ + L K V + + +D + + AL+DM +K
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD-KELVLNNALMDMYSK 339
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML--NEGLIPDNAAFT 218
CG + A +F+ +++ S+ +M+ G S G + +ML E + D
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 219 VILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
+ C H + K K V + V ++ G L A + +
Sbjct: 400 NAVPVCFHESFLPSLKE-LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS 458
Query: 279 ESHASAWGALLGA 291
++ ++W AL+G
Sbjct: 459 KT-VNSWNALIGG 470
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 237 bits (605), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 216/425 (50%), Gaps = 72/425 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A++VF +MP R+L SWN MV G + G L ARK+FD+M E+D S+T M+ GY K
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQ 197
Query: 62 IASARALFD-------------------------KAPKR---------------DAFLWS 81
A L+ K +R D LWS
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 82 VLISGYAQNGLPNEALKIF-------------------------QGMELMN------VKP 110
L+ Y + G +EA IF +G L + +P
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERP 317
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+EY +++AC+ + +L K V Y+++ D + ++L+DM KCGN++ A +
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD-PYSFASSSLVDMYTKCGNIESAKHV 376
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
+ PK DL S+ S+I G + +G ++A+ F+ +L G PD+ F +L+AC+H LV
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
E+G +F ++ K+ + + +HY C+VDLL+RSG+ ++ ++ MP++ W ++LG
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLG 496
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKL 350
C YG ++L E A LF++EPEN YV +++IYAAA +W + ++ +M+E G+ K
Sbjct: 497 GCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKR 556
Query: 351 PGCSW 355
PG SW
Sbjct: 557 PGSSW 561
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 155/281 (55%), Gaps = 4/281 (1%)
Query: 18 WNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
WN ++ K G L++ARKVFD+MP RD+ S+ VM++GYA+VG + AR LFD+ ++D+
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
+ W+ +++GY + P EAL ++ M+ + N +P+ + + ++A + V + K +
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
++ ++ +D + + ++L+DM KCG +D A +F+++ ++D+ S+ SMI
Sbjct: 243 HIVRAGLDSDEV-LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
+ LF++++ P+ F +L AC+ E GK M ++ P + +
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM-TRVGFDPYSFASSSL 360
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
VD+ ++ G ++ A ++ P S W +L+G C G+
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVS-WTSLIGGCAQNGQ 400
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 30/237 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMIDGY 56
++AK V P+ +L SW +++GG + G A K FD + + D V+F ++
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 57 AKVGDIASARALFDKAPKRDAF-----LWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
G + F ++ ++ L+ A++G + + M + KP
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM---KPS 487
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+++ S++ CS GN+DLA+ L + + T+V A ++ A G + K+
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA--NIYAAAGKWEEEGKMR 545
Query: 172 EEM-----PKRDLFSYCSMIQGLSIHGYAEQAVGLFN-----------KMLNEGLIP 212
+ M KR S+ + + + A+ + ++N KM EG +P
Sbjct: 546 KRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 209/399 (52%), Gaps = 44/399 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
D A+ VF +M R++ +W M+ G + GD+ NA ++ M
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
D++ T +I YAK + +F A K WS
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+G QN L ++AL +F+ M +V+P+ + SL+ A + + +L A + CYL+++
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLF----EEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ L+ + +KCG ++ A+K+F E+ +D+ + ++I G +HG
Sbjct: 450 GF-MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
A+ +F +M+ G+ P+ FT L ACSH LVEEG F M Y + HY C+V
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV 568
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
DLL R+G+L EAY L+ ++P E ++ WGALL AC + V+LGE+ AN+LFELEPEN+
Sbjct: 569 DLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTG 628
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLL++IYAA +W D+ V++ M+ GLRK PG S I
Sbjct: 629 NYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 161/373 (43%), Gaps = 50/373 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--------PE----------- 43
A+++F +MP+ +L S+N ++ V+ G +A VF M P+
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA 127
Query: 44 ----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
RD ++ Y G + AR +FD RD W+
Sbjct: 128 GELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWN 187
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGY +NG N+AL +F M +V D +VS++ C + +L++ + V + +
Sbjct: 188 TMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK 247
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + V AL++M KCG MD A +F+ M +RD+ ++ MI G + G E A+ L
Sbjct: 248 RLG-DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL 306
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDL 259
M EG+ P+ +++ C V +GK H + + YS + ++ +
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE---TSLISM 363
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE--LGEIVANRLFELEPENSS 317
++ ++ + + S + H W A++ C V LG R ++EP ++
Sbjct: 364 YAKCKRVDLCFRVF-SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 318 PYVLLSSIYAAAD 330
LL + A AD
Sbjct: 423 LNSLLPAYAALAD 435
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 49/229 (21%)
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
SL++ + ++ K + C++ G H+++ L A CG++ A KLFEEMP+
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSG--HILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL--IPDNAAFTVILTACS--------- 225
L SY +I+ G A+ +F +M++EG+ +PD + + A
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 226 --HGRL------------------------VEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
HGR+ VE + F+ MK++ + + M+
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI-----SWNTMISG 192
Query: 260 LSRSGQLKEAYELLKSMPVES----HASAWGALLGACKFYGEVELGEIV 304
R+G + +A + M ES HA+ ++L C ++E+G V
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIV-SMLPVCGHLKDLEMGRNV 240
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 198/353 (56%), Gaps = 1/353 (0%)
Query: 4 KRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIA 63
K++ + +L+ NA++G K G L AR +FD+M E+D V++ +I GY G +
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 64 SARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
A ALF + W+ +ISG QN E + F+ M +P+ + SL+ + +
Sbjct: 318 EAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLT 377
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYC 183
NL K + + ++ D +V ++ID AK G + A ++F+ R L ++
Sbjct: 378 YSSNLKGGKEIHAFAIRNGAD-NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWT 436
Query: 184 SMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
++I ++HG ++ A LF++M G PD+ T +L+A +H + +H F++M +K
Sbjct: 437 AIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 496
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI 303
Y + P EHYACMV +LSR+G+L +A E + MP++ A WGALL G++E+
Sbjct: 497 YDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARF 556
Query: 304 VANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+RLFE+EPEN+ Y +++++Y A +W + V+NKMK GL+K+PG SWI
Sbjct: 557 ACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 121/236 (51%), Gaps = 17/236 (7%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
+ DV MI Y K +I SAR +FD+ +RD W+ +ISGY+Q+G + K+++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 103 M-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
M + KP+ ++S+ AC Q +L V + ++ I + + + A+I AKC
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS-LCNAVIGFYAKC 282
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G++D A LF+EM ++D +Y ++I G HG ++A+ LF++M + GL NA + ++
Sbjct: 283 GSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLM 342
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMV-----PSPEHYACMVDLLSRSGQLKEAYEL 272
+ H+ E + S M+ P+ + ++ L+ S LK E+
Sbjct: 343 ----------QNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI 388
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 15/273 (5%)
Query: 37 VFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEA 96
VF P+ + S +I Y + A +FD+ R+AF ++ L+ Y + +A
Sbjct: 50 VFSIKPDNFLAS--KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDA 107
Query: 97 LKIFQ---GMELMN---VKPDEYIMVSLMSACSQVGNL---DLAKWVDCYLSQSSIDIGQ 147
+F G + +PD + ++ A S + LA+ V ++ + D
Sbjct: 108 FSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFD-SD 166
Query: 148 THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
V +I KC N++ A K+F+EM +RD+ S+ SMI G S G E ++ ML
Sbjct: 167 VFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLA 226
Query: 208 -EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
P+ + AC + G + M + + A ++ ++ G L
Sbjct: 227 CSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNA-VIGFYAKCGSL 285
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
A L M E + +GA++ +G V+
Sbjct: 286 DYARALFDEMS-EKDSVTYGAIISGYMAHGLVK 317
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 209/390 (53%), Gaps = 39/390 (10%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-------------------- 44
R F++M +++L SW ++ G + + A ++F D+ ++
Sbjct: 405 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 464
Query: 45 ------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
D V ++D Y K ++ A +F+ +D W+ +IS
Sbjct: 465 SMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 524
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
A NG +EA+++F+ M + D ++ ++SA + + L+ + + CYL + +
Sbjct: 525 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCL- 583
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+ + A++DM A CG++ A +F+ + ++ L Y SMI +HG + AV LF+KM
Sbjct: 584 EGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR 643
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
+E + PD+ +F +L ACSH L++EG+ + + M+ +Y + P PEHY C+VD+L R+ +
Sbjct: 644 HENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 703
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIY 326
EA+E +K M E A W ALL AC+ + E E+GEI A RL ELEP+N VL+S+++
Sbjct: 704 VEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVF 763
Query: 327 AAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A +W DV V+ KMK G+ K PGCSWI
Sbjct: 764 AEQGRWNDVEKVRAKMKASGMEKHPGCSWI 793
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 42/266 (15%)
Query: 4 KRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--------------------PE 43
++VF +MP+R +WN M+G V G+ +A ++ +M
Sbjct: 99 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158
Query: 44 RDVVS-----------------FTV--MIDGYAKVGDIASARALFDK-APKRDAFLWSVL 83
RD+ S F V ++ YAK D+++AR LFD K DA LW+ +
Sbjct: 159 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 218
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
+S Y+ +G E L++F+ M + P+ Y +VS ++AC L K + + +SS
Sbjct: 219 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 278
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ +V ALI M +CG M +A ++ +M D+ ++ S+I+G + ++A+ F+
Sbjct: 279 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 338
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRL 229
M+ G D + T I+ A GRL
Sbjct: 339 DMIAAGHKSDEVSMTSIIAA--SGRL 362
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 168/388 (43%), Gaps = 79/388 (20%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFT------- 50
A+R+ QM ++ +WN+++ G V+ A + F DM + D VS T
Sbjct: 301 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 360
Query: 51 ----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ID Y+K F + +D W+
Sbjct: 361 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTT 420
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+GYAQN EAL++F+ + ++ DE I+ S++ A S + ++ + K + C++ +
Sbjct: 421 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 480
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ T + L+D+ KC NM A ++FE + +D+ S+ SMI +++G +AV LF
Sbjct: 481 LL--DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELF 538
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSM-----VPSPEHYACM 256
+M+ GL D+ A IL+A + + +G+ + ++ + + V + YAC
Sbjct: 539 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACC 598
Query: 257 VDLLS---------RSGQL---------------KEAYELLKSMPVES----HASAWGAL 288
DL S R G L K A EL M E+ H S + AL
Sbjct: 599 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS-FLAL 657
Query: 289 LGACKFYGEVELGE---IVANRLFELEP 313
L AC G ++ G + +ELEP
Sbjct: 658 LYACSHAGLLDEGRGFLKIMEHEYELEP 685
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 64 SARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
S +FD+ P R AF W+ +I Y NG P AL ++ M + V +L+ AC+
Sbjct: 97 SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR-DLFSY 182
++ ++ + L + +V AL+ M AK ++ A +LF+ ++ D +
Sbjct: 157 KLRDIRSGSELHSLLVKLGYH-STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 215
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
S++ S G + + + LF +M G P++ LTAC + GK ++
Sbjct: 216 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 275
Query: 243 KYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
S S E Y C ++ + +R G++ +A +L+ M + W +L+
Sbjct: 276 --SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 9/203 (4%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G I+A + ++ +I Y + G + A + + D W+ LI G
Sbjct: 264 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 323
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL----DLAKWVDCYLSQSS 142
Y QN + EAL+ F M K DE M S+++A ++ NL +L +V + S+
Sbjct: 324 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 383
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ +G T LIDM +KC + F M +DL S+ ++I G + + +A+ LF
Sbjct: 384 LQVGNT-----LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 438
Query: 203 NKMLNEGLIPDNAAFTVILTACS 225
+ + + D IL A S
Sbjct: 439 RDVAKKRMEIDEMILGSILRASS 461
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 211/394 (53%), Gaps = 44/394 (11%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGG-------------------DLINARKVFDDMPE--- 43
VF+ M ER++ SWN M+ V+ G D I +
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 44 ------------RDVVSF----TVMIDGYAKVGDIASARALFDKA--PKRDAFLWSVLIS 85
R + F + +ID Y+K G I ++ LF+ + +RD W+ +IS
Sbjct: 435 KEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GY QNG + +F+ M N++P+ + S++ ACSQ+G++DL K + + + +D
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD- 553
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
V +AL+DM +K G + A +F + +R+ +Y +MI G HG E+A+ LF M
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
G+ PD F +L+ACS+ L++EG FE M+ Y++ PS EHY C+ D+L R G+
Sbjct: 614 QESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGR 673
Query: 266 LKEAYELLKSMPVESH-ASAWGALLGACKFYGEVELGEIVANRLFELEP-ENSSPY-VLL 322
+ EAYE +K + E + A WG+LLG+CK +GE+EL E V+ RL + + +N S Y VLL
Sbjct: 674 VNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLL 733
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S++YA +W V V+ M+E+GL+K G S I
Sbjct: 734 SNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 156/363 (42%), Gaps = 55/363 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINA-------------------------- 34
++++RVF ERN+ WN M+G V+ L+ +
Sbjct: 268 ESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASA 327
Query: 35 -----------------RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
K F ++P V S VM Y++ G + + +F +RD
Sbjct: 328 VSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVM---YSRCGSVHKSFGVFLSMRERDV 384
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ +IS + QNGL +E L + M+ K D + +L+SA S + N ++ K +
Sbjct: 385 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF 444
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE--EMPKRDLFSYCSMIQGLSIHGYA 195
L + I + + LIDM +K G + + KLFE +RD ++ SMI G + +G+
Sbjct: 445 LIRQGIQFEGMN--SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC 255
E+ +F KML + + P+ IL ACS V+ GK +Y + + +
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASA 561
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN 315
+VD+ S++G +K A ++ + + +LG YG+ +GE + ++
Sbjct: 562 LVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG----YGQHGMGERAISLFLSMQESG 617
Query: 316 SSP 318
P
Sbjct: 618 IKP 620
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 168/375 (44%), Gaps = 50/375 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSF------- 49
D ++VF M +N+ +WN ++ VK G A + F M +V VSF
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 50 ------------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFL 79
+ I YA++GDI S+R +FD +R+ +
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 80 WSVLISGYAQNGLPNEALKIF-QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I Y QN E++++F + + + DE + SA S + ++L + ++
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
S++ ++ +V +L+ M ++CG++ ++ +F M +RD+ S+ +MI +G ++
Sbjct: 345 SKNFRELPIV-IVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ L +M +G D T +L+A S+ R E GK + + Y ++D
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LID 461
Query: 259 LLSRSGQLKEAYELLK-SMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
+ S+SG ++ + +L + S E + W +++ G E +V ++ E +N
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE---QNIR 518
Query: 318 P-YVLLSSIYAAADQ 331
P V ++SI A Q
Sbjct: 519 PNAVTVASILPACSQ 533
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 11/240 (4%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN--VKPDEYIMVS 117
G+ AR LFD PK LW+ +I G+ N LP+EAL + M+ D Y S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN------MDRANKLF 171
+ AC++ NL K V C+L + + + V +L++M C N D K+F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ M ++++ ++ ++I G +A F M+ + P +F + A S R ++
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 232 EGKHYFETM-KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
+ ++ M K V + + + + G ++ + + S VE + W ++G
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VERNIEVWNTMIG 290
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 208/369 (56%), Gaps = 19/369 (5%)
Query: 1 DNAKRVFVQMPERN-------LTSWNAMVGGL--VKGGDLINARKVFD----DMPERDVV 47
D A F QM +R LT+ + GL +K G I+A+ D+P ++
Sbjct: 573 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA- 631
Query: 48 SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
++ Y++ G I + F++ D W+ L+SG+ Q+G EAL++F M
Sbjct: 632 ----LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
+ + + S + A S+ N+ K V ++++ D +T V ALI M AKCG++ A
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD-SETEVCNALISMYAKCGSISDA 746
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
K F E+ ++ S+ ++I S HG+ +A+ F++M++ + P++ +L+ACSH
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
LV++G YFE+M S+Y + P PEHY C+VD+L+R+G L A E ++ MP++ A W
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 288 LLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
LL AC + +E+GE A+ L ELEPE+S+ YVLLS++YA + +W + KMKE+G+
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926
Query: 348 RKLPGCSWI 356
+K PG SWI
Sbjct: 927 KKEPGQSWI 935
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 162/356 (45%), Gaps = 55/356 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLV----------------------------------KG 28
A +VF +MPER + +WN M+ L +G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 29 GDL-------INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
G + I+AR ++ + + VV +ID Y++ G + AR +FD +D W
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISG ++N EA+++F M ++ + P Y S++SAC ++ +L++ + + + +
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
T+V AL+ + GN+ A +F M +RD +Y ++I GLS GY E+A+ L
Sbjct: 318 GFS-SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M +GL PD+ ++ ACS + G+ +K + + +++L +
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYA 435
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGA----------CKFYGEVELGEIVANR 307
+ ++ A + VE+ W +L A + + ++++ EIV N+
Sbjct: 436 KCADIETALDYFLETEVEN-VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 173/370 (46%), Gaps = 47/370 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTVM--- 52
+A+ +F M +R+ ++N ++ GL + G A ++F M P+ + ++ V+
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 53 -------------------------IDG-----YAKVGDIASARALFDKAPKRDAFLWSV 82
I+G YAK DI +A F + + LW+V
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++ Y + +IF+ M++ + P++Y S++ C ++G+L+L + + + +++
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ +V + LIDM AK G +D A + +D+ S+ +MI G + + + ++A+ F
Sbjct: 521 FQL-NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLL 260
+ML+ G+ D T ++AC+ + ++EG+ H + S +P +V L
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLY 636
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
SR G+++E+Y + + AW AL+ + G E V R+ E +++ +
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNI-AWNALVSGFQQSGNNEEALRVFVRM-NREGIDNNNFT 694
Query: 321 LLSSIYAAAD 330
S++ AA++
Sbjct: 695 FGSAVKAASE 704
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 140/303 (46%), Gaps = 11/303 (3%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMI 53
N+ R+F QM N ++ +++ ++ GDL ++ + + + +V+I
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 54 DGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
D YAK+G + +A + + +D W+ +I+GY Q ++AL F+ M ++ DE
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
+ + +SAC+ + L + + S AL+ + ++CG ++ + FE+
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVSGFS-SDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
D ++ +++ G G E+A+ +F +M EG+ +N F + A S +++G
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 234 KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
K + +K E ++ + ++ G + +A + + ++ S W A++ A
Sbjct: 712 KQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYS 769
Query: 294 FYG 296
+G
Sbjct: 770 KHG 772
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 141/335 (42%), Gaps = 50/335 (14%)
Query: 11 PERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVM----IDGYAKVGDIASAR 66
P W + G L G L RK+ + + + S + D Y GD+ A
Sbjct: 82 PNHQTLKW-LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 67 ALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG 126
+FD+ P+R F W+ +I A L E +F M NV P+E ++ AC
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 127 -NLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSM 185
D+ + + + + T V LID+ ++ G +D A ++F+ + +D S+ +M
Sbjct: 201 VAFDVVEQIHARILYQGLR-DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG- 233
I GLS + +A+ LF M G++P AF+ +L+AC HG +++ G
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 234 -----------------------KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
+H F M + ++ Y +++ LS+ G ++A
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YNTLINGLSQCGYGEKAM 374
Query: 271 ELLKSMP---VESHASAWGALLGACKFYGEVELGE 302
EL K M +E ++ +L+ AC G + G+
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 98 KIFQGMELMNVKPDEYIMVSLMSACSQV-GNLDLAKWVDCYLSQSSIDIGQTHVVAALID 156
K +E ++P+ + L+ C + G+LD + + + + +D + L D
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLD-SNGCLSEKLFD 128
Query: 157 MNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAA 216
G++ A K+F+EMP+R +F++ MI+ L+ + GLF +M++E + P+
Sbjct: 129 FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGT 188
Query: 217 FTVILTACSHGRL---VEEGKH---YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
F+ +L AC G + V E H ++ ++ ++V +P ++DL SR+G + A
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDS-TVVCNP-----LIDLYSRNGFVDLAR 242
Query: 271 ELLKSMPVESHAS----------------------------------AWGALLGACKFYG 296
+ + ++ H+S A+ ++L ACK
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 297 EVELGEIVANRLFELEPENSSPYVL--LSSIYAAADQWLDVSHVKNKMKER 345
+E+GE + + +L +S YV L S+Y + H+ + M +R
Sbjct: 303 SLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 234 bits (596), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 219/407 (53%), Gaps = 53/407 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVK-----------------GGDLINARKVFDDMP-- 42
+ +RVF M +R + WNAM+ G + G L N+ + +P
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+RD ++D Y+++G I A +F K RD W+
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 82 VLISGYAQNGLPNEAL-----------KIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
+I+GY + +AL K+ +G +++KP+ +++++ +C+ + L
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
K + Y ++++ V +AL+DM AKCG + + K+F+++P++++ ++ +I
Sbjct: 536 GKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSP 250
+HG ++A+ L M+ +G+ P+ F + ACSH +V+EG F MK Y + PS
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVE-SHASAWGALLGACKFYGEVELGEIVANRLF 309
+HYAC+VDLL R+G++KEAY+L+ MP + + A AW +LLGA + + +E+GEI A L
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 310 ELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+LEP +S YVLL++IY++A W + V+ MKE+G+RK PGCSWI
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 15/259 (5%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNV 108
+ ++D Y + S R +FD R LW+ +I+GY+QN EAL +F GM E +
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
+ M ++ AC + G + + ++ + +D + V L+DM ++ G +D A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR-FVQNTLMDMYSRLGKIDIAM 460
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN-----------EGLIPDNAAF 217
++F +M RDL ++ +MI G + E A+ L +KM N L P++
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 218 TVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
IL +C+ + +GK K ++ + +VD+ ++ G L+ + ++ +P
Sbjct: 521 MTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 278 VESHASAWGALLGACKFYG 296
+ + W ++ A +G
Sbjct: 580 -QKNVITWNVIIMAYGMHG 597
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 44/263 (16%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV--VSFTV----------- 51
+VF ++ ERN SWN+++ L A + F M + +V SFT+
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++ Y K+G +AS++ L RD W+ +
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY-LSQSS 142
+S QN EAL+ + M L V+PDE+ + S++ ACS + L K + Y L S
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D + V +AL+DM C + ++F+ M R + + +MI G S + + ++A+ LF
Sbjct: 334 LD-ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 203 NKM-LNEGLIPDNAAFTVILTAC 224
M + GL+ ++ ++ AC
Sbjct: 393 IGMEESAGLLANSTTMAGVVPAC 415
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 7/193 (3%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
V +++ Y K GD + +FD+ +R+ W+ LIS AL+ F+ M
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 106 MNVKPDEYIMVSLMSACSQVG---NLDLAKWVDCY-LSQSSIDIGQTHVVAALIDMNAKC 161
NV+P + +VS+++ACS + L + K V Y L + ++ + ++ L+ M K
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN---SFIINTLVAMYGKL 249
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G + + L RDL ++ +++ L + +A+ +M+ EG+ PD + +L
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 222 TACSHGRLVEEGK 234
ACSH ++ GK
Sbjct: 310 PACSHLEMLRTGK 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%)
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W L+ ++ L EA+ + M ++ +KPD Y +L+ A + + +++L K + ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+ + V L+++ KCG+ K+F+ + +R+ S+ S+I L E A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSH 226
F ML+E + P + ++TACS+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSN 211
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 205/359 (57%), Gaps = 5/359 (1%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYA 57
+A +VF + P+R ++ WN ++ G + D+ A +F MPER+ S++ +I GY
Sbjct: 179 HAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYV 238
Query: 58 KVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS 117
G++ A+ LF+ P+++ W+ LI+G++Q G A+ + M +KP+EY + +
Sbjct: 239 DSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAA 298
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
++SACS+ G L + Y+ + I + + + AL+DM AKCG +D A +F M +
Sbjct: 299 VLSACSKSGALGSGIRIHGYILDNGIKLDRA-IGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF 237
D+ S+ +MIQG ++HG QA+ F +M+ G PD F +LTAC + V+ G ++F
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFF 417
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
++M+ Y++ P+ +HY +VDLL R+G+L EA+EL+++MP+ + W AL ACK +
Sbjct: 418 DSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKG 477
Query: 298 VELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
E V+ L EL+PE Y+ L +A+ DV + +++R + G S+I
Sbjct: 478 YRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYI 536
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 114/276 (41%), Gaps = 49/276 (17%)
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PDE +SL+ AC +L + V + + + + V A L+ ++ + D +
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGV--LSSRVAAQLVSCSSLLKSPDYSLS 81
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F +R+ F ++I+GL+ + E +V F ML G+ PD F +L + S
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYE------------------ 271
G+ + S + +VD+ +++GQLK A++
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLS-LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 272 -----------------LLKSMPVESHASAWGALLGACKFYGEVELGEI-VANRLFELEP 313
L +SMP E ++ +W L+ G V+ GE+ A +LFEL P
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMP-ERNSGSWSTLIK-----GYVDSGELNRAKQLFELMP 254
Query: 314 E-NSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
E N + L + ++ + +M E+GL+
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 204/341 (59%), Gaps = 13/341 (3%)
Query: 26 VKGGDLINAR----KVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+K GDL+ K+F D D + T ++D Y+ + A +FD+ PKRD W+
Sbjct: 124 IKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWN 183
Query: 82 VLISGYAQNGLPNEALKIFQGMELMN-----VKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
VL S Y +N + L +F M+ N VKPD + + AC+ +G LD K V
Sbjct: 184 VLFSCYLRNKRTRDVLVLFDKMK--NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
++ ++ + G ++ L+ M ++CG+MD+A ++F M +R++ S+ ++I GL+++G+ +
Sbjct: 242 FIDENGLS-GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGK 300
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS-KYSMVPSPEHYAC 255
+A+ FN+ML G+ P+ T +L+ACSH LV EG +F+ M+S ++ + P+ HY C
Sbjct: 301 EAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC 360
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN 315
+VDLL R+ L +AY L+KSM ++ ++ W LLGAC+ +G+VELGE V + L EL+ E
Sbjct: 361 VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEE 420
Query: 316 SSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ YVLL + Y+ +W V+ +++ MKE+ + PGCS I
Sbjct: 421 AGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTVMID 54
D A +VF M ERN+ SW A++ GL G A + F++M PE + T ++
Sbjct: 269 DKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ--TLTGLLS 326
Query: 55 GYAKVGDIASARALFDKAP------KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+ G +A FD+ K + + ++ + L ++A + + ME+
Sbjct: 327 ACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEM--- 383
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
KPD I +L+ AC G+++L + V +L + + +V+ L++ + G ++
Sbjct: 384 KPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVL--LLNTYSTVGKWEKVT 441
Query: 169 KLFEEMPKRDLFSY--CSMIQ 187
+L M ++ + + CS I+
Sbjct: 442 ELRSLMKEKRIHTKPGCSAIE 462
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/309 (41%), Positives = 189/309 (61%), Gaps = 3/309 (0%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ Y K G+++SA LF+ +D W+ ++ Q G AL+ F M V+
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
D + +VS++SAC Q+G+L++ + + + ID V A +DM+ KCGN + A
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII-VENARLDMHLKCGNTEAARV 266
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
LFEEM +R++ S+ +MI G +++G + +A+ LF M NEGL P+ F +L+ACSH L
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 230 VEEGKHYFETM--KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
V EGK YF M + ++ P EHYACMVDLL RSG L+EAYE +K MPVE WGA
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 288 LLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
LLGAC + ++ LG+ VA+ L E P+ S +VLLS+IYAAA +W V V++KM++ G
Sbjct: 387 LLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGT 446
Query: 348 RKLPGCSWI 356
+K+ S +
Sbjct: 447 KKVAAYSSV 455
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 49 FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
T +++ +GD+ AR +FD+ K FLW+ L GY +N LP E+L +++ M + V
Sbjct: 46 LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGV 105
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA-LIDMNAKCGNMDRA 167
+PDE+ ++ A SQ+G+ + ++ + G +VA L+ M K G + A
Sbjct: 106 RPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG--FGCLGIVATELVMMYMKFGELSSA 163
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
LFE M +DL ++ + + G + A+ FNKM + + D+ +L+AC
Sbjct: 164 EFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQL 223
Query: 228 RLVEEGKHYFETMKSK 243
+E G+ ++ + +
Sbjct: 224 GSLEIGEEIYDRARKE 239
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 43/216 (19%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTVM------- 52
+A+ +F M ++L +WNA + V+ G+ A + F+ M V SFTV+
Sbjct: 162 SAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACG 221
Query: 53 ------------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+D + K G+ +AR LF++ +R+ WS
Sbjct: 222 QLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWST 281
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS- 141
+I GYA NG EAL +F M+ ++P+ + ++SACS G ++ K + QS
Sbjct: 282 MIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Query: 142 --SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+++ + H A ++D+ + G ++ A + ++MP
Sbjct: 342 DKNLEPRKEH-YACMVDLLGRSGLLEEAYEFIKKMP 376
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 20/189 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGY 56
+ A+ +F +M +RN+ SW+ M+ G GD A +F M + V+F ++
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 57 AKVGDIASARALF-------DK--APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
+ G + + F DK P+++ ++ ++ ++GL EA ++ ++ M
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEH--YACMVDLLGRSGLLEEA---YEFIKKMP 376
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
V+PD I +L+ AC+ ++ L + V L +++ DIG HV+ L ++ A G D
Sbjct: 377 VEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVL--LSNIYAAAGKWDCV 434
Query: 168 NKLFEEMPK 176
+K+ +M K
Sbjct: 435 DKVRSKMRK 443
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 178/306 (58%), Gaps = 2/306 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++D YAK A +F P+R W+ LISGY Q GL LK+F M N++ D
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ +++ A + +L L K + ++ +S ++ + L+DM AKCG++ A ++F
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
EEMP R+ S+ ++I + +G E A+G F KM+ GL PD+ + +LTACSH VE
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+G YF+ M Y + P +HYACM+DLL R+G+ EA +L+ MP E W ++L A
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 292 CKFYGEVELGEIVANRLFELEP-ENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKL 350
C+ + L E A +LF +E +++ YV +S+IYAAA +W V VK M+ERG++K+
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690
Query: 351 PGCSWI 356
P SW+
Sbjct: 691 PAYSWV 696
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 3/208 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N +V L++ G + ARKV+D+MP ++ VS MI G+ K GD++SAR LFD P R
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVV 111
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMN--VKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
W++L+ YA+N +EA K+F+ M + PD +L+ C+ + V
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 137 YLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
+ + D V+ L+ + +D A LFEE+P++D ++ ++I G G
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+++ LF KM G P + F+ +L A
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 137/285 (48%), Gaps = 9/285 (3%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
RD ++D Y+K + R LFD+ P+ D ++V+IS Y+Q +L F+ M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
+ M + +++S + + +L + + + C ++ D HV +L+DM AKC
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD-SILHVGNSLVDMYAKCEM 401
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ A +F+ +P+R S+ ++I G G + LF KM L D + F +L A
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 224 CSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
+ + GK H F V S + +VD+ ++ G +K+A ++ + MP + +
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSG---SGLVDMYAKCGSIKDAVQVFEEMP-DRN 517
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFE--LEPENSSPYVLLSS 324
A +W AL+ A G+ E ++ E L+P++ S +L++
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTA 562
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 42/258 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
+ A+ +F +P+R SW A++ G V+ G K+F M
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS 462
Query: 44 ----------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+V S + ++D YAK G I A +F++ P R+A W+
Sbjct: 463 ASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWN 522
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL-AKWVDCYLSQ 140
LIS +A NG A+ F M ++PD ++ +++ACS G ++ ++
Sbjct: 523 ALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPI 582
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAV 199
I + H A ++D+ + G A KL +EMP + D + S++ IH A
Sbjct: 583 YGITPKKKH-YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 641
Query: 200 GLFNKMLNEGLIPDNAAF 217
K+ + + D AA+
Sbjct: 642 RAAEKLFSMEKLRDAAAY 659
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYA 57
+A +VF +MP+RN SWNA++ GD A F M E D VS ++ +
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 58 KVGDIASARALFDK-------APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
G + F PK+ ++ ++ +NG EA K+ M+ M +P
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKH--YACMLDLLGRNGRFAEAEKL---MDEMPFEP 619
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN---AKCGNMDRA 167
DE + S+++AC N LA+ ++ + + AA + M+ A G ++
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERA----AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKV 675
Query: 168 NKLFEEMPKRDL-----FSYCSMIQGLSI-------HGYAEQAVGLFNKML----NEGLI 211
+ + M +R + +S+ + + + H ++ V N++ EG
Sbjct: 676 RDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYK 735
Query: 212 PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
PD ++ ++ +E K++ E + ++++ +PE
Sbjct: 736 PDTSS---VVQDVDEQMKIESLKYHSERLAVAFALISTPE 772
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 219/404 (54%), Gaps = 49/404 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--PERD------------- 45
++A++VF ++P+RN+ SW +M+ G G+ ++A +F D+ E D
Sbjct: 128 EDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLV 187
Query: 46 -----------------VVSFTV-------------MIDGYAKVGD--IASARALFDKAP 73
+ SF + ++D YAK G+ +A AR +FD+
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS-LMSACSQVGNLDLAK 132
+D ++ ++S YAQ+G+ NEA ++F+ + V I +S ++ A S G L + K
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
+ + + ++ V ++IDM KCG ++ A K F+ M +++ S+ +MI G +H
Sbjct: 308 CIHDQVIRMGLE-DDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G+A +A+ LF M++ G+ P+ F +L ACSH L EG +F MK ++ + P EH
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
Y CMVDLL R+G L++AY+L++ M ++ + W +LL AC+ + VEL EI RLFEL+
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 313 PENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
N Y+LLS IYA A +W DV V+ MK RGL K PG S +
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLL 530
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 128/264 (48%), Gaps = 12/264 (4%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
+ D+ + +I Y+ G + AR +FD+ PKR+ W+ +I GY NG +A+ +F+
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 103 MELMNVKPDEYI------MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALID 156
+ + D+ + +VS++SACS+V L + + ++ + D G + V L+D
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS-VGNTLLD 226
Query: 157 MNAKCGN--MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
AK G + A K+F+++ +D SY S++ + G + +A +F +++ ++ N
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFN 286
Query: 215 A-AFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
A + +L A SH + GK + + + + ++D+ + G+++ A +
Sbjct: 287 AITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 274 KSMPVESHASAWGALLGACKFYGE 297
M + +W A++ +G
Sbjct: 346 DRMK-NKNVRSWTAMIAGYGMHGH 368
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 67 ALFDK-APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
LF++ K D F W+ +I+ A++G EAL F M +++ P + ACS +
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 126 GNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
++ K Q + G V +ALI M + CG ++ A K+F+E+PKR++ S+
Sbjct: 90 FDIFSGKQT----HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 183 CSMIQGLSIHGYAEQAVGLFNKML------NEGLIPDNAAFTVILTACSH--GRLVEEGK 234
SMI+G ++G A AV LF +L ++ + D+ +++ACS + + E
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 235 HYF 237
H F
Sbjct: 206 HSF 208
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 230 bits (587), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 188/295 (63%), Gaps = 5/295 (1%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
AR +FD+ P+ D W VL++GY + GL +E L++F+ M + ++PDE+ + + ++AC+Q
Sbjct: 68 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 127
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
VG L KW+ ++ + S V AL+DM AKCG ++ A ++F+++ +R++FS+ +
Sbjct: 128 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 187
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
+I G + +GYA++A+ ++ E G+ PD+ +L AC+HG +EEG+ E M+++
Sbjct: 188 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 247
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI 303
Y + P EHY+C+VDL+ R+G+L +A L++ MP++ AS WGALL C+ + VELGE+
Sbjct: 248 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 307
Query: 304 VANRLFELEP----ENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
L +LE E + V LS+IY + + + S V+ +++RG+RK PG S
Sbjct: 308 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 362
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 44/238 (18%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-------------------- 41
+A++VF ++P+ ++ W+ ++ G V+ G +VF +M
Sbjct: 67 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 126
Query: 42 --------------------PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
E DV T ++D YAK G I +A +F K +R+ F W+
Sbjct: 127 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 186
Query: 82 VLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAK-WVDCYLS 139
LI GYA G +A+ + +E + +KPD +++ +++AC+ G L+ + ++ +
Sbjct: 187 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 246
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS-YCSMIQGLSIHGYAE 196
+ I H + ++D+ + G +D A L E+MP + L S + +++ G H E
Sbjct: 247 RYEITPKHEH-YSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVE 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
++ P L+ AC + + K + C++ ++ + + +HV ++ + + +
Sbjct: 8 DIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLD 67
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
A K+F+E+P+ D+ + ++ G G + + +F +ML +GL PD + T LTAC+
Sbjct: 68 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 127
Query: 227 GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
+ +GK E +K K + +VD+ ++ G ++ A E+ K + + +W
Sbjct: 128 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWA 186
Query: 287 ALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAA 329
AL+G YG + RL + VLL + A A
Sbjct: 187 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACA 229
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 230 bits (587), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 202/346 (58%), Gaps = 10/346 (2%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD---IASARALFDK 71
LTS + ++GG G LI A + V + +ID Y+K G + + +F +
Sbjct: 250 LTSLDHLIGGRQFHGKLIKA-----GFHQNSHVG-SGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 72 APKRDAFLWSVLISGYAQNG-LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
D +W+ +ISGY+ N L EA+K F+ M+ + +PD+ V + SACS + +
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 363
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
K + +S I + V ALI + K GN+ A +F+ MP+ + S+ MI+G +
Sbjct: 364 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 423
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSP 250
HG+ +A+ L+ +ML+ G+ P+ F +L+AC+H V+EG+ YF TMK + + P
Sbjct: 424 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA 483
Query: 251 EHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
EHY+CM+DLL R+G+L+EA + +MP + + AW ALLGAC+ + + L E AN L
Sbjct: 484 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMV 543
Query: 311 LEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
++P ++PYV+L+++YA A +W +++ V+ M+ + +RK PGCSWI
Sbjct: 544 MQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 170/422 (40%), Gaps = 111/422 (26%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+ F E N+ S+N +V K + AR++FD++P+ D VS+ +I GYA +
Sbjct: 62 ARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARET 121
Query: 63 ASARALFDKAPKR----DAFLWSVLISG-------------------------------- 86
+A LF + K D F S LI+
Sbjct: 122 FAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 87 -YAQNGLPNEALKIFQGME--------------------------------LMNVKPDEY 113
Y++ GL EA+ +F GM+ K D +
Sbjct: 182 YYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMF 241
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD---RANKL 170
+ S+++A + + +L + L ++ +HV + LID +KCG D + K+
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFH-QNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 171 FEEMPKRDLFSYCSMIQGLSIH-GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS---- 225
F+E+ DL + +MI G S++ +E+AV F +M G PD+ +F + +ACS
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 226 -------HGRLVEEG-------------KHYFET---MKSKYSMVPSPE----HYACMVD 258
HG ++ Y+++ +++ PE + CM+
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 259 LLSRSGQLKEAYELLKSM---PVESHASAWGALLGACKFYGEVELGEIVANRL---FELE 312
++ G EA L + M + + + A+L AC G+V+ G+ N + F++E
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 313 PE 314
PE
Sbjct: 481 PE 482
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N V K G L AR F E +V S+ V++ YAK I AR LFD+ P+ D
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
++ LISGYA A+ +F+ M + + D + + L++AC +DL K + C+
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFS 164
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQ 197
D + V A + +K G + A +F M + RD S+ SMI H +
Sbjct: 165 VSGGFD-SYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAK 223
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKH 235
A+ L+ +M+ +G D +L A + HG+L++ G H
Sbjct: 224 ALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFH 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
Query: 9 QMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARAL 68
+P ++ NA++ K G+L +AR VFD MPE + VSF MI G
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG------------- 421
Query: 69 FDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
YAQ+G EAL ++Q M + P++ V+++SAC+ G +
Sbjct: 422 ------------------YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKV 463
Query: 129 DLAK-WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
D + + + I+ H + +ID+ + G ++ A + + MP +
Sbjct: 464 DEGQEYFNTMKETFKIEPEAEH-YSCMIDLLGRAGKLEEAERFIDAMPYK 512
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 198/349 (56%), Gaps = 6/349 (1%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPE-RDVVSFTVMIDGYAKVGDIASARALFDKA 72
+L S N ++ +K GDL A +F+ + D VS+T MIDGY + GD++ A LF K
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
+D W+V+ISG QN L EA + M +KP L+S+ NLD K
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 133 WVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+ C +++++ ++ +L+ M AKCG ++ A ++F +M ++D S+ SMI GLS
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSH 546
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
HG A++A+ LF +ML+ G P++ F +L+ACSH L+ G F+ MK YS+ P +
Sbjct: 547 HGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGID 606
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE----LGEIVANR 307
HY M+DLL R+G+LKEA E + ++P + +GALLG C + + E A R
Sbjct: 607 HYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMR 666
Query: 308 LFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L EL+P N+ +V L ++YA + ++ +M +G++K PGCSW+
Sbjct: 667 LLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 69/364 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
+ AK+VF MP R++ SWNAM+ G ++ + A+ +F DM E++VV++T M+ GY + G
Sbjct: 186 EKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYG 245
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSL 118
D+ A LF + P+R+ W+ +ISG+A N L EAL +F M ++ V P+ ++SL
Sbjct: 246 DVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 305
Query: 119 MSACSQVG--------------------NLD----LAK-WVDCYLSQSSIDIGQT----- 148
AC +G +D LAK V Y S I Q+
Sbjct: 306 AYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES 365
Query: 149 ---HVVAALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+I+ K G+++RA LFE + D S+ SMI G G +A GLF K
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 205 -------------------------------MLNEGLIPDNAAFTVILTACSHGRLVEEG 233
M+ GL P N+ ++V+L++ +++G
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 234 KH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
KH + K+ P +V + ++ G +++AYE+ M V+ +W +++
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGL 544
Query: 293 KFYG 296
+G
Sbjct: 545 SHHG 548
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 140/288 (48%), Gaps = 29/288 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D A+ +F MPERN+ + NAM+ G VK + A +F +MP ++VVS+TVM+ G
Sbjct: 94 DEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDG 152
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
A LFD+ P+R+ W+ L++G +NG +A ++F M +V +++
Sbjct: 153 RSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS----WNAMIK 208
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
+ ++ AK + +S+ ++ + T +V + G++ A +LF EMP+R++
Sbjct: 209 GYIENDGMEEAKLLFGDMSEKNV-VTWTSMVYGY----CRYGDVREAYRLFCEMPERNIV 263
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLN--EGLIPDNAAFTVILTACS------------- 225
S+ +MI G + + +A+ LF +M + + P+ + AC
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQL 323
Query: 226 HGRLVEEGKHYFETMKSKYSMVPSPEH-YACMVDLLSRSGQLKEAYEL 272
H +++ G +ET+ + S H YA + S L E+++L
Sbjct: 324 HAQVISNG---WETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDL 368
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 59/284 (20%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGYAKVGDIASARA 67
R ++ A++ + G L++AR + D +P+R VV +T ++ YAK G + AR
Sbjct: 39 RRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARV 98
Query: 68 LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
LF+ P+R+ + +++GY + NEA +F+ M
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM------------------------ 134
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRANKLFEEMPKRDLFSYCSM 185
+VV+ + + A C G + A +LF+EMP+R++ S+ ++
Sbjct: 135 -------------------PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTL 175
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYS 245
+ GL +G E+A +F+ M + ++ NA ++ +EE K F M K
Sbjct: 176 VTGLIRNGDMEKAKQVFDAMPSRDVVSWNA----MIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 246 MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ + MV R G ++EAY L MP E + +W A++
Sbjct: 232 VT-----WTSMVYGYCRYGDVREAYRLFCEMP-ERNIVSWTAMI 269
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 187/295 (63%), Gaps = 5/295 (1%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
AR +FD+ P+ D W VL++GY + GL +E L++F+ M + ++PDE+ + + ++AC+Q
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
VG L KW+ ++ + V AL+DM AKCG ++ A ++FE++ +R++FS+ +
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
+I G + +GYA++A +++ E G+ PD+ +L AC+HG +EEG+ E M+++
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI 303
Y + P EHY+C+VDL+ R+G+L +A +L++ MP++ AS WGALL C+ + VELGE+
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 304 VANRLFELEP----ENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
L +LE E + V LS+IY + + + V+ +++RG+RK PG S
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM---ELMNVKPDEYIMVSLMSA 121
A ++FD ++F++ +I +++ P+ L+ F M E ++ P L+ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C + + K + C++ ++ + + HV ++ + + + A K+F+E+P+ D+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ ++ G G + + +F +ML G+ PD + T LTAC+ + +GK E +K
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
K + +VD+ ++ G ++ A E+ + + + +W AL+G YG +
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALIGGYAAYGYAKKA 304
Query: 302 EIVANRLFELEPENSSPYVLLSSIYAAA 329
+R+ + VLL + A A
Sbjct: 305 TTCLDRIEREDGIKPDSVVLLGVLAACA 332
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 44/238 (18%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-------------------- 41
+A++VF ++P+ ++ W+ ++ G V+ G +VF +M
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 42 --------------------PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
E DV T ++D YAK G I +A +F+K +R+ F W+
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWA 289
Query: 82 VLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAK-WVDCYLS 139
LI GYA G +A +E + +KPD +++ +++AC+ G L+ + ++ +
Sbjct: 290 ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS-YCSMIQGLSIHGYAE 196
+ I H + ++D+ + G +D A L E+MP + L S + +++ G H E
Sbjct: 350 RYGITPKHEH-YSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVE 406
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 206/345 (59%), Gaps = 9/345 (2%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
NA++ K G + +++F+++ E+ VVS+TV++D K + R +F + P+R+A
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI-MVSLMSACSQVGNLDLAKWVDCY 137
W+V+++GY G E L++ M ++ + S++SAC+Q GNL + +WV Y
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVY 269
Query: 138 LSQSSIDIGQ------THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+ + +G+ V AL+DM AKCGN+D + +F M KR++ ++ ++ GL++
Sbjct: 270 ALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAM 329
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
HG + +F +M+ E + PD+ FT +L+ACSH +V+EG F +++ Y + P +
Sbjct: 330 HGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVD 387
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL 311
HYACMVDLL R+G ++EA L++ MPV + G+LLG+C +G+VE+ E + L ++
Sbjct: 388 HYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQM 447
Query: 312 EPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
P N+ +L+S++Y A + ++ +++RG+RK+PG S I
Sbjct: 448 SPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 135/312 (43%), Gaps = 47/312 (15%)
Query: 56 YAKVGDIASARALFDKAP--KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
YA G++ +A+ LFD+ P ++D W+ L+S +++ GL ++K+F M V+ D+
Sbjct: 53 YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDV 112
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG----------- 162
+V L C+++ +L A+ + + + V AL+DM KCG
Sbjct: 113 SVVCLFGVCAKLEDLGFAQQGHGVAVKMGV-LTSVKVCNALMDMYGKCGLVSEVKRIFEE 171
Query: 163 --------------------NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
++R ++F EMP+R+ ++ M+ G G+ + + L
Sbjct: 172 LEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELL 231
Query: 203 NKML---NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY------ 253
+M+ GL + +L+AC+ + G+ K M+ Y
Sbjct: 232 AEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVG 289
Query: 254 ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG-EIVANRLFELE 312
+VD+ ++ G + + + + M + + W AL +G+ + ++ + E++
Sbjct: 290 TALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVK 348
Query: 313 PENSSPYVLLSS 324
P++ + +LS+
Sbjct: 349 PDDLTFTAVLSA 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 22/191 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE--RDV----VSFTVMID 54
D++ VF M +RN+ +WNA+ GL G R V D P+ R+V ++FT ++
Sbjct: 303 DSSMNVFRLMRKRNVVTWNALFSGLAMHG---KGRMVIDMFPQMIREVKPDDLTFTAVLS 359
Query: 55 GYAKVGDIASARALFDK------APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+ G + F PK D + V + G A GL EA + M M V
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRA--GLIEEAEIL---MREMPV 414
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
P+E ++ SL+ +CS G +++A+ + L Q S G T + +M G D A+
Sbjct: 415 PPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMS--PGNTEYQILMSNMYVAEGRSDIAD 472
Query: 169 KLFEEMPKRDL 179
L + KR +
Sbjct: 473 GLRGSLRKRGI 483
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 228 bits (581), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 200/341 (58%), Gaps = 7/341 (2%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
A+V VK G L +AR VF+ M + +VV T MI GY G + A +F+ +D
Sbjct: 179 TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIV 238
Query: 79 LWSVLISGYAQNG-LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
+++ ++ G++++G ++ ++ M+ P+ S++ ACS + + ++ + V
Sbjct: 239 VYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQ 298
Query: 138 LSQSSIDIGQTHVV--AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
+ +S + TH+ ++L+DM AKCG ++ A ++F++M ++++FS+ SMI G +G
Sbjct: 299 IMKSGV---YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP 355
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC 255
E+A+ LF +M + P+ F L+ACSH LV++G FE+M+ YSM P EHYAC
Sbjct: 356 EEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYAC 415
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN 315
+VDL+ R+G L +A+E ++MP + W ALL +C +G VEL I A+ LF+L +
Sbjct: 416 IVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADK 475
Query: 316 S-SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSW 355
Y+ LS++YA+ D+W +VS ++ MK R + K G SW
Sbjct: 476 RPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 44/298 (14%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
+ K G ++ AR +FD+ PK ++ +ISGY ++GL E L + Q M K D Y +
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSI---DIGQTHV-VAALIDMNAKCGNMDRANKLF 171
++ A + G+ + C L + I D+ V + AL+D K G ++ A +F
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN---------------------------- 203
E M ++ SMI G G+ E A +FN
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSV 258
Query: 204 ----KMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSK-YSMVPSPEHYACMV 257
M G P+ + F ++ ACS E G+ + + MKS Y+ + + + ++
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHI---KMGSSLL 315
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRL--FELEP 313
D+ ++ G + +A + M E + +W +++ G E + R+ F +EP
Sbjct: 316 DMYAKCGGINDARRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEP 372
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
++A+RVF QM E+N+ SW +M+ G K G+ A ++F M E + V+F +
Sbjct: 325 NDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 57 AKVGDIASARALFDK-------APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ G + +F+ PK + + V + G A G N+A F+ M +
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRA--GDLNKA---FEFARAMPER 439
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD I +L+S+C+ GN++LA L + + D + AL ++ A D +K
Sbjct: 440 PDSDIWAALLSSCNLHGNVELASIAASELFKLNAD-KRPGAYLALSNVYASNDKWDNVSK 498
Query: 170 LFEEMPKRDL 179
+ E M +R +
Sbjct: 499 IREVMKRRRI 508
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 222/397 (55%), Gaps = 44/397 (11%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMID--- 54
+A++VF +PE ++ S NA++ G + +L A +F +M R V ++F +++
Sbjct: 582 DARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 55 ------------------GYAKVGD---------------IASARALFDK-APKRDAFLW 80
G++ G+ + A ALF + + + LW
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ ++SG++QNG EALK ++ M V PD+ V+++ CS + +L + + +
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR-DLFSYCSMIQGLSIHGYAEQAV 199
+ D+ + LIDM AKCG+M ++++F+EM +R ++ S+ S+I G + +GYAE A+
Sbjct: 761 LAHDLDEL-TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDAL 819
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
+F+ M ++PD F +LTACSH V +G+ FE M +Y + +H ACMVDL
Sbjct: 820 KIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 879
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY 319
L R G L+EA + +++ ++ A W +LLGAC+ +G+ GEI A +L ELEP+NSS Y
Sbjct: 880 LGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAY 939
Query: 320 VLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
VLLS+IYA+ W + ++ M++RG++K+PG SWI
Sbjct: 940 VLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 151/297 (50%), Gaps = 13/297 (4%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYA 57
+A+RVF + + N W + G VK G A VF+ M + D ++F +I+ Y
Sbjct: 213 DARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYI 272
Query: 58 KVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS 117
++G + AR LF + D W+V+ISG+ + G A++ F M +VK + S
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEM 174
++SA V NLDL V +I +G +V ++L+ M +KC M+ A K+FE +
Sbjct: 333 VLSAIGIVANLDLGLVVHA----EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
+++ + +MI+G + +G + + + LF M + G D+ FT +L+ C+ +E G
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
F ++ K + + +VD+ ++ G L++A ++ + M + + W ++G+
Sbjct: 449 Q-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT-WNTIIGS 503
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 52/281 (18%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFT-------- 50
A +VF + E+N WNAM+ G G+ ++F DM D +FT
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 51 ---------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++D YAK G + AR +F++ RD W+ +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I Y Q+ +EA +F+ M L + D + S + AC+ V L K V C + +
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL 560
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
D H ++LIDM +KCG + A K+F +P+ + S ++I G S E+AV LF
Sbjct: 561 D-RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQ 618
Query: 204 KMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG 233
+ML G+ P F I+ AC HG++ + G
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 149/335 (44%), Gaps = 54/335 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
++A+++F +M +R+ +WN ++G V+ + A +F M
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+RD+ + + +ID Y+K G I AR +F P+ +
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LI+GY+QN L EA+ +FQ M V P E +++ AC + +L L +++
Sbjct: 600 ALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR 658
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAVG 200
++ +L+ M M A LF E+ + + + M+ G S +G+ E+A+
Sbjct: 659 GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK 718
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH------YA 254
+ +M ++G++PD A F +L CS + EG ++ +S++ H
Sbjct: 719 FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-------RAIHSLIFHLAHDLDELTSN 771
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
++D+ ++ G +K + ++ M S+ +W +L+
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 138/315 (43%), Gaps = 41/315 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSF------------ 49
+A+ +F +M ++ +WN M+ G K G A + F +M + V S
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 50 ---------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ ++ Y+K + +A +F+ +++ W+
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA 398
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I GYA NG ++ +++F M+ D++ SL+S C+ +L++ + +
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V AL+DM AKCG ++ A ++FE M RD ++ ++I +A LF
Sbjct: 459 L-AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M G++ D A L AC+H + +GK + K + + ++D+ S+
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSK 576
Query: 263 SGQLKEAYELLKSMP 277
G +K+A ++ S+P
Sbjct: 577 CGIIKDARKVFSSLP 591
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 34/300 (11%)
Query: 31 LINARKVFDDMPERDVVSFTV----------------------MIDGYAKVGDIASARAL 68
L +RKVFD+MP+R ++ + ++D YAK ++ A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 69 FDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
FD K D W+ ++S Y+ G P + L+ F + + P+++ ++S C++ N+
Sbjct: 118 FDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNV 176
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
+ + + C + + ++ ++ AL+DM AKC + A ++FE + + + + G
Sbjct: 177 EFGRQIHCSMIKMGLE-RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAF-TVILTACSHGRLVEEGKHYFETMKSKYSMV 247
G E+AV +F +M +EG PD+ AF TVI T G+L ++ + F M S
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL-KDARLLFGEMSS----- 289
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALLGACKFYGEVELGEIV 304
P + M+ + G A E +M V+S S G++L A ++LG +V
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 17/266 (6%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
ER+ ++D YAK I+ AR +F+ + W+ L SGY + GLP EA+ +F+
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M +PD V++++ ++G L A+ + + SS D+ +V +I + K G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLL--FGEMSSPDVVAWNV---MISGHGKRG 306
Query: 163 NMDRANKLFEEMPKRDLFS----YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
A + F M K + S S++ + I + + + + + GL + +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 219 VILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
+++ S +E FE ++ K + + M+ + +G+ + EL M
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVF-----WNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 279 ESHA---SAWGALLGACKFYGEVELG 301
+ + +LL C ++E+G
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMG 447
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 199/334 (59%), Gaps = 7/334 (2%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
++ G I+ +VF E DV +I+ Y + G++ + A+F+K + A WS ++S
Sbjct: 148 IREGKQIHG-QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVS 206
Query: 86 GYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
A G+ +E L +F+GM N+K +E MVS + AC+ G L+L + +L + +
Sbjct: 207 ARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR---N 263
Query: 145 IGQTHVV--AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I + +++ +L+DM KCG +D+A +F++M KR+ +Y +MI GL++HG E A+ +F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+KM+ EGL PD+ + +L ACSH LV+EG+ F M + + P+ EHY C+VDLL R
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
+G L+EA E ++S+P+E + W L C+ +ELG+I A L +L N Y+L+
Sbjct: 384 AGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLI 443
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S++Y+ W DV+ + ++ +GL++ PG S +
Sbjct: 444 SNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIV 477
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 188/329 (57%), Gaps = 1/329 (0%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G + A K+F ++ D + MI Y G I A+ +F++ + W+ + +G
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
++QNG E L+ F M +++ DE + S++SAC+ + +L+L + V + +D
Sbjct: 425 FSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSD 484
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
Q V ++LID+ KCG ++ ++F+ M K D + SMI G + +G +A+ LF KM
Sbjct: 485 QV-VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
G+ P F V+LTAC++ LVEEG+ FE+MK + VP EH++CMVDLL+R+G +
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIY 326
+EA L++ MP + S W ++L C G +G+ A ++ ELEPENS YV LS+I+
Sbjct: 604 EEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIF 663
Query: 327 AAADQWLDVSHVKNKMKERGLRKLPGCSW 355
A + W + V+ M+E + K PG SW
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 149/309 (48%), Gaps = 37/309 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDI 62
A+ +F +MP+RN SWN M+ G + G+ + + FD MPERD S+ V++ G+AK G++
Sbjct: 81 ARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGEL 140
Query: 63 ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
+ AR LF+ P++D + L+ GY NG EAL++F+ +N D + +++ AC
Sbjct: 141 SVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE---LNFSADAITLTTVLKAC 197
Query: 123 SQVGNLDLAKWV-----------DCYLSQSSIDI-------------------GQTHVVA 152
+++ L K + D ++ S +++ H ++
Sbjct: 198 AELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLS 257
Query: 153 ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
ALI A CG ++ + LF+ R + + SMI G + +A+ LFN+M NE
Sbjct: 258 ALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR-E 316
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
D+ ++ AC +E GK K+ ++ + ++D+ S+ G EA +L
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQ-MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 273 LKSMPVESH 281
VES+
Sbjct: 376 FS--EVESY 382
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 150/361 (41%), Gaps = 80/361 (22%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
+++V K GDL A + + + E D S + +I GYA G + +R LFD+ R
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
LW+ +ISGY N + EAL +F M + D + ++++AC +G L+ K + C+
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGN-------------------------------MDRA 167
+ + I V + L+DM +KCG+ +D A
Sbjct: 345 CKFGL-IDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDA 403
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-- 225
++FE + + L S+ SM G S +G + + F++M L D + + +++AC+
Sbjct: 404 KRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASI 463
Query: 226 ---------------------------------HGRLVEEGKHYFETMKSKYSMVPSPEH 252
VE G+ F+TM K VP
Sbjct: 464 SSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVP---- 518
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPV---ESHASAWGALLGACKFYGEVELGEIVANRLF 309
+ M+ + +GQ EA +L K M V + +L AC + G VE G +LF
Sbjct: 519 WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGR----KLF 574
Query: 310 E 310
E
Sbjct: 575 E 575
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 50/267 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFD-----DMP------------- 42
D+AKRVF ++ ++L SWN+M G + G + + F D+P
Sbjct: 401 DDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISAC 460
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ D V + +ID Y K G + R +FD K D W+
Sbjct: 461 ASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWN 520
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGYA NG EA+ +F+ M + ++P + + +++AC+ G ++ + +
Sbjct: 521 SMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL---FESM 577
Query: 142 SIDIG----QTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAE 196
+D G + H + ++D+ A+ G ++ A L EEMP D + S+++G +GY
Sbjct: 578 KVDHGFVPDKEH-FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKA 636
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTA 223
K++ L P+N+ V L+A
Sbjct: 637 MGKKAAEKIIE--LEPENSVAYVQLSA 661
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 196/345 (56%), Gaps = 10/345 (2%)
Query: 20 AMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL 79
A++ VK L +AR+ FDD + +VVS T +I GY K + A +LF P+R
Sbjct: 12 AVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVT 71
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVK-PDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I G++Q G EA+ F M V P+E ++A S + + K +
Sbjct: 72 WNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACA 131
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRA----NKLFEEMPKRDLFSYCSMIQGLSIHGY 194
+ V +LI +KCGNM+ + NKL EE +R++ S+ SMI G + +G
Sbjct: 132 IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEE--QRNIVSWNSMIWGYAHNGR 189
Query: 195 AEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYS--MVPSPE 251
E+AV +F KM+ + L P+N +L AC+H L++EG YF + Y + E
Sbjct: 190 GEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELE 249
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL 311
HYACMVD+LSRSG+ KEA EL+KSMP++ W ALLG C+ + L ++ A+++ EL
Sbjct: 250 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILEL 309
Query: 312 EPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+P + S YV+LS+ Y+A + W +VS ++ KMKE GL++ GCSWI
Sbjct: 310 DPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWI 354
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 188/306 (61%), Gaps = 2/306 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+ID YAK G + A +F++ KRD W+ +I+ AQ+ P+ A+ IF+ M + + D
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYD 541
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ + +SAC+ + + K + ++ + S+ + + LIDM AKCGN+ A +F
Sbjct: 542 CVSISAALSACANLPSESFGKAIHGFMIKHSL-ASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTACSHGRLV 230
+ M ++++ S+ S+I HG + ++ LF++M+ + G+ PD F I+++C H V
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
+EG +F +M Y + P EHYAC+VDL R+G+L EAYE +KSMP A WG LLG
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKL 350
AC+ + VEL E+ +++L +L+P NS YVL+S+ +A A +W V+ V++ MKER ++K+
Sbjct: 721 ACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKI 780
Query: 351 PGCSWI 356
PG SWI
Sbjct: 781 PGYSWI 786
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 182/390 (46%), Gaps = 45/390 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFT------ 50
D+A ++F M + +WN M+ G V+ G + + F +M D ++F+
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 51 -----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ID Y K ++ A+ +F + D +++
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGY NGL ++L++F+ + + + P+E +VS++ + L L + + ++ +
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D + ++ A+IDM AKCG M+ A ++FE + KRD+ S+ SMI + A+ +
Sbjct: 471 GFD-NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F +M G+ D + + L+AC++ GK M K+S+ + ++D+ +
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSLASDVYSESTLIDMYA 588
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE---LEPENSSP 318
+ G LK A + K+M E + +W +++ AC +G+++ + + + E + P+ +
Sbjct: 589 KCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITF 647
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
++SS D V ++ ++ G++
Sbjct: 648 LEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y + G I LFD+ ++D +W+V+++GYA+ G + +K F M + + P+
Sbjct: 179 LIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPN 238
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
++S C+ +DL + + S +D + + +L+ M +KCG D A+KLF
Sbjct: 239 AVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDF-EGSIKNSLLSMYSKCGRFDDASKLF 297
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
M + D ++ MI G G E+++ F +M++ G++PD F+ +L + S +E
Sbjct: 298 RMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE 357
Query: 232 EGKH 235
K
Sbjct: 358 YCKQ 361
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 139/334 (41%), Gaps = 48/334 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFD----DMPERDVVSF------- 49
D ++F ++ +++ WN M+ G K G L + K F D + V+F
Sbjct: 190 DVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC 249
Query: 50 --------------TVMIDG--------------YAKVGDIASARALFDKAPKRDAFLWS 81
V++ G Y+K G A LF + D W+
Sbjct: 250 ASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWN 309
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGY Q+GL E+L F M V PD SL+ + S+ NL+ K + CY+ +
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
SI + + +ALID KC + A +F + D+ + +MI G +G ++ +
Sbjct: 370 SISL-DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYAC-MVD 258
F ++ + P+ IL ++ G+ H F K + + C ++D
Sbjct: 429 FRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG----FDNRCNIGCAVID 484
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
+ ++ G++ AYE+ + + S W +++ C
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRC 517
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 56 YAKVGDIASARALFDKAPKRDAFL--WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
YA G + +F + R + + W+ +IS + +NGL N+AL + M V PD
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
L+ AC + N ++ +S +D + V ++LI + G +D +KLF+
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE-FVASSLIKAYLEYGKIDVPSKLFDR 198
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-------- 225
+ ++D + M+ G + G + + F+ M + + P+ F +L+ C+
Sbjct: 199 VLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG 258
Query: 226 ---HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
HG +V G + ++K+ ++ + S+ G+ +A +L + M +
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNS------------LLSMYSKCGRFDDASKLFRMMS-RADT 305
Query: 283 SAWGALLGA 291
W ++
Sbjct: 306 VTWNCMISG 314
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 201/396 (50%), Gaps = 42/396 (10%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--------PERDVVSFTV-- 51
+A VF M E+++ +W +++ GL K G A KVF DM P+ D+++
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 52 -------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLW 80
+ID Y+K G A +F + W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +IS Y++N LP ++ +F M + PD + S++ A S +L K + Y +
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
I TH+ ALIDM KCG A +F++M + L ++ MI G HG A+
Sbjct: 606 LGIP-SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF++M G PD+ F +++AC+H VEEGK+ FE MK Y + P+ EHYA MVDLL
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R+G L+EAY +K+MP+E+ +S W LL A + + VELG + A +L +EPE S YV
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L ++Y A + + + MKE+GL K PGCSWI
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 59/363 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV--------- 51
A+ VF + ++ L WNAMV + +A +F M ++ V+ SFT+
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++ Y+K G A +F ++D W L
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 84 ISGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
ISG +NG EALK+F M + ++KPD IM S+ +AC+ + L V + ++
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + V ++LID+ +KCG + A K+F M ++ ++ SMI S + E ++ L
Sbjct: 506 GL-VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDL 564
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM---VPSPEHYA-CMV 257
FN ML++G+ PD+ + T +L A S + +GK Y++ +PS H ++
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-----HGYTLRLGIPSDTHLKNALI 619
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE-IVANRLF-ELEPEN 315
D+ + G K A + K M +S + W ++ YG G+ I A LF E++
Sbjct: 620 DMYVKCGFSKYAENIFKKMQHKSLIT-WNLMI-----YGYGSHGDCITALSLFDEMKKAG 673
Query: 316 SSP 318
SP
Sbjct: 674 ESP 676
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 123/242 (50%), Gaps = 5/242 (2%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++ Y+K G + A +F + +W+ +++ YA+N AL +F M +V
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD + + +++S CS +G + K V L + I T + +AL+ + +KCG A
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST-IESALLTLYSKCGCDPDAYL 429
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML--NEGLIPDNAAFTVILTACSHG 227
+F+ M ++D+ ++ S+I GL +G ++A+ +F M ++ L PD+ T + AC+
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
+ G +M K +V + + ++DL S+ G + A ++ SM E+ AW +
Sbjct: 490 EALRFGLQVHGSMI-KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV-AWNS 547
Query: 288 LL 289
++
Sbjct: 548 MI 549
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 9/254 (3%)
Query: 45 DVVSF--TVMIDGYAKVG-DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
D SF T +ID Y K G I + R + K + LW+V+I G+ +G+ +L ++
Sbjct: 202 DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
+ +VK + ACSQ N + + C + + + +V +L+ M +KC
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH-NDPYVCTSLLSMYSKC 320
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G + A +F + + L + +M+ + + Y A+ LF M + ++PD+ + ++
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 222 TACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
+ CS L GK + E K + E + ++ L S+ G +AY + KSM E
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSME-EK 437
Query: 281 HASAWGALL-GACK 293
AWG+L+ G CK
Sbjct: 438 DMVAWGSLISGLCK 451
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 22/265 (8%)
Query: 50 TVMIDGYAKVGDIASARALFDK-------APKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
T +++ Y K G + A +FD RD +W+ +I GY + E + F+
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNL--DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAK 160
M + V+PD + + ++S + GN + K + ++ ++S+D + + ALIDM K
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT-DSFLKTALIDMYFK 217
Query: 161 CGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
G A ++F E+ K ++ + MI G G E ++ L+ N + + +FT
Sbjct: 218 FGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTG 277
Query: 220 ILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSM 276
L ACS G+ + + +K M + Y C ++ + S+ G + EA E + S
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVK----MGLHNDPYVCTSLLSMYSKCGMVGEA-ETVFSC 332
Query: 277 PVESHASAWGALLGACKFYGEVELG 301
V+ W A++ A Y E + G
Sbjct: 333 VVDKRLEIWNAMVAA---YAENDYG 354
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAK 58
A+ +F +M ++L +WN M+ G GD I A +FD+M + D V+F +I
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH 690
Query: 59 VGDIASARALF-----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
G + + +F D + + ++ ++ + GL EA + M ++ D
Sbjct: 691 SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMP---IEADSS 747
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
I + L+SA N++L L + + G T+V LI++ + G + A KL
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV--QLINLYMEAGLKNEAAKLLGL 805
Query: 174 MPKRDLFSY--CSMIQ 187
M ++ L CS I+
Sbjct: 806 MKEKGLHKQPGCSWIE 821
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 208/396 (52%), Gaps = 47/396 (11%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDG-- 55
NA+RVF + +L W AM+ G G + A +F M ++ V+ ++ G
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Query: 56 --------------------------------YAKVGDIASARALFDKAPKRDAFLWSVL 83
YAK A+ +F+ ++D W+ +
Sbjct: 355 LIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 414
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISG++QNG +EAL +F M +V P+ + SL SAC+ +G+L + + Y S+
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY----SV 470
Query: 144 DIG-----QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+G HV AL+D AKCG+ A +F+ + +++ ++ +MI G G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ LF +ML + P+ + FT IL+AC H +V EGK YF +M Y+ PS +HY CMVD
Sbjct: 531 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 590
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+L+R+G+L++A ++++ MP++ +GA L C + +LGEIV ++ +L P+++S
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 650
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
YVL+S++YA+ +W V+N MK+RGL K+ G S
Sbjct: 651 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 47/332 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS------------- 48
+A +VF + RN+ W +M+ G VK +F+ M E +V+
Sbjct: 194 SAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT 253
Query: 49 --------------------------FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
T ++D Y K GDI++AR +F++ D +W+
Sbjct: 254 KLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA 313
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I GY NG NEAL +FQ M+ + +KP+ + S++S C + NL+L + V S
Sbjct: 314 MIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVH----GLS 369
Query: 143 IDIG--QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
I +G T+V AL+ M AKC A +FE ++D+ ++ S+I G S +G +A+
Sbjct: 370 IKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALF 429
Query: 201 LFNKMLNEGLIPDNAAFTVILTAC-SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
LF++M +E + P+ + +AC S G L + ++K + S ++D
Sbjct: 430 LFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDF 489
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
++ G + A + ++ E + W A++G
Sbjct: 490 YAKCGDPQSARLIFDTIE-EKNTITWSAMIGG 520
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 46/312 (14%)
Query: 30 DLINARKVFDDM---PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
DL N +K+ + P D V T ++D YAK G+I SA +F+ R+ W+ +I+G
Sbjct: 157 DLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Y +N L E L +F M NV +EY +L+ AC+++ L KW L +S I++
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
+V +L+DM KCG++ A ++F E DL + +MI G + +G +A+ LF KM
Sbjct: 277 SC-LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Query: 207 NEGLIPDNAAFTVILTACS-----------HGRLVEEG---------------------- 233
+ P+ +L+ C HG ++ G
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRD 395
Query: 234 -KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES---HASAWGALL 289
K+ FE M+S+ +V + ++ S++G + EA L M ES + +L
Sbjct: 396 AKYVFE-MESEKDIVA----WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 290 GACKFYGEVELG 301
AC G + +G
Sbjct: 451 SACASLGSLAVG 462
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 5/226 (2%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ T ++ Y G AR +FD+ P+ D +LW V++ Y N E +K++ +
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ-SSIDIGQTHVVAALIDMNAKCGN 163
+ D+ + + AC+++ +LD K + C L + S D V+ L+DM AKCG
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFD---NVVLTGLLDMYAKCGE 191
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ A+K+F ++ R++ + SMI G + E+ + LFN+M ++ + + ++ A
Sbjct: 192 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 251
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
C+ + +GK +F K + S ++D+ + G + A
Sbjct: 252 CTKLSALHQGK-WFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 211/394 (53%), Gaps = 44/394 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE-------RDVVSF------ 49
A+++F ++ ER+ SWN+M+ G + G +A +F M E R +VS
Sbjct: 182 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 241
Query: 50 --------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ +I Y K GD+ SAR +F++ K+D W+ +
Sbjct: 242 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 301
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+ Y+QNG +EA K+F ME V PD + +++SAC VG L+L K ++ + S+ S+
Sbjct: 302 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 361
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+V L+DM KCG ++ A ++FE MP ++ ++ +MI + G+A++A+ LF+
Sbjct: 362 Q-HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 420
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M + P + F +L+AC H LV +G YF M S + +VP EHY ++DLLSR+
Sbjct: 421 RM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 477
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL-EPENSSPYVLL 322
G L EA+E ++ P + A+LGAC +V + E L E+ E +N+ YV+
Sbjct: 478 GMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVIS 537
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S++ A W + + ++ M++RG+ K PGCSWI
Sbjct: 538 SNVLADMKMWDESAKMRALMRDRGVVKTPGCSWI 571
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 149/266 (56%), Gaps = 3/266 (1%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
ERDV +I YAK G + AR LFD+ +RD W+ +ISGY++ G +A+ +F+
Sbjct: 160 ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRK 219
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
ME +PDE +VS++ ACS +G+L + ++ I + T + + LI M KCG
Sbjct: 220 MEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL-STFLGSKLISMYGKCG 278
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
++D A ++F +M K+D ++ +MI S +G + +A LF +M G+ PD + +L+
Sbjct: 279 DLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 338
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
AC +E GK ET S+ S+ + +VD+ + G+++EA + ++MPV++ A
Sbjct: 339 ACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA 397
Query: 283 SAWGALLGACKFYGEVELGEIVANRL 308
+ W A++ A G + ++ +R+
Sbjct: 398 T-WNAMITAYAHQGHAKEALLLFDRM 422
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 45/321 (14%)
Query: 35 RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPN 94
R++ M V +I ++GD + LF + + + ++ +I G +
Sbjct: 50 RQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDH 109
Query: 95 EA-LKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA 153
EA L +++ M+ +KPD++ + AC+++ + + + V L + ++ H+ +
Sbjct: 110 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLE-RDVHINHS 168
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
LI M AKCG + A KLF+E+ +RD S+ SMI G S GYA+ A+ LF KM EG PD
Sbjct: 169 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 228
Query: 214 NAAFTVILTACSH------GRLVEE-----------------------------GKHYFE 238
+L ACSH GRL+EE + F
Sbjct: 229 ERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFN 288
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP---VESHASAWGALLGACKFY 295
M K + + M+ + S++G+ EA++L M V A +L AC
Sbjct: 289 QMIKKDRVA-----WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSV 343
Query: 296 GEVELGEIVANRLFELEPENS 316
G +ELG+ + EL +++
Sbjct: 344 GALELGKQIETHASELSLQHN 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 48/219 (21%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------ 42
D+A+RVF QM +++ +W AM+ + G A K+F +M
Sbjct: 281 DSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSAC 340
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ ++ T ++D Y K G + A +F+ P ++ W+
Sbjct: 341 GSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWN 400
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+ YA G EAL +F + M+V P + + ++SAC G L Y +
Sbjct: 401 AMITAYAHQGHAKEALLLF---DRMSVPPSDITFIGVLSACVHAG---LVHQGCRYFHEM 454
Query: 142 SIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
S G + +ID+ ++ G +D A + E P +
Sbjct: 455 SSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 493
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 192/315 (60%), Gaps = 11/315 (3%)
Query: 50 TVMIDGYAKVGDIASARALFDKAP-KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
T ++ Y+ VGD+ AR +FD+ P K++ LW+ +IS Y +N EA+++F+ ME +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRA 167
+ D I+ +SAC+ +G + + + + + + + +L++M K G ++A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM------LNEGLIPDNAAFTVIL 221
KLF+E ++D+ +Y SMI G +++G A++++ LF KM + + P++ F +L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
ACSH LVEEGK +F++M Y++ P H+ CMVDL RSG LK+A+E + MP++ +
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNK 341
W LLGAC +G VELGE V R+FEL+ ++ YV LS+IYA+ W + S ++++
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 342 MKERGLRKLPGCSWI 356
+++ R++PG SWI
Sbjct: 404 VRK---RRMPGKSWI 415
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 204/365 (55%), Gaps = 13/365 (3%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYA 57
NA++VF + E++L +NAM+ G A + DM + DV+++ +I G++
Sbjct: 170 NARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS 229
Query: 58 ------KVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
KV +I L P D W+ +ISG N +A F+ M + P+
Sbjct: 230 HMRNEEKVSEILELMCLDGYKP--DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPN 287
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+++L+ AC+ + + K + Y + ++ V +AL+DM KCG + A LF
Sbjct: 288 SATIITLLPACTTLAYMKHGKEIHGYSVVTGLE-DHGFVRSALLDMYGKCGFISEAMILF 346
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ PK+ ++ SMI + HG A++AV LF++M G D+ FT ILTACSH L +
Sbjct: 347 RKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
G++ F M++KY +VP EHYACMVDLL R+G+L EAYE++K+M +E WGALL A
Sbjct: 407 LGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAA 466
Query: 292 CKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLP 351
C+ +G +EL I A L ELEPENS +LL+S+YA A W V +K +K++ R+
Sbjct: 467 CRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFL 526
Query: 352 GCSWI 356
G SW+
Sbjct: 527 GSSWV 531
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 5/244 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++ Y + G + AR +FD+ PKRD V+I A+NG E+L F+ M +K D
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+I+ SL+ A + + + K + C + + S + +V++LIDM +K G + A K+F
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE-SDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
++ ++DL + +MI G + + A++A+ L M G+ PD + +++ SH R E
Sbjct: 176 SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEE 235
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES---HASAWGAL 288
+ E M P + ++ L + Q ++A++ K M +++ L
Sbjct: 236 KVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITL 294
Query: 289 LGAC 292
L AC
Sbjct: 295 LPAC 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 136/329 (41%), Gaps = 88/329 (26%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-------------------- 41
+A++VF +MP+R+++ M+G + G + F +M
Sbjct: 69 DARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASR 128
Query: 42 -------------------PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
E D + +ID Y+K G++ +AR +F ++D +++
Sbjct: 129 NLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNA 188
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGYA N +EAL + + M+L+ +KPD +L+S S +
Sbjct: 189 MISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM----------------- 231
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP----KRDLFSYCSMIQGLSIHGYAEQA 198
N ++ +++ E M K D+ S+ S+I GL + E+A
Sbjct: 232 -------------------RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY----A 254
F +ML GL P++A +L AC+ ++ GK YS+V E + +
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI-----HGYSVVTGLEDHGFVRS 327
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHAS 283
++D+ + G + EA L + P ++ +
Sbjct: 328 ALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 148 THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
T + A L+ +CG + A K+F+EMPKRD+ MI + +GY ++++ F +M
Sbjct: 51 TRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYK 110
Query: 208 EGLIPDNAAFTV-ILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
+GL D AF V L S L E + K+S + ++D+ S+ G++
Sbjct: 111 DGLKLD--AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEV 168
Query: 267 KEAYELLKSM 276
A ++ +
Sbjct: 169 GNARKVFSDL 178
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 186/312 (59%), Gaps = 5/312 (1%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-E 104
V + ++I+ K+G+ A+ + A ++ W+++I GY +N EALK + M
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
++KP+++ S ++AC+++G+L AKWV + S I++ + +AL+D+ AKCG++
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDI 216
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ ++F + + D+ + +MI G + HG A +A+ +F++M E + PD+ F +LT C
Sbjct: 217 GTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTC 276
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
SH L+EEGK YF M ++S+ P EHY MVDLL R+G++KEAYEL++SMP+E
Sbjct: 277 SHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVI 336
Query: 285 WGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
W +LL + + Y ELGEI L S YVLLS+IY++ +W V+ M +
Sbjct: 337 WRSLLSSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSK 393
Query: 345 RGLRKLPGCSWI 356
G+RK G SW+
Sbjct: 394 EGIRKAKGKSWL 405
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 42/214 (19%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKG---------------------------------- 28
AK+V ++N+ +WN M+GG V+
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 29 --GDLINARKV----FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
GDL +A+ V D E + + + ++D YAK GDI ++R +F + D +W+
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS- 141
+I+G+A +GL EA+++F ME +V PD + L++ CS G L+ K +S+
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
SI H A++D+ + G + A +L E MP
Sbjct: 297 SIQPKLEH-YGAMVDLLGRAGRVKEAYELIESMP 329
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 213/397 (53%), Gaps = 42/397 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF------DDMP------------ 42
D+A+++F ++PERNL +WNA + V G A + F D P
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 43 ---------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ DV +ID Y K I S+ +F + ++A W
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L++ Y QN +A ++ V+ ++++ S++SAC+ + L+L + + + ++
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ V +AL+DM KCG ++ + + F+EMP+++L + S+I G + G + A+ L
Sbjct: 340 CVE-RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALAL 398
Query: 202 FNKMLNEGL--IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
F +M G P+ F +L+ACS VE G F++M+S Y + P EHY+C+VD+
Sbjct: 399 FEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM 458
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY 319
L R+G ++ AYE +K MP++ S WGAL AC+ +G+ +LG + A LF+L+P++S +
Sbjct: 459 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNH 518
Query: 320 VLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
VLLS+ +AAA +W + + V+ ++K G++K G SWI
Sbjct: 519 VLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 159/390 (40%), Gaps = 61/390 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV------- 51
++A+ V P RN+ SW +++ GL + G A F +M VV FT
Sbjct: 59 ESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAV 118
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
D Y K AR LFD+ P+R+ W+
Sbjct: 119 ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWN 178
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
IS +G P EA++ F ++ P+ + ++ACS +L+L + + +S
Sbjct: 179 AFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 238
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D V LID KC + + +F EM ++ S+CS++ + E+A L
Sbjct: 239 GFDT-DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKYSMVPSPEHYACMV 257
+ + + + + + +L+AC+ +E G+ H + + V S +V
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA-----LV 352
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF-ELEPENS 316
D+ + G ++++ + MP E + +L+G G+V++ A LF E+ P
Sbjct: 353 DMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDM----ALALFEEMAPRGC 407
Query: 317 SP---YVLLSSIYAAADQWLDVSHVKNKMK 343
P Y+ S+ +A + V+N MK
Sbjct: 408 GPTPNYMTFVSLLSACSR---AGAVENGMK 434
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 33/288 (11%)
Query: 19 NAMVGGLVKGGDLINAR--KVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRD 76
NA+ ++ G +++AR K D P + ++ +I+ Y+K+ SAR + P R+
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLTPARN 72
Query: 77 AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
W+ LISG AQNG + AL F M V P+++ A + + K +
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
L+ I V + DM K D A KLF+E+P+R+L ++ + I G
Sbjct: 133 -LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYS 245
+A+ F + P++ F L ACS HG ++ G F+T S
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG---FDTDVS--- 245
Query: 246 MVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
C ++D + Q++ + + M + +A +W +L+ A
Sbjct: 246 --------VCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 200/396 (50%), Gaps = 44/396 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD----------------- 45
A+RVF ++N +W+AM+GG V+ + A +VF M D
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGC 318
Query: 46 ---------------------VVSFTV---MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++ TV +I YAK G + A F + +D ++
Sbjct: 319 ARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYN 378
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LI+G N P E+ ++F M ++PD ++ +++ACS + L Y
Sbjct: 379 SLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVH 438
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ T + AL+DM KCG +D A ++F+ M KRD+ S+ +M+ G IHG ++A+ L
Sbjct: 439 GYAV-NTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSL 497
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM-KSKYSMVPSPEHYACMVDLL 260
FN M G+ PD IL+ACSH LV+EGK F +M + ++++P +HY CM DLL
Sbjct: 498 FNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLL 557
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
+R+G L EAY+ + MP E G LL AC Y ELG V+ ++ L E + V
Sbjct: 558 ARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLV 616
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LLS+ Y+AA++W D + ++ K+RGL K PG SW+
Sbjct: 617 LLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 9/217 (4%)
Query: 26 VKGGDLINARKVFDDMPERDVV--SFTVMIDG---YAKVGDIASARALFDKAP--KRDAF 78
++ +L+ + + + +R + S TV+++ YA ++ AR +FD+ P + +
Sbjct: 10 IRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPI 69
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W ++I YA N +AL ++ M V+P +Y ++ AC+ + +D K + ++
Sbjct: 70 AWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHV 129
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ S +V AL+D AKCG ++ A K+F+EMPKRD+ ++ +MI G S+H
Sbjct: 130 NCSDFAT-DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188
Query: 199 VGLFNKMLN-EGLIPDNAAFTVILTACSHGRLVEEGK 234
+GLF M +GL P+ + + A + EGK
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 95/180 (52%), Gaps = 8/180 (4%)
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
+ +SL+ C + NL L + + +L + S+ + + V+ L + A C ++ A +F+E
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 174 M--PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+ P+ + ++ MI+ + + +AE+A+ L+ KMLN G+ P + +L AC+ R ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 232 EGKHYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+GK + + + Y C +VD ++ G+L+ A ++ MP + AW A++
Sbjct: 121 DGKLIHSHVNCSDF---ATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMI 176
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
+ G LI++ D D+ T ++D YAK G++ A +FD+ PKRD W+ +IS
Sbjct: 119 IDDGKLIHSHVNCSDFAT-DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMIS 177
Query: 86 GYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
G++ + + + +F M ++ + P+ +V + A + G L K V Y ++
Sbjct: 178 GFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFS 237
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V ++D+ AK + A ++F+ K++ ++ +MI G + ++A +F +
Sbjct: 238 -NDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQ 296
Query: 205 MLNEGLIPDNAAFT------VILTACS 225
M L+ DN A +IL C+
Sbjct: 297 M----LVNDNVAMVTPVAIGLILMGCA 319
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 192/328 (58%), Gaps = 9/328 (2%)
Query: 33 NARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALF---DKAPKRDAFLWSVLISGY-- 87
+ARK+FD++P+R+ V + MI Y G + A L+ D P +F + +I G
Sbjct: 101 HARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSF--NAIIKGLVG 158
Query: 88 AQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ 147
++G A++ ++ M KP+ +++L+SACS +G L K + Y ++ I+
Sbjct: 159 TEDG-SYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIE-PH 216
Query: 148 THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
+ + L++ +CG++ +F+ M RD+ ++ S+I ++HG AE A+ F +M
Sbjct: 217 PQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMEL 276
Query: 208 EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLK 267
+ PD+ AF +L ACSH L +E YF+ M+ Y + S +HY+C+VD+LSR G+ +
Sbjct: 277 AKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFE 336
Query: 268 EAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYA 327
EAY+++++MP + A WGALLGAC+ YGE+EL EI A L +EPEN + YVLL IY
Sbjct: 337 EAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYM 396
Query: 328 AADQWLDVSHVKNKMKERGLRKLPGCSW 355
+ + + ++ KMKE G++ PG SW
Sbjct: 397 SVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKP-DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+S YA G +AL +F M P D ++ + +C+ L V + +S+
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V AL+DM KC ++ A KLF+E+P+R+ + +MI + G ++AV L+
Sbjct: 79 F-LSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELY 137
Query: 203 NKMLNEGLIPDNAAFTVIL 221
M ++P+ ++F I+
Sbjct: 138 EAM---DVMPNESSFNAII 153
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 201/379 (53%), Gaps = 37/379 (9%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMP------------------------------- 42
N+ SW AM+ G ++ A +F +M
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 43 ----ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALK 98
ER T ++D Y K+G + A +F +D WS +++GYAQ G A+K
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQV-GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDM 157
+F + +KP+E+ S+++ C+ ++ K + +S +D V +AL+ M
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD-SSLCVSSALLTM 539
Query: 158 NAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF 217
AK GN++ A ++F+ ++DL S+ SMI G + HG A +A+ +F +M + D F
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 218 TVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
+ AC+H LVEEG+ YF+ M + P+ EH +CMVDL SR+GQL++A +++++MP
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Query: 278 VESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSH 337
+ ++ W +L AC+ + + ELG + A ++ ++PE+S+ YVLLS++YA + W + +
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 338 VKNKMKERGLRKLPGCSWI 356
V+ M ER ++K PG SWI
Sbjct: 720 VRKLMNERNVKKEPGYSWI 738
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 156/357 (43%), Gaps = 57/357 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV-------- 51
+ ++VF +M ERN+ +W ++ G + +F M SFT
Sbjct: 146 DGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLA 205
Query: 52 -----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+I+ Y K G++ AR LFDK + W+
Sbjct: 206 EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISGYA NGL EAL +F M L V+ E S++ C+ + L + + C + +
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGL 201
Q ++ AL+ +KC M A +LF+E+ ++ S+ +MI G + E+AV L
Sbjct: 326 FLFDQ-NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F++M +G+ P+ ++VILTA ++ + + + +K+ Y S ++D
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYE--RSSTVGTALLDAYV 439
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALL----------GACKFYGEVELGEIVANRL 308
+ G+++EA ++ + + AW A+L A K +GE+ G I N
Sbjct: 440 KLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 118/245 (48%), Gaps = 2/245 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV T ++D Y K + R +FD+ +R+ W+ LISGYA+N + +E L +F M+
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+P+ + + + ++ G V + ++ +D V +LI++ KCGN+
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD-KTIPVSNSLINLYLKCGNV 245
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+A LF++ + + ++ SMI G + +G +A+G+F M + ++F ++ C
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
++ + + + ++ KY + ++ S+ + +A L K + + +
Sbjct: 306 ANLKELRFTEQLHCSV-VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 285 WGALL 289
W A++
Sbjct: 365 WTAMI 369
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 49 FTVMIDGYAKV-----GDIASARA-----LFDKAPKRDAFLWSVLISGYAQNGLPNEALK 98
F + +G A+V G ++S+R LFDK+P RD + L+ G++++G EA +
Sbjct: 20 FRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKR 79
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
+F + + ++ D I S++ + + + + + C + + V +L+D
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTSLVDTY 138
Query: 159 AKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
K N K+F+EM +R++ ++ ++I G + + ++ + LF +M NEG P++ F
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 219 VILTACSHGRLVEEG 233
L G L EEG
Sbjct: 199 AAL-----GVLAEEG 208
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 204/398 (51%), Gaps = 45/398 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLIN-----ARKVFDDMPERDV----VSFTV-- 51
A ++F MP +N+ ++NAM+ G ++ ++ + A K+F DM R + +F+V
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 52 ---------------------------------MIDGYAKVGDIASARALFDKAPKRDAF 78
+I+ YA +G F K+D
Sbjct: 366 KACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIA 425
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I + QN A +F+ + +++P+EY + +MSAC+ L + + Y
Sbjct: 426 SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYA 485
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+S ID T V + I M AK GNM AN++F E+ D+ +Y +MI L+ HG A +A
Sbjct: 486 IKSGID-AFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ +F M G+ P+ AF +L AC HG LV +G YF+ MK+ Y + P+ +H+ C+VD
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LL R+G+L +A L+ S + H W ALL +C+ Y + +G+ VA RL ELEPE S
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 664
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLL +IY + V+ M++RG++K P SWI
Sbjct: 665 YVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 702
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 48/280 (17%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------- 43
A+++F +MPERN+ S+N+++ G + G A ++F + E
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 44 --------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ V V+ID Y+K G + A +LFD+ +RD W+ L
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS---QVGNLDLAKWVDCYLSQ 140
ISGY + G E L + M + Y + S++ AC G ++ + CY ++
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK 280
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGL-----SIHGYA 195
++ V AL+DM AK G++ A KLF MP +++ +Y +MI G +
Sbjct: 281 LGMEFDIV-VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+A LF M GL P + F+V+L ACS + +E G+
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 379
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 140/288 (48%), Gaps = 23/288 (7%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y K ++ AR LFD+ P+R+ ++ LISGY Q G +A+++F N+K D++
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+ C + +LDL + + + + + Q ++ LIDM +KCG +D+A LF+
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLS-QQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS---HGRLVEE 232
+RD S+ S+I G G AE+ + L KM +GL A +L AC + +E+
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 233 GKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
G +K M ++D+ +++G LKEA +L MP + + A++
Sbjct: 271 GMA-IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMIS-- 326
Query: 293 KFYGEVELGEIV------ANRLF------ELEPENSSPYVLLSSIYAA 328
G +++ EI A +LF LEP S+ V+L + AA
Sbjct: 327 ---GFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 184/308 (59%), Gaps = 7/308 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++D Y K GD+++A+ FD P D W+ +ISG +NG A +F M LM V PD
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH---VVAALIDMNAKCGNMDRAN 168
E+ + +L A S + L+ + + +++ + T+ V +L+DM AKCG++D A
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHA----NALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
LF+ + ++ ++ +M+ GL+ HG ++ + LF +M + G+ PD F +L+ACSH
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
LV E + +M Y + P EHY+C+ D L R+G +K+A L++SM +E+ AS + L
Sbjct: 734 LVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 289 LGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
L AC+ G+ E G+ VA +L ELEP +SS YVLLS++YAAA +W ++ + MK ++
Sbjct: 794 LAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVK 853
Query: 349 KLPGCSWI 356
K PG SWI
Sbjct: 854 KDPGFSWI 861
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 44/335 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF----------------------DD 40
A+ VF M ER+L SWN+++ G+ + G + A +F
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 41 MPE------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+PE D T +ID Y++ + A LF++ D W+
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNA 487
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+++GY Q+ ++ LK+F M + D++ + ++ C + ++ K V Y +S
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
D+ V + ++DM KCG+M A F+ +P D ++ +MI G +G E+A +F
Sbjct: 548 YDL-DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
++M G++PD + A S +E+G+ K + P +VD+ ++
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ-IHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
G + +AY L K + + + +AW A+L +GE
Sbjct: 666 CGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 13/253 (5%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I+ Y K+ AR +FD +RD W+ +I+G AQNGL EA+ +F + +KPD
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 112 EYIMVSLMSACSQV-GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+Y M S++ A S + L L+K V + + + ++ + V ALID ++ M A L
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN-NVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
FE DL ++ +M+ G + + + LF M +G D+ + C +
Sbjct: 475 FER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAI 533
Query: 231 EEGKH-YFETMKSKYSM---VPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
+GK + +KS Y + V S ++D+ + G + A S+PV AW
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSG-----ILDMYVKCGDMSAAQFAFDSIPVPDDV-AWT 587
Query: 287 ALLGACKFYGEVE 299
++ C GE E
Sbjct: 588 TMISGCIENGEEE 600
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 16/297 (5%)
Query: 4 KRVFVQMPERNLTSWNAMVGGLVKGG------DLINARKVFDDMPERDVVSFTVMIDGY- 56
K +F +MP R++ WN M+ ++ G DL +A P + I G
Sbjct: 200 KVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDD 259
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV 116
+ G + S D + + + +S Y +G + LK F M +V+ D+ +
Sbjct: 260 SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFI 319
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
+++ +V +L L + V C + +D+ T V +LI+M K A +F+ M +
Sbjct: 320 LMLATAVKVDSLALGQQVHCMALKLGLDLMLT-VSNSLINMYCKLRKFGFARTVFDNMSE 378
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS---HGRLVEEG 233
RDL S+ S+I G++ +G +AV LF ++L GL PD T +L A S G + +
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQ 438
Query: 234 KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
H K + V ++D SR+ +KEA L + + AW A++
Sbjct: 439 VHVHAI---KINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD--LVAWNAMMA 490
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 19 NAMVGGLVKGGDLINARKV-FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
NA+ + G +AR + F++ PER +++ +I Y+K G + AR +FDK P RD
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLIN--NLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 78 FLWSVLISGYAQNG---LPN--EALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
W+ +++ YAQ+ + N +A +F+ + V + ++ C G + ++
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
Y + +D G V AL+++ K G + LFEEMP RD+ + M++
Sbjct: 166 SFHGYACKIGLD-GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
G+ E+A+ L + + GL P+ ++
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 52/265 (19%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV--------- 51
A+ F +P + +W M+ G ++ G+ A VF M V+ FT+
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 52 ----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
++D YAK G I A LF + + W+ +
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
+ G AQ+G E L++F+ M+ + +KPD+ + ++SACS G + A Y S+
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA-----YKHMRSM 745
Query: 144 --DIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS-YCSMIQGLSIHGYAEQ 197
D G + + L D + G + +A L E M S Y +++ + G E
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILT 222
+ K+L L P +++ V+L+
Sbjct: 806 GKRVATKLLE--LEPLDSSAYVLLS 828
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 205/398 (51%), Gaps = 48/398 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSF-------- 49
A+ VF M ++ SWN+++ G ++ GDL+ A K+F M + D +++
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 50 ---------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ID YAK G++ + +F D W+
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNT 479
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL---- 138
+IS + G L++ M V PD + + C+ + L K + C L
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG 539
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+S + IG ALI+M +KCG ++ ++++FE M +RD+ ++ MI ++G E+A
Sbjct: 540 YESELQIGN-----ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKA 594
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ F M G++PD+ F I+ ACSH LV+EG FE MK+ Y + P EHYAC+VD
Sbjct: 595 LETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LLSRS ++ +A E +++MP++ AS W ++L AC+ G++E E V+ R+ EL P++
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGY 714
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+L S+ YAA +W VS ++ +K++ + K PG SWI
Sbjct: 715 SILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 114/187 (60%), Gaps = 8/187 (4%)
Query: 52 MIDGYAKVGDIASARALFDK-APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
+ID Y+ + AS+ ++F + +P ++ +LW+ +I +++NGL EAL+ + + V P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRA 167
D+Y S++ AC+ + + ++ V + +D+G V AL+DM ++ G + RA
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLV----YEQILDMGFESDLFVGNALVDMYSRMGLLTRA 160
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
++F+EMP RDL S+ S+I G S HGY E+A+ +++++ N ++PD+ + +L A +
Sbjct: 161 RQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 228 RLVEEGK 234
+V++G+
Sbjct: 221 LVVKQGQ 227
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 161/372 (43%), Gaps = 46/372 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKG--------------------------------- 28
+A+RVF +M R+ S+N M+ G +K
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGH 319
Query: 29 -GDLINARKVFDDMPERDVV----SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
DL A+ +++ M + V ++ID YAK GD+ +AR +F+ +D W+ +
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISGY Q+G EA+K+F+ M +M + D + L+S +++ +L K + +S I
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
I + V ALIDM AKCG + + K+F M D ++ ++I G + +
Sbjct: 440 CIDLS-VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M ++PD A F V L C+ GK + ++ + ++++ S+
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKC 557
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP--YVL 321
G L+ + + + M W ++ A YGE GE ++E P V
Sbjct: 558 GCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVF 613
Query: 322 LSSIYAAADQWL 333
++ IYA + L
Sbjct: 614 IAIIYACSHSGL 625
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 148/305 (48%), Gaps = 20/305 (6%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
GDL+ ++ D E D+ ++D Y+++G + AR +FD+ P RD W+ LISGY+
Sbjct: 125 GDLV-YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY--LSQSSIDIG 146
+G EAL+I+ ++ + PD + + S++ A GNL + K + S
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA---FGNLLVVKQGQGLHGFALKSGVNS 240
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
V L+ M K A ++F+EM RD SY +MI G E++V +F + L
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL 300
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
++ PD + +L AC H R + K+ + M K V ++D+ ++ G +
Sbjct: 301 DQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYML-KAGFVLESTVRNILIDVYAKCGDM 358
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIV-ANRLFEL-----EPENSSPYV 320
A ++ SM + S W +++ G ++ G+++ A +LF++ E + Y+
Sbjct: 359 ITARDVFNSMECKDTVS-WNSIIS-----GYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
Query: 321 LLSSI 325
+L S+
Sbjct: 413 MLISV 417
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 185/312 (59%), Gaps = 1/312 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D V + V++ Y + G AR +FD +R+ W+ LIS ++ +E +F+ M+
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+ + +++ ACS+V L K + + +S + ++ +L+DM KCG +
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK-EKPDVPLLNSLMDMYGKCGEV 388
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ + ++F+ M +DL S+ M+ +I+G E+ + LF M+ G+ PD F +L+ C
Sbjct: 389 EYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
S L E G FE MK+++ + P+ EHYAC+VD+L R+G++KEA +++++MP + AS
Sbjct: 449 SDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI 508
Query: 285 WGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
WG+LL +C+ +G V +GEI A LF LEP N YV++S+IYA A W +V ++ MK+
Sbjct: 509 WGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQ 568
Query: 345 RGLRKLPGCSWI 356
RG++K GCSW+
Sbjct: 569 RGVKKEAGCSWV 580
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 65 ARALFDKAPKRDAF---LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
AR +FD +W+ + GY++NG P +AL ++ M ++P + + + A
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C + +L + + + + + + Q V L+ + + G D A K+F+ M +R++ +
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQV-VYNVLLKLYMESGLFDDARKVFDGMSERNVVT 304
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETM 240
+ S+I LS + LF KM E + A T IL ACS + GK + + +
Sbjct: 305 WNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQIL 364
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
KSK P ++D+ + G+++ + + M + AS W +L G +E
Sbjct: 365 KSKEK--PDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS-WNIMLNCYAINGNIE 420
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 220 bits (561), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 210/398 (52%), Gaps = 44/398 (11%)
Query: 2 NAKRVFVQMP-ERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFT------ 50
+AKRVF + ++L SWN+M+ G K +A ++F M E D+ ++T
Sbjct: 201 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 260
Query: 51 ---------------VMIDGYAKV----------------GDIASARALFDKAPKRDAFL 79
V+ G +V G + A +LF+ +D
Sbjct: 261 SGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS 320
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ +I+G+AQ GL +A+K F + +K D+Y +L+ +CS + L L + + +
Sbjct: 321 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 380
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQA 198
+S + V+++LI M +KCG ++ A K F+++ K ++ +MI G + HG + +
Sbjct: 381 KSGF-VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVS 439
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ LF++M N+ + D+ FT ILTACSH L++EG M+ Y + P EHYA VD
Sbjct: 440 LDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVD 499
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
LL R+G + +A EL++SMP+ LG C+ GE+E+ VAN L E+EPE+
Sbjct: 500 LLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFT 559
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YV LS +Y+ +W + + VK MKERG++K+PG SWI
Sbjct: 560 YVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 597
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 162/372 (43%), Gaps = 49/372 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINA-------------------------- 34
++A F ++ E N SWNA++ G V+ D+ A
Sbjct: 98 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL 157
Query: 35 --------------RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK-APKRDAFL 79
KV + ++ MI YA G ++ A+ +FD +D
Sbjct: 158 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 217
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ +I+G++++ L A ++F M+ V+ D Y L+SACS + K + +
Sbjct: 218 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 277
Query: 140 QSSIDIGQTHVVAALIDMNAK--CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ ++ T ALI M + G M+ A LFE + +DL S+ S+I G + G +E
Sbjct: 278 KKGLE-QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 336
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
AV F+ + + + D+ AF+ +L +CS ++ G+ + +K V + + ++
Sbjct: 337 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ-IHALATKSGFVSNEFVISSLI 395
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
+ S+ G ++ A + + + + AW A++ Y + LG++ + ++ +N
Sbjct: 396 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILG---YAQHGLGQVSLDLFSQMCNQNVK 452
Query: 318 -PYVLLSSIYAA 328
+V ++I A
Sbjct: 453 LDHVTFTAILTA 464
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 151/378 (39%), Gaps = 83/378 (21%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----------------------- 42
+F +MP+R+ SWN M+ G G L +A +F M
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 43 ----------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
E +V + ++D YAK + A F + + ++ W+ LI+G
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 121
Query: 87 YAQNGLPNEALKIFQGMEL-MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
+ Q A + ME+ V D L++ +L K V + + +
Sbjct: 122 FVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKV----LKL 177
Query: 146 GQTH---VVAALIDMNAKCGNMDRANKLFEEM-PKRDLFSYCSMIQGLSIHGYAEQAVGL 201
G H + A+I A CG++ A ++F+ + +DL S+ SMI G S H E A L
Sbjct: 178 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 237
Query: 202 FNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG------------KHYFE 238
F +M + D +T +L+ACS HG ++++G Y +
Sbjct: 238 FIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 297
Query: 239 ----TMKSKYSMVPSPE-----HYACMVDLLSRSGQLKEA---YELLKSMPVESHASAWG 286
TM+ S+ S + + ++ ++ G ++A + L+S ++ A+
Sbjct: 298 FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFS 357
Query: 287 ALLGACKFYGEVELGEIV 304
ALL +C ++LG+ +
Sbjct: 358 ALLRSCSDLATLQLGQQI 375
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 193/334 (57%), Gaps = 5/334 (1%)
Query: 23 GGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
GLV G I+ + D+ + V + +ID Y+K G + SA +F++ R W+
Sbjct: 418 AGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNS 475
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++ G++QNG EA+ +F M ++ +E ++++ ACS +G+L+ KWV L S
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG 535
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ ALIDM AKCG+++ A +F M R + S+ SMI +HG A+ F
Sbjct: 536 LK--DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTF 593
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
N+M+ G P+ F +L+AC H VEEGK+YF MKS + + P+ EH+AC +DLLSR
Sbjct: 594 NQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSR 652
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
SG LKEAY +K MP + AS WG+L+ C+ + ++++ + + N L ++ +++ Y LL
Sbjct: 653 SGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLL 712
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S+IYA +W + +++ MK L+K+PG S I
Sbjct: 713 SNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 168/320 (52%), Gaps = 26/320 (8%)
Query: 22 VGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
VGG V G ++ + D V T ++ Y + G+++ A +FD P RD WS
Sbjct: 119 VGGKVHG-------RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWS 171
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L+S +NG +AL++F+ M V+PD M+S++ C+++G L +A+ V +++
Sbjct: 172 TLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRK 231
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D+ +T + +L+ M +KCG++ + ++FE++ K++ S+ +MI + ++E+A+
Sbjct: 232 MFDLDET-LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYA-CMVD 258
F++M+ G+ P+ +L++C L+ EGK H F + + P+ E + +V+
Sbjct: 291 FSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR---ELDPNYESLSLALVE 347
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV--ELG---EIVANRLFELEP 313
L + G+L + +L+ + + + AW +L+ G V LG ++V R ++P
Sbjct: 348 LYAECGKLSDCETVLRVVS-DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR---IKP 403
Query: 314 ENSSPYVLLSSIYAAADQWL 333
+ + L SSI A + L
Sbjct: 404 D---AFTLASSISACENAGL 420
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 154/336 (45%), Gaps = 52/336 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF----DDMPERDVVSFTVMIDG-- 55
+A++VF MP R+L +W+ +V ++ G+++ A ++F DD E D V+ +++G
Sbjct: 154 DAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCA 213
Query: 56 ---------------------------------YAKVGDIASARALFDKAPKRDAFLWSV 82
Y+K GD+ S+ +F+K K++A W+
Sbjct: 214 ELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTA 273
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+IS Y + +AL+ F M ++P+ + S++S+C +G + K V + +
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D + AL+++ A+CG + + + R++ ++ S+I + G QA+GLF
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLF 393
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKYSMVPSPEHYACMVD 258
+M+ + + PD ++AC + LV GK H T S + S ++D
Sbjct: 394 RQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS------LID 447
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
+ S+SG + A + + S W ++L C F
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRS-VVTWNSML--CGF 480
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 146/317 (46%), Gaps = 48/317 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------ 43
+++R+F ++ ++N SW AM+ +G A + F +M +
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 44 --------RDVVSFTV--------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ V F V +++ YA+ G ++ + R+ W+
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LIS YA G+ +AL +F+ M +KPD + + S +SAC G + L K + ++ ++
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D+ V +LIDM +K G++D A+ +F ++ R + ++ SM+ G S +G + +A+ L
Sbjct: 435 --DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISL 492
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDL 259
F+ M + L + F ++ ACS +E+GK H+ + + ++D+
Sbjct: 493 FDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD----TALIDM 548
Query: 260 LSRSGQLKEAYELLKSM 276
++ G L A + ++M
Sbjct: 549 YAKCGDLNAAETVFRAM 565
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
D+A VF Q+ R++ +WN+M+ G + G+ + A +FD M
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 44 ---------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+D+ + T +ID YAK GD+ +A +F R WS
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSS 575
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+ Y +G A+ F M KP+E + ++++SAC G+++ K+ +
Sbjct: 576 MINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFG 635
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ H A ID+ ++ G++ A + +EMP D + S++ G IH Q + +
Sbjct: 636 VSPNSEH-FACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH----QKMDI 690
Query: 202 FNKMLNE--GLIPDNAAFTVILT 222
+ N+ ++ D+ + +L+
Sbjct: 691 IKAIKNDLSDIVTDDTGYYTLLS 713
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 149/342 (43%), Gaps = 39/342 (11%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
RD + T +I+ YA +G S+R +F+ P D+F++ VLI L + A+ ++
Sbjct: 31 RRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHR 90
Query: 103 MELMNVKPDEYIMVSLMSACS-QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
+ + +++ S++ AC+ +L + V + + +D + +L+ M +
Sbjct: 91 LVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVD-DDAVIETSLLCMYGQT 149
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
GN+ A K+F+ MP RDL ++ +++ +G +A+ +F M+++G+ PD ++
Sbjct: 150 GNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVV 209
Query: 222 TACS-----------HGRLV-------EEGKHYFETMKSKYSMVPSPEH----------- 252
C+ HG++ E + TM SK + S E
Sbjct: 210 EGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAV 269
Query: 253 -YACMVDLLSR----SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR 307
+ M+ +R L+ E++KS +E + ++L +C G + G+ V
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKS-GIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 308 LF--ELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
EL+P S + L +YA + D V + +R +
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 183/315 (58%), Gaps = 7/315 (2%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D + T ++ Y+ G + A +FD+ P RD W+V+I ++ GL N+AL +++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI---GQTHVVAALIDMNAKC 161
V D Y +V+L+S+C+ V L++ L + + DI V ALIDM AKC
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMG----VMLHRIACDIRCESCVFVSNALIDMYAKC 256
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G+++ A +F M KRD+ ++ SMI G +HG+ +A+ F KM+ G+ P+ F +L
Sbjct: 257 GSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
CSH LV+EG +FE M S++ + P+ +HY CMVDL R+GQL+ + E++ +
Sbjct: 317 LGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHED 376
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNK 341
W LLG+CK + +ELGE+ +L +LE N+ YVL++SIY+AA+ + ++
Sbjct: 377 PVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKL 436
Query: 342 MKERGLRKLPGCSWI 356
++ L+ +PG SWI
Sbjct: 437 IRSHDLQTVPGWSWI 451
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 203/391 (51%), Gaps = 42/391 (10%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV---SFTV----------- 51
VF MP RN+ SWN ++G + G + +F M V FT+
Sbjct: 70 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 129
Query: 52 --------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
++ Y +G + AR LFD P RD+ L++ +
Sbjct: 130 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 189
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GY Q G L +F+ M D +MVSL+ AC Q+G L K V + + +
Sbjct: 190 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 249
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
G ++ A+ DM KC +D A+ +F M +RD+ S+ S+I G + G + LF++M
Sbjct: 250 G-LNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 308
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
L EG+ P+ F +L+AC+HG LVE+ YF M+ +Y++VP +HYA + D +SR+G
Sbjct: 309 LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPELKHYASVADCMSRAGL 367
Query: 266 LKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSI 325
L+EA + L+ MPV+ + GA+L CK YG VE+GE VA L +L+P +S YV L+ +
Sbjct: 368 LEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGL 427
Query: 326 YAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
Y+AA ++ + ++ MKE+ + K+PGCS I
Sbjct: 428 YSAAGRFDEAESLRQWMKEKQISKVPGCSSI 458
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 45 DVVSFTVMIDGYAKVGDI-ASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
+VV + ++ Y+K+ + ++ ++F P R+ F W+++I ++++G ++++ +F M
Sbjct: 46 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 105
Query: 104 ELMN-VKPDEYIMVSLMSACS---QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA 159
+ V+PD++ + ++ ACS + + DL + L SS V +AL+ M
Sbjct: 106 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSS----SLFVSSALVIMYV 161
Query: 160 KCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
G + A KLF++MP RD Y +M G G A + +F +M G D+
Sbjct: 162 DMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 221
Query: 220 ILTACSHGRLVEEGK 234
+L AC ++ GK
Sbjct: 222 LLMACGQLGALKHGK 236
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMIDGY 56
D A VFV M R++ SW++++ G GD++ + K+FD+M E + V+F ++
Sbjct: 268 DYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSAC 327
Query: 57 AKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
A G + + F + + ++ + ++ GL EA K +E M VKPDE
Sbjct: 328 AHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKF---LEDMPVKPDE 384
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
+M +++S C GN+++ + V L Q +V A + + G D A L +
Sbjct: 385 AVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLA--GLYSAAGRFDEAESLRQ 442
Query: 173 EMPKRDL 179
M ++ +
Sbjct: 443 WMKEKQI 449
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 192/324 (59%), Gaps = 13/324 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV +I Y G + AR +FD+ P+R W+ +I + G + AL++F+ M+
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL-SQSSIDIGQTHVVA-ALIDMNAKCG 162
+ +PD Y M S++SAC+ +G+L L W +L + +D+ +V +LI+M KCG
Sbjct: 245 -RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN--EGLIPDNAAFTVI 220
++ A ++F+ M KRDL S+ +MI G + HG AE+A+ F++M++ E + P++ F +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
L AC+H V +G+ YF+ M Y + P+ EHY C+VDL++R+G + EA +++ SMP++
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 281 HASAWGALLGA-CKFYGEVELGEIVANRLFELEPENSSP-------YVLLSSIYAAADQW 332
A W +LL A CK VEL E +A + + +N S YVLLS +YA+A +W
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRW 483
Query: 333 LDVSHVKNKMKERGLRKLPGCSWI 356
DV V+ M E G+RK PGCS I
Sbjct: 484 NDVGIVRKLMSEHGIRKEPGCSSI 507
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 8/266 (3%)
Query: 57 AKVGDIASARALFDKAPKRDAFLWSVLISGYAQN-GLPNEALKIFQGM-ELMNVKPDEYI 114
+ D+ A +FD +F+W+ LI A + EA +++ M E PD++
Sbjct: 94 SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHT 153
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
++ AC+ + K V C + + G +V LI + CG +D A K+F+EM
Sbjct: 154 FPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
P+R L S+ SMI L G + A+ LF +M PD +L+AC+ + G
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGT 271
Query: 235 --HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
H F K + ++++ + G L+ A ++ + M AS W A++
Sbjct: 272 WAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLAS-WNAMILGF 330
Query: 293 KFYGEVELGEIVANRLFELEPENSSP 318
+G E +R+ + + EN P
Sbjct: 331 ATHGRAEEAMNFFDRMVD-KRENVRP 355
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
D A++VF +MPER+L SWN+M+ LV+ G+ +A ++F +M
Sbjct: 203 DLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACA 262
Query: 45 -------------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL 79
DV+ +I+ Y K G + A +F KRD
Sbjct: 263 GLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLAS 322
Query: 80 WSVLISGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAK-WVDC 136
W+ +I G+A +G EA+ F M + NV+P+ V L+ AC+ G ++ + + D
Sbjct: 323 WNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDM 382
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
+ I+ H ++D+ A+ G + A + MP +
Sbjct: 383 MVRDYCIEPALEH-YGCIVDLIARAGYITEAIDMVMSMPMK 422
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 208/353 (58%), Gaps = 9/353 (2%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E L S NA++ K G + +A +F + + + S+ +I + G + A +LF +
Sbjct: 326 EEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSE 385
Query: 72 AP--------KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
K + W+ +I G G +++L+ F+ M+ V + + ++S C+
Sbjct: 386 LEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICA 445
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYC 183
++ L+L + + ++ ++S+ V AL++M AKCG + + +FE + +DL S+
Sbjct: 446 ELPALNLGREIHGHVIRTSMS-ENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWN 504
Query: 184 SMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
S+I+G +HG+AE+A+ +F++M++ G PD A +L+ACSH LVE+G+ F +M +
Sbjct: 505 SIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI 303
+ + P EHYAC+VDLL R G LKEA E++K+MP+E GALL +C+ + V++ E
Sbjct: 565 FGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEG 624
Query: 304 VANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+A++L LEPE + Y+LLS+IY+A +W + ++V+ K++ L+K+ G SWI
Sbjct: 625 IASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWI 677
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 32 INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPK---RDAFLWSVLISGYA 88
++A+ + D R +I YA++G + AR +F+ D LW+ ++
Sbjct: 75 VHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANV 134
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
+GL AL++++GM + D YI+ ++ AC +G L + + Q +
Sbjct: 135 SHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLK-ENL 193
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
HVV L+ + K G M A LF EMP R+ S+ MI+G S E AV +F M E
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE 253
Query: 209 GLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
PD +T +L+ S E+ YF M+
Sbjct: 254 EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%), Gaps = 9/238 (3%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFD- 70
+ NL N ++ K G + +A +F +MP R+ +S+ VMI G+++ D SA +F+
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 71 ---KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
+ K D W+ ++S ++Q G + LK F M + + S C+++
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQ 187
L +A+ V Y+ + + ALI + K G + A LF ++ + + S+ S+I
Sbjct: 310 LSIAEKVHGYVIKGGFE-EYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLIT 368
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLIPDNAA----FTVILTACSHGRLVEEGKHYFETMK 241
G ++A+ LF+++ + + A +T ++ C+ ++ YF M+
Sbjct: 369 SFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 190/338 (56%), Gaps = 3/338 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
+++V K G L +A+ VFD + ++ +S+T M+ GYAK G A LF P ++ +
Sbjct: 144 SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY 203
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKP-DEYIMVSLMSACSQVGNLDLAKWVDCY 137
W+ LISG+ Q+G EA +F M V D ++ S++ AC+ + + V
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ D + ALIDM AKC ++ A +F M RD+ S+ S+I G++ HG AE+
Sbjct: 264 VIALGFD-SCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEK 322
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
A+ L++ M++ G+ P+ F ++ ACSH VE+G+ F++M Y + PS +HY C++
Sbjct: 323 ALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLL 382
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF-ELEPENS 316
DLL RSG L EA L+ +MP W ALL ACK G ++G +A+ L + ++
Sbjct: 383 DLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDP 442
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
S Y+LLS+IYA+A W VS + K+ E +RK PG S
Sbjct: 443 STYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 41/261 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
+ A +F +P +NL SW A++ G V+ G + A VF +M
Sbjct: 188 EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGA 247
Query: 44 ----------RDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLW 80
R V + +ID YAK D+ +A+ +F + RD W
Sbjct: 248 CANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSW 307
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ LI G AQ+G +AL ++ M VKP+E V L+ ACS VG ++ + + +++
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK 367
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAV 199
L+D+ + G +D A L MP D ++ +++ G + +
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 200 GLFNKMLNEGLIPDNAAFTVI 220
+ + +++ + D + + ++
Sbjct: 428 RIADHLVSSFKLKDPSTYILL 448
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEAL-KIFQGMELMNVK 109
+++ Y K G + A +FD+ P RD W+ +++ Q L + L ++
Sbjct: 43 TLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLR 102
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD+++ +L+ AC+ +G++D + V C+ S + V ++L+DM AKCG ++ A
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNSAKA 161
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+F+ + ++ S+ +M+ G + G E+A+ LF
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 17/232 (7%)
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD 178
+ C++ L AK + ++ + I + + L+++ KCG A ++F+EMP RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGI-VQCCPLANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 179 LFSYCSMIQGLSIHGYAEQAV-GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--- 234
++ S++ L+ + + + + + GL PD+ F+ ++ AC++ ++ G+
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 235 -HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
H+ + + +V S +VD+ ++ G L A + S+ V++ S W A++
Sbjct: 129 CHFIVSEYANDEVVKSS-----LVDMYAKCGLLNSAKAVFDSIRVKNTIS-WTAMVSGYA 182
Query: 294 FYGEVELGEIVANRLFELEP-ENSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
G E A LF + P +N + L S + + + L+ V +M+
Sbjct: 183 KSGRKE----EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRR 230
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 202/394 (51%), Gaps = 41/394 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------------------- 42
AKRVF QM + + ++ G + G +A K+F D+
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 43 -------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
E +V T ++D Y K SA F + + + WS +
Sbjct: 298 LEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 357
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKP-DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
ISGY Q EA+K F+ + N + + S+ ACS + + ++ V + S
Sbjct: 358 ISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRS 417
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ IG + +ALI M +KCG +D AN++FE M D+ ++ + I G + +G A +A+ LF
Sbjct: 418 L-IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
KM++ G+ P++ F +LTACSH LVE+GKH +TM KY++ P+ +HY CM+D+ +R
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
SG L EA + +K+MP E A +W L C + +ELGEI L +L+PE+++ YVL
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLP 596
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
++Y A +W + + + M ER L+K CSWI
Sbjct: 597 FNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 8/262 (3%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T +++ Y K G + A+ +FD+ + + L+ GY Q G +ALK+F + V+
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
D ++ ++ AC+ + L+L K + +++ ++ + V L+D KC + + A +
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE-SEVSVGTPLVDFYIKCSSFESACR 341
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL-IPDNAAFTVILTACSHGR 228
F+E+ + + S+ ++I G E+AV F + ++ I ++ +T I ACS
Sbjct: 342 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLA 401
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
G K S++ S + ++ + S+ G L +A E+ +SM AW A
Sbjct: 402 DCNIGGQ-VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAF 459
Query: 289 LGACKFYGEVELGEIVANRLFE 310
+ +YG A RLFE
Sbjct: 460 ISGHAYYGNAS----EALRLFE 477
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y + + A LFD+ + +A + +IS YA+ G+ ++A+ +F GM KP +
Sbjct: 128 YCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY 187
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+L+ + LD + + ++ ++ + T + +++M KCG + A ++F++M
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGL-CSNTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+ + ++ G + G A A+ LF ++ EG+ D+ F+V+L AC+ + GK
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQ 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 43/234 (18%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV---SFT------- 50
++A R F ++ E N SW+A++ G + A K F + ++ SFT
Sbjct: 337 ESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQA 396
Query: 51 ------------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLW 80
+I Y+K G + A +F+ D W
Sbjct: 397 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAW 456
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK-WVDCYLS 139
+ ISG+A G +EAL++F+ M +KP+ +++++ACS G ++ K +D L
Sbjct: 457 TAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLR 516
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIH 192
+ ++ H +ID+ A+ G +D A K + MP + D S+ + G H
Sbjct: 517 KYNVAPTIDH-YDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA 153
NEA + Q M+ V Y L AC ++ +L + + + + I+ +
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNC 123
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
++ M +C +++ A+KLF+EM + + S +MI + G ++AVGLF+ ML G P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 214 NAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
++ +T +L + + R ++ G+ + +++ S E +V++ + G L A +
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIE--TGIVNMYVKCGWLVGAKRV 241
Query: 273 LKSMPVESHASAWGALLG 290
M V+ + G ++G
Sbjct: 242 FDQMAVKKPVACTGLMVG 259
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 182/307 (59%), Gaps = 4/307 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
++D Y + G ++ A+ F + +D W+ LIS ++ +EAL +FQ E P+
Sbjct: 254 ILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPN 312
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
Y SL++AC+ + L+ + + + + + + ALIDM AKCGN+ + ++F
Sbjct: 313 CYTFTSLVAACANIAALNCGQQLHGRIFRRGFN-KNVELANALIDMYAKCGNIPDSQRVF 371
Query: 172 EEM-PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
E+ +R+L S+ SM+ G HGY +AV LF+KM++ G+ PD F +L+AC H LV
Sbjct: 372 GEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLV 431
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
E+G YF M+S+Y + P + Y C+VDLL R+G++ EAYEL++ MP + S WGA+LG
Sbjct: 432 EKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILG 491
Query: 291 ACKFYGEVEL-GEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRK 349
ACK + L + A ++ EL+P+ YV+LS IYAA +W+D + V+ M+ G +K
Sbjct: 492 ACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKK 551
Query: 350 LPGCSWI 356
G SWI
Sbjct: 552 EAGMSWI 558
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 3/236 (1%)
Query: 42 PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
P++ + T +I Y + G + AR+LFD+ P RD W+ +I+GYA + A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
M P+E+ + S++ +C + L V + + ++ G +V A+++M A C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGME-GSLYVDNAMMNMYATC 159
Query: 162 G-NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
M+ A +F ++ ++ ++ ++I G + G + ++ +ML E T+
Sbjct: 160 SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ A + V GK ++ + P + ++DL R G L EA M
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNS-ILDLYCRCGYLSEAKHYFHEM 274
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/375 (19%), Positives = 148/375 (39%), Gaps = 76/375 (20%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
+ A+ +F +MP+R++ +W AM+ G A + F +M ++
Sbjct: 62 EEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSC 121
Query: 45 ---DVVSFTVMIDGYA-KVG--------------------DIASARALFDKAPKRDAFLW 80
V+++ ++ G K+G + +A +F ++ W
Sbjct: 122 RNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTW 181
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ LI+G+ G LK+++ M L N + Y + + A + + ++ K + + +
Sbjct: 182 TTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIK 241
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
V+ +++D+ +CG + A F EM +DL ++ ++I L + +A+
Sbjct: 242 RGFQ-SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALL 299
Query: 201 LFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEG-------KHYFETMKS 242
+F + ++G +P+ FT ++ AC+ HGR+ G + M +
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYA 359
Query: 243 KYSMVPSPEH-------------YACMVDLLSRSGQLKEAYELLKSM---PVESHASAWG 286
K +P + + M+ G EA EL M + +
Sbjct: 360 KCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFM 419
Query: 287 ALLGACKFYGEVELG 301
A+L AC+ G VE G
Sbjct: 420 AVLSACRHAGLVEKG 434
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-DVVSFTVMIDGYAKVGDIA 63
R+F + +N+ NA++ K G++ ++++VF ++ +R ++VS+T M+ GY G A
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 64 SARALFDK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL-MNVKPDEYI---M 115
A LFDK + D ++ ++S GL + LK F ME + PD I +
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCV 457
Query: 116 VSLMSACSQVG 126
V L+ ++G
Sbjct: 458 VDLLGRAGKIG 468
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 205/396 (51%), Gaps = 41/396 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER---------------- 44
++A+RVF Q+ + SWN ++ GL G A VF M
Sbjct: 322 NSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQ 381
Query: 45 -----------------------DVVSFTVMIDGYAKVGDIASARALF-DKAPKRDAFLW 80
D+ ++ Y D+ LF D D+ W
Sbjct: 382 TKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSW 441
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +++ Q+ P E L++F+ M + +PD M +L+ C ++ +L L V CY +
Sbjct: 442 NTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLK 501
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ + Q + LIDM AKCG++ +A ++F+ M RD+ S+ ++I G + G+ E+A+
Sbjct: 502 TGLAPEQ-FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF +M + G+ P++ F +LTACSH LVEEG + TM++++ + P+ EH +C+VDLL
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
+R+G+L EA + M +E W LL ACK G V L + A + +++P NS+ +V
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LL S++A++ W + + +++ MK+ ++K+PG SWI
Sbjct: 681 LLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWI 716
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 42/331 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV-------------- 47
+A+ VF MPERNL S+ +++ G + G A +++ M + D+V
Sbjct: 120 DAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179
Query: 48 -------------------------SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ +I Y + ++ A +F P +D WS
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239
Query: 83 LISGYAQNGLPNEALKIFQGMELMNV-KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+G++Q G EAL + M V P+EYI S + ACS + D + +S
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ G +L DM A+CG ++ A ++F+++ + D S+ +I GL+ +GYA++AV +
Sbjct: 300 EL-AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSV 358
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F++M + G IPD + +L A + + +G + K+ + ++ + +
Sbjct: 359 FSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ-IHSYIIKWGFLADLTVCNSLLTMYT 417
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGAC 292
L + L + + + +W +L AC
Sbjct: 418 FCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 113/218 (51%), Gaps = 10/218 (4%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVM----IDGYAKVGDIASARALFD 70
L ++ +++ L RK+ D + + T++ + Y K G + AR +FD
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 71 KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
P+R+ ++ +I+GY+QNG EA++++ M ++ PD++ S++ AC+ ++ L
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 131 AKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
K + + + +H++A ALI M + M A+++F +P +DL S+ S+I G
Sbjct: 187 GKQLHAQVIKLE---SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAG 243
Query: 189 LSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTACS 225
S G+ +A+ +ML+ G+ P+ F L ACS
Sbjct: 244 FSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 84 ISGYAQNGLPNEALKIF---QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
I+ ++ EAL+ F Q ++ YI SL+ ACS +L + + ++
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI--SLICACSSSRSLAQGRKIHDHILN 95
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S+ T + ++ M KCG++ A ++F+ MP+R+L SY S+I G S +G +A+
Sbjct: 96 SNCKY-DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA---CMV 257
L+ KML E L+PD AF I+ AC+ V GK + ++ + S H ++
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ----LHAQVIKLESSSHLIAQNALI 210
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ R Q+ +A + +P++ S W +++
Sbjct: 211 AMYVRFNQMSDASRVFYGIPMKDLIS-WSSIIAG 243
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 206/383 (53%), Gaps = 37/383 (9%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-----DVVSF-------- 49
A+R+F M +RN+ +WN M+G + G + +A F M E+ DV++
Sbjct: 286 AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345
Query: 50 -----------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
T +ID Y + G + SA +FD+ +++ W+ +I+
Sbjct: 346 ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAA 405
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Y QNG AL++FQ + ++ PD + S++ A ++ +L + + Y+ +S
Sbjct: 406 YVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY-WS 464
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
T ++ +L+ M A CG+++ A K F + +D+ S+ S+I ++HG+ +V LF++M+
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
+ P+ + F +L ACS +V+EG YFE+MK +Y + P EHY CM+DL+ R+G
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIY 326
A L+ MP A WG+LL A + + ++ + E A ++F++E +N+ YVLL ++Y
Sbjct: 585 SAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMY 644
Query: 327 AAADQWLDVSHVKNKMKERGLRK 349
A A +W DV+ +K M+ +G+ +
Sbjct: 645 AEAGRWEDVNRIKLLMESKGISR 667
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 178/375 (47%), Gaps = 68/375 (18%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PER----------- 44
+A++VF +MPER++ SWN+M+ G + GD ++ +F +M P+R
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 45 -----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
DV+ T ++D Y+K G+++ A +F+ +R+ W+
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 82 VLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
V+I YA+NG +A FQ M N ++PD ++L+ A + + + + Y +
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMR 358
Query: 141 SSIDIGQTHVV--AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
H+V ALIDM +CG + A +F+ M ++++ S+ S+I +G A
Sbjct: 359 RGF---LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSA 415
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKY---SMVPSPEHYA 254
+ LF ++ + L+PD+ IL A + + EG+ + +KS+Y +++ +
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS---- 471
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL-----GEIVANRLF 309
+V + + G L++A + + ++ S W +++ A +G + E++A+R
Sbjct: 472 -LVHMYAMCGDLEDARKCFNHILLKDVVS-WNSIIMAYAVHGFGRISVWLFSEMIASR-- 527
Query: 310 ELEPENSSPYVLLSS 324
+ P S+ LL++
Sbjct: 528 -VNPNKSTFASLLAA 541
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 48 SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
+ T + G+A + A LFD+ K DAFLW+V+I G+ GL EA++ + M
Sbjct: 66 ALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
VK D + ++ + + + +L+ K + + + + +V +LI + K G A
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF-VSDVYVCNSLISLYMKLGCAWDA 184
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
K+FEEMP+RD+ S+ SMI G G ++ LF +ML G PD + L ACSH
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 228 RLVEEGKH-YFETMKSKYS----MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
+ GK + ++S+ MV + ++D+ S+ G++ A + M ++ +
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTS-----ILDMYSKYGEVSYAERIFNGM-IQRNI 298
Query: 283 SAWGALLGACKFYGEV 298
AW ++G G V
Sbjct: 299 VAWNVMIGCYARNGRV 314
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 7/248 (2%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV +I Y K+G A +F++ P+RD W+ +ISGY G +L +F+ M
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML 223
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
KPD + +S + ACS V + + K + C+ +S I+ G V+ +++DM +K G +
Sbjct: 224 KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV 283
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTA 223
A ++F M +R++ ++ MI + +G A F KM + GL PD +L A
Sbjct: 284 SYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
+ + EG+ + +P ++D+ GQLK A + M E +
Sbjct: 344 SA----ILEGR-TIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVI 397
Query: 284 AWGALLGA 291
+W +++ A
Sbjct: 398 SWNSIIAA 405
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 217 bits (552), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 206/396 (52%), Gaps = 46/396 (11%)
Query: 2 NAKRVFVQMPERNLTSWNAMVG----------------------GLVKGGDLI------- 32
+A+RVF +MPE ++ W A++ GLV G
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 33 -NAR----------KVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
N R K+ + +VV + ++D Y K G + AR +F+ K+++ WS
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L+ GY QNG +A++IF+ ME + D Y +++ AC+ + + L K + +
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
G V +ALID+ K G +D A++++ +M R++ ++ +M+ L+ +G E+AV
Sbjct: 392 GC-FGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSF 450
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
FN M+ +G+ PD +F ILTAC H +V+EG++YF M Y + P EHY+CM+DLL
Sbjct: 451 FNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLG 510
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV-ELGEIVANRLFELEPENSSPYV 320
R+G +EA LL+ + AS WG LLG C + + E +A R+ ELEP+ YV
Sbjct: 511 RAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYV 570
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LLS++Y A + D +++ M RG+ K G SWI
Sbjct: 571 LLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 126/248 (50%), Gaps = 9/248 (3%)
Query: 56 YAKVG-DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
Y K+G + R +FD +DA W+ ++SGY +AL++F M + +E+
Sbjct: 106 YFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFT 165
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ--THVVAALIDMNAKCGNMDRANKLFE 172
+ S + ACS++G + L + + + + +A L +N + + A ++F+
Sbjct: 166 LSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD---ARRVFD 222
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACSHGRLVE 231
EMP+ D+ + +++ S + E+A+GLF M +GL+PD + F +LTAC + R ++
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+GK + + + + + ++D+ + G ++EA ++ M ++ S W ALLG
Sbjct: 283 QGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVS-WSALLGG 340
Query: 292 CKFYGEVE 299
GE E
Sbjct: 341 YCQNGEHE 348
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 200/388 (51%), Gaps = 42/388 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------------------- 42
A +F + E+++ SW+ ++ V+ G A VF+DM
Sbjct: 198 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 257
Query: 43 -------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
E +V T ++D Y K A A+F + P++D W L
Sbjct: 258 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVAL 317
Query: 84 ISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
ISG+ NG+ + +++ F M L N +PD +MV ++ +CS++G L+ AK Y+ +
Sbjct: 318 ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYG 377
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
D + A+L+++ ++CG++ A+K+F + +D + S+I G IHG +A+ F
Sbjct: 378 FD-SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETF 436
Query: 203 NKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
N M+ + P+ F IL+ACSH L+ EG F+ M + Y + P+ EHYA +VDLL
Sbjct: 437 NHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLG 496
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
R G L A E+ K MP G LLGAC+ + E+ E VA +LFELE ++ Y+L
Sbjct: 497 RVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYML 556
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRK 349
+S++Y +W +V ++N +K+RG++K
Sbjct: 557 MSNVYGVKGEWENVEKLRNSVKQRGIKK 584
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 137/272 (50%), Gaps = 4/272 (1%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
V G++I+ D D+ + +I Y K G + A +FD+ K D WS ++S
Sbjct: 57 VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 116
Query: 86 GYAQNGLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
G+ +NG P +A++ F+ M + +V PD +++L+SAC+++ N L + V ++ +
Sbjct: 117 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 176
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+V +L++ AK A LF+ + ++D+ S+ ++I +G A +A+ +FN
Sbjct: 177 -NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 235
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
M+++G P+ A +L AC+ +E+G+ E + + + + +VD+ +
Sbjct: 236 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLETEVKVSTALVDMYMKCF 294
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYG 296
+EAY + +P + S W AL+ G
Sbjct: 295 SPEEAYAVFSRIPRKDVVS-WVALISGFTLNG 325
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
KR + W+ L+ ++ E L F M KPD + + + AC ++ ++ +
Sbjct: 3 KRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEM 62
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ ++ + +V ++LI M KCG M A ++F+E+ K D+ ++ SM+ G +G
Sbjct: 63 IHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNG 122
Query: 194 YAEQAVGLFNKM-LNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMK 241
QAV F +M + + PD +++AC+ HG ++ G
Sbjct: 123 SPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG------FS 176
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
+ S+V S +++ ++S KEA L K M E +W ++ G
Sbjct: 177 NDLSLVNS------LLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVIACYVQNGAAAEA 229
Query: 302 EIVANRLFE--LEPENSSPYVLLSSIYAAAD 330
+V N + + EP ++ +L + AA D
Sbjct: 230 LLVFNDMMDDGTEPNVATVLCVLQACAAAHD 260
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 195/362 (53%), Gaps = 44/362 (12%)
Query: 3 AKRVFVQMPERNLTS----WNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK 58
K+V Q +R L S N+++ VK + +A++ F+ + E+++VS+ +DG +
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 59 VGDIASARALFDKAPKRD----AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
+ A L + +R+ AF ++ L+SG A G +++ E I
Sbjct: 452 NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG---------------SIRKGEQI 496
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
SQV L L+ V ALI M +KCG++D A+++F M
Sbjct: 497 H-------SQVVKLGLS--------------CNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
R++ S+ SMI G + HG+A + + FN+M+ EG+ P+ + IL+ACSH LV EG
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
+F +M + + P EHYACMVDLL R+G L +A+E + +MP ++ W LGAC+
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRV 655
Query: 295 YGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
+ ELG++ A ++ EL+P + Y+ LS+IYA A +W + + ++ KMKER L K GCS
Sbjct: 656 HSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCS 715
Query: 355 WI 356
WI
Sbjct: 716 WI 717
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 157/350 (44%), Gaps = 53/350 (15%)
Query: 43 ERDVVSFTVMIDGYAK-VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQ 101
E DV +ID + K +A +FDK + + W+++I+ Q G P EA++ F
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258
Query: 102 GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC 161
M L + D++ + S+ SAC+++ NL L K + + +S + V +L+DM AKC
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL---VDDVECSLVDMYAKC 315
Query: 162 ---GNMDRANKLFEEMPKRDLFSYCSMIQG-LSIHGYAEQAVGLFNKMLNEGLI-PDNAA 216
G++D K+F+ M + S+ ++I G + A +A+ LF++M+ +G + P++
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 217 FTVILTACSH------GRLV-----------------------------EEGKHYFETMK 241
F+ AC + G+ V E+ + FE++
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES---HASAWGALLGACKFYGEV 298
K ++V Y +D R+ ++A++LL + A + +LL G +
Sbjct: 436 EK-NLVS----YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 299 ELGEIVANRLFELEPENSSPYV-LLSSIYAAADQWLDVSHVKNKMKERGL 347
GE + +++ +L + P L S+Y+ S V N M+ R +
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFD---KAPKRDAFLWSVLIS 85
G L++AR + D+ E D V + +I Y+K GD A A +F+ + KRD WS +++
Sbjct: 81 GKLVHARLIEFDI-EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMA 139
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
Y NG +A+K+F + + P++Y +++ ACS + + + +L ++
Sbjct: 140 CYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFE 199
Query: 146 GQTHVVAALIDMNAKCGN-MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V +LIDM K N + A K+F++M + ++ ++ MI G+ +A+ F
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
M+ G D + + +AC+ + GK
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 143/366 (39%), Gaps = 44/366 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTV----- 51
+NA +VF +M E N+ +W M+ ++ G A + F DM E D + +
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 52 ----------------------------MIDGYAKV---GDIASARALFDKAPKRDAFLW 80
++D YAK G + R +FD+ W
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 81 SVLISGYAQN-GLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
+ LI+GY +N L EA+ +F M +V+P+ + S AC + + + K V
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+ + + V ++I M K M+ A + FE + +++L SY + + G + EQA
Sbjct: 400 FKRGL-ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA 458
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
L +++ L F +L+ ++ + +G+ + K + + ++
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGLSCNQPVCNALIS 517
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+ S+ G + A + M + S + G K + + E + E N
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Query: 319 YVLLSS 324
YV + S
Sbjct: 578 YVAILS 583
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
D A RVF M RN+ SW +M+ G K G I + F+ M E V V++ ++
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 57 AKVGDIASARALFDK-------APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ VG ++ F+ PK + + + ++ + GL +A F+ + M +
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHY--ACMVDLLCRAGLLTDA---FEFINTMPFQ 640
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
D + + + AC N +L K + + +D + L ++ A G + + +
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNEPAAYIQLSNIYACAGKWEESTE 698
Query: 170 LFEEMPKRDLFSY--CSMIQ----------GLSIHGYAEQAVGLFNKMLNE----GLIPD 213
+ +M +R+L CS I+ G + H A Q ++++ E G +PD
Sbjct: 699 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPD 758
Query: 214 N 214
Sbjct: 759 T 759
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 189/308 (61%), Gaps = 7/308 (2%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
T ++D Y+K GD+ SA LFD+ P RD W+ LI+G +EA+++++ ME ++
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
E +V+ + ACS +G++ + + S ++ + A IDM +KCG +D+A +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQ 262
Query: 170 LFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
+FE+ K+ + ++ +MI G ++HG A +A+ +F+K+ + G+ PD+ ++ LTAC H
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
LVE G F M K + + +HY C+VDLLSR+G+L+EA++++ SM + W +L
Sbjct: 323 LVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Query: 289 LGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
LGA + Y +VE+ EI + + E+ N +VLLS++YAA +W DV V++ M+ + ++
Sbjct: 382 LGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVK 441
Query: 349 KLPGCSWI 356
K+PG S+I
Sbjct: 442 KIPGLSYI 449
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 126/273 (46%), Gaps = 14/273 (5%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN------VKPDEY 113
GD++ A +F PK W+ +I G+A + P+ A ++ M + + D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
+ AC++ + C +++ + + + L+D +K G++ A KLF+E
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLS-ADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
MP RD+ S+ ++I GL A +A+ L+ +M EG+ L ACSH V+EG
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 234 KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
++ F + +V + +D+ S+ G + +AY++ + + W ++
Sbjct: 230 ENIFHGYSNDNVIVSNA-----AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 294 FYGEVELGEIVANRLFE--LEPENSSPYVLLSS 324
+GE + ++L + ++P++ S L++
Sbjct: 285 VHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 37/209 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKG--------------------------------- 28
+A ++F +MP R++ SWNA++ GLV G
Sbjct: 162 SAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS 221
Query: 29 --GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK-APKRDAFLWSVLIS 85
GD+ +F +V+ ID Y+K G + A +F++ K+ W+ +I+
Sbjct: 222 HLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMIT 281
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
G+A +G + AL+IF +E +KPD+ ++ ++AC G ++ V ++ ++
Sbjct: 282 GFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVER 341
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEM 174
H ++D+ ++ G + A+ + M
Sbjct: 342 NMKH-YGCVVDLLSRAGRLREAHDIICSM 369
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 203/402 (50%), Gaps = 47/402 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE----------------- 43
+ A+++F +M E N+ SW +++ G G NA +F M E
Sbjct: 81 NTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKA 140
Query: 44 -----------------------RDVVSFTVMIDGYAKVGDIASARALFDK--APKRDAF 78
R++V + ++D Y K D+ +AR +FD R+
Sbjct: 141 CSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVV 200
Query: 79 LWSVLISGYAQNGLPNEALKIFQGME--LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
W+ +I+ YAQN +EA+++F+ L + + +++++ S++SACS +G L K
Sbjct: 201 SWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHG 260
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
+++ + T V +L+DM AKCG++ A K+F + + SY SMI + HG E
Sbjct: 261 LVTRGGYE-SNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGE 319
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
AV LF++M+ + P+ +L ACSH LV EG Y M KY +VP HY C+
Sbjct: 320 AAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCV 379
Query: 257 VDLLSRSGQLKEAYELLKSMPV--ESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
VD+L R G++ EAYEL K++ V E A WGALL A + +G VE+ + RL + +
Sbjct: 380 VDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ 439
Query: 315 NSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+S Y+ LS+ YA + W D ++ +MK G K CSWI
Sbjct: 440 VTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWI 481
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 11/191 (5%)
Query: 48 SFTV--MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-E 104
+FTV ++ Y K+ +I +AR LFD+ + + W+ +ISGY G P AL +FQ M E
Sbjct: 64 TFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHE 123
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
V P+EY S+ ACS + + K + L S + V ++L+DM KC ++
Sbjct: 124 DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIV-VSSSLVDMYGKCNDV 182
Query: 165 DRANKLFEEMP--KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA---AFTV 219
+ A ++F+ M R++ S+ SMI + + +A+ LF + N L D A
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLAS 241
Query: 220 ILTACSH-GRL 229
+++ACS GRL
Sbjct: 242 VISACSSLGRL 252
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 205/399 (51%), Gaps = 44/399 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS----FTV----- 51
+ A++VF ++ +R+L SWNAM+ G V G A F M E ++ FT+
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 52 ----------------------------------MIDGYAKVGDIASARALFDKAPKRDA 77
++D Y K G + SAR FD+ ++
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY 137
WS LI GYAQ G EA+ +F+ ++ +N + D + + S++ + L K +
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 138 LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ + +T V+ +++DM KCG +D A K F EM +D+ S+ +I G HG ++
Sbjct: 339 AVKLPSGL-ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 397
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
+V +F +ML + PD + +L+ACSH +++EG+ F + + + P EHYAC+V
Sbjct: 398 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 457
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
DLL R+G+LKEA L+ +MP++ + W LL C+ +G++ELG+ V L ++ +N +
Sbjct: 458 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA 517
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YV++S++Y A W + + + +GL+K G SW+
Sbjct: 518 NYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 163/361 (45%), Gaps = 53/361 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV---------------- 46
A +VF MPERN+ SW+A++ G V GDL + +F +M + +
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 47 ----------------VSFTVMI-------DGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ F +M+ D Y+K G I A +F + R W+ +
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVK--PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
I+G+ G ++AL F M+ N+K PDE+ + SL+ ACS G + K + +L +S
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 142 SIDI-GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ +L+D+ KCG + A K F+++ ++ + S+ S+I G + G +A+G
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM---V 257
LF ++ D+ A + I+ + L+ +GK M++ +PS + + V
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ----MQALAVKLPSGLETSVLNSVV 355
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
D+ + G + EA + M ++ S W ++ YG+ LG+ +E+ N
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITG---YGKHGLGKKSVRIFYEMLRHNIE 411
Query: 318 P 318
P
Sbjct: 412 P 412
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 16/294 (5%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
++++ +ID Y K + A +FD P+R+ WS L+SG+ NG +L +F M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+ P+E+ + + AC + L+ + + + ++ V +L+DM +KCG +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEM-MVEVGNSLVDMYSKCGRI 158
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI---PDNAAFTVIL 221
+ A K+F + R L S+ +MI G GY +A+ F M+ E I PD T +L
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG-MMQEANIKERPDEFTLTSLL 217
Query: 222 TACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQL---KEAYELLKSM 276
ACS ++ GK H F ++S + S +VDL + G L ++A++ +K
Sbjct: 218 KACSSTGMIYAGKQIHGF-LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-- 274
Query: 277 PVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAAD 330
E +W +L+ GE + RL EL + S + L S I AD
Sbjct: 275 --EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS-FALSSIIGVFAD 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
+VS++ C++ G D V CYL +S + LIDM KC A K+F+ M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLI-TSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
P+R++ S+ +++ G ++G + ++ LF++M +G+ P+ F+ L AC +E+G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 235 --HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
H F +K + M+ E +VD+ S+ G++ EA ++ + + V+ +W A++
Sbjct: 128 QIHGF-CLKIGFEMM--VEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 186/342 (54%), Gaps = 5/342 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N+++ K G +A + + + VS+ +ID K+G+ A +F AP+++
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I+GY +NG +AL+ F M V D + +++ ACS + L K + L
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
G +V AL+++ AKCG++ A++ F ++ +DL S+ +M+ +HG A+QA
Sbjct: 364 IHCGFQ-GYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQA 422
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ L++ M+ G+ PDN F +LT CSH LVEEG FE+M Y + +H CM+D
Sbjct: 423 LKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMID 482
Query: 259 LLSRSGQLKEAYELLKS----MPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE 314
+ R G L EA +L + + S+ S+W LLGAC + ELG V+ L EP
Sbjct: 483 MFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPS 542
Query: 315 NSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+VLLS++Y + +W + V+ +M ERG++K PGCSWI
Sbjct: 543 EEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 140/309 (45%), Gaps = 53/309 (17%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
+V T I AK G IASAR +FD P+ D W+ +++ Y++ GL EA+ +F +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
+ KPD+Y +++S C+ +GN+ + + + +S V +LIDM KC +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGF-CASLPVNNSLIDMYGKCSDTL 122
Query: 166 RANKLFE---------------------------------EMPKRDLFSYCSMIQGLSIH 192
ANK+F EMPKR F++ MI G +
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-------HGRLVEEGKHYFETMKSKYS 245
G E + LF +ML PD F+ ++ ACS +GR+V + +K+ +S
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMV-----HAVMLKNGWS 237
Query: 246 MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVA 305
+ E ++ ++ G +A L+S+ V + S W +++ AC GE E A
Sbjct: 238 --SAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDACMKIGETE----KA 290
Query: 306 NRLFELEPE 314
+F L PE
Sbjct: 291 LEVFHLAPE 299
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 140/315 (44%), Gaps = 43/315 (13%)
Query: 19 NAMVGGLVKGGDLINARKVFDDM--PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRD 76
N+++ K D ++A KVF DM R+ V++ ++ Y +A +F + PKR
Sbjct: 109 NSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV 168
Query: 77 AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS-QVGNLDLAKWV- 134
AF W+++ISG+A G L +F+ M KPD Y SLM+ACS N+ + V
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 135 -----------------------------DCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
D SI++ ++ID K G +
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE 288
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
+A ++F P++++ ++ +MI G +G EQA+ F +M+ G+ D+ A+ +L ACS
Sbjct: 289 KALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS 348
Query: 226 HGRLVEEGKHYFETMK----SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
L+ GK + Y+ V + +V+L ++ G +KEA + +
Sbjct: 349 GLALLGHGKMIHGCLIHCGFQGYAYVGNA-----LVNLYAKCGDIKEADRAFGDIANKDL 403
Query: 282 ASAWGALLGACKFYG 296
S W +L A +G
Sbjct: 404 VS-WNTMLFAFGVHG 417
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 201/362 (55%), Gaps = 9/362 (2%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAK 58
A+ VF M +N+ +WN++V GL L +A + M + D +++ + GYA
Sbjct: 11 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 70
Query: 59 VGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
+G A + K ++ + W+ + SG ++NG ALK+F M+ V P+
Sbjct: 71 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 130
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
M +L+ + L K V + + ++ I +V AL+DM K G++ A ++F +
Sbjct: 131 MSTLLKILGCLSLLHSGKEVHGFCLRKNL-ICDAYVATALVDMYGKSGDLQSAIEIFWGI 189
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK 234
+ L S+ M+ G ++ G E+ + F+ ML G+ PD FT +L+ C + LV+EG
Sbjct: 190 KNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGW 249
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
YF+ M+S+Y ++P+ EH +CMVDLL RSG L EA++ +++M ++ A+ WGA L +CK
Sbjct: 250 KYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKI 309
Query: 295 YGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
+ ++EL EI RL LEP NS+ Y+++ ++Y+ ++W DV ++N M+ +R S
Sbjct: 310 HRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWS 369
Query: 355 WI 356
WI
Sbjct: 370 WI 371
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 184/333 (55%), Gaps = 1/333 (0%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
G ++ G I+ + D V T +I Y+K D+ A +F + + W+ +
Sbjct: 294 GAIRLGKEIHGLAIHSSYDGIDNVRNT-LITMYSKCKDLRHALIVFRQTEENSLCTWNSI 352
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
ISGYAQ EA + + M + +P+ + S++ C+++ NL K CY+ +
Sbjct: 353 ISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKC 412
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
T + +L+D+ AK G + A ++ + M KRD +Y S+I G G A+ LF
Sbjct: 413 FKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFK 472
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M G+ PD+ +L+ACSH +LV EG+ F M+ +Y + P +H++CMVDL R+
Sbjct: 473 EMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRA 532
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G L +A +++ +MP + + W LL AC +G ++G+ A +L E++PEN YVL++
Sbjct: 533 GFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIA 592
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
++YAAA W ++ V+ M++ G++K PGC+WI
Sbjct: 593 NMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWI 625
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 5/258 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK----APK 74
NA++ + ++ AR++FD M ERD VS+ +I+ YA G + A LFDK +
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
W+++ G Q G AL + M D M+ + ACS +G + L K +
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
SS D G +V LI M +KC ++ A +F + + L ++ S+I G +
Sbjct: 303 HGLAIHSSYD-GIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
+E+A L +ML G P++ IL C+ ++ GK + + + +
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421
Query: 255 CMVDLLSRSGQLKEAYEL 272
+VD+ ++SG++ A ++
Sbjct: 422 SLVDVYAKSGKIVAAKQV 439
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
A+++ + + W+VLI+ YA+N L E + ++ M ++PD + S++ AC +
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
++ + V + SS +V ALI M + NM A +LF+ M +RD S+ +
Sbjct: 157 TLDVAFGRVVHGSIEVSSYK-SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNA 215
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+I + G +A LF+KM G+ + +I C
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGC 255
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 42/209 (20%)
Query: 18 WNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
WN++V K G ++ A++V D M +RD V++T +IDGY G+ A ALF +
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKE------ 473
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD----LAKW 133
M +KPD +V+++SACS + L
Sbjct: 474 -------------------------MTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMK 508
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIH 192
+ C + I H + ++D+ + G + +A + MP K ++ +++ IH
Sbjct: 509 MQC---EYGIRPCLQH-FSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIH 564
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
G + K+L + P+N + V++
Sbjct: 565 GNTQIGKWAAEKLLE--MKPENPGYYVLI 591
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 214 bits (544), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 203/390 (52%), Gaps = 40/390 (10%)
Query: 4 KRVFVQMPERNLTSWNAMVGG--------------------LVKGGDLINARKVFDDMPE 43
K VF QM ERN+ SW M+ V LINA K + + E
Sbjct: 331 KSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 44 RDVVSFTVMIDG--------------YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ 89
+ + G YAK + A+ F+ R+ W+ +ISG+AQ
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 90 NGLPNEALKIF--QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ 147
NG +EALK+F E M P+EY S+++A + ++ + + C+ + +
Sbjct: 451 NGFSHEALKMFLSAAAETM---PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNS 507
Query: 148 THVVA-ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
VV+ AL+DM AK GN+D + K+F EM +++ F + S+I S HG E + LF+KM+
Sbjct: 508 CPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMI 567
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
E + PD F +LTAC+ +V++G F M Y++ PS EHY+CMVD+L R+G+L
Sbjct: 568 KENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRL 627
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIY 326
KEA EL+ +P S ++LG+C+ +G V++G VA E++PE S YV + +IY
Sbjct: 628 KEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIY 687
Query: 327 AAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
A ++W + ++ M+++ + K G SWI
Sbjct: 688 AEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 168/373 (45%), Gaps = 57/373 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDL-INARKVFDDM----PERDVVSFT------- 50
A+RVF +M +++ SWN+++ GL + G A +F DM E D VSFT
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 51 ----------------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+++ Y+K G + + +++F + +R+ W+
Sbjct: 288 HETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTT 347
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY-LSQS 141
+IS ++A+ IF M V P+E V L++A N + + + + L
Sbjct: 348 MISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVK--CNEQIKEGLKIHGLCIK 400
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + + V + I + AK ++ A K FE++ R++ S+ +MI G + +G++ +A+ +
Sbjct: 401 TGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKM 460
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGR--LVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
F E + P+ F +L A + V++G+ + K + P + ++D+
Sbjct: 461 FLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL-KLGLNSCPVVSSALLDM 518
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP- 318
++ G + E+ ++ M + + W +++ A +G+ E V N ++ EN +P
Sbjct: 519 YAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDF---ETVMNLFHKMIKENVAPD 574
Query: 319 YVLLSSIYAAADQ 331
V S+ A ++
Sbjct: 575 LVTFLSVLTACNR 587
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 136/330 (41%), Gaps = 53/330 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLIN-------ARKVFDDMPERDVVSFTVMI 53
DNA +F + + ++ SWN ++ G +N A VFD +SF V
Sbjct: 128 DNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGS 187
Query: 54 DG-----------------------------YAKVGDIASARALFDKAPKRDAFLWSVLI 84
+G Y++ G AR +FD+ +D W+ L+
Sbjct: 188 EGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLL 247
Query: 85 SGYAQNG-LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD--CYLS-- 139
SG +Q G EA+ IF+ M V+ D S+++ C +L LA+ + C
Sbjct: 248 SGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+S +++G L+ +KCG ++ +F +M +R++ S+ +MI + AV
Sbjct: 308 ESLLEVGNI-----LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAV 357
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
+F M +G+ P+ F ++ A ++EG + K V P + L
Sbjct: 358 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK-IHGLCIKTGFVSEPSVGNSFITL 416
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALL 289
++ L++A + + + S W A++
Sbjct: 417 YAKFEALEDAKKAFEDITFREIIS-WNAMI 445
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 42/216 (19%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF-----DDMPER-------DVVS 48
++AK+ F + R + SWNAM+ G + G A K+F + MP + ++
Sbjct: 424 EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIA 483
Query: 49 F----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
F + ++D YAK G+I + +F++ +++ F+W
Sbjct: 484 FAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVW 543
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV-DCYLS 139
+ +IS Y+ +G + +F M NV PD +S+++AC++ G +D + + +
Sbjct: 544 TSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+++ H + ++DM + G + A +L E+P
Sbjct: 604 VYNLEPSHEH-YSCMVDMLGRAGRLKEAEELMSEVP 638
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y K G +A +F+ D W+ ++SG+ N + AL M+ V D +
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTY 177
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+ +S C L + + ++ ++ V + I M ++ G+ A ++F+EM
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLE-SDLVVGNSFITMYSRSGSFRGARRVFDEMS 236
Query: 176 KRDLFSYCSMIQGLSIHG-YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
+D+ S+ S++ GLS G + +AV +F M+ EG+ D+ +FT ++T C H
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 170/287 (59%), Gaps = 3/287 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ T +I Y K G I+SAR +FD A ++D W+ +I YA+ GL E + + + M+
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
+KP+ V L+S+C+ + + V L + I + + AL+DM AK G +
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAI-LGTALVDMYAKVGLL 379
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG--LIPDNAAFTVILT 222
++A ++F M +D+ S+ +MI G HG A +AV LFNKM E + P+ F V+L
Sbjct: 380 EKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
ACSHG LV EG F+ M YS P EHY C+VDLL R+GQL+EAYEL++++P+ S +
Sbjct: 440 ACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDS 499
Query: 283 SAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAA 329
+AW ALL AC+ YG +LGE V RL E+ + + +LL+ +A A
Sbjct: 500 TAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVA 546
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 139/332 (41%), Gaps = 42/332 (12%)
Query: 55 GYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
++ V DI A ++F+ + F+++ +I GY+ + P A +F + + D +
Sbjct: 68 AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFS 127
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
++ + +CS+ + + + + +S + T + ALI CG + A K+F+EM
Sbjct: 128 FITTLKSCSRELCVSIGEGLHGIALRSGFMV-FTDLRNALIHFYCVCGKISDARKVFDEM 186
Query: 175 PKR-DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-------- 225
P+ D ++ +++ G A+ LF M ++ + + L+A S
Sbjct: 187 PQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGA 246
Query: 226 ---HGRLVEEG----KHYFET---MKSKYSMVPSPEH------------YACMVDLLSRS 263
H ++ G H M K + S + CM+D +++
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT 306
Query: 264 GQLKEAYELLKSMPVES---HASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
G L+E LL+ M E ++S + LL +C + +G VA+ LE E +
Sbjct: 307 GLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADL---LEEERIALDA 363
Query: 321 LLSS----IYAAADQWLDVSHVKNKMKERGLR 348
+L + +YA + N+MK++ ++
Sbjct: 364 ILGTALVDMYAKVGLLEKAVEIFNRMKDKDVK 395
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 210/400 (52%), Gaps = 45/400 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGD--------LINARKV--------------- 37
+ +++F MPE + SWN+++G L + +NA++
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 38 -----FDDMPER------------DVVSFTVMIDGYAKVGDIASARALFDK-APKRDAFL 79
F ++ ++ + + +I Y K G++ +F + A +RD
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
W+ +ISGY N L +AL + M + D ++ +++SA + V L+ V
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
++ ++ V +AL+DM +KCG +D A + F MP R+ +S+ SMI G + HG E+A+
Sbjct: 647 RACLE-SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 705
Query: 200 GLFNKMLNEGLIP-DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
LF M +G P D+ F +L+ACSH L+EEG +FE+M Y + P EH++CM D
Sbjct: 706 KLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMAD 765
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGA-CKFYG-EVELGEIVANRLFELEPENS 316
+L R+G+L + + ++ MP++ + W +LGA C+ G + ELG+ A LF+LEPEN+
Sbjct: 766 VLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENA 825
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLL ++YAA +W D+ + KMK+ ++K G SW+
Sbjct: 826 VNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 147/307 (47%), Gaps = 17/307 (5%)
Query: 36 KVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNE 95
+++ + ++DV +I+ Y + GD SAR +FD+ P R+ W+ ++SGY++NG E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 96 ALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL--AKWVDCYLSQSSIDIGQTHVVAA 153
AL + M + ++Y VS++ AC ++G++ + + + + + S + V
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV-VSNV 144
Query: 154 LIDMNAKC-GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
LI M KC G++ A F ++ ++ S+ S+I S G A +F+ M +G P
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 213 DNAAF-TVILTACSHGRLVEEGKHYFETMK---SKYSMVPSPEHYACMVDLLSRSGQLKE 268
F +++ TACS L E E + K ++ + +V ++SG L
Sbjct: 205 TEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 269 AYELLKSMPVESHASAWGALLGACKFYGEVELGEIV--ANRLFELEPENSSPYVLLSSI- 325
A ++ M + + G ++G + E ++ N + ++ PE S +LLSS
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFP 319
Query: 326 -YAAADQ 331
Y+ A++
Sbjct: 320 EYSLAEE 326
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 45/232 (19%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------------------PE- 43
A++VF QM RN + N ++ GLV+ A K+F DM PE
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEY 321
Query: 44 -----------RDV---------VSFTV-----MIDGYAKVGDIASARALFDKAPKRDAF 78
R+V V F V +++ YAK G IA AR +F +D+
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I+G QNG EA++ ++ M ++ P + ++S +S+C+ + L + +
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS 190
+ ID+ V AL+ + A+ G ++ K+F MP+ D S+ S+I L+
Sbjct: 442 LKLGIDL-NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 185/313 (59%), Gaps = 3/313 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV + ++ Y G++ +A +F++ P+R+ W+ +ISG+AQ + LK++ M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
P++Y +L+SAC+ G L + V C + H+ +LI M KCG++
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK-SYLHISNSLISMYCKCGDL 272
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML-NEGLIPDNAAFTVILTA 223
A ++F++ +D+ S+ SMI G + HG A QA+ LF M+ G PD + +L++
Sbjct: 273 KDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
C H LV+EG+ +F M +++ + P HY+C+VDLL R G L+EA EL+++MP++ ++
Sbjct: 333 CRHAGLVKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 284 AWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMK 343
WG+LL +C+ +G+V G A LEP+ ++ +V L+++YA+ W + + V+ MK
Sbjct: 392 IWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMK 451
Query: 344 ERGLRKLPGCSWI 356
++GL+ PGCSWI
Sbjct: 452 DKGLKTNPGCSWI 464
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 44/262 (16%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVK--------------------------------- 27
+NA +VF +MPERN+ SW AM+ G +
Sbjct: 172 ENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSAC 231
Query: 28 --GGDLINARKVFDDMPERDVVSF----TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
G L R V + S+ +I Y K GD+ A +FD+ +D W+
Sbjct: 232 TGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWN 291
Query: 82 VLISGYAQNGLPNEALKIFQ-GMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+I+GYAQ+GL +A+++F+ M KPD + ++S+C G + + +++
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAV 199
+ H + L+D+ + G + A +L E MP K + + S++ +HG +
Sbjct: 352 HGLKPELNH-YSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 200 GLFNKMLNEGLIPDNAAFTVIL 221
+ L L PD AA V L
Sbjct: 411 RAAEERLM--LEPDCAATHVQL 430
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
D Y + S + +C + C + I ++ ++L+ + G ++ A K+
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGF-ISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
FEEMP+R++ S+ +MI G + + + L++KM P++ FT +L+AC+ +
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 231 EEGKHYFETMKSKYSMVPSPEHYA-CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+G+ ++ + + S H + ++ + + G LK+A+ + + S W +++
Sbjct: 238 GQGRSVH--CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS-WNSMI 294
Query: 290 GACKFYGEVELGEIVANRLFEL 311
+G + A LFEL
Sbjct: 295 AGYAQHGLA----MQAIELFEL 312
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 160/281 (56%), Gaps = 1/281 (0%)
Query: 76 DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD 135
D W+ +ISGY Q GL E L I+ M + PD+Y S+ ACS + L+ K
Sbjct: 157 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAH 216
Query: 136 CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA 195
+ + I V +AL+DM KC + +++F+++ R++ ++ S+I G HG
Sbjct: 217 AVMIKRCIK-SNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 275
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC 255
+ + F KM EG P+ F V+LTAC+HG LV++G +F +MK Y + P +HYA
Sbjct: 276 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAA 335
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPEN 315
MVD L R+G+L+EAYE + P + H WG+LLGAC+ +G V+L E+ A + EL+P N
Sbjct: 336 MVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTN 395
Query: 316 SSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YV+ ++ YA+ S V+ KM+ G++K PG S I
Sbjct: 396 GGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 436
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
+++ + ++D Y K + +FD+ R+ W+ LISGY +G +E LK F+ M+
Sbjct: 227 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK 286
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI---GQTHVVAALIDMNAKC 161
+P+ + +++AC+ G +D W Y + I GQ + AA++D +
Sbjct: 287 EEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHY--AAMVDTLGRA 343
Query: 162 GNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHG 193
G + A + + P K + S++ IHG
Sbjct: 344 GRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 376
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 195/320 (60%), Gaps = 5/320 (1%)
Query: 30 DLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ 89
D+ A + F+ + + S +I G+ K G + AR +FD+ +D F W+ +ISGYAQ
Sbjct: 609 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ 668
Query: 90 NGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
+ P AL +F+ M VKPD MVS+ SA S +G+L+ K YL+ S+I
Sbjct: 669 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP-PND 727
Query: 149 HVVAALIDMNAKCGNMDRANKLFEE---MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
++ AA+IDM AKCG+++ A +F + + + + ++I G + HG+A+ A+ L++ +
Sbjct: 728 NLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL 787
Query: 206 LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
+ + P++ F +L+AC H LVE GK YFE+MKS + + P +HY CMVDLL ++G+
Sbjct: 788 QSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGR 847
Query: 266 LKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSI 325
L+EA E++K MPV++ WG LL A + +G VE+ E+ A L ++P + V+LS++
Sbjct: 848 LEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNV 907
Query: 326 YAAADQWLDVSHVKNKMKER 345
YA A +W DV+ V+ +M+ R
Sbjct: 908 YADAGRWEDVALVREEMRTR 927
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 133/251 (52%), Gaps = 17/251 (6%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N+++ K L +A VF D + D SF +M+DGY + + A LFD P+R
Sbjct: 334 NSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCV 393
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
++ LI GYAQN +EA+++F+ M + + +E + +++SACS +G + W DC +
Sbjct: 394 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGI----W-DCRM 448
Query: 139 SQS-SIDI---GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
QS +I + G+ V L+ M C + A KLF+EMP+R+L ++ M+ G S G
Sbjct: 449 LQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGL 508
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
EQA LF+++ + ++ ++ ++ C ++E Y+ M + M PS
Sbjct: 509 IEQAEELFDQITEKDIV----SWGTMIDGCLRKNQLDEALVYYTEML-RCGMKPSE---V 560
Query: 255 CMVDLLSRSGQ 265
MVDLLS S +
Sbjct: 561 MMVDLLSASAR 571
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 152/305 (49%), Gaps = 36/305 (11%)
Query: 31 LINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
L +ARK+FD+MPER++V++ VM++GY+K G I A LFD+ ++D W +I G +
Sbjct: 478 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 537
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACS---------QVGNLDLAKWVDCY-LSQ 140
+EAL + M +KP E +MV L+SA + Q+ + + DCY Q
Sbjct: 538 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 597
Query: 141 SSI--------DIG----------QTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLF 180
++I DI + H+ + ALI K G +++A ++F++ +D+F
Sbjct: 598 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 657
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHYFET 239
S+ +MI G + + A+ LF +M++ + PD + +A S +EEGK +
Sbjct: 658 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 717
Query: 240 MKSKYSMVPSPEHY-ACMVDLLSRSGQLKEAYELLKSMP--VESHASAWGALLGACKFYG 296
+ +S +P ++ A ++D+ ++ G ++ A + S S W A++ +G
Sbjct: 718 L--NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHG 775
Query: 297 EVELG 301
+L
Sbjct: 776 HAKLA 780
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 179/312 (57%), Gaps = 2/312 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ + + +ID Y+ + +R +FD+ +D +W+ + +GY Q EAL +F ++
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
L +PDE+ ++++A + ++ L + C L + ++ ++ AL+DM AKCG+
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC-NPYITNALLDMYAKCGSP 606
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ A+K F+ RD+ + S+I + HG ++A+ + KM++EG+ P+ F +L+AC
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
SH LVE+G FE M ++ + P EHY CMV LL R+G+L +A EL++ MP + A
Sbjct: 667 SHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 285 WGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
W +LL C G VEL E A +P++S + +LS+IYA+ W + V+ +MK
Sbjct: 726 WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKV 785
Query: 345 RGLRKLPGCSWI 356
G+ K PG SWI
Sbjct: 786 EGVVKEPGRSWI 797
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 43/265 (16%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF-------DDMP------------- 42
A++VF +MPERNL SW+ MV G + VF D P
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 43 ----------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
+RDV T++ID Y K G+I AR +FD P++ W
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 217
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +ISG + G +L++F + NV PD YI+ +++SACS + L+ K + ++ +
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+++ + ++ LID KCG + A+KLF MP +++ S+ +++ G + ++A+
Sbjct: 278 YGLEMDAS-LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 201 LFNKMLNEGLIPDNAAFTVILTACS 225
LF M GL PD A + ILT+C+
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCA 361
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 151/360 (41%), Gaps = 48/360 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS------------ 48
D A+ VF +PE++ +W M+ G VK G + ++F + E +VV
Sbjct: 200 DYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSAC 259
Query: 49 ---------------------------FTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
V+ID Y K G + +A LF+ P ++ W+
Sbjct: 260 SILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWT 319
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L+SGY QN L EA+++F M +KPD Y S++++C+ + L V Y ++
Sbjct: 320 TLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA 379
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYA---EQA 198
++ ++V +LIDM AKC + A K+F+ D+ + +MI+G S G +A
Sbjct: 380 NLG-NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
+ +F M + P F +L A + + K M KY + + ++D
Sbjct: 439 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSALID 497
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+ S LK++ + M V+ W ++ Y + E N EL+ P
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLV-IWNSMFAG---YVQQSENEEALNLFLELQLSRERP 553
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 14/258 (5%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D ++I+ Y++ G + AR +F+K P+R+ WS ++S +G+ E+L +F
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF-- 133
Query: 103 MELMNVK---PDEYIMVSLMSACSQVGNLDLAKW----VDCYLSQSSIDIGQTHVVAALI 155
+E + P+EYI+ S + ACS + +W + +L +S D +V LI
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKSGFD-RDVYVGTLLI 190
Query: 156 DMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
D K GN+D A +F+ +P++ ++ +MI G G + ++ LF +++ + ++PD
Sbjct: 191 DFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGY 250
Query: 216 AFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKS 275
+ +L+ACS +E GK + +Y + ++D + G++ A++L
Sbjct: 251 ILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 276 MPVESHASAWGALLGACK 293
MP ++ S W LL K
Sbjct: 310 MPNKNIIS-WTTLLSGYK 326
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 210/396 (53%), Gaps = 44/396 (11%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF----DDMPERDVVSFTVM----- 52
+A+R+F ++PERNL S+ +++ G V G+ + A ++F +++ + + +F VM
Sbjct: 176 DARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASA 235
Query: 53 ------------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSV 82
ID Y+K GDI AR F+ P++ W+
Sbjct: 236 GLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNN 295
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+GYA +G EAL + M V D++ + ++ +++ L+L K L ++
Sbjct: 296 VIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG 355
Query: 143 IDIGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
++ +VA AL+D +K G +D A +F+++P++++ S+ +++ G + HG AV
Sbjct: 356 F---ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVK 412
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF KM+ + P++ F +L+AC++ L E+G F +M + + P HYACM++LL
Sbjct: 413 LFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELL 472
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R G L EA ++ P+++ + W ALL AC+ +ELG +VA +L+ + PE YV
Sbjct: 473 GRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYV 532
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
++ ++Y + + + + V ++ +GL +P C+W+
Sbjct: 533 VMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWV 568
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 155/302 (51%), Gaps = 39/302 (12%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSFTVMIDGYAKVGDIASARAL 68
+++++A+V ++ + ++V+ M PE+ +++ +++ + K G I AR L
Sbjct: 123 VSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLM--HVKCGMIIDARRL 180
Query: 69 FDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVG 126
FD+ P+R+ + + +ISG+ G EA ++F+ M EL + + + + ++ A + +G
Sbjct: 181 FDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAV--MLRASAGLG 238
Query: 127 NLDLAKWVD-CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSM 185
++ + K + C L +D T V LIDM +KCG+++ A FE MP++ ++ ++
Sbjct: 239 SIYVGKQLHVCALKLGVVD--NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNV 296
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI-----------LTACSHGRLVEEGK 234
I G ++HGY+E+A+ L M + G+ D +++ LT +H L+ G
Sbjct: 297 IAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG- 355
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
FE+ +V + +VD S+ G++ A + +P ++ S W AL+G
Sbjct: 356 --FES-----EIVAN----TALVDFYSKWGRVDTARYVFDKLPRKNIIS-WNALMGGYAN 403
Query: 295 YG 296
+G
Sbjct: 404 HG 405
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 201/395 (50%), Gaps = 42/395 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKG-------------------------GDLINARKV 37
A +VF + E++L +WN M+ + G L+
Sbjct: 342 AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD 401
Query: 38 FD--DMPERDVVSF---------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
D +M + ++ F +I Y+K G I A LF+++ +++ W+ +ISG
Sbjct: 402 LDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 87 YAQNGLPNEALKIFQGMELMNVK--PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
+ NG P E L+ F + V+ PD Y + +L+S C +L L Y+ +
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG-Q 520
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+T + ALI+M ++CG + + ++F +M ++D+ S+ S+I S HG E AV +
Sbjct: 521 FKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKT 580
Query: 205 MLNEG-LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
M +EG +IPD A F+ +L+ACSH LVEEG F +M + ++ + +H++C+VDLL R+
Sbjct: 581 MQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRA 640
Query: 264 GQLKEAYELLK--SMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVL 321
G L EA L+K + S W AL AC +G+++LG++VA L E E ++ S YV
Sbjct: 641 GHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQ 700
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS+IYA A W + + + G K GCSW+
Sbjct: 701 LSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 146/286 (51%), Gaps = 32/286 (11%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR-DAFLWSVLISGY 87
G+L + +K FD++ E DV S+T ++ K+GDI A +FDK P+R D +W+ +I+G
Sbjct: 106 GNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGC 165
Query: 88 AQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ 147
++G ++++F+ M + V+ D++ +++S C G+LD K V + ++ I
Sbjct: 166 KESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIAS 224
Query: 148 THVVAALIDMNAKCGNMDRANKLFEE--MPKRDLFSYCSMIQGLSIHGYA-EQAVGLFNK 204
+ VV ALI M C + A +FEE + RD ++ +I GL+ G+ ++++ +F K
Sbjct: 225 S-VVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRK 281
Query: 205 MLNEGLIPDNAAFTVILTACS--------HGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
ML L P + F ++ +CS HG ++ G KY++V +
Sbjct: 282 MLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYE-------KYTLVSNA-----T 329
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
+ + S A+++ +S+ E W ++ + Y + +LG+
Sbjct: 330 MTMYSSFEDFGAAHKVFESLE-EKDLVTWNTMISS---YNQAKLGK 371
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 122/257 (47%), Gaps = 30/257 (11%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y+ D +A +F+ ++D W+ +IS Y Q L A+ +++ M ++ VKPDE+
Sbjct: 333 YSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF 392
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
SL++ + L++ + SS + + ALI +K G +++A+ LFE
Sbjct: 393 GSLLATSLDLDVLEMVQACIIKFGLSS----KIEISNALISAYSKNGQIEKADLLFERSL 448
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE--GLIPDNAAFTVILTAC--------- 224
+++L S+ ++I G +G+ + + F+ +L ++PD + +L+ C
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 225 --SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
+H ++ G+ + ET+ ++++ S+ G ++ + E+ M E
Sbjct: 509 SQTHAYVLRHGQ-FKETLIGN-----------ALINMYSQCGTIQNSLEVFNQMS-EKDV 555
Query: 283 SAWGALLGACKFYGEVE 299
+W +L+ A +GE E
Sbjct: 556 VSWNSLISAYSRHGEGE 572
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 143/341 (41%), Gaps = 67/341 (19%)
Query: 3 AKRVFVQMPERN-LTSWNAMVGGLVKGGDLINARKVFDDMPE------------------ 43
A VF +MPER+ + WNAM+ G + G + ++F +M +
Sbjct: 142 AFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD 201
Query: 44 -------RDVVSFTV-------------MIDGYAKVGDIASARALFDKA--PKRDAFLWS 81
+ V S + +I Y + A +F++ RD ++
Sbjct: 202 YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFN 261
Query: 82 VLISGYAQNGLP-NEALKIFQGMELMNVKPDEYIMVSLMSACS------QVGNLDLAKWV 134
V+I G A G +E+L +F+ M +++P + VS+M +CS QV L +
Sbjct: 262 VVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGY 319
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
+ Y T V A + M + + A+K+FE + ++DL ++ +MI +
Sbjct: 320 EKY----------TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
+ A+ ++ +M G+ PD F +L ++E + K+ + E
Sbjct: 370 GKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGLSSKIEISN 425
Query: 255 CMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFY 295
++ S++GQ+++A +LL + + +W A++ FY
Sbjct: 426 ALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISG--FY 463
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 34/179 (18%)
Query: 84 ISGYAQNGLPNEALKIFQGME-LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++G ++G ALK+F + ++PD+Y + ++ + + V CY +S
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS------------------ 184
+ + +HV L+ + + GN+ K F+E+ + D++S+ +
Sbjct: 88 L-LCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVF 146
Query: 185 --------------MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
MI G GY E +V LF +M G+ D F IL+ C +G L
Sbjct: 147 DKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL 205
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 205/400 (51%), Gaps = 53/400 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVK------GGDLINARKVFDDMP-------------- 42
A VF QM +N SW AM+ G V G DL A + + P
Sbjct: 204 AFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE 263
Query: 43 -----------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFL 79
ER +F M Y + G+++ +R LF+ + RD +
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTM---YCRCGNVSLSRVLFETSKVRDVVM 320
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
WS +ISGYA+ G +E + + M ++ + +++++SAC+ L A V +
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQIL 380
Query: 140 QSSIDIGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
+ +H++ ALIDM AKCG++ A ++F E+ ++DL S+ SMI +HG+ +
Sbjct: 381 KCGF---MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSE 437
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
A+ +F M+ G D+ AF IL+AC+H LVEE + F T KY M + EHYAC +
Sbjct: 438 ALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYI 496
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVEL-GEIVANRLFELEPENS 316
+LL R G++ +A+E+ +MP++ A W +LL AC+ +G +++ G+I+AN L + EP+N
Sbjct: 497 NLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNP 556
Query: 317 SPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ YVLLS I+ + + V+ M+ R L K G S I
Sbjct: 557 ANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 132/280 (47%), Gaps = 10/280 (3%)
Query: 22 VGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+G K + +A + D+ + V+ T ++D Y K D A+A +FD+ ++ W+
Sbjct: 161 MGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWT 220
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVG-NLDLAKWVDCYLSQ 140
+ISG N + +F+ M+ N++P+ ++S++ AC ++ L K + + +
Sbjct: 221 AMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFR 280
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ + AA + M +CGN+ + LFE RD+ + SMI G + G + +
Sbjct: 281 HGCHADE-RLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMN 339
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA---CMV 257
L N+M EG+ ++ I++AC++ L+ + T+ S+ H ++
Sbjct: 340 LLNQMRKEGIEANSVTLLAIVSACTNSTLLS----FASTVHSQILKCGFMSHILLGNALI 395
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
D+ ++ G L A E+ + E +W +++ A +G
Sbjct: 396 DMYAKCGSLSAAREVFYEL-TEKDLVSWSSMINAYGLHGH 434
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D V +I YAK + R +FD+ RD + +I+ Q+GL EA+K+ + M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 105 LMNVKPDEYIMVSLMSACSQVGN-------LDLAKWVDCYLSQSSIDIGQTHVVAALIDM 157
P ++ SL++ C+++G+ VD + +S + + AL+DM
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVL------LSTALVDM 194
Query: 158 NAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF 217
K + A +F++M ++ S+ +MI G + E V LF M E L P+
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTL 254
Query: 218 TVILTAC 224
+L AC
Sbjct: 255 LSVLPAC 261
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEY--IMVSLMSACS-QVGNLDLAKWVDCYLSQ 140
+ G + +EAL++++ +++ ++ + + I+ S++ AC+ Q L + C +
Sbjct: 17 LKGLVSDQFYDEALRLYK-LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ D T V +LI M AK K+F+EM RD SYCS+I G +A+
Sbjct: 76 AGADC-DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMK 134
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSH-GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
L +M G IP + +L C+ G + + + + M S +VD+
Sbjct: 135 LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDM 194
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
+ A+ + M V++ S W A++ C E+G
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMG 235
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 207/396 (52%), Gaps = 41/396 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS----FTVMIDG- 55
D+A ++F QMP +N+ SW M+ GL + A +F +M + S FT +I
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 56 ----------------------------------YAKVGDIASARALFDKAPKRDAFLWS 81
YA I +R +FD+ +W+
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L+SGY+ N +AL IF GM ++ P++ S +++CS +G LD K + +
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ V +L+ M + GN++ A +F ++ K+ + S+ S+I G + HG + A +
Sbjct: 356 GLET-DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSP-EHYACMVDLL 260
F +M+ PD FT +L+ACSH +E+G+ F M S + + +HY CMVD+L
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDIL 474
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R G+LKEA EL++ M V+ + W ALL AC+ + +V+ GE A +F L+ ++S+ YV
Sbjct: 475 GRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LLS+IYA+A +W +VS ++ KMK+ G+ K PG SW+
Sbjct: 535 LLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 170/355 (47%), Gaps = 34/355 (9%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGD 61
+A +F +MP R++ SWN+M+ G V+ GD+ A K+FD+MPER VVS+T M++G + G
Sbjct: 84 DALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGK 143
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ A LF + P +D W+ ++ GY Q G ++ALK+F+ M NV ++ L
Sbjct: 144 VDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQN 203
Query: 122 CSQVGNLDLAK-WVDCYLSQSS--------------------------IDIG---QTHVV 151
LDL K + C + +S I +G + +V
Sbjct: 204 ERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVS 263
Query: 152 AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
A+LI A C + + K+F+E + + +++ G S++ E A+ +F+ ML ++
Sbjct: 264 ASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL 323
Query: 212 PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYE 271
P+ + F L +CS ++ GK + K + +V + S SG + +A
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKE-MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVS 382
Query: 272 LLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFEL--EPENSSPYVLLSS 324
+ + +S S W +++ C +G + ++ ++ L EP+ + LLS+
Sbjct: 383 VFIKIFKKSIVS-WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSA 436
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 34 ARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
AR+VF+ +P V +T MI GY + + A LFD+ P RD W+ +ISG + G
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDM 113
Query: 94 NEALKIFQGMELMNVKPDEYIM--VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV 151
N A+K+F M P+ ++ ++++ C + G +D A+ + + + T
Sbjct: 114 NTAVKLFDEM------PERSVVSWTAMVNGCFRSGKVDQAERL-----FYQMPVKDTAAW 162
Query: 152 AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
+++ + G +D A KLF++MP +++ S+ +MI GL + + +A+ LF ML +
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 212 PDNAAFTVILTACSHG 227
+ FT ++TAC++
Sbjct: 223 STSRPFTCVITACANA 238
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 207 bits (527), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 206/399 (51%), Gaps = 43/399 (10%)
Query: 1 DNAKRVFVQMPERNLTS-WNAMVGGLVKGGDLINARKVFDDMPER--------------- 44
++A++VF ++P+R+ + WNA+V G + +A VF M E
Sbjct: 212 EDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSA 271
Query: 45 ------------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
D+V +ID Y K + A ++F+ +RD F W
Sbjct: 272 FTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTW 331
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ ++ + G + L +F+ M ++PD + +++ C ++ +L + + Y+
Sbjct: 332 NSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIV 391
Query: 141 SSI---DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
S + + +L+DM KCG++ A +F+ M +D S+ MI G + E
Sbjct: 392 SGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGEL 451
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
A+ +F+ M G+ PD F +L ACSH + EG+++ M++ Y+++P+ +HYAC++
Sbjct: 452 ALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVI 511
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
D+L R+ +L+EAYEL S P+ + W ++L +C+ +G +L + RL ELEPE+
Sbjct: 512 DMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCG 571
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVL+S++Y A ++ +V V++ M+++ ++K PGCSWI
Sbjct: 572 GYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 15/267 (5%)
Query: 35 RKVF-DDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLP 93
RK F DD P + T +++ YAK G + A +F +RD F ++ LISG+ NG P
Sbjct: 88 RKGFLDDSPR----AGTSLVNMYAKCGLMRRAVLVF-GGSERDVFGYNALISGFVVNGSP 142
Query: 94 NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA 153
+A++ ++ M + PD+Y SL+ S L K V + D +V +
Sbjct: 143 LDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFD-SDCYVGSG 200
Query: 154 LIDMNAKCGNMDRANKLFEEMPKR-DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
L+ +K +++ A K+F+E+P R D + +++ G S E A+ +F+KM EG+
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV 260
Query: 213 DNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
T +L+A + ++ G+ H S + ++D+ +S L+EA
Sbjct: 261 SRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN---ALIDMYGKSKWLEEAN 317
Query: 271 ELLKSMPVESHASAWGALLGACKFYGE 297
+ ++M E W ++L + G+
Sbjct: 318 SIFEAMD-ERDLFTWNSVLCVHDYCGD 343
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 207 bits (527), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 186/325 (57%), Gaps = 21/325 (6%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ-----NGLPNEALKIFQGME 104
T ++ YAK GD+ AR +FD+ P+R + W+ +I GY N +A+ +F+
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 105 LMN--VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ----SSIDIGQTHVVAALIDMN 158
V+P + MV ++SA SQ G L++ V Y+ + +D+ + AL+DM
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDV---FIGTALVDMY 267
Query: 159 AKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
+KCG ++ A +FE M +++F++ SM GL+++G + L N+M G+ P+ FT
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 219 VILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
+L+A H LVEEG F++MK+++ + P EHY C+VDLL ++G+++EAY+ + +MP+
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI 387
Query: 279 ESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS-------PYVLLSSIYAAADQ 331
+ A +L AC YGE +GE + L E+E E+ YV LS++ A +
Sbjct: 388 KPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGK 447
Query: 332 WLDVSHVKNKMKERGLRKLPGCSWI 356
W++V ++ +MKER ++ PG S++
Sbjct: 448 WVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 55/243 (22%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDL--INARKV----------------------- 37
A++VF +MPER +WNAM+GG D NARK
Sbjct: 166 ARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVC 225
Query: 38 -----------------------FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPK 74
PE DV T ++D Y+K G + +A ++F+
Sbjct: 226 VLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKV 285
Query: 75 RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV 134
++ F W+ + +G A NG NE + M +KP+E SL+SA +G ++ + +
Sbjct: 286 KNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVE--EGI 343
Query: 135 DCYLSQSSIDIGQTHVV---AALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLS 190
+ + S + G T V+ ++D+ K G + A + MP K D S+ S
Sbjct: 344 ELFKSMKT-RFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACS 402
Query: 191 IHG 193
I+G
Sbjct: 403 IYG 405
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 175/307 (57%), Gaps = 1/307 (0%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ +++ Y+K G + AR ++D+ P+ D S LISGY+Q+GL + +F+ M +
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
D + + S++ A + L V Y+++ + + V ++L+ M +K G++D K
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGL-CTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
F ++ DL ++ ++I + HG A +A+ ++N M +G PD F +L+ACSHG L
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
VEE + +M Y + P HY CMVD L RSG+L+EA + +M ++ A WG LL
Sbjct: 769 VEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLL 828
Query: 290 GACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRK 349
ACK +GEVELG++ A + ELEP ++ Y+ LS+I A +W +V + MK G++K
Sbjct: 829 AACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQK 888
Query: 350 LPGCSWI 356
PG S +
Sbjct: 889 EPGWSSV 895
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 153/317 (48%), Gaps = 49/317 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV------VSFTV----- 51
A VF ++P ++ SW M+ G K D +A ++F +M V V+ +
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 52 ----------------------------MIDGYAKVGDIASARALF---DKAPKRDAFLW 80
+I Y+K GDI + +F D +++ +
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN--IV 421
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+V+I+ ++Q+ P +A+++F M ++ DE+ + SL+S + L+L K V Y +
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLK 478
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S + + T V ++L + +KCG+++ + KLF+ +P +D + SMI G + +GY +A+G
Sbjct: 479 SGLVLDLT-VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIG 537
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
LF++ML++G PD + +LT CS + GK + + + + +V++
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE-IHGYTLRAGIDKGMDLGSALVNMY 596
Query: 261 SRSGQLKEAYELLKSMP 277
S+ G LK A ++ +P
Sbjct: 597 SKCGSLKLARQVYDRLP 613
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 140/274 (51%), Gaps = 13/274 (4%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
++ G ++ AR + DV T ++D YAK G +A A +F + P W+V++S
Sbjct: 267 LRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLS 324
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GY ++ AL+IF+ M V+ + + S++SAC + + A V ++ +S +
Sbjct: 325 GYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL 384
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEM---PKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V AALI M +K G++D + ++FE++ ++++ + MI S +A+ LF
Sbjct: 385 -DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNV--MITSFSQSKKPGKAIRLF 441
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+ML EGL D + +L+ L ++ Y T+KS +V + + L S+
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY--TLKS--GLVLDLTVGSSLFTLYSK 497
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
G L+E+Y+L + +P + +A W +++ YG
Sbjct: 498 CGSLEESYKLFQGIPFKDNA-CWASMISGFNEYG 530
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 14/250 (5%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV ++ Y+ G +A A LFD P+ D +++ISGY Q+ L E+L+ F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH---VVAALIDMNAKC 161
+ + +E S++SACS + ++ V C+ +I +G V +ALID+ +K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCH----TIKMGYFFYEVVESALIDVFSKN 198
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
+ A K+F + +++ + ++I G + LF++M PD+ ++ +L
Sbjct: 199 LRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVL 258
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVE 279
AC+ + GK ++++ + + + C +VDL ++ G + EA E+ +P
Sbjct: 259 AACASLEKLRFGK----VVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNP 314
Query: 280 SHASAWGALL 289
S S W +L
Sbjct: 315 SVVS-WTVML 323
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 198/397 (49%), Gaps = 47/397 (11%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS--FTV--------- 51
++RV +QMP R++ +WNA++GG + D A F M V S TV
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475
Query: 52 -----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+I YAK GD++S++ LF+ R+ W+
Sbjct: 476 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 535
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+++ A +G E LK+ M V D++ +SA +++ L+ + L +
Sbjct: 536 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ----QLHGLA 591
Query: 143 IDIGQTH---VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+ +G H + A DM +KCG + K+ R L S+ +I L HGY E+
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 651
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDL 259
F++ML G+ P + F +LTACSHG LV++G Y++ + + + P+ EH C++DL
Sbjct: 652 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 711
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY 319
L RSG+L EA + MP++ + W +LL +CK +G ++ G A L +LEPE+ S Y
Sbjct: 712 LGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY 771
Query: 320 VLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
VL S+++A +W DV +V+ +M + ++K CSW+
Sbjct: 772 VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 808
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 159/337 (47%), Gaps = 43/337 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFT-------- 50
A VF QMP ++L SWN+++ V G ++A + M + V+FT
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 51 -------------VMIDG--------------YAKVGDIASARALFDKAPKRDAFLWSVL 83
V++ G Y K+G+++ +R + + P+RD W+ L
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN-LDLAKWVDCYLSQSS 142
I GYA++ P++AL FQ M + V + +VS++SAC G+ L+ K + Y+ +
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ HV +LI M AKCG++ + LF + R++ ++ +M+ + HG+ E+ + L
Sbjct: 495 FE-SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 553
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+KM + G+ D +F+ L+A + ++EEG+ + K + D+ S+
Sbjct: 554 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSK 612
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
G++ E ++L V +W L+ A +G E
Sbjct: 613 CGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFE 648
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 148/301 (49%), Gaps = 22/301 (7%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y K G + AR LFD P R+ W+ ++SG + GL E ++ F+ M + +KP +++
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 116 VSLMSACSQVGNL-DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
SL++AC + G++ V ++++S + + +V A++ + G + + K+FEEM
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE-- 232
P R++ S+ S++ G S G E+ + ++ M EG+ + + ++++++C G L +E
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC--GLLKDESL 178
Query: 233 GKHYF-ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
G+ + +KS + E+ ++ +L G + A + M E +W ++ A
Sbjct: 179 GRQIIGQVVKSGLESKLAVEN--SLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAA 235
Query: 292 CKFYGEVELGEIVAN--RLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRK 349
G +E + + R F E +++ LLS + HV ++ RG+
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL----------GHVDHQKWGRGIHG 285
Query: 350 L 350
L
Sbjct: 286 L 286
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 160/380 (42%), Gaps = 74/380 (19%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGD---LINARK----------------------- 36
+++VF +MP+RN+ SW +++ G G+ +I+ K
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL 172
Query: 37 VFDDMPERDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ D+ R ++ V +I +G++ A +FD+ +RD W+ +
Sbjct: 173 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 232
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
+ YAQNG E+ +IF LM DE ++ + S +G++D KW + +
Sbjct: 233 AAAYAQNGHIEESFRIFS---LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG-IHGLVV 288
Query: 144 DIGQTHVVA---ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+G VV L+ M A G AN +F++MP +DL S+ S++ G + A+G
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 201 LFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVPS 249
L M++ G + FT L AC HG +V G Y + + +
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN------- 401
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLF 309
+V + + G++ E+ +L MP AW AL+G Y E E +
Sbjct: 402 -----ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG---YAEDEDPDKALAAFQ 452
Query: 310 ELEPEN-SSPYVLLSSIYAA 328
+ E SS Y+ + S+ +A
Sbjct: 453 TMRVEGVSSNYITVVSVLSA 472
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 53/334 (15%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE------------------- 43
A+ +F MP RN SWN M+ G+V+ G + + F M +
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 44 ---------------------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
DV T ++ Y G ++ +R +F++ P R+ W+
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 130
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
L+ GY+ G P E + I++GM V +E M ++S+C + + L + + + +S
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 190
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
++ + V +LI M GN+D AN +F++M +RD S+ S+ + +G+ E++ +F
Sbjct: 191 LE-SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLS 261
+ M ++ + +L+ H + G+ + +K + V C+ + L
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV------VCVCNTLL 303
Query: 262 R----SGQLKEAYELLKSMPVESHASAWGALLGA 291
R +G+ EA + K MP + S W +L+ +
Sbjct: 304 RMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMAS 336
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 137/340 (40%), Gaps = 45/340 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP--ERDVVSFTV------- 51
D A +F QM ER+ SWN++ + G + + ++F M +V S TV
Sbjct: 212 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 271
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++ YA G A +F + P +D W+
Sbjct: 272 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 331
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
L++ + +G +AL + M + S ++AC + + + + S
Sbjct: 332 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 391
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ Q + AL+ M K G M + ++ +MP+RD+ ++ ++I G + ++A+
Sbjct: 392 GLFYNQI-IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450
Query: 202 FNKMLNEGLIPDNAAFTVILTAC-SHGRLVEEGKHYFETMKSKYSMVPSPEHYA-CMVDL 259
F M EG+ + +L+AC G L+E GK + S + S EH ++ +
Sbjct: 451 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS--AGFESDEHVKNSLITM 508
Query: 260 LSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
++ G L + +L + + W A+L A +G E
Sbjct: 509 YAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 547
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 199/355 (56%), Gaps = 7/355 (1%)
Query: 3 AKRVFVQMPER-NLTSWNAMVGGL--VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKV 59
A+++F ++ E N +WN M+ G V G ++ V + + + +ID Y K+
Sbjct: 374 AEKLFCRISEEGNKEAWNTMLKGYGAVLLGKSLHCYVVKTSL-DLTISVVNSLIDLYGKM 432
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
GD+ A +F +A + W+ +I+ Y +A+ +F M N KP +V+L+
Sbjct: 433 GDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 491
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
AC G+L+ + + Y++++ ++ + + AALIDM AKCG+++++ +LF+ ++D
Sbjct: 492 MACVNTGSLERGQMIHRYITETEHEMNLS-LSAALIDMYAKCGHLEKSRELFDAGNQKDA 550
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+ MI G +HG E A+ LF++M + P F +L+AC+H LVE+GK F
Sbjct: 551 VCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLK 610
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE 299
M +Y + P+ +HY+C+VDLLSRSG L+EA + SMP WG LL +C +GE E
Sbjct: 611 MH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFE 669
Query: 300 LGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
+G +A R +P+N Y++L+++Y+AA +W + + M+E G+ K G S
Sbjct: 670 MGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 724
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 22 VGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
VG V G L+ FD R+ + Y+K G + A +FD+ P RD W+
Sbjct: 143 VGTFVHG--LVLKHGGFD----RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWT 196
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNV---KPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
+ISG+ QNG L M KP+ + ACS +G L + + +
Sbjct: 197 AIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFA 256
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ + V +++ +K GN A F E+ D+FS+ S+I L+ G E++
Sbjct: 257 VKNGL-ASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEES 315
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM-KSKYSMVPSPEHYACMV 257
+F +M N+G+ PD + ++ LV +GK + T+ S SM C
Sbjct: 316 FDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGTVCNSLLSMY-------CKF 368
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
+LLS A +L + E + AW +L K YG V LG+
Sbjct: 369 ELLSV------AEKLFCRISEEGNKEAWNTML---KGYGAVLLGK 404
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 9/253 (3%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I YA G + +F +RD FLW+ +I + NG +L F M L PD
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPD 124
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+ ++SAC+++ + +V + + T V A+ + +KCG + A +F
Sbjct: 125 HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL---IPDNAAFTVILTACSHGR 228
+EMP RD+ ++ ++I G +G +E +G KM + G P+ ACS+
Sbjct: 185 DEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLG 244
Query: 229 LVEEGK--HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
++EG+ H F K + S + M S+SG EAY + + E S W
Sbjct: 245 ALKEGRCLHGFAV---KNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS-WT 300
Query: 287 ALLGACKFYGEVE 299
+++ + G++E
Sbjct: 301 SIIASLARSGDME 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 154/319 (48%), Gaps = 30/319 (9%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALF----DKAPKRDAFLWSV 82
K G+ A F ++ + D+ S+T +I A+ GD+ + +F +K D + S
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISC 336
Query: 83 LIS----------GYAQNG-LPNEALKIFQGMELMNVKPDEYIMVS-------LMSACSQ 124
LI+ G A +G + N L ++ EL++V + +S +
Sbjct: 337 LINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG 396
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
G + L K + CY+ ++S+D+ VV +LID+ K G++ A ++F E ++ ++ +
Sbjct: 397 YGAVLLGKSLHCYVVKTSLDL-TISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNA 454
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKS 242
MI +E+A+ LF++M++E P + +L AC + +E G+ H + T ++
Sbjct: 455 MIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT-ET 513
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
++ M S A ++D+ ++ G L+++ EL + + A W ++ +G+VE
Sbjct: 514 EHEMNLSLS--AALIDMYAKCGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVESAI 570
Query: 303 IVANRLFELEPENSSPYVL 321
+ +++ E + + + P L
Sbjct: 571 ALFDQMEESDVKPTGPTFL 589
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 172/310 (55%), Gaps = 11/310 (3%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
M+ Y+ G++ SA LF RD WS +I GY Q G E K F M KP
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 112 EYIMVSLMSACSQVGNLDLAKWVD----CY-LSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
++ + SL+S + ++ + V C+ L Q+S V ++LI+M +KCG++
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNST------VRSSLINMYSKCGSIKE 464
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
A+ +F E + D+ S +MI G + HG +++A+ LF K L G PD+ F +LTAC+H
Sbjct: 465 ASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTH 524
Query: 227 GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
++ G HYF M+ Y+M P+ EHY CMVDLL R+G+L +A +++ M + W
Sbjct: 525 SGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWT 584
Query: 287 ALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERG 346
LL ACK G++E G A R+ EL+P ++ V L++IY++ + ++V+ MK +G
Sbjct: 585 TLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKG 644
Query: 347 LRKLPGCSWI 356
+ K PG S I
Sbjct: 645 VIKEPGWSSI 654
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 133/308 (43%), Gaps = 41/308 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFT---------- 50
D + RVF +MP RN +W A++ GLV G F +M + +S T
Sbjct: 160 DKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC 219
Query: 51 ---------------VMIDG--------------YAKVGDIASARALFDKAPKRDAFLWS 81
V++ G Y + G++ LF+ +RD W+
Sbjct: 220 AGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
LI Y + G +A++ F M V P+E S+ SAC+ + L + + C +
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL 339
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
++ V +++ M + CGN+ A+ LF+ M RD+ S+ ++I G G+ E+
Sbjct: 340 GLN-DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKY 398
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F+ M G P + A +L+ + ++E G+ + + + + + ++++ S
Sbjct: 399 FSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYS 457
Query: 262 RSGQLKEA 269
+ G +KEA
Sbjct: 458 KCGSIKEA 465
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 124/242 (51%), Gaps = 9/242 (3%)
Query: 60 GDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN--VKPDEYIMVS 117
G++ +AR +FDK P D W+ +I Y +EAL +F M +++ V PD ++
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 118 LMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR 177
++ AC Q N+ + + Y ++S+ + +V ++L+DM + G +D++ ++F EMP R
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--H 235
+ ++ ++I GL G ++ + F++M + D F + L AC+ R V+ GK H
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFY 295
++ + + A M + G++++ L ++M E +W +L+ A K
Sbjct: 233 THVIVRGFVTTLCVANSLATM---YTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRI 288
Query: 296 GE 297
G+
Sbjct: 289 GQ 290
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 134/342 (39%), Gaps = 49/342 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGD------LINARKVFDDM--PERDVVSFTV--- 51
A++VF +MP ++ SW +++ V + L +A +V D P+ V+S +
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
++D Y +VG I + +F + P R+A W+
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I+G G E L F M D Y + AC+ + + K + ++
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ V +L M +CG M LFE M +RD+ S+ S+I G +AV
Sbjct: 239 GF-VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 202 FNKMLNEGLIPDNAAFTVILTAC-SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
F KM N + P+ F + +AC S RLV + + + + S M+ +
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL--SLGLNDSLSVSNSMMKMY 355
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGE 302
S G L A L + M S W ++G Y + GE
Sbjct: 356 STCGNLVSASVLFQGMRCRDIIS-WSTIIGG---YCQAGFGE 393
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 35/234 (14%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
E+N T ++++ K G + A +F + D+VS T MI+GYA+ G A LF+K
Sbjct: 443 EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
+ K + +PD +S+++AC+ G LDL
Sbjct: 503 SLK-------------------------------VGFRPDSVTFISVLTACTHSGQLDLG 531
Query: 132 -KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGL 189
+ + ++ + H ++D+ + G + A K+ EM K+D + +++
Sbjct: 532 FHYFNMMQETYNMRPAKEH-YGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
G E+ ++L A T+ S G L EE + + MK+K
Sbjct: 591 KAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNL-EEAANVRKNMKAK 643
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 189/312 (60%), Gaps = 2/312 (0%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV + ++D YAK G+I AR +FD+ P+R+ WS ++ GYAQ G EAL +F+
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
N+ ++Y S++S C+ L+L + + LS S + V ++L+ + +KCG
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+ A ++F E+P ++L + +M++ + H + ++ + LF +M G+ P+ F +L AC
Sbjct: 269 EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
SH LV+EG++YF+ MK + P+ +HYA +VD+L R+G+L+EA E++ +MP++ S
Sbjct: 329 SHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 285 WGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
WGALL +C + EL A+++FEL P +S ++ LS+ YAA ++ D + + +++
Sbjct: 388 WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRD 447
Query: 345 RGLRKLPGCSWI 356
RG +K G SW+
Sbjct: 448 RGEKKETGLSWV 459
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 136/240 (56%), Gaps = 3/240 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I+ Y+K +R F+ +P++ + WS +IS +AQN LP +L+ + M N++PD
Sbjct: 56 LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPD 115
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
++++ S +C+ + D+ + V C ++ D V ++L+DM AKCG + A K+F
Sbjct: 116 DHVLPSATKSCAILSRCDIGRSVHCLSMKTGYD-ADVFVGSSLVDMYAKCGEIVYARKMF 174
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
+EMP+R++ ++ M+ G + G E+A+ LF + L E L ++ +F+ +++ C++ L+E
Sbjct: 175 DEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLE 234
Query: 232 EGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
G+ + K S S + +V L S+ G + AY++ +PV++ W A+L A
Sbjct: 235 LGRQ-IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN-LGIWNAMLKA 292
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 201/399 (50%), Gaps = 49/399 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------- 42
NA++VF +MP+R LT+WNAM+ GL++ +F +M
Sbjct: 43 NARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSA 102
Query: 43 --------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
E D+V + + Y + G + + P R+ W+
Sbjct: 103 GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNT 162
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQS 141
LI G AQNG P L +++ M++ +P++ V+++S+CS DLA + +
Sbjct: 163 LIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS-----DLAIRGQGQQIHAE 217
Query: 142 SIDIGQTHVVAA---LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+I IG + VVA LI M +KCG + A K F E D + SMI HG ++A
Sbjct: 218 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 277
Query: 199 VGLFNKMLNEGLIPDN-AAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
+ LFN M + + N AF +L ACSH L ++G F+ M KY P +HY C+V
Sbjct: 278 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 337
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
DLL R+G L +A +++SMP+++ W LL AC + E+ + V + +++P +S+
Sbjct: 338 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 397
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
YVLL++++A+A +W DVS V+ M+++ ++K G SW
Sbjct: 398 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWF 436
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 143/307 (46%), Gaps = 3/307 (0%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K GD +A V+ M +++ +S ++I+GY + GD+ +AR +FD+ P R W+ +I+G
Sbjct: 6 KLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 65
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
Q E L +F+ M + PDEY + S+ S + + ++ + + + Y + +++
Sbjct: 66 LIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD 125
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
V ++L M + G + + MP R+L ++ ++I G + +G E + L+ M
Sbjct: 126 LV-VNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
G P+ F +L++CS + +G+ K + ++ + S+ G L
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQ-IHAEAIKIGASSVVAVVSSLISMYSKCGCL 243
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIY 326
+A + E W +++ A F+G+ + + N + E + L+ +Y
Sbjct: 244 GDAAKAFSEREDEDEV-MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 327 AAADQWL 333
A + L
Sbjct: 303 ACSHSGL 309
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 208/399 (52%), Gaps = 43/399 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGG-----------------LVKG--------GDLINAR 35
+ A+ F M ER+L SWNAM+ G L +G G L+ A
Sbjct: 165 EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRAS 224
Query: 36 ---KVFDDMPE-----------RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
K + + E R +++ Y K G +A+A L + KRD +
Sbjct: 225 IVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCT 284
Query: 82 VLISGYAQ-NGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
LI+G++Q N ++A IF+ M M K DE ++ S++ C+ + ++ + + + + +
Sbjct: 285 ALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALK 344
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
SS + +LIDM AK G ++ A FEEM ++D+ S+ S+I G HG E+A+
Sbjct: 345 SSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAID 404
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
L+N+M +E + P++ F +L+ACSH E G ++TM +K+ + EH +C++D+L
Sbjct: 405 LYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDML 464
Query: 261 SRSGQLKEAYELLKSMP--VESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+RSG L+EAY L++S V +S WGA L AC+ +G V+L ++ A +L +EP
Sbjct: 465 ARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVN 524
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERG-LRKLPGCSWI 356
Y+ L+S+YAA W + + + MKE G K PG S +
Sbjct: 525 YINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 1/173 (0%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
++ID Y K GD+ AR LFD+ KRD W+ +IS +++ G +AL +F+ M +VK
Sbjct: 52 MLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKA 111
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+++ S++ +C +G L + + + + G V +AL+ + A+CG M+ A
Sbjct: 112 NQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNC-AGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
F+ M +RDL S+ +MI G + + A+ + LF ML EG PD F +L A
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 157/370 (42%), Gaps = 54/370 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV--------------- 46
+A+++F ++ +R++ SW AM+ + G +A +F +M DV
Sbjct: 65 HARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCK 124
Query: 47 ------------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ + ++ YA+ G + AR FD +RD W+
Sbjct: 125 DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNA 184
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I GY N + + +FQ M KPD + SL+ A V L++ L +
Sbjct: 185 MIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVS----ELHGLA 240
Query: 143 IDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLS-IHGYAEQA 198
I +G + ++ +L++ KCG++ A KL E KRDL S ++I G S + A
Sbjct: 241 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETMKSKYSMVPSPEHYACM 256
+F M+ D + +L C+ V G+ H F S+ + + +
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN--SL 358
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRL--FELEPE 314
+D+ ++SG++++A + M E +W +L+ +G E + NR+ ++P
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPN 417
Query: 315 NSSPYVLLSS 324
+ + LLS+
Sbjct: 418 DVTFLSLLSA 427
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
LID+ K G++ A KLF+ + KRD+ S+ +MI S GY A+ LF +M E + +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 214 NAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
+ +L +C ++EG +++ K + + + ++ L +R G+++EA
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVE-KGNCAGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 274 KSMPVESHASAWGALL 289
SM E +W A++
Sbjct: 172 DSMK-ERDLVSWNAMI 186
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 202/392 (51%), Gaps = 41/392 (10%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-------------------- 44
RV +P +++ W M+ GL++ G A VF +M +
Sbjct: 301 RVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Query: 45 -------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
D + +I YAK G + + +F++ +RD W+ +IS
Sbjct: 361 SFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIIS 420
Query: 86 GYAQNGLPNEALKIFQGMELMNVKP-DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
GYAQN +AL +F+ M+ V+ D + +VSL+ ACS G L + K + C + +S I
Sbjct: 421 GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIR 480
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V AL+DM +KCG ++ A + F+ + +D+ S+ +I G HG + A+ ++++
Sbjct: 481 PCSL-VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE 539
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
L+ G+ P++ F +L++CSH +V++G F +M + + P+ EH AC+VDLL R+
Sbjct: 540 FLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAK 599
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSS 324
++++A++ K G +L AC+ G+ E+ +I+ + EL+P ++ YV L
Sbjct: 600 RIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGH 659
Query: 325 IYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+AA +W DVS N+M+ GL+KLPG S I
Sbjct: 660 SFAAMKRWDDVSESWNQMRSLGLKKLPGWSKI 691
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 37/261 (14%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------- 42
+A++VF +M ER++ W AM+G + G + A + ++M
Sbjct: 99 HARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVL 158
Query: 43 -----------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
+ D+ M++ Y K + A+ LFD+ +RD W+ +IS
Sbjct: 159 EITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GYA G +E LK+ M ++PD+ + +S + +L++ + + C + ++ D+
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM 205
H+ ALI M KCG + + ++ E +P +D+ + MI GL G AE+A+ +F++M
Sbjct: 279 -DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM 337
Query: 206 LNEGLIPDNAAFTVILTACSH 226
L G + A ++ +C+
Sbjct: 338 LQSGSDLSSEAIASVVASCAQ 358
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 175/390 (44%), Gaps = 59/390 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PER----------- 44
+AK +F QM +R++ SWN M+ G G++ K+ M P++
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG 256
Query: 45 ----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
D+ T +I Y K G ++ + + P +D W+V
Sbjct: 257 TMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTV 316
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISG + G +AL +F M + S++++C+Q+G+ DL V Y+ +
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG 376
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ T + +LI M AKCG++D++ +FE M +RDL S+ ++I G + + +A+ LF
Sbjct: 377 YTL-DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 203 NKMLNEGLIPDNAAFTVI--LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
+M + +FTV+ L ACS + GK + + + P +VD+
Sbjct: 436 EEM-KFKTVQQVDSFTVVSLLQACSSAGALPVGK-LIHCIVIRSFIRPCSLVDTALVDMY 493
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG-EIVANRLFE-LEPENSSP 318
S+ G L+ A S+ + S WG L+ F+G+ ++ EI + L +EP +
Sbjct: 494 SKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIF 552
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
+LSS SH N M ++GL+
Sbjct: 553 LAVLSS----------CSH--NGMVQQGLK 570
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 136/287 (47%), Gaps = 22/287 (7%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+++ YAK G +A AR +F++ +RD W+ +I Y++ G+ EA + M +KP
Sbjct: 87 LVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 112 EYIMVSLMSACSQVGNL----DLA--KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
++ ++S ++ L D A DC DI V+ +++++ KC ++
Sbjct: 147 PVTLLEMLSGVLEITQLQCLHDFAVIYGFDC-------DIA---VMNSMLNLYCKCDHVG 196
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
A LF++M +RD+ S+ +MI G + G + + L +M +GL PD F L+
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG 256
Query: 226 HGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
+E G+ + + +K+ + + ++ + + G+ + +Y +L+++P
Sbjct: 257 TMCDLEMGRMLHCQIVKTGFDV--DMHLKTALITMYLKCGKEEASYRVLETIP-NKDVVC 313
Query: 285 WGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQ 331
W ++ G E IV + + + + SS + +S+ A+ Q
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAI--ASVVASCAQ 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+ + +G + L F M + PD + SL+ AC+ + L + + +
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
++ ++L+++ AK G + A K+FEEM +RD+ + +MI S G +A L N
Sbjct: 78 S-SDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVN 136
Query: 204 KMLNEGLIP 212
+M +G+ P
Sbjct: 137 EMRFQGIKP 145
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 201/414 (48%), Gaps = 62/414 (14%)
Query: 3 AKRVFVQMPERNLTSWNAMV-------------------------------GGLVK---G 28
A RVF +M R+ SWNA++ G ++K G
Sbjct: 394 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG 453
Query: 29 GDL-----INARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRD------- 76
G L I++ V M V + +ID Y+K G I A + + +R
Sbjct: 454 GSLGYGMEIHSSIVKSGMASNSSVGCS-LIDMYSKCGMIEEAEKIHSRFFQRANVSGTME 512
Query: 77 -------------AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
W+ +ISGY +A +F M M + PD++ +++ C+
Sbjct: 513 ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 572
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYC 183
+ + L K + + + + ++ + L+DM +KCG++ + +FE+ +RD ++
Sbjct: 573 NLASAGLGKQIHAQVIKKELQ-SDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWN 631
Query: 184 SMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
+MI G + HG E+A+ LF +M+ E + P++ F IL AC+H L+++G YF MK
Sbjct: 632 AMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRD 691
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFY-GEVELGE 302
Y + P HY+ MVD+L +SG++K A EL++ MP E+ W LLG C + VE+ E
Sbjct: 692 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 751
Query: 303 IVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
L L+P++SS Y LLS++YA A W VS ++ M+ L+K PGCSW+
Sbjct: 752 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 46/330 (13%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------------------- 42
A F MP R++ SWN+M+ G ++ G+ + + +VF DM
Sbjct: 91 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 150
Query: 43 -------------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+ DVV+ + ++D YAK + +F P++++ WS +
Sbjct: 151 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 210
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+G QN L + ALK F+ M+ +N + I S++ +C+ + L L + + +S
Sbjct: 211 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS-- 268
Query: 144 DIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
D +V A +DM AKC NM A LF+ + SY +MI G S + +A+ LF
Sbjct: 269 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 328
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEG-KHYFETMKSKYSMVPSPEHYACMVDLLS 261
+++++ GL D + + + AC+ + + EG + Y +KS S+ + A +D+
Sbjct: 329 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYG 386
Query: 262 RSGQLKEAYELLKSMPVESHASAWGALLGA 291
+ L EA+ + M A +W A++ A
Sbjct: 387 KCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 5/209 (2%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ D ++A VFD MP RDVVS+ MI+GY+K D+ A + F+ P RD
Sbjct: 45 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 104
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ ++SGY QNG +++++F M ++ D ++ CS + + L + +
Sbjct: 105 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 164
Query: 139 SQSSIDIGQTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
+ D T VVA AL+DM AK + ++F+ +P+++ S+ ++I G +
Sbjct: 165 VRVGCD---TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 221
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACS 225
A+ F +M + + +L +C+
Sbjct: 222 LALKFFKEMQKVNAGVSQSIYASVLRSCA 250
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 138/308 (44%), Gaps = 34/308 (11%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV ID Y K +A A +FD+ +RDA W+ +I+ + QNG E L +F M
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 433
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
++PDE+ S++ AC+ G+L + + +S + + V +LIDM +KCG +
Sbjct: 434 RSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGM-ASNSSVGCSLIDMYSKCGMI 491
Query: 165 DRANKL----------------FEEMPKRDLFSYC----SMIQGLSIHGYAEQAVGLFNK 204
+ A K+ E+M + L C S+I G + +E A LF +
Sbjct: 492 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 551
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYAC--MVDLLSR 262
M+ G+ PD + +L C++ GK + K + Y C +VD+ S+
Sbjct: 552 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYSK 608
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE-LEPENSSP-YV 320
G L ++ L+ + W A++ +G+ E A +LFE + EN P +V
Sbjct: 609 CGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGE----EAIQLFERMILENIKPNHV 663
Query: 321 LLSSIYAA 328
SI A
Sbjct: 664 TFISILRA 671
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 173/307 (56%), Gaps = 5/307 (1%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I+ Y K G + A+ +FD ++ FL + ++ Y Q+ EAL +F M+ V P+
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDRANK 169
EY L+++ +++ L + + +S + HV+ AL++M AK G+++ A K
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGY---RNHVMVGNALVNMYAKSGSIEDARK 394
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
F M RD+ ++ +MI G S HG +A+ F++M+ G IP+ F +L ACSH
Sbjct: 395 AFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGF 454
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
VE+G HYF + K+ + P +HY C+V LLS++G K+A + +++ P+E AW LL
Sbjct: 455 VEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Query: 290 GACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRK 349
AC LG+ VA E P +S YVLLS+I+A + +W V+ V++ M RG++K
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKK 574
Query: 350 LPGCSWI 356
PG SWI
Sbjct: 575 EPGVSWI 581
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 29 GDLINARKVFDDMPER--DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
G+ I+A + + R D +I+ Y K + AR LFD P+R+ W ++ G
Sbjct: 50 GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKG 109
Query: 87 YAQNGLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNLDLAK-WVDCYLSQSSID 144
Y +G E LK+F+ M +P+E++ + +CS G ++ K + C+L
Sbjct: 110 YQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGL-- 167
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
I V L+ M + C A ++ +++P DL + S + G G ++ + + K
Sbjct: 168 ISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRK 227
Query: 205 MLNEGLIPDNAAFTVILTACSHGR 228
NE + +N + L S+ R
Sbjct: 228 TANEDFVWNNLTYLSSLRLFSNLR 251
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Query: 118 LMSACSQVGNLDLAKWVDCYL--SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
L+ C+ L + + + +L + S + + +LI++ KC RA KLF+ MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG-LIPDNAAFTVILTACSHGRLVEEGK 234
+R++ S+C+M++G G+ + + LF M G P+ TV+ +CS+ +EEGK
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 235 HYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
F KY ++ +V + S EA +L +P
Sbjct: 157 Q-FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP 198
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 208/399 (52%), Gaps = 48/399 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-------------- 46
D+A RVF + RN+ SWN+++ G V A ++F M + V
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 47 -------------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
V+ + +ID Y + A + D +D S
Sbjct: 339 KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS 398
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISG A G +EA+ IF M P+ ++SL++ACS +L +KW +
Sbjct: 399 TMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRR 455
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
S+ I V +++D AKCG ++ A + F+++ ++++ S+ +I +I+G ++A+ L
Sbjct: 456 SLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALAL 515
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F++M +G P+ + L+AC+HG LV++G F++M + PS +HY+C+VD+LS
Sbjct: 516 FDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLS 574
Query: 262 RSGQLKEAYELLKSMP--VESHASAWGALLGAC--KFYGEVELGEIVANRLFELEPENSS 317
R+G++ A EL+K++P V++ ASAWGA+L C +F + E+VA L ELEP SS
Sbjct: 575 RAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL-ELEPLCSS 633
Query: 318 PYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
Y+L SS +AA W DV+ ++ +KER +R + G S +
Sbjct: 634 GYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLM 119
D SAR LFD+ +RD WSV+I Y Q+ P LK+F+ M +PD + S++
Sbjct: 174 DSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL 179
AC+ + ++D+ + V + + D+ V +LIDM +K ++D A ++F+E R++
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGR 228
S+ S++ G + ++A+ +F+ M+ E + D +L C HG
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 229 LVEEG 233
++ G
Sbjct: 354 IIRRG 358
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 45/265 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-----PERDVVSFTV----- 51
+A+++F +M ER++ SW+ ++ V+ + + K+F +M E D V+ T
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 52 -------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLW 80
+ID Y+K D+ SA +FD+ R+ W
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +++G+ N +EAL++F M V+ DE +VSL+ C K + + +
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+ + +++LID C +D A + + M +D+ S +MI GL+ G +++A+
Sbjct: 357 RGYESNEV-ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 201 LFNKMLNEGLIPDNAAFTVILTACS 225
+F M + P+ +L ACS
Sbjct: 416 IFCHMRD---TPNAITVISLLNACS 437
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 24/247 (9%)
Query: 54 DGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
D Y K GD+ S FD RD+ W+V++ G G E L F + + +P+
Sbjct: 69 DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTS 128
Query: 114 IMVSLMSACSQVGNLDLAKWVD-----CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
+V ++ AC + W D Y+ +S G + V +++ M A ++ A
Sbjct: 129 TLVLVIHACRSL-------WFDGEKIHGYVIRSGF-CGISSVQNSILCMYADSDSLS-AR 179
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTACSHG 227
KLF+EM +RD+ S+ +I+ + LF +M++E PD T +L AC+
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 228 RLVEEGK--HYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHAS 283
++ G+ H F +++ + + + + C ++D+ S+ + A+ + + S
Sbjct: 240 EDIDVGRSVHGF-SIRRGFDL---ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVS 295
Query: 284 AWGALLG 290
W ++L
Sbjct: 296 -WNSILA 301
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 189/331 (57%), Gaps = 6/331 (1%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
GDL ++RK+FDD+ VV+ ++D + G++ A F + P D W+ +I+G++
Sbjct: 135 GDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFS 194
Query: 89 QNGLPNEALKIFQGM---ELMNVKPDEYIMVSLMSACSQV--GNLDLAKWVDCYLSQSSI 143
+ GL +AL +F M E + P+E VS++S+C+ G + L K + Y+ I
Sbjct: 195 KKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEI 254
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
I T + AL+DM K G+++ A +F+++ + + ++ ++I L+ +G +QA+ +F
Sbjct: 255 -ILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFE 313
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
M + + P+ ILTAC+ +LV+ G F ++ S+Y ++P+ EHY C+VDL+ R+
Sbjct: 314 MMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRA 373
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G L +A ++S+P E AS GALLGACK + ELG V +L L+P++ YV LS
Sbjct: 374 GLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALS 433
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
+ A W + ++ M E G+RK+P S
Sbjct: 434 TFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 188/359 (52%), Gaps = 35/359 (9%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D AK++FV++P+R++ SWN+++ G+V+ GD++ A K+FD+MP+++++S+ +MI Y
Sbjct: 170 DLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGAN 229
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+ P ++ +F+ M + +E +V L++
Sbjct: 230 N-------------------------------PGVSISLFREMVRAGFQGNESTLVLLLN 258
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF 180
AC + L + V L ++ ++ + ALIDM KC + A ++F+ + R+
Sbjct: 259 ACGRSARLKEGRSVHASLIRTFLN-SSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
++ MI +HG E + LF M+N L PD F +L C+ LV +G+ Y+ M
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP---VESHASAWGALLGACKFYGE 297
++ + P+ H CM +L S +G +EA E LK++P V ++ W LL + +F G
Sbjct: 378 VDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
Query: 298 VELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LGE +A L E +P N Y LL +IY+ +W DV+ V+ +KER + ++PGC +
Sbjct: 438 PTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLV 496
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 48 SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
S+TV I Y +G + A +F Y + P +AL + +
Sbjct: 71 SYTVSI--YRSIGKLYCANPVFK---------------AYLVSSSPKQALGFYFDILRFG 113
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA---ALIDMNAKCGNM 164
PD Y VSL+S + +D K C+ +I G V+ +L+ M CG +
Sbjct: 114 FVPDSYTFVSLISCIEKTCCVDSGKM--CH--GQAIKHGCDQVLPVQNSLMHMYTCCGAL 169
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D A KLF E+PKRD+ S+ S+I G+ +G A LF++M ++ +I N + L A
Sbjct: 170 DLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGAN 229
Query: 225 SHG 227
+ G
Sbjct: 230 NPG 232
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 194/396 (48%), Gaps = 76/396 (19%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD--VVSFTV------- 51
++A+ + M ++ SWN+M+ G V+ G + A +F M ERD + FT+
Sbjct: 279 ESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCF 338
Query: 52 -------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLW 80
++D YAK G + SA +F+ ++D W
Sbjct: 339 ALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISW 398
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ L++G NG +EALK+F M + + PD+ + S++SA +++ L+ + V +
Sbjct: 399 TALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIK 458
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S V +L+ M KCG+++ AN +F M RDL ++ +I G + +G
Sbjct: 459 SGFP-SSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG------- 510
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
L+E+ + YF++M++ Y + P PEHYACM+DL
Sbjct: 511 ----------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLF 542
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
RSG + +LL M VE A+ W A+L A + +G +E GE A L ELEP N+ PYV
Sbjct: 543 GRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYV 602
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
LS++Y+AA + + ++V+ MK R + K PGCSW+
Sbjct: 603 QLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWV 638
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 146/283 (51%), Gaps = 6/283 (2%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
+R N ++G L K G + AR++FD MPERD ++ MI Y+ ++ A LF
Sbjct: 25 DRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
P ++ W+ LISGY ++G EA +F M+ +KP+EY + S++ C+ + L
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLS 190
+ + + ++ D+ +VV L+ M A+C + A LFE M +++ ++ SM+ G S
Sbjct: 145 EQIHGHTIKTGFDL-DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 191 IHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPS 249
+G+A +A+ F + EG + F +LTAC+ G + +KS +
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
+ + ++D+ ++ +++ A LL+ M V+ S W +++ C
Sbjct: 264 VQ--SALIDMYAKCREMESARALLEGMEVDDVVS-WNSMIVGC 303
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 157/362 (43%), Gaps = 62/362 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE--------------RDVV 47
+A+++F P +N SWNA++ G K G + A +F +M R
Sbjct: 77 DAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCT 136
Query: 48 SFTVMIDG-------------------------YAKVGDIASARALFDKAP-KRDAFLWS 81
S +++ G YA+ I+ A LF+ +++ W+
Sbjct: 137 SLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWT 196
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+++GY+QNG +A++ F+ + + ++Y S+++AC+ V + V C + +S
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+V +ALIDM AKC M+ A L E M D+ S+ SMI G G +A+ +
Sbjct: 257 GFKT-NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSM 315
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRL---VEEGKHYF--ETMKSKYSMVPSPEHYACM 256
F +M + D+ IL + R + H +T + Y +V + +
Sbjct: 316 FGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA-----L 370
Query: 257 VDLLSRSGQLKEAYELLKSMPVESHASAWGALLG----------ACKFYGEVELGEIVAN 306
VD+ ++ G + A ++ + M +E +W AL+ A K + + +G I +
Sbjct: 371 VDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 307 RL 308
++
Sbjct: 430 KI 431
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 128/243 (52%), Gaps = 8/243 (3%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ +ID YAK ++ SARAL + D W+ +I G + GL EAL +F M ++K
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 110 PDEYIMVSLMS--ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
D++ + S+++ A S+ + +A C + ++ + V AL+DM AK G MD A
Sbjct: 326 IDDFTIPSILNCFALSRT-EMKIASSAHCLIVKTGYATYKL-VNNALVDMYAKRGIMDSA 383
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
K+FE M ++D+ S+ +++ G + +G ++A+ LF M G+ PD +L+A +
Sbjct: 384 LKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAEL 443
Query: 228 RLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWG 286
L+E G+ + +KS + S + +V + ++ G L++A + SM + + W
Sbjct: 444 TLLEFGQQVHGNYIKSGFPSSLSVNN--SLVTMYTKCGSLEDANVIFNSMEIRDLIT-WT 500
Query: 287 ALL 289
L+
Sbjct: 501 CLI 503
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 175/314 (55%), Gaps = 2/314 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D + ++++D +A VG+I A LF + P +D +S LI G ++G + A +F+
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
+ + + D++I+ +++ CS + +L K + + + + AL+DM KCG
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYE-SEPVTATALVDMYVKCG 492
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+D LF+ M +RD+ S+ +I G +G E+A F+KM+N G+ P+ F +L+
Sbjct: 493 EIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLS 552
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
AC H L+EE + ETMKS+Y + P EHY C+VDLL ++G +EA EL+ MP+E
Sbjct: 553 ACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDK 612
Query: 283 SAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKM 342
+ W +LL AC + L ++A +L + P++ S Y LS+ YA W +S V+
Sbjct: 613 TIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAA 672
Query: 343 KERGLRKLPGCSWI 356
K+ G ++ G SWI
Sbjct: 673 KKLGAKE-SGMSWI 685
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 135/296 (45%), Gaps = 36/296 (12%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
K G+ I A + + + ++ V I Y ++ A +FD+ +R+ W+ ++SG
Sbjct: 22 KRGESIQAHVIKQGISQNVFIANNV-ISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSG 80
Query: 87 YAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
Y +G PN+A+++++ M + +E++ +++ AC VG++ L V + + ++
Sbjct: 81 YTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLR- 139
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN-- 203
G ++ +++DM K G + AN F+E+ + S+ ++I G G ++AV LF+
Sbjct: 140 GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
Query: 204 ----------------------------KMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+M EGL+ D A L ACS G L+ GK
Sbjct: 200 PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL--KSMPVESHASAWGALL 289
K + SP + ++D+ S G L A ++ + + V S + W ++L
Sbjct: 260 -LHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 14/282 (4%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N++V VK G LI A F ++ S+ +I GY K G + A LF + P+ +
Sbjct: 146 NSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVV 205
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ LISG+ G P AL+ M+ + D + + + ACS G L + K + C +
Sbjct: 206 SWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCV 264
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE---MPKRDLFSYCSMIQGLSIHGYA 195
+S ++ ++ALIDM + CG++ A +F + + + SM+ G I+
Sbjct: 265 VKSGLE-SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 196 EQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE-TMKSKYSMVPSPEHY- 253
E A+ L ++ L D+ + L C + + G + S Y + Y
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL-----DYI 378
Query: 254 --ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
+ +VDL + G +++A++L +P + + G + G K
Sbjct: 379 VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 189/330 (57%), Gaps = 11/330 (3%)
Query: 33 NARKVFDDMPE-RDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGY 87
+A VF ++ + R+++S+ +I G G +A LF+K K D+ W+ LISG+
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF 343
Query: 88 AQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQ 147
+Q G EA K F+ M + + P + SL+SACS + L K + ++ +++ +
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE-RD 402
Query: 148 THVVAALIDMNAKCGNMDRANKLF---EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V+ +LIDM KCG A ++F E PK +F + MI G HG E A+ +F
Sbjct: 403 IFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVF-WNVMISGYGKHGECESAIEIFEL 461
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
+ E + P A FT +L+ACSH VE+G F M+ +Y PS EH CM+DLL RSG
Sbjct: 462 LREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSG 521
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSS 324
+L+EA E++ M S + +LLG+C+ + + LGE A +L ELEPEN +P+V+LSS
Sbjct: 522 RLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSS 580
Query: 325 IYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
IYAA ++W DV ++ + ++ L KLPG S
Sbjct: 581 IYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 45/299 (15%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP------------------- 42
+A +V +MPER + S NA V GL++ G +A ++F D
Sbjct: 84 DALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG 143
Query: 43 -----------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
E +V T ++ Y++ G+ A +F+K P + ++ IS
Sbjct: 144 DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 86 GYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
G +NG+ N +F M + + +P++ V+ ++AC+ + NL + + + +
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+T V ALIDM +KC A +F E+ R+L S+ S+I G+ I+G E AV LF
Sbjct: 264 F-ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 204 KMLNEGLIPDNAAFTVILTACSH-GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
K+ +EGL PD+A + +++ S G+++E K +FE M S MVPS C+ LLS
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFK-FFERMLS-VVMVPS---LKCLTSLLS 376
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 35/321 (10%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
N ++ ++ K GD++ R + + + DV + T ++ Y KV + A +
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 70 DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
D+ P+R + +SG +NG +A ++F + + + S++ C G+++
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIE 146
Query: 130 LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGL 189
+ C +S ++ + +V +L+ M ++CG A ++FE++P + + +Y + I GL
Sbjct: 147 GGMQLHCLAMKSGFEM-EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 190 SIHGYAEQAVGLFNKMLN-EGLIPDNAAFTVILTACS------HGR----LVEEGKHYFE 238
+G +FN M P++ F +TAC+ +GR LV + + FE
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEV 298
TM ++D+ S+ K AY + + + +W +++ G+
Sbjct: 266 TMVG-----------TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQH 314
Query: 299 ELGEIVANRLFE-LEPENSSP 318
E A LFE L+ E P
Sbjct: 315 E----TAVELFEKLDSEGLKP 331
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 174/306 (56%), Gaps = 2/306 (0%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKP 110
+I Y+K D+ + LF++ + W+ +ISG Q+G + A ++F M L + P
Sbjct: 278 LITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLP 337
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
D + SL++ CSQ+ L+L K + Y +++ + + V ALIDM AKCGN +A +
Sbjct: 338 DAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE-NENFVCTALIDMYAKCGNEVQAESV 396
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F+ + ++ SMI G S+ G +A+ + +M +GL PD F +L+AC+HG V
Sbjct: 397 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 456
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
+EGK F M ++ + P+ +HYA MV LL R+ EA L+ M ++ ++ WGALL
Sbjct: 457 DEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLS 516
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKL 350
AC + E+E+GE VA ++F L+ +N YVL+S++YA W DV V+N MK+ G
Sbjct: 517 ACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGY 576
Query: 351 PGCSWI 356
G S I
Sbjct: 577 LGVSQI 582
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P+RD +W+ LI GY++NG +A K+F M P +V+L+ C Q G + +
Sbjct: 2 PERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 61
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
V ++S +++ + V ALI +KC + A LF EM + S+ +MI S
Sbjct: 62 SVHGVAAKSGLEL-DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 120
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH 252
G E+A+ +F M + + +L+A + E H + K MV
Sbjct: 121 GLQEEAITVFKNMFEKNVEISPVTIINLLSA----HVSHEPLH---CLVVKCGMVNDISV 173
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVES 280
+V SR G L A L S +S
Sbjct: 174 VTSLVCAYSRCGCLVSAERLYASAKQDS 201
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 46/263 (17%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----------DVVSFT--------- 50
MPER+ WNA++ G + G +A K+F M ++ +++ F
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 51 --------------------VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
+I Y+K ++ SA LF + + W+ +I Y+Q+
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 120
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV 150
GL EA+ +F+ M NV+ +++L+SA V + L C + + + + V
Sbjct: 121 GLQEEAITVFKNMFEKNVEISPVTIINLLSA--HVSHEPL----HCLVVKCGM-VNDISV 173
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
V +L+ ++CG + A +L+ + + S++ + G + AV F+K +
Sbjct: 174 VTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCM 233
Query: 211 IPDNAAFTVILTACSHGRLVEEG 233
D A IL C ++ G
Sbjct: 234 KIDAVALVGILHGCKKSSHIDIG 256
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 40/167 (23%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-------PERDVVS---------- 48
+F Q+ E L SWN+++ G V+ G A +VF M P+ ++
Sbjct: 294 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 353
Query: 49 -----------------------FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
T +ID YAK G+ A ++F W+ +IS
Sbjct: 354 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 413
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
GY+ +GL + AL + M +KPDE + ++SAC+ G +D K
Sbjct: 414 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 460
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 205/369 (55%), Gaps = 18/369 (4%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGY 56
++A++VF + +++ +WN+M+ G + G A ++F M + + ++++ MI GY
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 57 AKVGDIASARALFDKAPK-----RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
K GD A LF + K R+ W+++I+GY QNG +EAL++F+ M+ P+
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA-ALIDMNAKCGNMDRANKL 170
++SL+ AC+ + + + + + + ++D H V AL D AK G+++ + +
Sbjct: 524 SVTILSLLPACANLLGAKMVREIHGCVLRRNLD--AIHAVKNALTDTYAKSGDIEYSRTI 581
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL- 229
F M +D+ ++ S+I G +HG A+ LFN+M +G+ P+ + I+ A HG +
Sbjct: 582 FLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA--HGLMG 639
Query: 230 -VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
V+EGK F ++ + Y ++P+ EH + MV L R+ +L+EA + ++ M ++S W +
Sbjct: 640 NVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
Query: 289 LGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
L C+ +G++++ A LF LEPEN++ ++S IYA + L S NK + L
Sbjct: 700 LTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAK-LGRSLEGNKPRRDNLL 758
Query: 349 KLP-GCSWI 356
K P G SWI
Sbjct: 759 KKPLGQSWI 767
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 140/284 (49%), Gaps = 9/284 (3%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
D A + F +M ER++ +WN+++ + G A ++ +M + + V++ ++I GY
Sbjct: 233 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 57 AKVGDIASARALFDKAPK----RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
++G +A L K D F W+ +ISG NG+ +AL +F+ M L V P+
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
++S +SACS + ++ V + I V +L+DM +KCG ++ A K+F+
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 173 EMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
+ +D++++ SMI G GY +A LF +M + L P+ + +++ E
Sbjct: 412 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 233 GKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
F+ M+ + + + ++ ++G+ EA EL + M
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 125/256 (48%), Gaps = 10/256 (3%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
G + G +++AR F E DV T ++ YAK G IA AR +FD +R+ F WS +
Sbjct: 95 GSIHLGRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAM 152
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I Y++ E K+F+ M V PD+++ ++ C+ G+++ K + + I
Sbjct: 153 IGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV----I 208
Query: 144 DIGQT---HVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
+G + V +++ + AKCG +D A K F M +RD+ ++ S++ +G E+AV
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVE 268
Query: 201 LFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
L +M EG+ P + +++ + + + M++ + + + M+ L
Sbjct: 269 LVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGL 327
Query: 261 SRSGQLKEAYELLKSM 276
+G +A ++ + M
Sbjct: 328 IHNGMRYQALDMFRKM 343
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 133/332 (40%), Gaps = 74/332 (22%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS----FTVMIDG-- 55
+A++VF M ERNL +W+AM+G + K+F M + V+ F ++ G
Sbjct: 133 DARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCA 192
Query: 56 ---------------------------------YAKVGDIASARALFDKAPKRDAFLWSV 82
YAK G++ A F + +RD W+
Sbjct: 193 NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
++ Y QNG EA+++ + ME + P L+ +Q+G D A
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA----------- 301
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
MD K+ D+F++ +MI GL +G QA+ +F
Sbjct: 302 ---------------------MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
KM G++P+ ++ACS +++ +G ++ K + +VD+ S+
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE-VHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 263 SGQLKEAYELLKSMPVESHASAWGALL-GACK 293
G+L++A ++ S+ W +++ G C+
Sbjct: 400 CGKLEDARKVFDSVK-NKDVYTWNSMITGYCQ 430
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 175/312 (56%), Gaps = 7/312 (2%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
DV +I Y + AR +FD+ +R+ W+ +++ +NG N + F M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
PDE MV L+SAC GNL L K V + +++ + AL+DM AK G +
Sbjct: 207 GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELEL-NCRLGTALVDMYAKSGGL 263
Query: 165 DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTA 223
+ A +FE M ++++++ +MI GL+ +G+AE+A+ LF+KM+ E + P+ F +L A
Sbjct: 264 EYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
CSH LV++G YF M+ + + P HY MVD+L R+G+L EAY+ +K MP E A
Sbjct: 324 CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 284 AWGALLGACKFYGEVE---LGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKN 340
W LL AC + + + +GE V RL ELEP+ S V++++ +A A W + + V+
Sbjct: 384 VWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRR 443
Query: 341 KMKERGLRKLPG 352
MKE ++K+ G
Sbjct: 444 VMKETKMKKIAG 455
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
++S V + + D+A AR L + W++L GY+ + P E++ ++ M+
Sbjct: 47 IISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKR 106
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
+KP++ L+ AC+ L + + + + D +V LI + C
Sbjct: 107 RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF-DVYVGNNLIHLYGTCKKTS 165
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC- 224
A K+F+EM +R++ S+ S++ L +G F +M+ + PD V+L+AC
Sbjct: 166 DARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
Query: 225 ---SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
S G+LV + M + + + +VD+ ++SG L+ A + + M V+ +
Sbjct: 226 GNLSLGKLVHS-----QVMVRELEL--NCRLGTALVDMYAKSGGLEYARLVFERM-VDKN 277
Query: 282 ASAWGALLGACKFYGEVE 299
W A++ YG E
Sbjct: 278 VWTWSAMIVGLAQYGFAE 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 41/231 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSF------ 49
+A++VF +M ERN+ SWN+++ LV+ G L + F +M P+ +
Sbjct: 166 DARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
Query: 50 -------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
T ++D YAK G + AR +F++ ++ + WS +I
Sbjct: 226 GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMI 285
Query: 85 SGYAQNGLPNEALKIF-QGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSS 142
G AQ G EAL++F + M+ +V+P+ + ++ ACS G +D K+
Sbjct: 286 VGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHK 345
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIH 192
I H A++D+ + G ++ A ++MP + D + +++ SIH
Sbjct: 346 IKPMMIH-YGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 196/363 (53%), Gaps = 8/363 (2%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYA 57
+AK+VF E++L WN ++ + G A ++F M +V+++ ++I
Sbjct: 428 DAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL 487
Query: 58 KVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
+ G + A+ +F + + W+ +++G QNG EA+ + M+ ++P+ +
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
+ +SAC+ + +L + + + Y+ ++ + +L+DM AKCG++++A K+F
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
+L +MI +++G ++A+ L+ + GL PDN T +L+AC+H + +
Sbjct: 608 KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
Query: 234 KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACK 293
F + SK SM P EHY MVDLL+ +G+ ++A L++ MP + A +L+ +C
Sbjct: 668 IEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCN 727
Query: 294 FYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGC 353
+ EL + ++ +L E EPENS YV +S+ YA W +V ++ MK +GL+K PGC
Sbjct: 728 KQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGC 787
Query: 354 SWI 356
SWI
Sbjct: 788 SWI 790
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 169/346 (48%), Gaps = 44/346 (12%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVSF----- 49
D+A +VF ++P+RN +WNA++ G V+ G A ++F DM P R VS
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 50 ----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
T +++ Y KVG I A +FD+ ++D W+
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
++ISGY Q GL +A+ + Q M L +K D + +LMSA ++ NL L K V CY +
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
S + + + ++DM AKCG++ A K+F+ ++DL + +++ + G + +A+ L
Sbjct: 405 SFE-SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRL 463
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
F M EG+ P+ + +I+ + V+E K F M+S ++P+ + M++ +
Sbjct: 464 FYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMV 522
Query: 262 RSGQLKEAYELLKSMP---VESHASAWGALLGACKFYGEVELGEIV 304
++G +EA L+ M + +A + L AC + +G +
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 11/224 (4%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK 71
ER+L++ + ++K GD AR ++ E +V F YAK + A LF K
Sbjct: 83 ERDLSTGKQIHARILKNGDFY-AR---NEYIETKLVIF------YAKCDALEIAEVLFSK 132
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
R+ F W+ +I + GL AL F M + PD +++ ++ AC +
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
+ V Y+ +S ++ V ++L DM KCG +D A+K+F+E+P R+ ++ +++ G
Sbjct: 193 RGVHGYVVKSGLE-DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+G E+A+ LF+ M +G+ P + L+A ++ VEEGK
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 25/218 (11%)
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC-YLSQSS 142
+S +NG EAL + M+ N++ I ++ C +L K + L
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
++ L+ AKC ++ A LF ++ R++FS+ ++I G E A+ F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 203 NKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYSMVPSPE 251
+ML + PDN + AC HG +V+ G + S
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS-------- 213
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+ D+ + G L +A ++ +P + +A AW AL+
Sbjct: 214 ----LADMYGKCGVLDDASKVFDEIP-DRNAVAWNALM 246
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 172/307 (56%), Gaps = 1/307 (0%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ ++D Y+K G I A +F+ + D +V++ G AQNG EA++ F M V+
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
D ++ +++ +L L K + + + G T V LI+M +KCG++ +
Sbjct: 355 IDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS-GNTFVNNGLINMYSKCGDLTDSQT 413
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F MPKR+ S+ SMI + HG+ A+ L+ +M + P + F +L ACSH L
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+++G+ MK + + P EHY C++D+L R+G LKEA + S+P++ W ALL
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
Query: 290 GACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRK 349
GAC F+G+ E+GE A +LF+ P++SS ++L+++IY++ +W + + +MK G+ K
Sbjct: 534 GACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTK 593
Query: 350 LPGCSWI 356
G S I
Sbjct: 594 ETGISSI 600
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y K G S R +FD R+ + +ISG +N L + L++F M V P+
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+S ++ACS + + + L + I+ + + +AL+DM +KCG+++ A +F
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIE-SELCIESALMDMYSKCGSIEDAWTIF 314
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVE 231
E + D S ++ GL+ +G E+A+ F +ML G+ D + +L +
Sbjct: 315 ESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLG 374
Query: 232 EGKHYFE-TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
GK +K K+S + ++++ S+ G L ++ + + MP ++ S W +++
Sbjct: 375 LGKQLHSLVIKRKFSGNTFVNN--GLINMYSKCGDLTDSQTVFRRMPKRNYVS-WNSMIA 431
Query: 291 ACKFYGE 297
A +G
Sbjct: 432 AFARHGH 438
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYA 57
+++ VF +MP+RN SWN+M+ + G + A K++++M +V V+F ++ +
Sbjct: 410 DSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACS 469
Query: 58 KVGDIASARALFDK-------APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
VG I R L ++ P+ + + + +I + GL EA + L KP
Sbjct: 470 HVGLIDKGRELLNEMKEVHGIEPRTEHY--TCIIDMLGRAGLLKEAKSFIDSLPL---KP 524
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALI 155
D I +L+ ACS G+ ++ ++ L Q++ D H++ A I
Sbjct: 525 DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANI 569
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 5/252 (1%)
Query: 40 DMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKI 99
D+ +V + ++ YAK G + A LFD+ P RD +++ G+ +N +
Sbjct: 84 DIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVL 143
Query: 100 FQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA 159
+ M L + D + ++S C + K + S D + V LI
Sbjct: 144 LKRM-LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYD-KEISVGNKLITSYF 201
Query: 160 KCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFT 218
KCG +F+ M R++ + ++I GL + E + LF+ ++ GL+ P++ +
Sbjct: 202 KCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFS-LMRRGLVHPNSVTYL 260
Query: 219 VILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPV 278
L ACS + + EG+ + KY + + ++D+ S+ G +++A+ + +S
Sbjct: 261 SALAACSGSQRIVEGQQ-IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTE 319
Query: 279 ESHASAWGALLG 290
S L+G
Sbjct: 320 VDEVSMTVILVG 331
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 194/393 (49%), Gaps = 45/393 (11%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPE-----RDVVSF---------- 49
R+ R+LTSWN+++ G G + + + F M D+++
Sbjct: 535 RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL 594
Query: 50 -------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
+I Y + DI SA +F + W+ +I
Sbjct: 595 GLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVI 654
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
S +QN E ++F+ ++L +P+E V L+SA +Q+G+ C+L +
Sbjct: 655 SALSQNKAGREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQ 711
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V AAL+DM + CG ++ K+F + ++ S+I HG E+A+ LF +
Sbjct: 712 -ANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKE 770
Query: 205 ML-NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+ N + P+ ++F +L+ACSH ++EG Y++ M+ K+ + P EH +VD+L R+
Sbjct: 771 LSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRA 830
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G+L+EAYE + + A WGALL AC ++G+ +LG+ VA LFE+EP+N+S Y+ L+
Sbjct: 831 GKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLA 890
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+ Y W + ++ +++ L+KLPG S I
Sbjct: 891 NTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 140/340 (41%), Gaps = 64/340 (18%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDG-- 55
+A+ VF M R++ SWN ++ + G + + F M E D V+F+ +I
Sbjct: 241 SAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
Query: 56 -----------------------------------YAKVGDIASARALFDKAPKRDAFLW 80
Y+K GD +A +F++ RD
Sbjct: 301 SIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISS 360
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
+ +++G+A NG+ EA I M+ ++ ++PD +VS+ S C + + V Y
Sbjct: 361 NAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTV 420
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+ + V+ ++IDM KCG +A LF+ RDL S+ SMI S +G+ +A
Sbjct: 421 RMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAK 480
Query: 200 GLFNKMLNEGLIPDNAAFTV--ILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
LF ++++E + TV ILT+C + GK C
Sbjct: 481 NLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVH-----------------CW- 522
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGE 297
L + G L A+ L++M ++W +++ C G
Sbjct: 523 --LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 47/364 (12%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER--------------------- 44
+F ++ E+++ WN+M+ L + G I A +F +M +
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 45 ------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
D +++ YAK +++SA +F RD W+ +++
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263
Query: 87 YAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG 146
NG P ++L+ F+ M + D ++SACS + L L + + + +S
Sbjct: 264 CLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYS-P 322
Query: 147 QTHVVA--ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ HV ++I M +KCG+ + A +FEE+ RD+ S +++ G + +G E+A G+ N+
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 205 MLN-EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
M + + + PD A I + C EG+ + E ++D+ +
Sbjct: 383 MQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G +A ELL +W +++ A + + N E+ E S LS
Sbjct: 443 GLTTQA-ELLFKTTTHRDLVSWNSMISA---FSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 324 SIYA 327
++ A
Sbjct: 499 TVLA 502
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
+D+ + + ++ Y + G++ S+ LFD+ ++D +W+ +I+ QNG A+ +F M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
+ D ++ SA S + + C ++ + +G + + AL+++ AK N
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGL-VGDSSLCNALMNLYAKGEN 238
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ A +F M RD+ S+ +++ +G+ +++ F M G D F+ +++A
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 224 CS-----------HGRLVEEG 233
CS HG +++ G
Sbjct: 299 CSSIEELTLGESLHGLVIKSG 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 126/310 (40%), Gaps = 56/310 (18%)
Query: 27 KGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISG 86
+ G ++ V +M R + +ID Y K G A LF RD W+ +IS
Sbjct: 410 REGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISA 469
Query: 87 YAQNGLPNEALKIFQGM--ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
++QNG ++A +F+ + E K +++++++C +L K V C+L
Sbjct: 470 FSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ----- 524
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAVGLFN 203
K G++ A E M + RDL S+ S+I G + G+ +++ F
Sbjct: 525 ---------------KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQ 569
Query: 204 KMLNEGLIPDNAAFTVILTACSHGR--LVEEGKHY------------------------- 236
M EG I + T++ T + G LV +G+ +
Sbjct: 570 AMSREGKIRHD-LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGR 628
Query: 237 ---FETMKSKYSMVPSPE--HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
E+ + ++ P + C++ LS++ +E ++L +++ +E + + LL A
Sbjct: 629 CKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSA 688
Query: 292 CKFYGEVELG 301
G G
Sbjct: 689 STQLGSTSYG 698
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 200/393 (50%), Gaps = 42/393 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVG------------GLVK--GGD-------------LINAR 35
A+RVF + +R+L WNA+V GL+K G D L++A
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 36 KV----------FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
++ F + D+ T +++ YAK ++ AR F+ R+ W+ +I
Sbjct: 256 RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIV 315
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS-SID 144
G+AQNG EA+++F M L N++PDE S++S+C++ + K V +++ S D
Sbjct: 316 GFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSAD 375
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V +LI ++ GN+ A F + + DL S+ S+I L+ HG+AE+++ +F
Sbjct: 376 F--LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFES 433
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
ML + L PD F +L+ACSHG LV+EG F+ M Y + EHY C++DLL R+G
Sbjct: 434 MLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAG 492
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSS 324
+ EA ++L SMP E A A G C + + E + A +L E+EP Y +LS+
Sbjct: 493 FIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSN 552
Query: 325 IYAAADQWLDVSHVKNKMKERGLR-KLPGCSWI 356
Y + W + ++ + + K PGCSW+
Sbjct: 553 AYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 170/372 (45%), Gaps = 56/372 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLV-KGGDLIN---------ARKVFDDMPERDVVSF- 49
D+A ++F +MP RN+ +WN ++ G++ + GD + +R +F D+ D VSF
Sbjct: 88 DDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVS-LDHVSFM 146
Query: 50 ----------------------------------TVMIDGYAKVGDIASARALFDKAPKR 75
T ++ Y K G I AR +F+ R
Sbjct: 147 GLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR 206
Query: 76 DAFLWSVLISGYAQNGLPNEALKIFQ--GMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
D LW+ L+S Y NG+ +EA + + G + + D + SL+SAC ++ K
Sbjct: 207 DLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQ 262
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHG 193
+ L + S V AL++M AK ++ A + FE M R++ S+ +MI G + +G
Sbjct: 263 IHAILFKVSYQF-DIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY 253
+A+ LF +ML E L PD F +L++C+ + E K + M +K
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ-VQAMVTKKGSADFLSVA 380
Query: 254 ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG-EIVANRLFELE 312
++ SR+G L EA S+ E +W +++GA +G E ++ + L +L+
Sbjct: 381 NSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQ 439
Query: 313 PENSSPYVLLSS 324
P+ + +LS+
Sbjct: 440 PDKITFLEVLSA 451
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 137/306 (44%), Gaps = 21/306 (6%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQ-NGLPNEALKI----FQGMELM 106
++ Y K+ + A LFD+ P R+ W++LI G Q +G N + +
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT 136
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
+V D + L+ C+ N+ + C + + ++ +L+ KCG +
Sbjct: 137 DVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE-SSCFPSTSLVHFYGKCGLIVE 195
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG--LIPDNAAFTVILTAC 224
A ++FE + RDL + +++ ++G ++A GL M ++ D F+ +L+AC
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 225 SHGRLVEEGKHYFETM-KSKYSM-VPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
+E+GK + K Y +P ++++ ++S L +A E +SM V +
Sbjct: 256 R----IEQGKQIHAILFKVSYQFDIPVA---TALLNMYAKSNHLSDARECFESMVVRNVV 308
Query: 283 SAWGALLGACKFYGE-VELGEIVANRLFE-LEPENSSPYVLLSSIYAAADQWLDVSHVKN 340
S W A++ GE E + L E L+P+ + +LSS + W ++ V+
Sbjct: 309 S-WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW-EIKQVQA 366
Query: 341 KMKERG 346
+ ++G
Sbjct: 367 MVTKKG 372
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 203/397 (51%), Gaps = 44/397 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGG------------------------------------ 24
+ +R+F +P+ ++++WNAM+ G
Sbjct: 333 ETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 392
Query: 25 ----LVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR-DAFL 79
++GG I+ + ++ + + + +I Y++ + + +FD D
Sbjct: 393 ARLRFLEGGKQIHGVVIRTEISKNSHI-VSGLIAVYSECEKMEISECIFDDCINELDIAC 451
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVK-PDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +ISG+ N L +AL +F+ M V P+E +++S+CS++ +L + +
Sbjct: 452 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 511
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
+S + + V AL DM KCG +D A + F+ + +++ + MI G +G ++A
Sbjct: 512 VKSGY-VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 570
Query: 199 VGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD 258
VGL+ KM++ G PD F +LTACSH LVE G +M+ + + P +HY C+VD
Sbjct: 571 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 630
Query: 259 LLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
L R+G+L++A +L ++ P +S + W LL +C+ +G+V L VA +L L+P++S+
Sbjct: 631 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAA 690
Query: 319 YVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSW 355
YVLLS+ Y++ QW D + ++ M + + K PG SW
Sbjct: 691 YVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 727
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 4/206 (1%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ ++ GD ARKVFD+M RDV S+ + KVGD+ A +FD P+RD
Sbjct: 11 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 70
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +IS + G +AL +++ M P + + S++SACS+V LD + C+
Sbjct: 71 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKV--LDGVFGMRCHG 128
Query: 139 SQSSIDIGQTHVVA-ALIDMNAKCGNM-DRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
+ + V AL+ M AKCG + D ++FE + + + SY ++I GL+
Sbjct: 129 VAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVL 188
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILT 222
+AV +F M +G+ D+ + IL+
Sbjct: 189 EAVQMFRLMCEKGVQVDSVCLSNILS 214
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 168/358 (46%), Gaps = 47/358 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKV------FDDMPERDVVSFTVMID 54
+ A+ +F +MPE N+ SWN M+ G G + + + V D + + V+ ++
Sbjct: 267 NGAELIFAEMPEVNVVSWNIMIVGF--GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 324
Query: 55 GYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
+ GD+ + R +F P+ W+ ++SGY+ EA+ F+ M+ N+KPD+
Sbjct: 325 ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 384
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE- 173
+ ++S+C+++ L+ K + + ++ I +H+V+ LI + ++C M+ + +F++
Sbjct: 385 LSVILSSCARLRFLEGGKQIHGVVIRTEIS-KNSHIVSGLIAVYSECEKMEISECIFDDC 443
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG-LIPDNAAFTVILTACS------- 225
+ + D+ + SMI G + +A+ LF +M L P+ +F +L++CS
Sbjct: 444 INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH 503
Query: 226 ----HGRLVEEG---KHYFET----MKSKYSMVPSPEHY------------ACMVDLLSR 262
HG +V+ G + ET M K + S + M+
Sbjct: 504 GRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGH 563
Query: 263 SGQLKEAYELLKSMPVESHAS---AWGALLGACKFYGEVELG-EIVAN--RLFELEPE 314
+G+ EA L + M + ++L AC G VE G EI+++ R+ +EPE
Sbjct: 564 NGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPE 621
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 113/283 (39%), Gaps = 84/283 (29%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTV--------- 51
D RVF + + N S+ A++GGL + ++ A ++F M E+ V +V
Sbjct: 157 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 216
Query: 52 ---------------------------------------MIDGYAKVGDIASARALFDKA 72
+++ YAK D+ A +F +
Sbjct: 217 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 276
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
P+ + W+++I G+ Q +++++ M +P+E +S++ AC + G+++ +
Sbjct: 277 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 336
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIH 192
++F +P+ + ++ +M+ G S +
Sbjct: 337 ------------------------------------RIFSSIPQPSVSAWNAMLSGYSNY 360
Query: 193 GYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+ E+A+ F +M + L PD +VIL++C+ R +E GK
Sbjct: 361 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 403
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 36/202 (17%)
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
M +K D Y+ L+ + G+ D A+ V + + + A + K G++
Sbjct: 1 MGMKSDTYLCNRLLDLYIECGDGDYARKV-----FDEMSVRDVYSWNAFLTFRCKVGDLG 55
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
A ++F+ MP+RD+ S+ +MI L G+ E+A+ ++ +M+ +G +P +L+ACS
Sbjct: 56 EACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACS 115
Query: 226 -----------HGRLVEEG--KHYFE-----TMKSKYSMV-------------PSPEHYA 254
HG V+ G K+ F +M +K + P+ Y
Sbjct: 116 KVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYT 175
Query: 255 CMVDLLSRSGQLKEAYELLKSM 276
++ L+R ++ EA ++ + M
Sbjct: 176 AVIGGLARENKVLEAVQMFRLM 197
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 193/394 (48%), Gaps = 40/394 (10%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV-------- 51
+A +VF +MP+ ++ W+ M+ + G A +F M E VV FT+
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 52 -----------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+ID YAK + +A LF + ++ W+
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNT 419
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I GY G +A +F+ V E S + AC+ + ++DL V L+ +
Sbjct: 420 VIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVH-GLAIKT 478
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ + V +LIDM AKCG++ A +F EM D+ S+ ++I G S HG QA+ +
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+ M + P+ F +L+ CS+ L+++G+ FE+M + + P EHY CMV LL R
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
SGQL +A +L++ +P E W A+L A E A + ++ P++ + YVL+
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLV 658
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S++YA A QW +V+ ++ MKE G++K PG SWI
Sbjct: 659 SNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWI 692
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y ++GD++ A +F++ PK D WS +I+ + QNG NEA+ +F M V P+E+ +
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
S+++ C+ L + + + + D+ +V ALID+ AKC MD A KLF E+
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDL-DIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
++ S+ ++I G G +A +F + L + F+ L AC+ ++ G
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ 470
Query: 236 Y----FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGA 291
+T +K V + ++D+ ++ G +K A + M AS W AL+
Sbjct: 471 VHGLAIKTNNAKKVAVSNS-----LIDMYAKCGDIKFAQSVFNEMETIDVAS-WNALISG 524
Query: 292 CKFYG 296
+G
Sbjct: 525 YSTHG 529
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I+ Y+ G + SAR +F+ +D +W+ ++S Y +NG ++LK+ M + P+
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
Query: 112 EYIMVSLMSACSQVGNLDLAKWV------DCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
Y + + A +G D AK V CY+ + +G L+ + + G+M
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG-------LLQLYTQLGDMS 299
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
A K+F EMPK D+ + MI +G+ +AV LF +M ++P+ + IL C+
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 226 HGR 228
G+
Sbjct: 360 IGK 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 127/273 (46%), Gaps = 12/273 (4%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASA 65
+P + ++ AM+ ++ D I+A+ + D+ ++ D+ + ++++ Y K G A
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA 103
Query: 66 RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
LFD+ P+R+ + L GYA + + ++ + + + ++ S + +
Sbjct: 104 LNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSL 159
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSM 185
++ W+ + + D V AALI+ + CG++D A +FE + +D+ + +
Sbjct: 160 DKAEICPWLHSPIVKLGYD-SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKY 244
+ +GY E ++ L + M G +P+N F L A + K + + +K+ Y
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
V P ++ L ++ G + +A+++ MP
Sbjct: 279 --VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 205/394 (52%), Gaps = 48/394 (12%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM-PER-DVVSFTV--MIDGYAKVG 60
RVF + E++L SWNA++ G ++ G A VF M ER ++ FT+ ++ A +
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 61 DIASAR---ALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVS 117
+ + A+ + L + +IS Y+ GL NEA+K++ + NV DE ++ S
Sbjct: 200 ILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSL---NVHTDEVMLNS 256
Query: 118 LMSAC------------------------------SQVGNLDLAKWVDCYLSQSSIDIGQ 147
L+S C S +L + K + C ++ +
Sbjct: 257 LISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF-VSD 315
Query: 148 THVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
+ + L+DM KCG + +A +F +P + + S+ SMI +++G +A+ +F +M
Sbjct: 316 SKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCE 375
Query: 208 EG--LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQ 265
EG ++P++ F V+++AC+H LV+EGK F MK KY +VP EHY C +D+LS++G+
Sbjct: 376 EGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGE 435
Query: 266 LKEAYELLKSMPVESHAS----AWGALLGACKFYGEVELGEIVANRLF-ELEPENSSPYV 320
+E + L++ M + S W A+L AC ++ GE VA RL E PEN+S YV
Sbjct: 436 TEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYV 495
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCS 354
L+S+ YAA +W V ++ K+K +GL K G S
Sbjct: 496 LVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 114/232 (49%), Gaps = 11/232 (4%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD--EYIMVSLMSAC 122
A LFD+ P+RD + +S + ++G PN+ L +F +++ PD + ++ AC
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGAC 94
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSY 182
S + + + V + + + G T ALIDM +K G++ + ++FE + ++DL S+
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETG-TISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSW 153
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYFETM 240
+++ G +G ++A+G+F M E + + ++ C+ +++++GK H +
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
+ +V M+ S G + EA ++ S+ V + +L+ C
Sbjct: 214 TGRDLVVLG----TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 116/256 (45%), Gaps = 10/256 (3%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E +S T +ID Y+K G + + +F+ ++D W+ L+SG+ +NG EAL +F
Sbjct: 116 ETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAA 175
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M V+ E+ + S++ C+ + L K V + + D+ + A+I + G
Sbjct: 176 MYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL--VVLGTAMISFYSSVG 233
Query: 163 NMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
++ A K++ + D S+I G + ++A L ++ P+ + L
Sbjct: 234 LINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSL 288
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH 281
CS + GK + + V + ++D+ + GQ+ +A + +++P +S
Sbjct: 289 AGCSDNSDLWIGKQ-IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSV 347
Query: 282 ASAWGALLGACKFYGE 297
S W +++ A G+
Sbjct: 348 VS-WTSMIDAYAVNGD 362
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 190 bits (483), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 202/394 (51%), Gaps = 41/394 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD----------------- 45
A ++F +P+ +L WN M+ G G +F+ M R
Sbjct: 160 ASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLID 219
Query: 46 ----VVSFTV------------------MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+V+++V +++ Y++ IASA ++F+ + D S L
Sbjct: 220 PSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSL 279
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+GY++ G EAL +F + + KPD ++ ++ +C+++ + K V Y+ + +
Sbjct: 280 ITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGL 339
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
++ V +ALIDM +KCG + A LF +P++++ S+ S+I GL +HG+A A F
Sbjct: 340 EL-DIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFT 398
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
++L GLIPD F+ +L C H L+ +G+ FE MKS++ + P EHY MV L+ +
Sbjct: 399 EILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMA 458
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY-VLL 322
G+L+EA+E + S+ + GALL C+ + L E+VA + + E S Y V+L
Sbjct: 459 GKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVML 518
Query: 323 SSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
S++YA +W +V +++ + E KLPG SW
Sbjct: 519 SNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 41/328 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF------DDMPER----------- 44
+A+++F PER++ WN+++ K +F D P+
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 45 ----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
D + + ++ Y+K G I A LF P D LW+V
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I GY G ++ + +F M+ +P+ Y MV+L S L +A V + + +
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+D ++V AL++M ++C + A +F + + DL + S+I G S G ++A+ LF
Sbjct: 238 LD-SHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLF 296
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
++ G PD ++L +C+ GK + + + + + ++D+ S+
Sbjct: 297 AELRMSGKKPDCVLVAIVLGSCAELSDSVSGKE-VHSYVIRLGLELDIKVCSALIDMYSK 355
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLG 290
G LK A L +P ++ S +LG
Sbjct: 356 CGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
RD T + YA D+ SAR LFD P+R FLW+ +I YA+ L +F +
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI 97
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
+ +PD + L S+ + + + S + Q +A++ +K G
Sbjct: 98 LRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI-CGSAIVKAYSKAGL 156
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ A+KLF +P DL + MI G G+ ++ + LFN M + G P N V LT+
Sbjct: 157 IVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQP-NCYTMVALTS 215
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 204/393 (51%), Gaps = 43/393 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGG-----------------------------------LVK 27
A+++F +M +++ SW M+ G
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410
Query: 28 GGDLINARKVFDDMPERDVVSFTV----MIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
GDL ++ + ++S+ + +I+ Y+K I A +F P+++ W+ +
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I+G N EAL + M+ M ++P+ + + ++AC+++G L K + ++ ++ +
Sbjct: 471 IAGLRLNNRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGV 529
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ + AL+DM +CG M+ A F K+D+ S+ ++ G S G V LF+
Sbjct: 530 GL-DDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M+ + PD F +L CS ++V +G YF M+ Y + P+ +HYAC+VDLL R+
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRA 646
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G+L+EA++ ++ MPV + WGALL AC+ + +++LGE+ A +FEL+ ++ Y+LL
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLC 706
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
++YA +W +V+ V+ MKE GL GCSW+
Sbjct: 707 NLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 65/355 (18%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGG-------------------------------- 29
+A VF +M ERNL SWN +VGG K G
Sbjct: 147 DAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTC 206
Query: 30 ----DLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
DL ++V + E D+ +I Y K GD+ SAR LFD+ P+RD W+
Sbjct: 207 GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWN 266
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISGY +NG+ +E L++F M ++V PD + S++SAC +G+ L + + Y+ +
Sbjct: 267 AMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326
Query: 142 --SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
++DI V +L M G+ A KLF M ++D+ S+ +MI G + ++A+
Sbjct: 327 GFAVDIS---VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSH-GRL---VEEGKHYFETMKSKYSMVPSPEHYAC 255
+ M + + PD +L+AC+ G L VE K + Y +V +
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN----- 438
Query: 256 MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
++++ S+ + +A ++ ++P + +W +++ + + NR FE
Sbjct: 439 LINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLR----------LNNRCFE 482
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 159/348 (45%), Gaps = 57/348 (16%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGG-------------------DLINARKVF---- 38
+A+ +F +MP R++ SWNAM+ G + G DL+ V
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 39 ---DDMPERDVVSFTV-------------MIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
D RD+ ++ + + Y G A LF + ++D W+
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY-LSQS 141
+ISGY N LP++A+ ++ M+ +VKPDE + +++SAC+ +G+LD V+ + L+
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG--VELHKLAIK 426
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ I V LI+M +KC +D+A +F +P++++ S+ S+I GL ++ +A+ +
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-I 485
Query: 202 FNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK----HYFETMKSKYSMVPSPEHYACMV 257
F + + L P+ T L AC+ + GK H T +P+ ++
Sbjct: 486 FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA-----LL 540
Query: 258 DLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVA 305
D+ R G++ A+ S + ++W LL Y E G +V
Sbjct: 541 DMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLTG---YSERGQGSMVV 583
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELM-NVKPDEYI 114
+ + G++ A +F K +R+ F W+VL+ GYA+ G +EA+ ++ M + VKPD Y
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
++ C + +L K V ++ + ++ VV ALI M KCG++ A LF+ M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYEL-DIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 175 PKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
P+RD+ S+ +MI G +G + + LF M + PD T +++AC
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC---------SQVGNLDLAKWV 134
+ G NG EA+K+ M+ + V DE + V+L+ C S+V ++ L+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSS-- 123
Query: 135 DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
+S +++G A + M + GN+ A +F +M +R+LFS+ ++ G + GY
Sbjct: 124 ---MSSLGVELGN-----AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY 175
Query: 195 AEQAVGLFNKML-NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY 253
++A+ L+++ML G+ PD F +L C + GK +Y +
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKE-VHVHVVRYGYELDIDVV 234
Query: 254 ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
++ + + G +K A L MP S W A++
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIIS-WNAMI 269
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 184/325 (56%), Gaps = 9/325 (2%)
Query: 24 GLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
G V+ G+ I+ R + + DV ++ YAK GDI AR +FD P +D W+ +
Sbjct: 209 GSVQIGEAIH-RDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
++GY +GL +EAL IF+ M ++PD+ V++ S ++V + + + ++ + +
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQLHGWVIRRGM 324
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ + V ALI + +K G + +A +F++M +RD S+ ++I S H + F
Sbjct: 325 E-WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFE 380
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M PD F +L+ C++ +VE+G+ F M +Y + P EHYACMV+L R+
Sbjct: 381 QMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRA 440
Query: 264 GQLKEAYELL-KSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
G ++EAY ++ + M +E+ + WGALL AC +G ++GE+ A RLFELEP+N + LL
Sbjct: 441 GMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELL 500
Query: 323 SSIYAAADQWLDVSHVKNKMKERGL 347
IY+ A + DV V+ M +RGL
Sbjct: 501 IRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 14/241 (5%)
Query: 56 YAKVGDIASARALFDKAPKRDA--FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
YA G A +FD+ KRD+ F W+ LISGYA+ G +A+ ++ M VKPD +
Sbjct: 137 YASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRF 196
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
++ AC +G++ + + + L + +V+ AL+ M AKCG++ +A +F+
Sbjct: 197 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY-DVYVLNALVVMYAKCGDIVKARNVFDM 255
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT---ACSHGRLV 230
+P +D S+ SM+ G HG +A+ +F M+ G+ PD A + +L + HGR +
Sbjct: 256 IPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQL 315
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
G M+ + S+ + ++ L S+ GQL +A + M +E +W A++
Sbjct: 316 -HGWVIRRGMEWELSVANA------LIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIIS 367
Query: 291 A 291
A
Sbjct: 368 A 368
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 22/140 (15%)
Query: 114 IMVSLMSACSQVGNLD----LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
I SL+ C + +D + + YL ++++ I + L+ + A CG + A++
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGIS-----SKLVRLYASCGYAEVAHE 148
Query: 170 LFEEMPKRDL--FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS-- 225
+F+ M KRD F++ S+I G + G E A+ L+ +M +G+ PD F +L AC
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 226 ---------HGRLVEEGKHY 236
H LV+EG Y
Sbjct: 209 GSVQIGEAIHRDLVKEGFGY 228
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 176/314 (56%), Gaps = 3/314 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E + S T ++ Y + + + +F + W+ LISG QNG AL F+
Sbjct: 299 ESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRK 358
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M ++KP+ + + S + CS + + + + +++ D + + + LID+ KCG
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDK-YAGSGLIDLYGKCG 417
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
D A +F+ + + D+ S +MI + +G+ +A+ LF +M+N GL P++ +L
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
AC++ RLVEEG F++ + K ++ + +HYACMVDLL R+G+L+EA E+L + +
Sbjct: 478 ACNNSRLVEEGCELFDSFR-KDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDL 535
Query: 283 SAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKM 342
W LL ACK + +VE+ E + ++ E+EP + +L+S++YA+ +W V +K+KM
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKM 595
Query: 343 KERGLRKLPGCSWI 356
K+ L+K P SW+
Sbjct: 596 KDMKLKKNPAMSWV 609
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 48/307 (15%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGG----------------------DLINARKVF 38
D A++VF M ER++ +WN+++ L+K L + K F
Sbjct: 116 DYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAF 175
Query: 39 DDMP-----ER-------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
D+ +R +V + ++D Y K G A+ + D+ ++D L
Sbjct: 176 SDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI 235
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ LI GY+Q G EA+K FQ M + V+P+EY S++ +C + ++ K + + +
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Query: 141 SSID---IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ 197
S + QT +L+ M +C +D + ++F+ + + S+ S+I GL +G E
Sbjct: 296 SGFESALASQT----SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 198 AVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
A+ F KM+ + + P++ + L CS+ + EEG+ + +KY + ++
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ-IHGIVTKYGFDRDKYAGSGLI 410
Query: 258 DLLSRSG 264
DL + G
Sbjct: 411 DLYGKCG 417
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%)
Query: 47 VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELM 106
+S + ++D K GDI AR +FD +R W+ LI+ ++ EA+++++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
NV PDEY + S+ A S + A+ +++ V +AL+DM K G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 167 ANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
A + + + ++D+ ++I G S G +AV F ML E + P+ + +L +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 227 GRLVEEGK 234
+ + GK
Sbjct: 280 LKDIGNGK 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 48/84 (57%)
Query: 152 AALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
+ L+D + KCG++D A ++F+ M +R + ++ S+I L H +++AV ++ M+ ++
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 212 PDNAAFTVILTACSHGRLVEEGKH 235
PD + + A S L +E +
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQR 186
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 186/375 (49%), Gaps = 35/375 (9%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
D+A VF M E++ SWNA+V + G L F MP D V++ +ID + K G
Sbjct: 209 DDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSG 268
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV---- 116
D +A + P ++ W+ +++GY + EA + F M V+ DEY +
Sbjct: 269 DFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLA 328
Query: 117 -----------SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
SL+ AC+ LD + V +ALIDM +KCG +
Sbjct: 329 AVAALAVVPWGSLIHACAHKLGLD----------------SRVVVASALIDMYSKCGMLK 372
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTAC 224
A +F MP+++L + MI G + +G + +A+ LFN++ E + PD F +L C
Sbjct: 373 HAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Query: 225 SHGRL-VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
SH + +E YFE M ++Y + PS EH ++ + + G++ +A ++++
Sbjct: 433 SHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGV 492
Query: 284 AWGALLGACKFYGEVELGEIVANRLFELEPENSSP--YVLLSSIYAAADQWLDVSHVKNK 341
AW ALLGAC +++ + VA ++ EL + Y+++S++YA ++W +V ++
Sbjct: 493 AWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKI 552
Query: 342 MKERGLRKLPGCSWI 356
M+E G+ K G SWI
Sbjct: 553 MRESGVLKEVGSSWI 567
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y + A +FD+ P D W+ L+SGY Q+G E + +F + +V P+E+
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
+ ++AC+++ L + L + ++ G V LIDM KCG MD A +F+ M
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
++D S+ +++ S +G E + F++M N PD
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVT------------------- 256
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
Y ++D +SG A+++L MP ++S+W +L
Sbjct: 257 -----------------YNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTIL 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 31/292 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGY 56
++A +VF +MP+ ++ SWN++V G V+ G +F ++ DV SFT +
Sbjct: 107 EDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAAC 166
Query: 57 AK-----VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
A+ +G ++ + K + + + LI Y + G ++A+ +FQ ME + D
Sbjct: 167 ARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME----EKD 222
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLF 171
+++++CS+ G L+L W + Q + T LID K G+ + A ++
Sbjct: 223 TVSWNAIVASCSRNGKLELGLW---FFHQ--MPNPDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 172 EEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH----- 226
+MP + S+ +++ G + +A F KM + G+ D + +++L A +
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 227 -GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
G L+ H K + + ++D+ S+ G LK A + +MP
Sbjct: 338 WGSLIHACAH-------KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP 382
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 110/236 (46%), Gaps = 31/236 (13%)
Query: 80 WSVLISGYAQNGLPNEALKIFQG-MELMN--VKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
WS ++ A+ G ++ + + +EL+N KPD +V L+ G + L + +
Sbjct: 24 WSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
Y+++ + T + +L+ +++ A+K+F+EMP D+ S+ S++ G G +
Sbjct: 80 YVTKHGF-VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACS-----------HGRLVEEGKHYFETMKSKYS 245
+ + LF ++ + P+ +FT L AC+ H +LV+ G +
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN-- 196
Query: 246 MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
C++D+ + G + +A + + M E +W A++ +C G++ELG
Sbjct: 197 ---------CLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELG 242
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 177 bits (449), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 196/393 (49%), Gaps = 40/393 (10%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV---------------- 46
A RVF M N+ SW ++ GLV G + + + +M +R+V
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Query: 47 -----------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
V ++D YA + A + +RD ++ L
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSL 499
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
++ + + G AL + M ++ D+ + +SA + +G L+ K + CY +S
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF 559
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
G V+ +L+DM +KCG+++ A K+FEE+ D+ S+ ++ GL+ +G+ A+ F
Sbjct: 560 S-GAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFE 618
Query: 204 KMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
+M + PD+ F ++L+ACS+GRL + G YF+ MK Y++ P EHY +V +L R+
Sbjct: 619 EMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRA 678
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLS 323
G+L+EA ++++M ++ +A + LL AC++ G + LGE +AN+ L P + + Y+LL+
Sbjct: 679 GRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLA 738
Query: 324 SIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+Y + + +N M E+ L K G S +
Sbjct: 739 DLYDESGKPELAQKTRNLMTEKRLSKKLGKSTV 771
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 127/255 (49%), Gaps = 16/255 (6%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G I++ + +P +VV T ++D Y++ + A + + + ++D FLW+ ++SG+
Sbjct: 243 GKTIHSNIIVRGIP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG-- 146
+N EA+ F M + ++P+ + +++S CS V +LD K + +I +G
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIH----SQTIKVGFE 357
Query: 147 -QTHVVAALIDMNAKCGNMD-RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
T V AL+DM KC + A+++F M ++ S+ ++I GL HG+ + GL +
Sbjct: 358 DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 205 MLNEGLIPDNAAFTVILTACS---HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLS 261
M+ + P+ + +L ACS H R V E Y MV +VD +
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS----LVDAYA 473
Query: 262 RSGQLKEAYELLKSM 276
S ++ A+ +++SM
Sbjct: 474 SSRKVDYAWNVIRSM 488
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 164/380 (43%), Gaps = 52/380 (13%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PE------------ 43
NA+++F +M R + +W M+ K + +A +F++M P
Sbjct: 76 NARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA 135
Query: 44 --RDV-------------------VSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
RD+ V + + D Y+K G A LF D W++
Sbjct: 136 GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTM 195
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+IS EAL+ + M V P+E+ V L+ A S +G L+ K + +
Sbjct: 196 MISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRG 254
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I + + +L+D ++ M+ A ++ ++D+F + S++ G + A++AVG F
Sbjct: 255 IPLNVV-LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTF 313
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLS 261
+M + GL P+N ++ IL+ CS R ++ GK + +T+K + S + +VD+
Sbjct: 314 LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFE--DSTDVGNALVDMYM 371
Query: 262 R-SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVE--LGEIVANRLFELEPENSSP 318
+ S EA + +M V + +W L+ +G V+ G ++ E+EP
Sbjct: 372 KCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPN---- 426
Query: 319 YVLLSSIYAAADQWLDVSHV 338
V LS + A + V V
Sbjct: 427 VVTLSGVLRACSKLRHVRRV 446
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 56 YAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIM 115
Y K I +AR LFD+ R F W+V+IS + ++ AL +F+ M P+E+
Sbjct: 68 YLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTF 127
Query: 116 VSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP 175
S++ +C+ + ++ V + ++ + G + V ++L D+ +KCG A +LF +
Sbjct: 128 SSVVRSCAGLRDISYGGRVHGSVIKTGFE-GNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
D S+ MI L +A+ +++M+ G+ P+ F +L A S G
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSF-----LGLE 241
Query: 236 YFETMKSKYSMVPSPEHY---ACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
+ +T+ S + P + +VD S+ ++++A +L S E W +++
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSGF 300
Query: 293 --KFYGEVELGEIVANRLFELEPENSSPYVLLS 323
+ +G + R L+P N + +LS
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 10/278 (3%)
Query: 52 MIDGYAK--VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
++D Y K ++ ++R +F + W+ LI G +G + + M V+
Sbjct: 366 LVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P+ + ++ ACS++ ++ + YL + +D G+ V +L+D A +D A
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD-GEMVVGNSLVDAYASSRKVDYAWN 483
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+ M +RD +Y S++ + G E A+ + N M +G+ D + ++A ++
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 230 VEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL 288
+E GKH + ++KS +S S + +VD+ S+ G L++A ++ + + S W L
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLN--SLVDMYSKCGSLEDAKKVFEEIATPDVVS-WNGL 600
Query: 289 LGACKFYGEVE--LGEIVANRLFELEPENSSPYVLLSS 324
+ G + L R+ E EP++ + +LLS+
Sbjct: 601 VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 16/143 (11%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMIDGY 56
++AK+VF ++ ++ SWN +V GL G + +A F++M E D V+F +++
Sbjct: 580 EDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSAC 639
Query: 57 A--KVGDIA-----SARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ ++ D+ + +++ P+ + ++ V I G A G EA + +E M++K
Sbjct: 640 SNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRA--GRLEEATGV---VETMHLK 694
Query: 110 PDEYIMVSLMSACSQVGNLDLAK 132
P+ I +L+ AC GNL L +
Sbjct: 695 PNAMIFKTLLRACRYRGNLSLGE 717
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 154 LIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
L+ + K + A KLF+EM R +F++ MI + A+ LF +M+ G P+
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 214 NAAFTVILTACSHGRLVEE-GKHYFETMKSKY---SMVPSPEHYACMVDLLSRSGQLKEA 269
F+ ++ +C+ R + G+ + +K+ + S+V S + DL S+ GQ KEA
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS-----LSDLYSKCGQFKEA 178
Query: 270 YELLKSMPVESHASAW----GALLGACK------FYGEV 298
EL S+ + +W +L+GA K FY E+
Sbjct: 179 CELFSSLQ-NADTISWTMMISSLVGARKWREALQFYSEM 216
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 157/259 (60%), Gaps = 2/259 (0%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAF 78
N ++ K G + RKVFD MP R +VS+T M+ G + SA +F++ P R+
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
W+ +I+ Y +N P+EA ++F+ M++ +VKP+E+ +V+L+ A +Q+G+L + +WV Y
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQA 198
++ + + ALIDM +KCG++ A K+F+ M + L ++ SMI L +HG E+A
Sbjct: 278 HKNGF-VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 199 VGLFNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMV 257
+ LF +M E + PD F +L+AC++ V++G YF M Y + P EH ACM+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 258 DLLSRSGQLKEAYELLKSM 276
LL ++ ++++A L++SM
Sbjct: 397 QLLEQALEVEKASNLVESM 415
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I + G+ A +F++ F W+++I + N P EAL +F
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLF----------- 106
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG-QTHVVA-------------ALIDM 157
++ ++S SQ + L+ SSI +G Q H +A L+D+
Sbjct: 107 ---ILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDL 163
Query: 158 NAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF 217
KCG D K+F++MP R + S+ +M+ GL + + A +FN+M ++ ++
Sbjct: 164 YFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV----SW 219
Query: 218 TVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
T ++TA R +E F M+ P + +V+LL S QL
Sbjct: 220 TAMITAYVKNRRPDEAFQLFRRMQVDDV---KPNEFT-IVNLLQASTQL 264
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 42/215 (19%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV--SFTV------- 51
D+A+ VF QMP RN+ SW AM+ VK A ++F M DV FT+
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 52 ------------------------------MIDGYAKVGDIASARALFDKAPKRDAFLWS 81
+ID Y+K G + AR +FD + W+
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 82 VLISGYAQNGLPNEALKIFQGMELM-NVKPDEYIMVSLMSACSQVGNL-DLAKWVDCYLS 139
+I+ +G EAL +F+ ME +V+PD V ++SAC+ GN+ D ++ +
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM 174
I + H A +I + + +++A+ L E M
Sbjct: 382 VYGISPIREH-NACMIQLLEQALEVEKASNLVESM 415
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 17/307 (5%)
Query: 52 MIDGYAKVGDIASARALFDKAP-KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
+I+ + K +A+A LFDK ++ W+++++GY +G EA+ F+ M++ +P
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP 602
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+ V+++ A +++ L + V L Q QT V +L+DM AKCG ++ + K
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF-CSQTPVGNSLVDMYAKCGMIESSEKC 661
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLV 230
F E+ + + S+ +M+ + HG A AV LF M L PD+ +F +L+AC H LV
Sbjct: 662 FIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLV 721
Query: 231 EEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLG 290
EEGK FE M ++ + EHYACMVDLL ++G EA E+++ M V++ WGALL
Sbjct: 722 EEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLN 781
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWL-DVSHVKNKMKERGLRK 349
+ + + + L +L +LEP N S Y + D+ L +V++V ++K
Sbjct: 782 SSRMHCNLWLSNAALCQLVKLEPLNPSHY--------SQDRRLGEVNNVSR------IKK 827
Query: 350 LPGCSWI 356
+P CSWI
Sbjct: 828 VPACSWI 834
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 11/308 (3%)
Query: 29 GDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
GDL+ + D ++ DV T ++ Y+K G++ A LF RD WS +I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
+ Y Q G +EA+ +F+ M +++KP+ + S++ C+ V L K + CY ++ I+
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ A+I M AKCG A K FE +P +D ++ ++ QG + G A +A ++
Sbjct: 434 -SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRS 263
M G+ PD+ +L C+ G Y + +K + H ++++ ++
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKC 550
Query: 264 GQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVAN-RLFELEPENSSPYVLL 322
L A L E +W ++ +G+ E E VA R ++E + +
Sbjct: 551 DALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE--EAVATFRQMKVEKFQPNAVTFV 608
Query: 323 SSIYAAAD 330
+ + AAA+
Sbjct: 609 NIVRAAAE 616
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 158/364 (43%), Gaps = 45/364 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM--------------------- 41
A+++F+ + +R++ SW+AM+ + G A +F DM
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAG 413
Query: 42 ------------------PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
E ++ + T +I YAK G + A F++ P +DA ++ L
Sbjct: 414 VAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNAL 473
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
GY Q G N+A +++ M+L V PD MV ++ C+ + V + +
Sbjct: 474 AQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGF 533
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMP-KRDLFSYCSMIQGLSIHGYAEQAVGLF 202
D + HV ALI+M KC + A LF++ ++ S+ M+ G +HG AE+AV F
Sbjct: 534 D-SECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M E P+ F I+ A + + G ++ +P + +VD+ ++
Sbjct: 593 RQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNS-LVDMYAK 651
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYG--EVELGEIVANRLFELEPENSSPYV 320
G ++ + + + + +W +L A +G + ++ + EL+P++ S
Sbjct: 652 CGMIESSEKCFIEIS-NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLS 710
Query: 321 LLSS 324
+LS+
Sbjct: 711 VLSA 714
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E DV T +++ Y K D+ SAR +FDK +D W+ ++SG AQNG + AL +F
Sbjct: 132 ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD 191
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M V D + +L+ A S++ D+ + + + + + + LIDM C
Sbjct: 192 MRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS---SGLIDMYCNCA 248
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
++ A +FEE+ ++D S+ +M+ + +G+ E+ + LF+ M N
Sbjct: 249 DLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRN 293
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKP 110
+I+ Y+ +R +FD LW+ +I GY + GL EAL F M E + P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCY--LSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
D+Y + AC+ G++D K + + +++ ++ ++ AL++M K ++ A
Sbjct: 99 DKYSFTFALKACA--GSMDFKKGLRIHDLIAEMGLE-SDVYIGTALVEMYCKARDLVSAR 155
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA----- 223
++F++M +D+ ++ +M+ GL+ +G + A+ LF+ M + + D+ + ++ A
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE 215
Query: 224 ------CSHGRLVEEG 233
C HG ++++G
Sbjct: 216 KSDVCRCLHGLVIKKG 231
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 141/252 (55%), Gaps = 1/252 (0%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
VV ++ Y++ G + L + D W++ I+ +++ E +++F+ M
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
N++PD+Y VS++S CS++ +L L + ++++ T V LIDM KCG++
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 166 RANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
K+FEE +++L ++ ++I L IHGY ++A+ F + L+ G PD +F ILTAC
Sbjct: 599 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACR 658
Query: 226 HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
HG +V+EG F+ MK Y + P +HY C VDLL+R+G LKEA L++ MP + A W
Sbjct: 659 HGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVW 717
Query: 286 GALLGACKFYGE 297
L C + E
Sbjct: 718 RTFLDGCNRFAE 729
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 133/325 (40%), Gaps = 41/325 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM------PERDVVS-------- 48
A +VF QMPERN S+N ++ G K GD+ A VF +M P + VS
Sbjct: 68 AGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL 127
Query: 49 ------------------------FTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
T ++ Y ++ + A +F+ P + W+ ++
Sbjct: 128 DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM 187
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
S G E + F+ + M E + ++ S V +LD++K + C ++ +D
Sbjct: 188 SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLD 247
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
+ VV +LI KCGN A ++F++ D+ S+ ++I + +A+ LF
Sbjct: 248 C-EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
M G P+ + +L S +L+ G+ M K ++D ++ G
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQ-IHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 265 QLKEAYELLKSMPVESHASAWGALL 289
L+++ L + + W ALL
Sbjct: 366 NLEDS-RLCFDYIRDKNIVCWNALL 389
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 138/364 (37%), Gaps = 76/364 (20%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD----------------- 45
A+R+F ++ SWNA++ K + + A K+F MPE
Sbjct: 269 AERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSL 328
Query: 46 ----------------------VVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+V +ID YAK G++ +R FD ++ W+ L
Sbjct: 329 VQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNAL 388
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS------------QVGNLD-- 129
+SGYA P L +F M M +P EY + + +C ++G D
Sbjct: 389 LSGYANKDGP-ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDND 447
Query: 130 --LAKWVDCYLSQSSID---------IGQTHVVAALI--DMNAKCGNMDRANKLFEEMPK 176
L+ + Y ++ G T VV I + ++ G + KL + +
Sbjct: 448 YVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ 507
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK-- 234
D S+ I S Y E+ + LF ML + PD F IL+ CS + G
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI 567
Query: 235 HYFETMKSKYSMVPSPEHYAC--MVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGAC 292
H T K+ +S + + C ++D+ + G ++ ++ + E + W AL+
Sbjct: 568 HGLIT-KTDFS---CADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCL 622
Query: 293 KFYG 296
+G
Sbjct: 623 GIHG 626
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 49/265 (18%)
Query: 3 AKRVFVQMPERNLTSWNAMVG-------------------------------GLVKG--- 28
A++VF MP ++L +WN M+ G++KG
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 29 -GDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
DL ++++ ++ ++ +I Y K G+ A +F A D W+ +
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I A++ P +ALK+F M P++ VS++ S V L + + L ++
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC 347
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQ----AV 199
+ G + ALID AKCGN++ + F+ + +++ + +++ GYA + +
Sbjct: 348 ETGIV-LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS-----GYANKDGPICL 401
Query: 200 GLFNKMLNEGLIPDNAAFTVILTAC 224
LF +ML G P F+ L +C
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 29 GDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYA 88
G I+ D D V+ID Y K G I S +F++ +++ W+ LIS
Sbjct: 564 GSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLG 623
Query: 89 QNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
+G EAL+ F+ + KPD +S+++AC G + + + ++
Sbjct: 624 IHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMD 683
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMP 175
H A +D+ A+ G + A L EMP
Sbjct: 684 HYRCA-VDLLARNGYLKEAEHLIREMP 709
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+I Y K+G+++ A +FD+ P+R+ ++ +I GY++ G ++A +F M P+
Sbjct: 55 IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPN 114
Query: 112 EYIMVSLMSACSQVGNLDLAKWVDCY-LS-QSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ + L+S S LD+ + LS + + + V L+ + + ++ A +
Sbjct: 115 QSTVSGLLSCAS----LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
+FE+MP + L ++ M+ L G+ ++ + F +++ G ++F +L S
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
Query: 115 MVSLMSACSQVGNLDLAKWVDCY-LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
+VSL++ C + + K + ++ S+ + +V +I + K G + A K+F++
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 174 MPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
MP+R+ S+ ++I+G S +G ++A G+F++M G +P+ + + +L+ S V G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAG 132
Query: 234 KHYFETMKSKYSMVPSPEHY-ACMVDLLSRSGQLKEAYELLKSMPVES 280
+ KY + + C++ L R L+ A ++ + MP +S
Sbjct: 133 TQ-LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKS 179
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 180/388 (46%), Gaps = 44/388 (11%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINAR----------------------------- 35
R+++ E ++ +WN + GG ++ G+ I A
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 36 -----KVFDDMPERDVVSFTVMIDG--------YAKVGDIASARALFDKAPKRDAFLWSV 82
KVF + R SF+ ID Y++ D+ A +F + W+
Sbjct: 335 ALKWGKVFHCLVIRSC-SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISG+A N E + + M L P+ + S++ ++VGNL K CY+ +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ +L+DM AK G + A ++F+ M KRD +Y S+I G G E A+ F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
M G+ PD+ +L+ACSH LV EG F M+ + + EHY+CMVDL R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR-LFELEPENSSPYVL 321
+G L +A ++ ++P E ++ LL AC +G +GE A++ L E +PE+ Y+L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRK 349
L+ +YA W + VK + + G++K
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 9/295 (3%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK-- 71
NL NA++ + G + AR++FD M ERD VS+ +I+ Y + A L D+
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 72 --APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
+ W+ + G + G AL GM NV+ M++ + ACS +G L
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 130 LAKWVDCYLSQS-SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
K C + +S S +V +LI M ++C ++ A +F+++ L ++ S+I G
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
+ + +E+ L +ML G P++ IL + ++ GK + + + S
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI 303
+ +VD+ ++SG++ A + SM + + G YG + GE+
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG----YGRLGKGEV 508
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D V ++ Y+ + A+ + + + W+VLI Y +N E++ +++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M ++ DE+ S++ AC+ + + + V + SS +V ALI M + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC-NLYVCNALISMYKRFG 233
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+D A +LF+ M +RD S+ ++I + +A L ++M G+ + I
Sbjct: 234 KVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG 293
Query: 223 AC 224
C
Sbjct: 294 GC 295
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 180/388 (46%), Gaps = 44/388 (11%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINAR----------------------------- 35
R+++ E ++ +WN + GG ++ G+ I A
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 36 -----KVFDDMPERDVVSFTVMIDG--------YAKVGDIASARALFDKAPKRDAFLWSV 82
KVF + R SF+ ID Y++ D+ A +F + W+
Sbjct: 335 ALKWGKVFHCLVIRSC-SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+ISG+A N E + + M L P+ + S++ ++VGNL K CY+ +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ +L+DM AK G + A ++F+ M KRD +Y S+I G G E A+ F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
M G+ PD+ +L+ACSH LV EG F M+ + + EHY+CMVDL R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANR-LFELEPENSSPYVL 321
+G L +A ++ ++P E ++ LL AC +G +GE A++ L E +PE+ Y+L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 322 LSSIYAAADQWLDVSHVKNKMKERGLRK 349
L+ +YA W + VK + + G++K
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 9/295 (3%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK-- 71
NL NA++ + G + AR++FD M ERD VS+ +I+ Y + A L D+
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 72 --APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
+ W+ + G + G AL GM NV+ M++ + ACS +G L
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 130 LAKWVDCYLSQS-SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
K C + +S S +V +LI M ++C ++ A +F+++ L ++ S+I G
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
+ + +E+ L +ML G P++ IL + ++ GK + + + S
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEI 303
+ +VD+ ++SG++ A + SM + + G YG + GE+
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG----YGRLGKGEV 508
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 1/182 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
E D V ++ Y+ + A+ + + + W+VLI Y +N E++ +++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M ++ DE+ S++ AC+ + + + V + SS +V ALI M + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC-NLYVCNALISMYKRFG 233
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+D A +LF+ M +RD S+ ++I + +A L ++M G+ + I
Sbjct: 234 KVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG 293
Query: 223 AC 224
C
Sbjct: 294 GC 295
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 169/315 (53%), Gaps = 3/315 (0%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQG 102
ER V T ++ Y K + SA+ +FD +RD LW+ +I G+++ G A++ F
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
M + D + + S++ ACS + L + C ++ D + V AL+DM K G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMS-VCGALVDMYGKNG 552
Query: 163 NMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+ A +F DL + SM+ S HG E+A+ F ++L G +PD + +L
Sbjct: 553 KYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL-KSMPVESH 281
ACSH +GK + MK + + +HY+CMV+L+S++G + EA EL+ +S P +
Sbjct: 613 ACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQ 671
Query: 282 ASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNK 341
A W LL AC +++G A ++ +L+PE+++ ++LLS++YA +W DV+ ++ K
Sbjct: 672 AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRK 731
Query: 342 MKERGLRKLPGCSWI 356
++ K PG SWI
Sbjct: 732 IRGLASSKDPGLSWI 746
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 48/278 (17%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGD--------------------------LINA 34
+ A++VF +MP RN+ S+NA+ + D L+
Sbjct: 149 EQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQV 208
Query: 35 RKVFDDMP--------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
V +D+ +VV T ++ Y+ GD+ SAR +FD RDA W
Sbjct: 209 CAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAW 268
Query: 81 SVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ 140
+ +I G +N + L F+ M + V P ++ +++ CS++G+ L K + +
Sbjct: 269 NTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIV 328
Query: 141 SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVG 200
S + + AL+DM CG+M A +F + +L S+ S+I G S +G+ EQA+
Sbjct: 329 SD-SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAML 387
Query: 201 LFNKMLNEGL-IPDNAAFTVILTACS------HGRLVE 231
++ ++L PD F+ ++A + HG+L+
Sbjct: 388 MYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKI--FQGMEL 105
+I Y + + AR +FDK P+R+ L +V + L ++ +K+ FQ +
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAA--LIDMNAKCGN 163
M + +V L C + L A+ + + + A LI M +CG+
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS 147
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIH-GYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
+++A K+F++MP R++ SY ++ S + +A A L M E + P+++ FT ++
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQ 207
Query: 223 ACS 225
C+
Sbjct: 208 VCA 210
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 197/404 (48%), Gaps = 53/404 (13%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV-------------- 46
D+A +F + E+N ++NA++ G + G + A K+F DM +R V
Sbjct: 368 DSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC 427
Query: 47 ----------------VSF---------TVMIDGYAKVGDIASARALFDKAPKR--DAFL 79
+ F T ++D + +A A +FD+ P +
Sbjct: 428 GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKA 487
Query: 80 WSVLISGYAQNGLPNEALKIF-QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
+ +I GYA+NGLP++A+ +F + + + DE + +++ C +G ++ + CY
Sbjct: 488 TTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYA 547
Query: 139 SQ----SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGY 194
+ S I +G +LI M AKC + D A K+F M + D+ S+ S+I +
Sbjct: 548 LKAGYFSDISLGN-----SLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRN 602
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTAC--SHGRLVEEGKHYFETMKSKYSMVPSPEH 252
++A+ L+++M + + PD T++++A + + + F +MK+ Y + P+ EH
Sbjct: 603 GDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEH 662
Query: 253 YACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
Y V +L G L+EA + + SMPV+ S ALL +C+ + + + VA + +
Sbjct: 663 YTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTK 722
Query: 313 PENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
PE S Y+L S+IY+A+ W ++ +M+ERG RK P SWI
Sbjct: 723 PETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 13 RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKA 72
+ L+ NA++G K D+ +++ M +D V+FT MI Y G + SA +F
Sbjct: 318 QELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV 377
Query: 73 PKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAK 132
+++ ++ L++G+ +NG +ALK+F M V+ ++ + S + AC V +++
Sbjct: 378 TEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSE 437
Query: 133 WVDCYLSQSSIDIGQTH---VVAALIDMNAKCGNMDRANKLFEEMPKR--DLFSYCSMIQ 187
+ + I G + AL+DM +C M A ++F++ P + S+I
Sbjct: 438 QIHGF----CIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIG 493
Query: 188 GLSIHGYAEQAVGLFNKMLNE-GLIPDNAAFTVILTAC 224
G + +G ++AV LF++ L E L D + T+IL C
Sbjct: 494 GYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 52 MIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN-VKP 110
+I Y K+G A +F ++ LISG+++ L EALK+F M V+P
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAK--CGNMDRAN 168
+EY V++++AC +V L + + +S + V +L+ + K + D
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF-LNSVFVSNSLMSLYDKDSGSSCDDVL 238
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLN-EGLIPDNAAFTVILTACSHG 227
KLF+E+P+RD+ S+ +++ L G + +A LF +M EG D+ + +L++C+
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 228 RLVEEGK 234
++ G+
Sbjct: 299 SVLLRGR 305
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 115/268 (42%), Gaps = 37/268 (13%)
Query: 28 GGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPK-----RDAFLWSV 82
G + K+FD++P+RDV S+ ++ K G A LF + + D+F S
Sbjct: 231 GSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLST 290
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL--------DLAKWV 134
L+S + + + +G EL I + LM S L D+ K
Sbjct: 291 LLSSCTDSSV------LLRGRELHG----RAIRIGLMQELSVNNALIGFYSKFWDMKKVE 340
Query: 135 DCY---LSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSI 191
Y ++Q ++ T ++ A + G +D A ++F + +++ +Y +++ G
Sbjct: 341 SLYEMMMAQDAVTF--TEMITAYMSF----GMVDSAVEIFANVTEKNTITYNALMAGFCR 394
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS--HGRLVEEGKHYFETMKSKYSMVPS 249
+G+ +A+ LF ML G+ + + T + AC + V E H F K+ +
Sbjct: 395 NGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCI---KFGTAFN 451
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSMP 277
P ++D+ +R ++ +A E+ P
Sbjct: 452 PCIQTALLDMCTRCERMADAEEMFDQWP 479
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 171/309 (55%), Gaps = 8/309 (2%)
Query: 50 TVMIDGYAK-VGDIASARALF-DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
T +I Y++ + D LF + + RD W+ +I+ +A P A+ +F +
Sbjct: 306 TALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEK 364
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
+ PD Y S++ AC+ + A + + + + T + +LI AKCG++D
Sbjct: 365 LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGF-LADTVLNNSLIHAYAKCGSLDLC 423
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
++F++M RD+ S+ SM++ S+HG + + +F KM + PD+A F +L+ACSH
Sbjct: 424 MRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHA 480
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGA 287
VEEG F +M K +P HYAC++D+LSR+ + EA E++K MP++ A W A
Sbjct: 481 GRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIA 540
Query: 288 LLGACKFYGEVELGEIVANRLFEL-EPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERG 346
LLG+C+ +G LG++ A++L EL EP NS Y+ +S+IY A + + + +M+
Sbjct: 541 LLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWR 600
Query: 347 LRKLPGCSW 355
+RK P SW
Sbjct: 601 VRKEPDLSW 609
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 22/190 (11%)
Query: 44 RDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGM 103
++V+ +I+ YAK G+I AR +FD P+R+ W+ LI+GY Q G E +F M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 104 ELMNVKPDEYIMVSLMSAC-----SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
L + P+E+ + S++++C QV L L + C + +V A+I M
Sbjct: 154 -LSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSI----------YVANAVISMY 202
Query: 159 AKCGNMDRANK---LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
+C + A + +FE + ++L ++ SMI ++A+G+F +M ++G+ D A
Sbjct: 203 GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRA 262
Query: 216 AFTVILTACS 225
+L CS
Sbjct: 263 ---TLLNICS 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 11/183 (6%)
Query: 1 DNAKRVFVQMPERNLT-SWNAMVGGLVKGGDLINARKVFDDMPE-------RDVVSFTVM 52
+ A +F Q+ + L+ W L L+ AR + D V +
Sbjct: 351 ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 53 IDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
I YAK G + +FD RD W+ ++ Y+ +G + L +FQ M+ + PD
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDS 467
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFE 172
++L+SACS G ++ + + + + Q + A +IDM ++ A ++ +
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 173 EMP 175
+MP
Sbjct: 528 QMP 530
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 154/244 (63%), Gaps = 9/244 (3%)
Query: 19 NAMVGGLVKGGDLINARKVFDDM-PERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDA 77
A++ K D+ +AR++F+++ +R++V++ MI GY ++GD++SAR LFD PKR+
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV 362
Query: 78 FLWSVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDC 136
W+ LI+GYA NG A++ F+ M + + KPDE M+S++SAC + +L+L +
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD 422
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
Y+ ++ I + + +LI M A+ GN+ A ++F+EM +RD+ SY ++ + +G
Sbjct: 423 YIRKNQIKLNDSGY-RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGV 481
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
+ + L +KM +EG+ PD +T +LTAC+ L++EG+ F+++++ P +HYACM
Sbjct: 482 ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Query: 257 VDLL 260
DLL
Sbjct: 537 -DLL 539
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 184/365 (50%), Gaps = 40/365 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVG 60
++A++VF Q+ +R + WN M+ G K G+ A K+FD MPE DVVS+TVMI G+AKV
Sbjct: 153 ESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVK 212
Query: 61 DIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
D+ +AR FD+ P++ W+ ++SGYAQNG +AL++F M + V+P+E V ++S
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC------------------- 161
ACS + L + + + + + + V AL+DM+AKC
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLN-CFVKTALLDMHAKCRDIQSARRIFNELGTQRNL 331
Query: 162 -------------GNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNE 208
G+M A +LF+ MPKR++ S+ S+I G + +G A A+ F M++
Sbjct: 332 VTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDY 391
Query: 209 G-LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLK 267
G PD +L+AC H +E G + ++ K + + Y ++ + +R G L
Sbjct: 392 GDSKPDEVTMISVLSACGHMADLELGDCIVDYIR-KNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 268 EAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP-YVLLSSIY 326
EA + M E ++ L A G+ G N L +++ E P V +S+
Sbjct: 451 EAKRVFDEMK-ERDVVSYNTLFTAFAANGD---GVETLNLLSKMKDEGIEPDRVTYTSVL 506
Query: 327 AAADQ 331
A ++
Sbjct: 507 TACNR 511
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 108/241 (44%), Gaps = 22/241 (9%)
Query: 65 ARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
R +FD + F+ + + +++ + N+ L++++ + PD + ++ + +
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCS 184
G L A L + +V ++DM K +++ A K+F+++ +R +
Sbjct: 119 FGILFQA------LVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDN--AAFTVILTACSHGRLVEEGKHYFETMKS 242
MI G G E+A LF+ M P+N ++TV++T + + +E + YF+ M
Sbjct: 173 MISGYWKWGNKEEACKLFDMM------PENDVVSWTVMITGFAKVKDLENARKYFDRMPE 226
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALLGACKFYGEVE 299
K S + M+ +++G ++A L M V + + W ++ AC F +
Sbjct: 227 K-----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 300 L 300
L
Sbjct: 282 L 282
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 167/346 (48%), Gaps = 42/346 (12%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGD-------------------------LINARKV 37
A+ +F MPERN+ SWNAM+GG V + ++N
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSG 407
Query: 38 FDDMP--------------ERDVVSFTVMIDGYAKVGDIASARALFDKAPK-RDAFLWSV 82
D+ + +V+ ++D Y K G + SA F + + RD W+
Sbjct: 408 ISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNA 467
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
L++G A+ G +AL F+GM++ KP +Y + +L++ C+ + L+L K + +L +
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG 526
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I + A++DM +KC D A ++F+E RDL + S+I+G +G +++ LF
Sbjct: 527 YKIDVV-IRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+ NEG+ PD+ F IL AC VE G YF +M +KY + P EHY CM++L +
Sbjct: 586 MLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCK 645
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRL 308
G L + E L MP + + AC+ Y +LG A RL
Sbjct: 646 YGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 140/312 (44%), Gaps = 40/312 (12%)
Query: 26 VKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLIS 85
VK L +AR+VFD +D+ S+T + GYA G AR LFD P+R+ W+ ++
Sbjct: 309 VKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLG 368
Query: 86 GYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDI 145
GY +EAL M D +V +++ CS + ++ + K ++ + D
Sbjct: 369 GYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDT 428
Query: 146 GQTHVVAALIDMNAKCGNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
V AL+DM KCG + AN F +M + RD S+ +++ G++ G +EQA+ F
Sbjct: 429 NVI-VANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEG 487
Query: 205 MLNEGLIPDNAAFTVILTACS-----------HGRLVEEG-------KHYFETMKSK--- 243
M E P +L C+ HG L+ +G + M SK
Sbjct: 488 MQVEAK-PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRC 546
Query: 244 --YSMVPSPEHYACMVDLL---------SRSGQLKEAYE---LLKSMPVESHASAWGALL 289
Y++ E A DL+ R+G+ KE +E LL++ V+ + +L
Sbjct: 547 FDYAIEVFKE--AATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGIL 604
Query: 290 GACKFYGEVELG 301
AC G VELG
Sbjct: 605 QACIREGHVELG 616
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 16/309 (5%)
Query: 31 LINARKV------FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLI 84
++ ARKV F +P + I+ Y K G + AR LF++ P+RD W+ +I
Sbjct: 77 VVQARKVQSHLVTFSPLPP--IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVI 134
Query: 85 SGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID 144
+ AQNG+ +E ++F+ M V+ E ++ +C + +L L + + C + +
Sbjct: 135 TACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYS 194
Query: 145 IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNK 204
G + +++D+ KC M A ++F+E+ S+ +++ G+ ++AV +F K
Sbjct: 195 -GNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFK 253
Query: 205 MLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG 264
ML + P N + ++ ACS +E GK + K S+V + D+ +
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGK-VIHAIAVKLSVVADTVVSTSVFDMYVKCD 312
Query: 265 QLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPE-NSSPYVLLS 323
+L+ A + + S W + + G A LF+L PE N + +
Sbjct: 313 RLESARRVFDQTRSKDLKS-WTSAMSGYAMSGLTR----EARELFDLMPERNIVSWNAML 367
Query: 324 SIYAAADQW 332
Y A +W
Sbjct: 368 GGYVHAHEW 376
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 160/297 (53%), Gaps = 4/297 (1%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
++ S + MI GY+ G + A+ LFD +++ +W+ + GY P+ L++ +
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 105 LMNVK-PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
PD +MVS++ ACS ++ K + + ++ I + +V A +DM +KCGN
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI-LMDKKLVTAFVDMYSKCGN 443
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
++ A ++F+ +RD Y +MI G + HG+ ++ F M G PD F +L+A
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM-PVESHA 282
C H LV EG+ YF++M Y++ P HY CM+DL ++ +L +A EL++ + VE A
Sbjct: 504 CRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDA 563
Query: 283 SAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYA-AADQWLDVSHV 338
GA L AC + EL + V +L +E N S Y+ +++ YA +A LD++ +
Sbjct: 564 VILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSARSKLDITDI 620
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 36/285 (12%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPK-RDAFLWSVLISGYAQNGLPNEALKIFQGM 103
D V+ MI Y + GDI A ++F + P+ D W+ LI+GYAQNG EALK+ M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 104 ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
E +K DE+ ++++ S + +L + K V + ++ V + ++D+ KCGN
Sbjct: 252 EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG-SYSNKFVSSGIVDVYCKCGN 310
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKM------------------ 205
M A +L+S SMI G S G +A LF+ +
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 206 --------------LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE 251
NE PD+ +L ACS +E GK + ++ +
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKE-IHGHSLRTGILMDKK 429
Query: 252 HYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG 296
VD+ S+ G ++ A + S E + A++ C +G
Sbjct: 430 LVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 40/257 (15%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP-KR 75
S N +V K G L AR VFD+M ER+V S+ +I Y K ++ AR LF+ +R
Sbjct: 25 SSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCER 84
Query: 76 DAFLWSVLISGYAQ-NGLPNEALKIFQGM---ELMNVKPDEYIMVSLMSACSQVGNLDLA 131
D ++ L+SG+A+ +G +EA+++F M E ++ D++ + +++ +++ N+
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKC------------------------------ 161
+ + L ++ D G V++LI M +KC
Sbjct: 145 EQLHGVLVKTGND-GTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 162 ---GNMDRANKLFEEMPK-RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF 217
G++D+A +F P+ D S+ ++I G + +GY E+A+ + M GL D +F
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 218 TVILTACSHGRLVEEGK 234
+L S + ++ GK
Sbjct: 264 GAVLNVLSSLKSLKIGK 280
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 186/396 (46%), Gaps = 42/396 (10%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF------DDMPERDVVSFTVMI- 53
D A VF+ M +R++ SWN ++ G+ A F + P+ VS V I
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245
Query: 54 --------------------------------DGYAKVGDIASARALFDKAPKRDAFLWS 81
D ++K + + LF + K D+ L +
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I Y+ + +AL++F +V+PD++ S++S+ + V LD V + +
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKL 364
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
D+ T V +L++M K G++D A +F + +DL + ++I GL+ + A +++ +
Sbjct: 365 GFDL-DTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAI 423
Query: 202 FNKML-NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL 260
FN++L N+ L PD IL AC + V EG F +M+ + + P EHYAC+++LL
Sbjct: 424 FNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELL 483
Query: 261 SRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
R G + EA ++ +P E + W +L A G+ L E VA + E EP++S PY+
Sbjct: 484 CRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYL 543
Query: 321 LLSSIYAAADQWLDVSHVKNKMKERGLRKLPGCSWI 356
+L IY +W + ++ M E L+ G S I
Sbjct: 544 VLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKI 579
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 38/293 (12%)
Query: 3 AKRVFVQMPERNL---TSW-NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAK 58
AK V Q+ E T W N + K G +INA ++FDD+P+++ +++ V + G K
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 59 VGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY---IM 115
G + +A LFD+ P+RD W+ +ISG G +++F M+ ++P E+ I+
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL 142
Query: 116 VSLMSA------------CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
SL++ CS V +L W +++DM + G
Sbjct: 143 ASLVTCVRHGEQIHGNAICSGVSRYNLVVW------------------NSVMDMYRRLGV 184
Query: 164 MDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
D A +F M RD+ S+ +I S G E A+ F M + PD +++++
Sbjct: 185 FDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSI 244
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
CS R + +GK + K + + +D+ S+ +L ++ +L + +
Sbjct: 245 CSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 38/260 (14%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVM---- 52
+NA +F +MPER++ SWN M+ GLV G +VF DM ++ +F+++
Sbjct: 87 NNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLV 146
Query: 53 -----------------------------IDGYAKVGDIASARALFDKAPKRDAFLWSVL 83
+D Y ++G A ++F RD W+ L
Sbjct: 147 TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCL 206
Query: 84 ISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI 143
I + +G AL F M M ++PDEY + ++S CS + L K +
Sbjct: 207 ILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 144 DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFN 203
+ + V+ A IDM +KC +D + KLF E+ K D SMI S H E A+ LF
Sbjct: 267 -LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFI 325
Query: 204 KMLNEGLIPDNAAFTVILTA 223
+ + + PD F+ +L++
Sbjct: 326 LAMTQSVRPDKFTFSSVLSS 345
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 178/390 (45%), Gaps = 49/390 (12%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMIDGYAKVG 60
R F +PE+++ SWN++V G ++++ +F M + F ++ ++
Sbjct: 270 RSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNS 329
Query: 61 DIASARALFDKAPK-----RDAFLWSVLISGYAQ-NGLPNEALKIFQGMELMNVKPDEYI 114
DI S + + K + S LI Y + NG+ N AL ++Q + +N++ +
Sbjct: 330 DIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL-LYQSLPCLNLECCNSL 388
Query: 115 MVSLM-------------------SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--- 152
M SLM + +V + K + L +S H A
Sbjct: 389 MTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKS 448
Query: 153 ----------ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+LID K G + + K+F+E+ ++F S+I G + +G V +
Sbjct: 449 GYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKML 508
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M LIPD +L+ CSH LVEEG+ F++++SKY + P + YACMVDLL R
Sbjct: 509 REMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGR 568
Query: 263 SGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLL 322
+G +++A LL ++ AW +LL +C+ + +G A L LEPEN + Y+ +
Sbjct: 569 AGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQV 628
Query: 323 SSIY------AAADQWLDVSHVKNKMKERG 346
S Y + Q +++ + M+E G
Sbjct: 629 SKFYFEIGDFEISRQIREIAASRELMREIG 658
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%)
Query: 51 VMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
V++D Y+ GD++ + F+ P++D W+ ++S A G ++L +F M+ +P
Sbjct: 254 VLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRP 313
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+S ++ CS+ ++ K + CY+ + D+ HV +ALIDM KC ++ + L
Sbjct: 314 SIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALL 373
Query: 171 FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
++ +P +L S++ L G + + +F M++EG D + +L A S
Sbjct: 374 YQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 38 FDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEAL 97
++ P V + ID K G++ SA FD+ RD +++LISG ++ G A+
Sbjct: 38 LEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAI 97
Query: 98 KIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG-QTHVVAALID 156
+++ M ++ S++S CS L + + + S+ G V +AL+
Sbjct: 98 ELYAEMVSCGLRESASTFPSVLSVCSD--ELFCREGIQVHCRVISLGFGCNMFVRSALVG 155
Query: 157 MNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAA 216
+ A +D A KLF+EM R+L +++ G +++ ++ +M EG+ +
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLT 215
Query: 217 FTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ ++ CSH RLV EGK + + + +VD S G L + ++
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV 275
Query: 277 PVESHASAWGALLGACKFYGEV 298
P E +W +++ C YG V
Sbjct: 276 P-EKDVISWNSIVSVCADYGSV 296
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 105/229 (45%), Gaps = 2/229 (0%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+ ++ YA + + A LFD+ R+ + ++L+ + Q G +++ MEL V
Sbjct: 151 SALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVA 210
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ ++ CS + K + + +S +I V L+D + CG++ + +
Sbjct: 211 KNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMR 270
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
F +P++D+ S+ S++ + +G ++ LF+KM G P F L CS
Sbjct: 271 SFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD 330
Query: 230 VEEGKH-YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP 277
++ GK + +K + V S + ++D+ + ++ + L +S+P
Sbjct: 331 IQSGKQIHCYVLKMGFD-VSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 137 YLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAE 196
+L ++ D+ TH ID K GN+ A++ F+EM RD+ +Y +I G S +G +
Sbjct: 37 FLEENPSDLVYTH--NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSL 94
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEG 233
+A+ L+ +M++ GL + F +L+ CS EG
Sbjct: 95 RAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG 131
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 154/327 (47%), Gaps = 42/327 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVF----------------------- 38
+A R F M E+++ SW A++ + G I A +F
Sbjct: 236 SALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS 295
Query: 39 ----------------DDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
M + DV T ++D YAK G+I+ R +FD R+ W+
Sbjct: 296 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS 355
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I+ +A+ G EA+ +F+ M+ ++ + +VS++ AC VG L L K + + ++S
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
I+ ++ + L+ + KCG A + +++P RD+ S+ +MI G S G+ +A+
Sbjct: 416 IE-KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFL 474
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M+ EG+ P+ ++ L AC++ + G+ K +++ A ++ + ++
Sbjct: 475 KEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAK 533
Query: 263 SGQLKEAYELLKSMPVESHASAWGALL 289
G + EA+ + SMP E + +W A++
Sbjct: 534 CGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 168/385 (43%), Gaps = 80/385 (20%)
Query: 19 NAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDK------- 71
N ++ V+ GDL+ ARKVFD MPE++ V++T MIDGY K G A ALF+
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 72 -------------APKRDAF-------------------LWSVLISGYAQNGLPNEALKI 99
+R F + S L+ YAQ G AL+
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 100 FQGMELMNV-------------------------------KPDEYIMVSLMSACSQVGNL 128
F ME +V P+E+ + S++ ACS+ L
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKAL 300
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQG 188
+ V + + I V +L+DM AKCG + K+F+ M R+ ++ S+I
Sbjct: 301 RFGRQVHSLVVKRMIKT-DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAA 359
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC-SHGRLVEEGKHYFETMKSKYSMV 247
+ G+ E+A+ LF M LI +N IL AC S G L+ + + + +K+ S+
Sbjct: 360 HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN--SIE 417
Query: 248 PSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYG-EVELGEIVAN 306
+ + +V L + G+ ++A+ +L+ +P S W A++ C G E E + +
Sbjct: 418 KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS-WTAMISGCSSLGHESEALDFLKE 476
Query: 307 RLFE-LEPENSSPYVLLSSIYAAAD 330
+ E +EP +P+ S++ A A+
Sbjct: 477 MIQEGVEP---NPFTYSSALKACAN 498
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 3/203 (1%)
Query: 22 VGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWS 81
VG L+ G +L ++ + E++V + ++ Y K G+ A + + P RD W+
Sbjct: 398 VGALLLGKEL--HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWT 455
Query: 82 VLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+ISG + G +EAL + M V+P+ + S + AC+ +L + + + +++
Sbjct: 456 AMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS-IAKK 514
Query: 142 SIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGL 201
+ + V +ALI M AKCG + A ++F+ MP+++L S+ +MI G + +G+ +A+ L
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 202 FNKMLNEGLIPDNAAFTVILTAC 224
+M EG D+ F IL+ C
Sbjct: 575 MYRMEAEGFEVDDYIFATILSTC 597
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 46/183 (25%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----------------- 44
+A V Q+P R++ SW AM+ G G A +M +
Sbjct: 438 DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 45 ----------------------DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
+V + +I YAK G ++ A +FD P+++ W
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKA 557
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVD----CYL 138
+I GYA+NG EALK+ ME + D+YI +++S C G+++L + V+ CYL
Sbjct: 558 MIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC---GDIELDEAVESSATCYL 614
Query: 139 SQS 141
S
Sbjct: 615 ETS 617
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 137/273 (50%), Gaps = 9/273 (3%)
Query: 47 VSFTVMIDGYAKVGDIASARALFDKAPKRD-AFLWSVLISGY---AQNGLPNEALKIFQG 102
V + V + AKV +A RAL + + ++I Y ++G +AL
Sbjct: 185 VYYEVSVLEEAKVSVLAKIRALVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDI 244
Query: 103 MELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS--SIDIGQTHVVAALIDMNAK 160
+ MN D ++ L C + L AK V +S S +D+ HV L++M +
Sbjct: 245 LASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHV---LLEMYSN 301
Query: 161 CGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
CG + A +FE+M +++L ++C +I+ + +G+ E A+ +F++ EG IPD F I
Sbjct: 302 CGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGI 361
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
AC V+EG +FE+M Y + PS E Y +V++ + G L EA E ++ MP+E
Sbjct: 362 FYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEP 421
Query: 281 HASAWGALLGACKFYGEVELGEIVANRLFELEP 313
+ W L+ + +G +ELG+ A + L+P
Sbjct: 422 NVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ S V+++ Y+ G A ++F+K +++ W ++I +A+NG +A+ +F +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV---AALIDMNAKC 161
PD + + AC +G++D + S D G + +L++M A
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLL---HFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 162 GNMDRANKLFEEMPKRDLFSYCSMIQGLS-IHG------YAEQAVGL-----FNKMLNEG 209
G +D A + E MP + LS +HG Y + V NK EG
Sbjct: 405 GFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREG 464
Query: 210 LIPDNAA 216
IP A+
Sbjct: 465 FIPVKAS 471
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 40/310 (12%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSF-------- 49
+ +RVF +RN SW A++ G G A + M + DVV+
Sbjct: 370 SGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCA 429
Query: 50 ---------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLWSV 82
T ++ Y+K G LFD+ +R+ W+
Sbjct: 430 ELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTA 489
Query: 83 LISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSS 142
+I Y +N +++F+ M L +PD M +++ CS + L L K + ++ +
Sbjct: 490 MIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKE 549
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLF 202
+ V A +I M KCG++ AN F+ + + ++ ++I+ + A+ F
Sbjct: 550 FE-SIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCF 608
Query: 203 NKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
+M++ G P+ FT +L+ CS V+E +F M Y++ PS EHY+ +++LL+R
Sbjct: 609 EQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNR 668
Query: 263 SGQLKEAYEL 272
G+++EA L
Sbjct: 669 CGRVEEAQRL 678
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 163/394 (41%), Gaps = 76/394 (19%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGD--LINARKVFDDMPERDV-----------VS 48
+A++VF + N+ SWNA++ G V G + F +M E V S
Sbjct: 164 DAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKS 223
Query: 49 F----------------------------TVMIDGYAKVGDIASARALFDKAPKRDAFLW 80
F T ++D Y K G + AR +FD+ +RD +W
Sbjct: 224 FAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVW 283
Query: 81 SVLISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
+I+G A N EAL +F+ M + P+ I+ +++ V L L K V ++
Sbjct: 284 GAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVL 343
Query: 140 QSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAV 199
+S + Q V + LID+ KCG+M ++F +R+ S+ +++ G + +G +QA+
Sbjct: 344 KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL 403
Query: 200 GLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGK--HYF-------------ETMKSKY 244
M EG PD +L C+ R +++GK H + ++ Y
Sbjct: 404 RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMY 463
Query: 245 SMVPSPEH---------------YACMVDLLSRSGQLKEAYELLKSMPVESH---ASAWG 286
S PE+ + M+D + L+ E+ + M + H + G
Sbjct: 464 SKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMG 523
Query: 287 ALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
+L C ++LG+ + + + E E S P+V
Sbjct: 524 RVLTVCSDLKALKLGKELHGHILKKEFE-SIPFV 556
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 135/284 (47%), Gaps = 11/284 (3%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALF 69
N T+++A++ V+ L++ ++V + E + T ++ Y G + A+ +F
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 70 DKAPKRDAFLWSVLISGYAQNGLP--NEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
D++ + + W+ L+ G +G + L F M + V + Y + ++ + +
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQ 187
L ++ + + +L+DM KCG + A ++F+E+ +RD+ + +MI
Sbjct: 230 LRQGLKTHALAIKNGL-FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 188 GLSIHGYAEQAVGLFNKMLNEGLI-PDNAAFTVILTACSHGRLVEEGKH-YFETMKSKYS 245
GL+ + +A+GLF M++E I P++ T IL + ++ GK + +KSK +
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSK-N 347
Query: 246 MVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
V P ++ ++DL + G + + + +A +W AL+
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK-QRNAISWTALM 390
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 119/220 (54%), Gaps = 5/220 (2%)
Query: 95 EALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWV-DCYLS-QSSIDIGQTHVVA 152
EA+++ +E D ++ L C + L+ A+ V +C ++ S D+G +
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARN--- 158
Query: 153 ALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
A+I+M + C ++D A K+FEEMP+ + + C M++ +GY E+A+ LF + EG P
Sbjct: 159 AIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKP 218
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
+ F + + C+ V+EG F+ M +Y +VPS EHY + +L+ SG L EA
Sbjct: 219 NGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNF 278
Query: 273 LKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELE 312
++ MP+E W L+ + +G+VELG+ A + +L+
Sbjct: 279 VERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 97 LKIFQGMELMNVKPDE-YI-----MVSLMSACSQVGNLDLAKWV-DCYLSQSSIDIGQTH 149
+KI + +E++++ D+ YI ++ L C +V L+ A+ V DC + +D H
Sbjct: 91 VKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI---TPLDARSYH 147
Query: 150 VVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
V I+M + C + D A +F EMPKR+ ++ +MI+ L+ +G E+A+ +F + + EG
Sbjct: 148 TV---IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEG 204
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
PD F + AC + EG +FE+M Y MV S E Y ++++L+ G L EA
Sbjct: 205 NKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEA 264
Query: 270 YELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSS 317
+ ++ M VE W L+ C G +ELG+ A + +L+ S
Sbjct: 265 LDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMS 312
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 31 LINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQN 90
L AR V D + D S+ +I+ Y+ A +F++ PKR++ W +I A+N
Sbjct: 128 LEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKN 187
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD--LAKWVDCYLSQSSIDIGQT 148
G A+ +F KPD+ I ++ AC +G+++ L + Y + +
Sbjct: 188 GEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMED 247
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEM 174
+V +I+M A CG++D A E M
Sbjct: 248 YV--NVIEMLAACGHLDEALDFVERM 271
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 108/204 (52%), Gaps = 1/204 (0%)
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
PD V L +C+ + +L+ +K V + QS G + +I M +C ++ A +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFR-GDPKLNNMVISMFGECSSITDAKR 292
Query: 170 LFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRL 229
+F+ M +D+ S+ M+ S +G + A+ LF +M GL P+ F + AC+
Sbjct: 293 VFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGG 352
Query: 230 VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL 289
+EE +F++MK+++ + P EHY ++ +L + G L EA + ++ +P E A W A+
Sbjct: 353 IEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMR 412
Query: 290 GACKFYGEVELGEIVANRLFELEP 313
+ +G+++L + + + +++P
Sbjct: 413 NYARLHGDIDLEDYMEELMVDVDP 436
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
++I + + I A+ +FD +D W +++ Y+ NG+ ++AL +F+ M +K
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 110 PDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
P+E +++ AC+ VG ++ A D ++ I H + L + KCG++ A
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVL-GVLGKCGHLVEAE 393
Query: 169 KLFEEMP 175
+ ++P
Sbjct: 394 QYIRDLP 400
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
C L AK V +++ SS+ I ++I+M + CG+++ A +F MP+R+L +
Sbjct: 191 CGDAQALQEAKVVHEFIT-SSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLET 249
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+C +I+ + +G E A+ F++ EG PD F I AC + EG +FE+M
Sbjct: 250 WCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMY 309
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKFYGEVELG 301
+Y ++P EHY +V +L+ G L EA ++SM E + W L+ + +G++ LG
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILG 367
Query: 302 EIVANRLFELE 312
+ + + +L+
Sbjct: 368 DRCQDMVEQLD 378
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGME 104
D+ ++ +I+ Y+ G + A +F+ P+R+ W +I +A+NG +A+ F +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLD--LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG 162
KPD + + AC +G+++ L + Y I + +V +L+ M A+ G
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYV--SLVKMLAEPG 332
Query: 163 NMDRANKLFEEM-PKRDLFS--------YCSMIQGLSIHGYAEQ-AVGLFNKMLNEGLIP 212
+D A + E M P DL+ + +I G EQ NK GL+P
Sbjct: 333 YLDEALRFVESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVP 392
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 20/293 (6%)
Query: 1 DNAKRVFVQM----PERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
++A +F QM N+ ++NA+V GL + G +A + DM +R +V++FT +
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
ID + KVG + A+ L++ + D F + LI+G GL +EA ++F ME
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
P+E I +L+ + ++ + +SQ + + T LI G D A
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV-VANTITYTVLIQGYCLVGRPDVAQ 383
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA- 223
++F +M R D+ +Y ++ GL +G E+A+ +F M + + +T+I+
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
C G+ VE+ F ++ SK M P+ Y M+ R G + EA L K M
Sbjct: 444 CKLGK-VEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 13/268 (4%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
E D+V+FT +++GY I A ALFD+ K + ++ LI +N N A++
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
+F M +P+ +L++ ++G A W+ + + I+ ALID
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE-PNVITFTALIDAF 268
Query: 159 AKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
K G + A +L+ M + D+F+Y S+I GL ++G ++A +F M G P+
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 215 AAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD---LLSRSGQLKEAYE 271
+T ++ + VE+G F M K +V + Y ++ L+ R +E +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 272 LLKSMPVESHASAWGALLGACKFYGEVE 299
+ S + LL G+VE
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 12/126 (9%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVM 52
D A+ VF QM R ++ ++N ++ GL G + A +F+ M +R+ +V++T++
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 53 IDGYAKVGDIASAR----ALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
I G K+G + A +LF K K + ++ +ISG+ + GL +EA +F+ M+
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 109 KPDEYI 114
P+E +
Sbjct: 500 LPNESV 505
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 19/296 (6%)
Query: 1 DNAKRVFVQMPER-----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTV 51
D+AK V M ++ ++N+++ G K G + A +V DM + +V S+T+
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 52 MIDGYAKVGDIASARALFDKAP----KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
++DG+ K+G I A + ++ K + ++ LIS + + EA++IF+ M
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
KPD Y SL+S +V + A W+ + + + T LI+ + G + A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV-VANTVTYNTLINAFLRRGEIKEA 548
Query: 168 NKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
KL EM + D +Y S+I+GL G ++A LF KML +G P N + +++
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
+VEE + + M + S P + +++ L R+G++++ + + + E
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 138/315 (43%), Gaps = 52/315 (16%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDKA 72
++N ++ GL K + A K+ + M R D +++ +++G K+G + +A+ LF +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 73 PKRDAFLWSVLIS------------------------------------GYAQNGLPNEA 96
PK + +++ LI GY + GL A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 97 LKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--AL 154
L++ M KP+ Y L+ ++G +D A V L++ S D + + V L
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV---LNEMSADGLKPNTVGFNCL 465
Query: 155 IDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
I K + A ++F EMP++ D++++ S+I GL + A+ L M++EG+
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPE-HYACMVDLLSRSGQLKEA 269
+ + + ++ A ++E + M + S P E Y ++ L R+G++ +A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS--PLDEITYNSLIKGLCRAGEVDKA 583
Query: 270 YELLKSMPVESHASA 284
L + M + HA +
Sbjct: 584 RSLFEKMLRDGHAPS 598
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 129/315 (40%), Gaps = 56/315 (17%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASARA 67
E S+N ++ LV G A VF DM R + +F V++ + V +I SA +
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 68 LFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI--------- 114
L K ++ ++ LI ++ NEAL++ + M LM PD
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 115 ----------MVS----------------LMSACSQVGNLDLAKWVDCYLSQSSIDIGQT 148
MV+ LM+ ++G +D AK + + + I I T
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKR-----DLFSYCSMIQGLSIHGYAEQAVGLFN 203
LI G +D A + +M D+ +Y S+I G G A+ + +
Sbjct: 359 -----LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 204 KMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSR 262
M N+G P+ ++T+++ C G+ ++E + M + + P+ + C++ +
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGK-IDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCK 471
Query: 263 SGQLKEAYELLKSMP 277
++ EA E+ + MP
Sbjct: 472 EHRIPEAVEIFREMP 486
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 27/298 (9%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALF 69
+L S+N ++ L + + A V M E DVV+ + +I+G+ + + A L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 70 DKAP----KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
K + D +++ +I G + GL N+A+++F ME V+ D SL++
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVV------AALIDMNAKCGNMDRANKLFEEMPKR-- 177
G +W D ++ D+ +V A+ID+ K G A KL+EEM +R
Sbjct: 223 G-----RWSDA--ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275
Query: 178 --DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
D+F+Y S+I GL +HG ++A + + M+ +G +PD + ++ + V+EG
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALL-GAC 292
F M + +V Y ++ ++G+ A E+ M + + LL G C
Sbjct: 336 LFREMAQR-GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 142/300 (47%), Gaps = 24/300 (8%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGYAKVGDIASARAL- 68
N+ +N ++ K G++ +A+KVFD++ +R VVSF +I+GY KVG++ L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 69 --FDKAPKR-DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+K+ R D F +S LI+ + + A +F M + P++ I +L+ S+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD--RANKLFEEMPKR----DL 179
G +DL K + Y S + Q +V +N C N D A + + M +R D
Sbjct: 359 GEIDLMK--ESYQKMLSKGL-QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFE 238
+Y ++I G G E A+ + +M G+ D F+ ++ C GR+++ + E
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA---WGALL-GACKF 294
+++ + P Y M+D + G + ++LLK M + H + + LL G CK
Sbjct: 476 MLRA--GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 123/272 (45%), Gaps = 43/272 (15%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS----FTVMIDGYAKVGDI----ASA 65
++ +++A++ L K + A +FD+M +R ++ FT +I G+++ G+I S
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 66 RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ + K + D L++ L++G+ +NG A I GM ++PD+ +L+ +
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSM 185
G+++ A + + Q+ I++ D + ++
Sbjct: 429 GDVETALEIRKEMDQNGIEL--------------------------------DRVGFSAL 456
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSKY 244
+ G+ G A +ML G+ PD+ +T+++ A C G + G + M+S
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD-AQTGFKLLKEMQSD- 514
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
VPS Y +++ L + GQ+K A LL +M
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 52/264 (19%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASA---- 65
++ +N +V G K GDL+ AR + D M R D +++T +IDG+ + GD+ +A
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIR 438
Query: 66 RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ + + D +S L+ G + G +A + + M +KPD+ +M A +
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKK 498
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFS 181
G+ QT KL +EM + +
Sbjct: 499 GD------------------AQT------------------GFKLLKEMQSDGHVPSVVT 522
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
Y ++ GL G + A L + MLN G++PD+ + +L H R K Y + K
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQ--K 578
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQ 265
+ +V Y +V+ L R+ +
Sbjct: 579 PEIGIVADLASYKSIVNELDRASK 602
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 168/368 (45%), Gaps = 22/368 (5%)
Query: 1 DNAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVM 52
+ A R++ +M + + ++ ++ GL + G + +A K+F++M E +V V++ VM
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 53 IDGYAKVGDIASA----RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
I+GY + GD++ A + + +K D + + LI G G +EA G+ N
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
+ +E L+ + G L+ A V + Q +D+ LID + K +
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV-CYGVLIDGSLKHKDRKLFF 667
Query: 169 KLFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
L +EM R L Y SMI S G ++A G+++ M+NEG +P+ +T ++
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSG-QLKEAYELLKSM--PVESH 281
V E + M+ S VP+ Y C +D+L++ +++A EL ++ + ++
Sbjct: 728 CKAGFVNEAEVLCSKMQP-VSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLAN 786
Query: 282 ASAWGALL-GACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKN 340
+ + L+ G C+ E E++ + + + Y + + + + N
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 341 KMKERGLR 348
M E+G+R
Sbjct: 847 SMTEKGIR 854
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 149/356 (41%), Gaps = 57/356 (16%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARA-- 67
N +++ ++ + G L A +M + V + +I+G+ K GDI++A
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 68 --LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ +K + ++ L+ GY G N+AL+++ M + P Y +L+S +
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKR----DLF 180
G + A V + + ++ V +I+ + G+M +A + +EM ++ D +
Sbjct: 521 GLIRDA--VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 181 SYCSMIQGLSIHGYAEQA-------------------VGLFNKMLNEGLIPDNAAFT--- 218
SY +I GL + G A +A GL + EG + + +
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 219 ----VILTACSHGRLVE------EGKHYFETMKSKYSMVPSPEH--YACMVDLLSRSGQL 266
V L +G L++ + K +F +K + P+ Y M+D S++G
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 267 KEAYELLKSM----PVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
KEA+ + M V + + + G CK G V E++ ++ ++P +S P
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCK-AGFVNEAEVLCSK---MQPVSSVP 750
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 22/279 (7%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGYAKVGDIASARALF 69
N+ +N ++ GL K + A + D+ +D VV++ ++ G KV + +
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 70 DK------APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
D+ +P A S L+ G + G EAL + + + V P+ ++ +L+ +
Sbjct: 321 DEMLCLRFSPSEAAV--SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMP----KRD 178
+ A+ + + I + V + LIDM + G +D A EM K
Sbjct: 379 KGRKFHEAELL--FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYF 237
++ Y S+I G G A G +M+N+ L P +T ++ CS G++ + + Y
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
E M K + PS + ++ L R+G +++A +L M
Sbjct: 497 E-MTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 21/227 (9%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVF----DDMPER----DVVSFTVMIDGYAKVGDIASA 65
+L + ++ G +K D RK+F +M +R D V +T MID +K GD A
Sbjct: 646 DLVCYGVLIDGSLKHKD----RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 66 RALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
++D + + ++ +I+G + G NEA + M+ ++ P++ +
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI 761
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM----PKR 177
++ G +D+ K V+ + + + T LI + G ++ A++L M
Sbjct: 762 LTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
D +Y +MI L ++A+ L+N M +G+ PD A+ ++ C
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 158/349 (45%), Gaps = 24/349 (6%)
Query: 5 RVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVG 60
++FV + N ++N ++ GL A + D M + D+V++ V+++G K G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 61 DIASARALFDKAPKRD----AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMV 116
D A L +K + +++ +I G + ++AL +F+ ME ++P+
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 117 SLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK 176
SL+S G A + + + I+ +ALID K G + A KL++EM K
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 177 RDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE 232
R + +Y S+I G +H ++A +F M+++ PD + ++ + VEE
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 233 GKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALL 289
G F M S+ +V + Y ++ L ++G A E+ K M V + + LL
Sbjct: 415 GMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 290 -GACKFYGEVELGEIVANRL--FELEPENSSPYVLLSSIYAAA---DQW 332
G CK G++E +V L ++EP + +++ + A D W
Sbjct: 474 DGLCK-NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 144/325 (44%), Gaps = 31/325 (9%)
Query: 2 NAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMI 53
+A R+ M ER + +++A++ VK G L+ A K++D+M +R + V+++ +I
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 54 DGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G+ + A+ +F+ + F ++ LI G+ + E +++F+ M +
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ L+ Q G+ D+A+ + + + L+D K G +++A
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 170 LFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
+FE + + + ++Y MI+G+ G E LF + +G+ PD A+ +++
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 226 HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
EE F+ MK ++ P+ Y ++ R G + + EL+K M
Sbjct: 548 RKGSKEEADALFKEMKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKEMR-------- 598
Query: 286 GALLGACKFYGEVELGEIVANRLFE 310
+C F G+ +V N L +
Sbjct: 599 -----SCGFAGDASTIGLVTNMLHD 618
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 21/304 (6%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
E ++V+ + +++GY I+ A AL D+ + + ++ LI G + +EA+
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
+ M +PD +++ + G+ DLA + + Q ++ G + +ID
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG-VLIYNTIIDGL 266
Query: 159 AKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
K +MD A LF+EM + ++ +Y S+I L +G A L + M+ + PD
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 215 AAFTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
F+ ++ A G+LVE K Y E +K S+ PS Y+ +++ +L EA ++
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKR--SIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 274 KSMPVESH----ASAWGALL-GACKFYGEVELGEIVANRLFE--LEPENSSPYVLLSSIY 326
+ M V H + L+ G CK Y VE G V + + L + +L+ ++
Sbjct: 385 EFM-VSKHCFPDVVTYNTLIKGFCK-YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 327 AAAD 330
A D
Sbjct: 443 QAGD 446
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 18 WNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDKAP 73
+ +++G L + L A + F +M + D V +T +IDG+ K GDI +A F +
Sbjct: 762 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821
Query: 74 KRD----AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
RD ++ +ISG+ Q G EA K+F M ++PD L++ + G++
Sbjct: 822 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 130 LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK----RDLFSYCSM 185
A V ++ Q+ LID K G++D AN+L EM K ++F+Y S+
Sbjct: 882 DAFRVHNHMIQAGCS-PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 940
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSKY 244
+ GL G E+AV L + GL D +T ++ A C G + ++ + + M K
Sbjct: 941 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-DKAQEILKEMLGK- 998
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ P+ + +++ G L++ +LL M
Sbjct: 999 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 3 AKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMID 54
A + F +M R++T ++ A++ G + GD++ A K+F +M E D V+FT +I+
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872
Query: 55 GYAKVGDIASA----RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
GY K G + A + + ++ LI G + G + A ++ M + ++P
Sbjct: 873 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+ + S+++ + GN++ A + + ++ T L+D K G MD+A ++
Sbjct: 933 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN-ADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 171 FEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
+EM + L ++ ++ G +HG E L N ML +G+ P+ F ++
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 1051
Query: 227 GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
++ ++ M S+ + P + Y +V ++ +KEA+ L + M
Sbjct: 1052 RNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 21/292 (7%)
Query: 3 AKRVFVQMPERNLT----SWNAMVGGLVKGG-DLINARKVFDDMPER----DVVSFTVMI 53
A+RVF +M L S N + L K A VF + PE +V S+ ++I
Sbjct: 637 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 696
Query: 54 DGYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
++G I A L K D +S +++GY + G ++ K+ + M+ +K
Sbjct: 697 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 756
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P+ YI S++ ++ L A+ + + I + T V LID K G++ A+K
Sbjct: 757 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASK 815
Query: 170 LFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-C 224
F EM RD+ +Y ++I G G +A LF++M +GL PD+ FT ++ C
Sbjct: 816 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
G + + + + +++ S P+ Y ++D L + G L A ELL M
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSANELLHEM 925
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 18 WNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDKAP 73
+ +++G L + L A + F +M + D V +T +IDG+ K GDI +A F +
Sbjct: 762 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821
Query: 74 KRD----AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD 129
RD ++ +ISG+ Q G EA K+F M ++PD L++ + G++
Sbjct: 822 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 130 LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK----RDLFSYCSM 185
A V ++ Q+ LID K G++D AN+L EM K ++F+Y S+
Sbjct: 882 DAFRVHNHMIQAGCS-PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 940
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSKY 244
+ GL G E+AV L + GL D +T ++ A C G + ++ + + M K
Sbjct: 941 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-DKAQEILKEMLGK- 998
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ P+ + +++ G L++ +LL M
Sbjct: 999 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 3 AKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMID 54
A + F +M R++T ++ A++ G + GD++ A K+F +M E D V+FT +I+
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872
Query: 55 GYAKVGDIASA----RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
GY K G + A + + ++ LI G + G + A ++ M + ++P
Sbjct: 873 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
+ + S+++ + GN++ A + + ++ T L+D K G MD+A ++
Sbjct: 933 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN-ADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 171 FEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
+EM + L ++ ++ G +HG E L N ML +G+ P+ F ++
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 1051
Query: 227 GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
++ ++ M S+ + P + Y +V ++ +KEA+ L + M
Sbjct: 1052 RNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 21/292 (7%)
Query: 3 AKRVFVQMPERNLT----SWNAMVGGLVKGG-DLINARKVFDDMPER----DVVSFTVMI 53
A+RVF +M L S N + L K A VF + PE +V S+ ++I
Sbjct: 637 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 696
Query: 54 DGYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
++G I A L K D +S +++GY + G ++ K+ + M+ +K
Sbjct: 697 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 756
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
P+ YI S++ ++ L A+ + + I + T V LID K G++ A+K
Sbjct: 757 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASK 815
Query: 170 LFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-C 224
F EM RD+ +Y ++I G G +A LF++M +GL PD+ FT ++ C
Sbjct: 816 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
G + + + + +++ S P+ Y ++D L + G L A ELL M
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSANELLHEM 925
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 165/371 (44%), Gaps = 39/371 (10%)
Query: 1 DNAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D+A+ +F +M + + S+ ++ G K G++ A +FD+M E +V+ + ++
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 53 IDGYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+ G+ + G+I A+ L D K +A + +I GY ++G EA ++F M+L +
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
PD ++ +L+ C ++ D+ + + + + T ALI+ K G +
Sbjct: 729 VPDSFVYTTLVDGCCRLN--DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 169 KL--------FEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
++ F+ K + +Y MI L G E A LF++M N L+P +T +
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 221 LTACSH-GRLVEEGKHYFETMKSKYSMVPSPEH--YACMVDLLSRSGQLKEAYELLKSMP 277
L GR E F + P+H Y+ +++ + G +A L+ M
Sbjct: 847 LNGYDKMGRRAE----MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 278 VESHA--------SAWGALLGACKFYGEVELGEIVANRLFELE--PENSSPYVLLSSIYA 327
++ S ALL GE+E+ E V + L+ P++++ L++
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCI 962
Query: 328 AADQWLDVSHV 338
+++Q ++ V
Sbjct: 963 SSNQRVEADAV 973
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 23/304 (7%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
N+ + ++ ++ +A +V +M E+ D+ + +I G +K + AR+
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 70 ----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ K +AF + ISGY + A K + M V P++ + L++ +
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 126 GNLDLAKWVDCYLSQSSID---IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----D 178
G + A C +S +D +G L++ K +D A ++F EM + D
Sbjct: 571 GKVIEA----CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+FSY +I G S G ++A +F++M+ EGL P+ + ++L +E+ K +
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES---HASAWGALLGACKFY 295
M K + P+ Y ++D +SG L EA+ L M ++ + + L+ C
Sbjct: 687 EMSVK-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 296 GEVE 299
+VE
Sbjct: 746 NDVE 749
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 139/292 (47%), Gaps = 19/292 (6%)
Query: 1 DNAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVM 52
D A+ V+M E L ++ A + G ++ + +A K +M E V V T +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 53 IDGYAKVGDIASA----RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
I+ Y K G + A R++ D+ DA ++VL++G +N ++A +IF+ M +
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
PD + L++ S++GN+ A + + + + + L+ + G +++A
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL-TPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 169 KLFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+L +EM + L +YC++I G G +A LF++M +GL+PD+ +T ++ C
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
VE F T K + +P + +++ + + G+ + E+L +
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAP--FNALINWVFKFGKTELKTEVLNRL 792
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 22/249 (8%)
Query: 37 VFDDMPERDVV----SFTVMIDGYAKVGDIASARALFDKAPKRDAFLWSVL-ISGYAQNG 91
V+ M ER+VV ++ ++I + + G++ + + K K F + L + G
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE--FRTATLNVDG----- 260
Query: 92 LPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV 151
ALK+ + M + P +Y L+ ++ L+ AK + + + + H
Sbjct: 261 ----ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL-DNHTY 315
Query: 152 AALIDMNAKCGNMDRANKLFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLN 207
+ LID K N D A L EM + + Y I +S G E+A LF+ M+
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 208 EGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLK 267
GLIP A+ ++ + V +G MK K ++V SP Y +V + SG L
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK-KRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 268 EAYELLKSM 276
AY ++K M
Sbjct: 435 GAYNIVKEM 443
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 152/333 (45%), Gaps = 35/333 (10%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
+A R+ M ER N+ +++A++ VK G L+ A K++D+M +R D+ +++ +I
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 54 DGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G+ + A+ +F+ +D F ++ LI G+ + E +++F+ M +
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSI--DIGQTHVVAALIDMNAKCGNMDRA 167
+ +L+ Q G+ D+A+ + + + DI + L+D K G +++A
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI---LLDGLCKYGKLEKA 484
Query: 168 NKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+FE + K D+++Y MI+G+ G E LF + +G+ P+ +T +++
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
L EE F MK ++ P+ Y ++ R G + EL+K M
Sbjct: 545 FCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRARLRDGDKAASAELIKEMR------ 597
Query: 284 AWGALLGACKFYGEVELGEIVANRLFELEPENS 316
+C F G+ +V N L + E S
Sbjct: 598 -------SCGFVGDASTISMVINMLHDGRLEKS 623
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 144/296 (48%), Gaps = 55/296 (18%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
++A +F +M + N+ ++N+++ L G +A ++ DM ER +VV+F+ +
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
ID + K G + A L+D+ KR D F +S LI+G+ + +EA +F ELM
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF---ELMIS 388
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
K DC+ + + + LI K ++
Sbjct: 389 K-------------------------DCFPNVVTYN--------TLIKGFCKAKRVEEGM 415
Query: 169 KLFEEMPKRDLF----SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA- 223
+LF EM +R L +Y ++IQGL G + A +F KM+++G+ PD ++++L
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
C +G+L E+ FE ++ K M P Y M++ + ++G++++ ++L S+ ++
Sbjct: 476 CKYGKL-EKALVVFEYLQ-KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 135/297 (45%), Gaps = 20/297 (6%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALF 69
+L S+N ++ + L A V M E D+V+ + +++GY I+ A AL
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 70 DK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
D+ + + ++ LI G + +EA+ + M +PD + ++++ +
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFS 181
G++DLA + + + I+ + +ID N++ A LF EM + ++ +
Sbjct: 234 GDIDLALSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETM 240
Y S+I+ L +G A L + M+ + P+ F+ ++ A G+LVE K Y E +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEA---YELLKSMPVESHASAWGALL-GACK 293
K S+ P Y+ +++ +L EA +EL+ S + + L+ G CK
Sbjct: 353 KR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 21/279 (7%)
Query: 8 VQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIA 63
+Q+P +++ ++GGL K G L VF++M + +V +TV+IDGYAK G +
Sbjct: 323 IQVPPH---AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 64 SA----RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLM 119
A + D+ K D +SV+++G +NG EAL F + + SL+
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLI 439
Query: 120 SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD- 178
+ G +D A+ + +S+ ++ ALID K +D A LF+ M + +
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKGC-TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG 498
Query: 179 ----LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEG 233
+++Y ++ G+ E+A+ L++ M+++G+ P A F + T C G++
Sbjct: 499 CDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARAC 558
Query: 234 KHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
K E + + E M++ L ++G++KEA +L
Sbjct: 559 KILDELAPMGVILDAACED---MINTLCKAGRIKEACKL 594
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 146/309 (47%), Gaps = 22/309 (7%)
Query: 35 RKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAP----KRDAFLWSVLISGYAQN 90
RK+ ++ E + ++ +++G + SA +F+ K D ++ +I GY +
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 91 GLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY--LSQSSIDIGQT 148
G +A++ + ME + D+ ++++ AC + D V Y + + I +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQAC--YADSDFGSCVALYQEMDEKGIQV-PP 327
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNK 204
H + +I K G ++ +FE M ++ ++ Y +I G + G E A+ L ++
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 205 MLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRS 263
M++EG PD ++V++ C +GR VEE YF T + + + Y+ ++D L ++
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGR-VEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKA 445
Query: 264 GQLKEAYELLKSMP---VESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPY- 319
G++ EA L + M + + AL+ A + +V+ + R+ E E + + Y
Sbjct: 446 GRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYT 505
Query: 320 --VLLSSIY 326
+LLS ++
Sbjct: 506 YTILLSGMF 514
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 136/330 (41%), Gaps = 58/330 (17%)
Query: 1 DNAKRVFVQMP----ERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D+A+RVF M + ++ ++N M+ G K G A + DM R D +++ M
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 53 IDGYAKVGDIASARALFD---------------------------------------KAP 73
I D S AL+ K
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLD--LA 131
K + +++VLI GYA++G +A+++ M KPD +++ + G ++ L
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 132 KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK----RDLFSYCSMIQ 187
+ C +I+ + ++LID K G +D A +LFEEM + RD + Y ++I
Sbjct: 419 YFHTCRFDGLAIN---SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 188 GLSIHGYAEQAVGLFNKM-LNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSM 246
+ H ++A+ LF +M EG +T++L+ EE ++ M K +
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK-GI 534
Query: 247 VPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
P+ + + L SG++ A ++L +
Sbjct: 535 TPTAACFRALSTGLCLSGKVARACKILDEL 564
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 164/366 (44%), Gaps = 29/366 (7%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMP-------ERDVVSFTVMIDGYAK---VGD 61
E ++ S+N+++ G + GD+ +A V + + + D+VSF + +G++K + +
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE 147
Query: 62 IASARALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA 121
+ + K + +S I + ++G ALK F M+ + P+ L+
Sbjct: 148 VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 122 CSQVGNLDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKRDL- 179
+ G+L++A V Y + + V ALID K G M RA +++ M + +
Sbjct: 208 YCKAGDLEVA--VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Query: 180 ---FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKH 235
Y ++I G G ++ A+ KMLN+G+ D A+ VI++ C +G+L +E
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL-KEATE 324
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA---YELLKSMPVESHASAWGALLGAC 292
E M+ K +VP + M++ +SG++K A Y L E A ++
Sbjct: 325 IVEDME-KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383
Query: 293 KFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL--RKL 350
G +L E + F +E N Y +L +++V + +K+ E GL K
Sbjct: 384 AKNG--QLHEAIV--YFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF 439
Query: 351 PGCSWI 356
SWI
Sbjct: 440 MYTSWI 445
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 42/304 (13%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASARA-- 67
N+ ++ A++ G K G++ A +++ M E V + +T +IDG+ + GD +A
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 68 --LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ ++ + D + V+ISG NG EA +I + ME ++ PD I ++M+A +
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 126 GNLDLA-----KWV------DCYLSQSSID----IGQTH--------------VVAALID 156
G + A K + D + ID GQ H + LID
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLID 411
Query: 157 MNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIP 212
K G+ +LF ++ + D F Y S I GL G A L +M+ EGL+
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 213 DNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL 272
D A+T ++ + L+ E + F+ M + + P + ++ + G + A +L
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNS-GISPDSAVFDLLIRAYEKEGNMAAASDL 530
Query: 273 LKSM 276
L M
Sbjct: 531 LLDM 534
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 122/239 (51%), Gaps = 22/239 (9%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS----FTVM 52
DNA + +M + ++T++ ++ GL G L A ++ +DM + D+V FT M
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
++ Y K G + +A ++ K +R D S +I G A+NG +EA+ ++ +E
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIE---- 399
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
K ++ + L+ A + G+ + + +S++ + + + + I K GN+ A
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGL-VPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
KL M + DL +Y ++I GL+ G +A +F++MLN G+ PD+A F +++ A
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 148/327 (45%), Gaps = 35/327 (10%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
+A ++ M E+ NL ++NA++ VK G + A K++DDM +R D+ ++ ++
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 54 DGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G+ + A+ +F+ +D F ++ LI G+ ++ + ++F+ M +
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRA 167
D +L+ G+ D A+ V Q D ++ I ++ C G +++A
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKV---FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 168 NKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
++F+ M K D++ Y +MI+G+ G + LF + +G+ P+ + +++
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
RL++E + MK + P+ Y ++ R G + EL++ M
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREMR------ 602
Query: 284 AWGALLGACKFYGEVELGEIVANRLFE 310
+C+F G+ +VAN L +
Sbjct: 603 -------SCRFVGDASTIGLVANMLHD 622
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 27/288 (9%)
Query: 8 VQMPER-NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDI 62
V+M R + ++ ++ GL A + D M +R ++V++ V+++G K GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 63 ASARALFDKAP----KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
A L +K + D +++ +I + ++AL +F+ ME ++P+ SL
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV------VAALIDMNAKCGNMDRANKLFE 172
+S G +W D SQ D+ + + ALID K G A KL++
Sbjct: 302 ISCLCSYG-----RWSDA--SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 173 EMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
+M KR D+F+Y S++ G +H ++A +F M+++ PD + ++ +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
VE+G F M S +V Y ++ L G A ++ K M
Sbjct: 415 RVEDGTELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 46/236 (19%)
Query: 1 DNAKRVFVQMPERN----LTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D AK++F M ++ + ++N ++ G K + + ++F +M R D V++T +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 53 IDGYAKVGDIASARALF-----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
I G GD +A+ +F D P D +S+L+ G NG +AL++F M+
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
+K D YI +++ + G +D + C LS +
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV------------------------ 536
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
K ++ +Y +MI GL ++A L KM +G +P++ + ++ A
Sbjct: 537 --------KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 30/247 (12%)
Query: 48 SFTVMIDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGM 103
++ ++I+ + + I+ A AL K K S L++GY ++A+ + M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 104 ELMNVKPDEYIMVSLM-------SACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALID 156
M +PD +L+ A V +D C Q ++V +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC----------QPNLVTYGVV 231
Query: 157 MNAKC--GNMDRANKLFEEMP----KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGL 210
+N C G+ D A L +M + D+ + ++I L + + + A+ LF +M +G+
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 211 IPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
P+ ++ +++ CS+GR + + + ++ K + P+ + ++D + G+ EA
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN--PNLVTFNALIDAFVKEGKFVEA 349
Query: 270 YELLKSM 276
+L M
Sbjct: 350 EKLYDDM 356
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 152/344 (44%), Gaps = 17/344 (4%)
Query: 16 TSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDGYAKVGDIASARALFDKAPKR 75
+++N + L G + +AR++ M DVVS+ ++ GY K+G A LFD
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 403
Query: 76 D----AFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA 131
D ++ LI G ++G A ++ + M + PD +L+ + GNL +A
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Query: 132 KWV-DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR-----DLFSYCSM 185
V D L + G + A+ ++ + G+ D+A +L EEM DL Y
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGEL--RLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYS 245
I GL G +A+ K+ GL+PD+ +T ++ + ++ ++ M K
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK-R 580
Query: 246 MVPSPEHYACMVDLLSRSGQLKEAYEL---LKSMPVESHASAWGALL-GACKFYGEVELG 301
+ PS Y ++ +++G+L++A++ +K V + ALL G CK E
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 302 EIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKER 345
+ E P N Y +L S ++W +V + +M ++
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 136/291 (46%), Gaps = 13/291 (4%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGY 56
D+A+ + M ++ S+N ++ G +K G + A +FDD+ D +V++ +IDG
Sbjct: 360 DDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 57 AKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
+ G++ A+ L ++ + D ++ L+ G+ +NG + A +++ M +KPD
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA----N 168
Y + ++G+ D A + + + + ID K GN+ +A
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
K+F D +Y ++I+G +G + A L+++ML + L P + V++ +
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
+E+ Y MK K + P+ + ++ + ++G + EAY L M E
Sbjct: 600 RLEQAFQYSTEMK-KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 171/393 (43%), Gaps = 64/393 (16%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASA 65
MP + ++N M+ K GDL K++ +M R++ V++ ++I+G++K G + A
Sbjct: 235 MP--TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 66 RALFDKAPKRDAFL-----WSVLISGYAQNGLPNEALKIFQGMELMNVKP---------- 110
R F +R F ++ LI GY + GL ++A + M + P
Sbjct: 293 RR-FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 111 ---------DEYIMVSLMSACSQV-------GNLDLAKWVDCYLSQSSIDIGQTH----V 150
D ++S M+A V G + + K+V+ L + G H
Sbjct: 352 ALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
LID + GN++ A +L EEM + D+ +Y ++++G +G A ++++ML
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHY--FETMKSKYSMVPSPEHYACMVDLLSRSG 264
+G+ PD A+T A RL + K + E M + P Y +D L + G
Sbjct: 472 RKGIKPDGYAYTT--RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Query: 265 QLKEAYELLKSM----PVESHASAWGALLGACKFYGEVELG-----EIVANRLFELEPEN 315
L +A E + + V H + + G + G+ ++ E++ RL+ P
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE-NGQFKMARNLYDEMLRKRLY---PSV 585
Query: 316 SSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
+ +VL+ +A A + +MK+RG+R
Sbjct: 586 ITYFVLIYG-HAKAGRLEQAFQYSTEMKKRGVR 617
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 141/297 (47%), Gaps = 21/297 (7%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGY 56
D +R VQ P+R ++N+++ +GG AR +FD+M E+DV S+ ++D
Sbjct: 328 DEMQRNGVQ-PDR--ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 57 AKVGDIASARALFDKAP-KR---DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
K G + A + + P KR + +S +I G+A+ G +EAL +F M + + D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 113 YIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLF 171
+L+S ++VG + A +D +S+ I + V AL+ K G D K+F
Sbjct: 445 VSYNTLLSIYTKVGRSEEA--LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 172 EEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
EM + +L +Y ++I G S G ++A+ +F + + GL D ++ ++ A
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA--YELLKSMPVESHA 282
LV + M +K + P+ Y ++D RS + + Y S+P S A
Sbjct: 563 GLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSA 618
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 146/316 (46%), Gaps = 23/316 (7%)
Query: 50 TVMIDGYAKVGDIASARALFDKAPK----RDAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
+ MI + G + A+ +F+ A + +S LIS Y ++GL EA+ +F M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 106 MNVKPDEYIMVSLMSACSQVGN--LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGN 163
++P+ +++ AC + G +AK+ D + ++ + + +L+ + ++ G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD-EMQRNGVQPDRI-TFNSLLAVCSRGGL 354
Query: 164 MDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
+ A LF+EM R D+FSY +++ + G + A + +M + ++P+ +++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 220 ILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP-- 277
++ + +E + F M+ + Y ++ + ++ G+ +EA ++L+ M
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMR-YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 278 -VESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYVLLSSI----YAAADQW 332
++ + ALLG YG+ + V E++ E+ P +L S Y+ +
Sbjct: 474 GIKKDVVTYNALLGG---YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 333 LDVSHVKNKMKERGLR 348
+ + + K GLR
Sbjct: 531 KEAMEIFREFKSAGLR 546
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 98/256 (38%), Gaps = 63/256 (24%)
Query: 147 QTHVVAALIDMNAKCGNMDRANKLFEEMPK----RDLFSYCSMIQGLSIHGYAEQAVGLF 202
Q + +A+I + G + A ++FE ++++ ++I G E+A+ +F
Sbjct: 232 QGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVF 291
Query: 203 N------------------------------------KMLNEGLIPDNAAFTVILTACSH 226
N +M G+ PD F +L CS
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 227 GRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE------- 279
G L E ++ F+ M ++ + Y ++D + + GQ+ A+E+L MPV+
Sbjct: 352 GGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV 410
Query: 280 SHASAWGALLGACKF------YGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWL 333
S+++ A +F +GE+ I +R+ Y L SIY +
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV---------SYNTLLSIYTKVGRSE 461
Query: 334 DVSHVKNKMKERGLRK 349
+ + +M G++K
Sbjct: 462 EALDILREMASVGIKK 477
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 146/327 (44%), Gaps = 35/327 (10%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
+A ++ M E+ NL ++NA++ VK G + A K+ DDM +R D+ ++ +I
Sbjct: 237 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296
Query: 54 DGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G+ + A+ +F+ +D F ++ LI G+ ++ + ++F+ M +
Sbjct: 297 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 356
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRA 167
D +L+ G+ D A+ V Q D ++ I ++ C G +++A
Sbjct: 357 GDTVTYTTLIQGLFHDGDCDNAQKV---FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 413
Query: 168 NKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
++F+ M K D++ Y +MI+G+ G + LF + +G+ P+ + +++
Sbjct: 414 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 473
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
RL++E + MK + P Y ++ R G + EL++ M
Sbjct: 474 LCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMR------ 526
Query: 284 AWGALLGACKFYGEVELGEIVANRLFE 310
+C+F G+ +VAN L +
Sbjct: 527 -------SCRFVGDASTIGLVANMLHD 546
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 27/288 (9%)
Query: 8 VQMPER-NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDI 62
V+M R + ++ ++ GL A + D M +R ++V++ V+++G K GDI
Sbjct: 106 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 165
Query: 63 ASARALFDKAP----KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSL 118
A L +K + D +++ +I + ++AL +F+ ME ++P+ SL
Sbjct: 166 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 225
Query: 119 MSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV------VAALIDMNAKCGNMDRANKLFE 172
+S G +W D SQ D+ + + ALID K G A KL +
Sbjct: 226 ISCLCSYG-----RWSDA--SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 278
Query: 173 EMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
+M KR D+F+Y S+I G +H ++A +F M+++ PD + ++ +
Sbjct: 279 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 338
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
VE+G F M S +V Y ++ L G A ++ K M
Sbjct: 339 RVEDGTELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 385
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 14/275 (5%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALF 69
NL ++ +V GL K GD+ A + + M E DVV F +ID K + A LF
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 70 D----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
K + + +S LIS G ++A ++ M + P+ +L+ A +
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF----S 181
G A+ + + + SID +LI+ +D+A ++FE M +D F +
Sbjct: 268 GKFVEAEKLHDDMIKRSID-PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 326
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
Y ++I+G E LF +M + GL+ D +T ++ H + + F+ M
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
S + P Y+ ++D L +G+L++A E+ M
Sbjct: 387 SD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 46/236 (19%)
Query: 1 DNAKRVFVQMPERN----LTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D AK++F M ++ L ++N ++ G K + + ++F +M R D V++T +
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365
Query: 53 IDGYAKVGDIASARALF-----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
I G GD +A+ +F D P D +S+L+ G NG +AL++F M+
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
+K D YI +++ + G +D + C LS +
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV------------------------ 460
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
K ++ +Y +MI GL ++A L KM +G +PD+ + ++ A
Sbjct: 461 --------KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 508
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 137/326 (42%), Gaps = 57/326 (17%)
Query: 2 NAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYA 57
N+K F P N+ + N +V L K D+ +A KV D++P ++V++T ++ GY
Sbjct: 180 NSKESFGITP--NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 58 KVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
GD+ SA+ + ++ R DA ++VL+ GY + G +EA + ME ++P+E
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEE 173
++ A + K G A +F+E
Sbjct: 298 TYGVMIRALCK---------------------------------EKKSG---EARNMFDE 321
Query: 174 MPKRDLFS----YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF-TVILTACSHGR 228
M +R C +I L ++A GL+ KML +PDNA T+I C GR
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAW 285
+ E K + E K +PS Y ++ + G+L EA L M + +A +
Sbjct: 382 VTEARKLFDEFEKGS---IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTY 438
Query: 286 GALLGACKFYGEVELGEIVANRLFEL 311
L+ G V+ G V + E+
Sbjct: 439 NVLIEGLSKNGNVKEGVRVLEEMLEI 464
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 18/237 (7%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVM 52
++AKRV +M +R + T++ ++ G K G A V DDM + ++ V++ VM
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
I K AR +FD+ +R D+ L +I ++ +EA +++ M N
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
PD ++ +L+ + G + A+ + + SI T+ LI + G + A
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTY--NTLIAGMCEKGELTEAG 420
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
+L+++M +R + F+Y +I+GLS +G ++ V + +ML G P+ F ++
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 10 MPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDV---VSFTVMIDGYAKVGDIASAR 66
MP+ L S ++ L K G + ARK+FD+ + + +++ +I G + G++ A
Sbjct: 363 MPDNALLS--TLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 67 ALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
L+D + K +AF ++VLI G ++NG E +++ + M + P++ + L
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Query: 123 SQVG 126
++G
Sbjct: 481 QKLG 484
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 145/325 (44%), Gaps = 31/325 (9%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
+A R+ M ER N+ +++A++ VK G L+ A K++D+M +R D+ +++ +I
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 54 DGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G+ + A+ +F+ +D F ++ LI G+ + +E +++F+ M +
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANK 169
+ +L+ Q D A+ V + + + + L+D G ++ A
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV-LPDIMTYSILLDGLCNNGKVETALV 487
Query: 170 LFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACS 225
+FE + + D+++Y MI+G+ G E LF + +G+ P+ +T +++
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 226 HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAW 285
L EE F MK + + P Y ++ R G + EL++ M
Sbjct: 548 RKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMR-------- 598
Query: 286 GALLGACKFYGEVELGEIVANRLFE 310
+C+F G+ +V N L +
Sbjct: 599 -----SCRFVGDASTIGLVTNMLHD 618
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 136/297 (45%), Gaps = 20/297 (6%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALF 69
NL +++ ++ + L A V M E D+V+ +++G+ I+ A +L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 70 DK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ + D+F ++ LI G ++ +EA+ + M + +PD +++ +
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFS 181
G++DLA + + Q I+ G + +ID N++ A LF EM + ++ +
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVV-IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETM 240
Y S+I+ L +G A L + M+ + P+ F+ ++ A G+LVE K Y E +
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEA---YELLKSMPVESHASAWGALL-GACK 293
K S+ P Y+ +++ +L EA +EL+ S + + L+ G CK
Sbjct: 354 KR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 145/295 (49%), Gaps = 21/295 (7%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
++ S++ ++ L K G L +A ++FD+M ER DV + ++IDG+ K D +A L+
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 70 DKAPKRDAF-----LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
D+ + + +++ISG ++ G ++ LKI++ M+ + D Y SL+
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 125 VGNLDLAKWVDCYLSQ--SSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR---DL 179
GN+D A+ V L + +SID+ + ++ +CG + + +L+ M + ++
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYN---TMLGGFCRCGKIKESLELWRIMEHKNSVNI 359
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
SY +I+GL +G ++A ++ M +G D + + + V + +
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP---VESHASAWGALLGA 291
++S + YA ++D L + +L+EA L+K M VE ++ AL+G
Sbjct: 420 VESSGGHLDVYA-YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 27/304 (8%)
Query: 1 DNAKRVFVQMPE-----RNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV----SFTV 51
D A VF +M E + S+N ++ V+ + +F V ++ V
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 52 MIDGYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
+I K + AR D + K D F +S +I+ A+ G ++AL++F M
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAK--WVDCYLSQSSIDIG-QTHVVAALIDMNAKCGNM 164
V PD L+ + + A W D L SS+ +TH + +I +KCG +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELW-DRLLEDSSVYPNVKTHNI--MISGLSKCGRV 271
Query: 165 DRANKLFEEMPK----RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
D K++E M + +DL++Y S+I GL G ++A +FN++ D + +
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 221 LTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
L C G+ ++E + M+ K S+ + Y ++ L +G++ EA + + MP +
Sbjct: 332 LGGFCRCGK-IKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 280 SHAS 283
+A+
Sbjct: 389 GYAA 392
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 11/237 (4%)
Query: 83 LISGYAQNGLPNEALKIFQGM-ELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQS 141
+I Y +N +P++AL +F+ M E+ +P +L++A + + + Y +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 142 SIDIG-QTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAE 196
+ QT+ V LI M+ K ++A + M K D+FSY ++I L+ G +
Sbjct: 144 GVAPNLQTYNV--LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 197 QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACM 256
A+ LF++M G+ PD + +++ + + ++ + S+ P+ + + M
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
Query: 257 VDLLSRSGQLKEA---YELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRLFE 310
+ LS+ G++ + +E +K E + +L+ G V+ E V N L E
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARA 67
E N NA++GGL++ L A +M + VVS+ ++I G K G A A
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 68 ----LFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
+ + K D +S+L+ G ++ + AL+++ ++ D + L+
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA------KCGNMDRANKLFEEMPKR 177
VG LD A V ++ + A L+ N K G+ +RA ++ M K
Sbjct: 581 SVGKLDDAMTV-------MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM 633
Query: 178 ----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
D+ SY ++++GL + A+ F+ N G+ P + +++ A
Sbjct: 634 GLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 140/310 (45%), Gaps = 26/310 (8%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASARALF 69
NL ++ ++ GL K G +A+K+FDDM R + V++T++I G + G AR LF
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 70 DKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ D+ + L+ G+ + G ++ + EL+ + + ++ L S +
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLG------RMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 126 GNLDLAKW----VDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKR--- 177
L A+ + Y + +I ++ LI +K G ++ A KL MP +
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 178 -DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHY 236
D + Y ++I+ L G E+ L +M PD T+++ + LV E +
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 237 FETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGAL--LGACKF 294
F ++ K PS + ++D L +SG+LKEA LL M V AS + L G F
Sbjct: 431 FTEIE-KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSF 489
Query: 295 YGEVELGEIV 304
VE G I+
Sbjct: 490 DTMVESGSIL 499
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 22/304 (7%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIF 100
++ +F +++DG K G + A+ +FD R + +++LISG Q G ++A K+F
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 101 QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAK 160
M+ PD +L+ ++G + A + + +G ++LID +
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG-LRGYSSLIDGLFR 315
Query: 161 CGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAA 216
+A +L+ M K+ D+ Y +IQGLS G E A+ L + M ++G+ PD
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 217 FTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKS 275
+ ++ A C G L+EEG+ + S+ P + ++ + R+G ++EA E+
Sbjct: 376 YNAVIKALCGRG-LLEEGRS-LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 276 MP---VESHASAWGALL-GACKFYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQ 331
+ + + AL+ G CK GE+ RL + E P L + + ++
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKS------GELKEARLLLHKMEVGRPASLFLRLSHSGNR 487
Query: 332 WLDV 335
D
Sbjct: 488 SFDT 491
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 76 DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY---IMVSLMSACSQVGNLDLAK 132
D++ + VLIS YA+ G+ +A++ F M+ + +PD + +++ +M L A
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 133 WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDL----FSYCSMIQG 188
+ + S ++ + L+D K G A K+F++M R + +Y +I G
Sbjct: 186 YNEMLKCNCSPNL---YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 189 LSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMK--SKYS 245
L G A+ A LF +M G PD+ A +L C GR+VE FE ++ K
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEA----FELLRLFEKDG 298
Query: 246 MVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
V Y+ ++D L R+ + +A+EL +M
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 119/322 (36%), Gaps = 50/322 (15%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAPKRDA--------------------------- 77
D F V+I YAK+G A F + + D
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 78 -------------FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
+ + +L+ G + G ++A K+F M + P+ L+S Q
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLF 180
G+ D A+ + Y Q+S + + AL+D K G M A +L K L
Sbjct: 246 RGSADDARKL-FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
Y S+I GL QA L+ ML + + PD +T+++ S +E+ +M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL-LKSMPVESHASAWGALLGACKFYGEVE 299
SK + P Y ++ L G L+E L L+ ES A + C
Sbjct: 365 PSK-GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423
Query: 300 LGEIVANRLF-ELEPENSSPYV 320
+ E A +F E+E SP V
Sbjct: 424 VRE--AEEIFTEIEKSGCSPSV 443
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 64/309 (20%)
Query: 3 AKRVFVQMPER----NLTSWNAMVGGLVKGGDLINAR----------------------- 35
A+ +F ++ + ++ ++NA++ GL K G+L AR
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 36 KVFDDMPER--------------------DVVSFTVMIDGYAKVGDIASARALFD----K 71
+ FD M E D+VS+ V+I+G+ + GDI A L + K
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 72 APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS-ACSQVGNL-D 129
D+ ++ LI+G + G EA K+F + P Y SLM+ +C + L
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVY--RSLMTWSCRKRKVLVA 604
Query: 130 LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD----LFSYCSM 185
W+ YL + S +T A I+ K G +RA + E+ R L Y
Sbjct: 605 FNLWMK-YLKKISCLDDET---ANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW 660
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEG-LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
+ GL G +A+ +F+ + + L+ + +I C +L + + T+ + +
Sbjct: 661 LIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNF 720
Query: 245 SMVPSPEHY 253
++P +Y
Sbjct: 721 KLMPRVCNY 729
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 144/315 (45%), Gaps = 20/315 (6%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
+A R+ M ER N+ +++A++ VK G L+ A K++D+M +R D+ +++ +I
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 54 DGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G+ + A+ +F+ +D F +S LI G+ + E +++F+ M +
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRAN 168
+ +L+ Q + D A+ V + S+ + + L+D K G + +A
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMV--FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+FE + + D+++Y MI+G+ G E LF + +G+ P+ A+ +++
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA 284
EE + MK + P+ Y ++ R G + + EL+K M A
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Query: 285 WGALLGACKFYGEVE 299
+ + KF E+E
Sbjct: 608 ASTIGLSSKFKREIE 622
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 138/293 (47%), Gaps = 20/293 (6%)
Query: 1 DNAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D+A +F +M + + ++++++ L G +A ++ DM ER +VV+F+ +
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
ID + K G + A L+D+ KR D F +S LI+G+ + +EA +F+ M +
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
P+ +L+ + ++ + +SQ + +G T LI + + D A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 169 KLFEEMPK----RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA- 223
+F++M ++ +Y ++ GL +G +A+ +F + + PD + +++
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
C G+ VE+G F + K + P+ Y M+ R G +EA LLK M
Sbjct: 514 CKAGK-VEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 16/264 (6%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
E D+V+ + +++GY I+ A AL D+ K D F ++ LI G + +EA+
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
+ M +PD ++++ + G++DLA + + + I+ + +ID
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYNTIIDGL 268
Query: 159 AKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
K +MD A LF EM + D+F+Y S+I L +G A L + M+ + P+
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 215 AAFTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA---Y 270
F+ ++ A G+LVE K Y E +K S+ P Y+ +++ +L EA +
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 271 ELLKSMPVESHASAWGALL-GACK 293
EL+ S + + L+ G CK
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCK 410
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 30/302 (9%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
+ ++ ++ GL A + D M +R D+V++ +++G K GD A L
Sbjct: 787 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 846
Query: 70 DK--APKRDA--FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+K A K +A ++S +I + ++AL +F ME V+P+ SL+S
Sbjct: 847 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 906
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHV------VAALIDMNAKCGNMDRANKLFEEMPKR-- 177
G +W D S+ D+ + + +ALID K G + +A KL+EEM KR
Sbjct: 907 G-----RWSDA--SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 959
Query: 178 --DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
++F+Y S+I G + +A + M+ + +P+ + ++ + V++G
Sbjct: 960 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 1019
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALL-GA 291
F M S+ +V + Y ++ ++ A + K M V + + LL G
Sbjct: 1020 LFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 1078
Query: 292 CK 293
CK
Sbjct: 1079 CK 1080
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
E D+V+ +++G+ I+ A AL D+ K D ++ LI G + +EA+
Sbjct: 750 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 809
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
+ M +PD ++++ + G+ DLA + + + I+ + + +ID
Sbjct: 810 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE-ANVVIYSTVIDSL 868
Query: 159 AKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
K + D A LF EM + ++ +Y S+I L +G A L + M+ + P+
Sbjct: 869 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 928
Query: 215 AAFTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVD---LLSRSGQLKEAY 270
F+ ++ A G+LV+ K Y E +K S+ P+ Y+ +++ +L R G+ K+
Sbjct: 929 VTFSALIDAFVKKGKLVKAEKLYEEMIKR--SIDPNIFTYSSLINGFCMLDRLGEAKQML 986
Query: 271 ELLKSMPVESHASAWGALL-GACK 293
EL+ + + L+ G CK
Sbjct: 987 ELMIRKDCLPNVVTYNTLINGFCK 1010
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 159/370 (42%), Gaps = 69/370 (18%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
+ A RV +M + ++ ++NA++ G G + +A V +DM E+ DVVS++ +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 53 IDGYAKVGDIASA----RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+ G+ + D+ A R + +K K D +S LI G+ + EA +++ M + +
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
PDE+ +L++A G+L+ A Q H N
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKAL--------------QLH------------------N 544
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
++ E+ D+ +Y +I GL+ +A L K+ E +P + + ++ CS+
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 229 ---------------LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
++ E FE+M K + P Y M+ R+G +++AY L
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGK-NHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663
Query: 274 KSMPVES----HASAWGALLGACKFYGEV-ELGEIVAN--RLFEL-EPENSSPYVLLSSI 325
K M V+S H AL+ A G+V EL ++ + R EL E E + V ++
Sbjct: 664 KEM-VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHR 722
Query: 326 YAAADQWLDV 335
D LDV
Sbjct: 723 EGNMDVVLDV 732
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 150/353 (42%), Gaps = 62/353 (17%)
Query: 17 SWNAMVGGLVKGGDLIN-ARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFDK 71
S+NA++ ++ I+ A VF +M E +V ++ ++I G+ G+I A LFDK
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 72 APKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
+ + ++ LI GY + ++ K+ + M L ++P+
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN---------------- 274
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRANKLFEEMPKR----DLFS 181
+++ + +N C G M + + EM +R D +
Sbjct: 275 ----------------------LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT-VILTACSHGRLVEEGKHYFETM 240
Y ++I+G G QA+ + +ML GL P +T +I + C G + + + M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM-NRAMEFLDQM 371
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA---WGALLGACKFYGE 297
+ + + P+ Y +VD S+ G + EAY +L+ M + + + AL+ G+
Sbjct: 372 RVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 298 VELGEIVANRLFE--LEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGLR 348
+E V + E L P+ S +LS + D + VK +M E+G++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD-EALRVKREMVEKGIK 482
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 31/339 (9%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASARALF 69
NL ++N ++ GL++ L +A ++F +M V ++ V ID Y K GD SA F
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 70 DKAPKR---------DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMS 120
+K + +A L+S+ A+ G EA +IF G++ + + PD +M
Sbjct: 457 EKMKTKGIAPNIVACNASLYSL-----AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 121 ACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP----K 176
S+VG +D A + + ++ + VV +LI+ K +D A K+F M K
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCE-PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 177 RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKH 235
+ +Y +++ GL +G ++A+ LF M+ +G P+ F + C + + K
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 236 YFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA---YELLKSMPVESHASAWGALLGAC 292
F+ M VP Y ++ L ++GQ+KEA + +K + + L G
Sbjct: 631 LFKMM--DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVV 688
Query: 293 KFYGEVELGEIVANRLFEL--EPENSSPYVLLSSIYAAA 329
K + +I+ N L+ +P N L+ SI A A
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEA 727
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 19/245 (7%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDD-MPERD----VVSFTVMIDGYAKVGDIASAR 66
E N + N ++ GLVK G++ +A ++ D M +RD ++ +IDG +K G + A+
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 67 ALF----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
LF D + + ++++LI+G+ + G + A +F+ M V+PD L+
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNA--KCGNMDRANKLFEEMPKR--- 177
VG +D L +S ++ VV + +N K ++ A LF EM
Sbjct: 972 CMVGRVDEGLHYFKELKESGLN---PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 178 --DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
DL++Y S+I L I G E+A ++N++ GL P+ F ++ S E
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 236 YFETM 240
++TM
Sbjct: 1089 VYQTM 1093
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 23/304 (7%)
Query: 15 LTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALFD 70
L ++N ++GGL++ + A+ VF + DV ++ ++D Y K G I L+
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 71 KAPKRD----AFLWSVLISGYAQNGLPNEALKIFQG-MELMNVKPDEYIMVSLMSACSQV 125
+ + +++ISG + G ++AL ++ M + P L+ S+
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 126 GNLDLAKWVDCYLSQSSIDIG---QTHVVAALIDMNAKCGNMDRANKLFEEMPKR----D 178
G L AK L + +D G + LI+ K G D A LF+ M K D
Sbjct: 905 GRLYEAKQ----LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
L +Y ++ L + G ++ + F ++ GL PD + +I+ +EE F
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEA---YELLKSMPVESHASAWGALLGACKFY 295
MK+ + P Y ++ L +G ++EA Y ++ +E + + AL+
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 296 GEVE 299
G+ E
Sbjct: 1081 GKPE 1084
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 26/296 (8%)
Query: 1 DNAKRVFVQM------PERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFT 50
D AK VF +M P+R ++ ++ DL + ++ + +M + DVV+FT
Sbjct: 310 DCAKEVFEKMKTGRHKPDR--VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 51 VMIDGYAKVGDIASA----RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELM 106
+++D K G+ A + D+ + ++ LI G + ++AL++F ME +
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV--AALIDMNAKCGNM 164
VKP Y + + + G D ++ + + I V A+L + AK G
Sbjct: 428 GVKPTAYTYIVFIDYYGKSG--DSVSALETFEKMKTKGIAPNIVACNASLYSL-AKAGRD 484
Query: 165 DRANKLFEEMPK----RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI 220
A ++F + D +Y M++ S G ++A+ L ++M+ G PD +
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 221 LTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ V+E F MK + + P+ Y ++ L ++G+++EA EL + M
Sbjct: 545 INTLYKADRVDEAWKMFMRMK-EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 113/281 (40%), Gaps = 14/281 (4%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALF 69
N S+N ++ L+K A +V+ M + +++ ++ G K DI S L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 70 DKAP----KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ K + + +++ I + G NEA +I + M+ PD L+ A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFS 181
LD AK V + + + L+D + ++D + + EM K D+ +
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYI-TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ ++ L G +A + M ++G++P+ + ++ +++ F M+
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
S + P+ Y +D +SG A E + M + A
Sbjct: 426 S-LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 19/256 (7%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
+A +VF +M ER N+ ++N ++GGL + L A KV D M +++++ +I
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 54 DGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
DG+ VG + A +L R +++L+SG+ + G + A K+ + ME +K
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSID-IGQTHVVAALIDMNAKCGNMDRAN 168
P + L+ ++ N++ K + LS + + H + LI G M+ A+
Sbjct: 406 PSKVTYTILIDTFARSDNME--KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 169 KLFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+LF+ M +++ Y +MI G G + +A+ L +M + L P+ A++ ++
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 225 SHGRLVEEGKHYFETM 240
R +E + E M
Sbjct: 524 CKERKSKEAERLVEKM 539
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 16/276 (5%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
NL ++N ++ L K G +A +VFD+M ER ++V++ +I G + + A +
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 70 DKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
D+ + ++ LI G+ G +AL + + ++ + P L+S +
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFS 181
G+ A + + + I + LID A+ NM++A +L M + D+ +
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKV-TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF-TVILTACSHGRLVEEGKHYFETM 240
Y +I G I G +A LF M+ + P+ + T+IL C G K + M
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK-LLKEM 504
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ K + P+ Y M+++L + + KEA L++ M
Sbjct: 505 EEK-ELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 126/275 (45%), Gaps = 20/275 (7%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMPE----RDVVSFTVMIDGYAKVGDIASARALFDKA 72
S+ ++ G + G++ + + ++ E +VV +T +IDG K G+I A+ LF +
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 73 PK----RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
K + ++VLI+G +NG+ + ++++ M+ V P+ Y +M+ + G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM--DRANKLFEEMPKR----DLFSY 182
A V + + + ++V + C M + ANK+ ++M +L +Y
Sbjct: 285 KDAFQVFDEMRERGVS---CNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMK 241
++I G G +A+ L + + GL P + ++++ C G K E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-- 399
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ + PS Y ++D +RS +++A +L SM
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 108/240 (45%), Gaps = 16/240 (6%)
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
L+ V+I+ Y Q+ N ++ F M P L++ VG+ +W +
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFV--VGSSSFNQWWSFFN 153
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK----RDLFSYCSMIQGLSIHGY 194
S + + LI + G ++++ L E+ + ++ Y ++I G G
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYA 254
E+A LF +M GL+ + +TV++ + ++G +E M+ + P+ Y
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED-GVFPNLYTYN 272
Query: 255 CMVDLLSRSGQLKEAYELLKSMP---VESHASAWGALLGA-CKFYGEVELGEIVANRLFE 310
C+++ L + G+ K+A+++ M V + + L+G C+ E++L E AN++ +
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR---EMKLNE--ANKVVD 327
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 148/331 (44%), Gaps = 26/331 (7%)
Query: 1 DNAKRVFVQMPER---NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
D A +VF +M + NL+++N ++ L + G L A ++ D M + +V + +M+
Sbjct: 360 DEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 54 DGYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
D K + A A+F+ K D + LI G + G ++A K+++ M + +
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 110 PDEYIMVSLMSACSQVGNLDLAK--WVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
+ + SL+ G + + D S D+ ++ +D K G ++
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL---QLLNTYMDCMFKAGEPEKG 536
Query: 168 NKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+FEE+ R D SY +I GL G+A + LF M +G + D A+ +++
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 224 -CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL---KSMPVE 279
C G+ V + E MK+K P+ Y ++D L++ +L EAY L KS +E
Sbjct: 597 FCKCGK-VNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 280 SHASAWGALLGACKFYGEVELGEIVANRLFE 310
+ + +L+ G ++ ++ L +
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 121/255 (47%), Gaps = 19/255 (7%)
Query: 6 VFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYA 57
+F M E+ + ++N ++ G K G + A ++ ++M E VV++ +IDG A
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 58 KVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY 113
K+ + A LF++A + + ++S LI G+ + G +EA I + + + P+ Y
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 114 IMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFE 172
SL+ A + ++ A + C+ S + V LI+ K ++A ++
Sbjct: 694 TWNSLLDALVKAEEINEA--LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 173 EMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
EM K+ + SY +MI GL+ G +A LF++ G +PD+A + ++ S+G
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Query: 229 LVEEGKHYFETMKSK 243
+ FE + +
Sbjct: 812 RAMDAFSLFEETRRR 826
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 46/242 (19%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALK 98
E V FT +I G+AK G + SA +L D+ D L++V I + + G + A K
Sbjct: 200 EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWK 259
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
F +E +KPDE S+ I +
Sbjct: 260 FFHEIEANGLKPDEVTYTSM------------------------------------IGVL 283
Query: 159 AKCGNMDRANKLFEEMPKRD----LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
K +D A ++FE + K ++Y +MI G G ++A L + +G IP
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 215 AAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLK 274
A+ ILT V+E FE MK P+ Y ++D+L R+G+L A+EL
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 275 SM 276
SM
Sbjct: 402 SM 403
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 50/307 (16%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMPERDVV----SFTVMIDGYAKVGDIASARALFDKA 72
++ +M+G L K L A ++F+ + + V ++ MI GY G A +L ++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 73 PKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
+ + ++ +++ + G +EALK+F+ M+ + P+ L+ + G L
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKL 393
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCS 184
D A + + ++ + V ++D K +D A +FEEM + D ++CS
Sbjct: 394 DTAFELRDSMQKAGL-FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT-VILTACSHGRL-------------- 229
+I GL G + A ++ KML+ ++ +T +I +HGR
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 230 --------------------VEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
E+G+ FE +K++ VP Y+ ++ L ++G E
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANET 571
Query: 270 YELLKSM 276
YEL SM
Sbjct: 572 YELFYSM 578
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 22/294 (7%)
Query: 1 DNAKRVFVQMPERNLTS----WNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D+A +V+ +M + + + + +++ G + K++ DM + D+
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+D K G+ RA+F++ R DA +S+LI G + G NE ++F M+
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDR 166
D ++ + G ++ A + L + + VV ++ID AK +D
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQL---LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 167 ANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
A LFEE + ++ Y S+I G G ++A + +++ +GL P+ + +L
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
A + E F++MK + P+ Y +++ L + + +A+ + M
Sbjct: 701 ALVKAEEINEALVCFQSMK-ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 23/253 (9%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASA-- 65
E + ++ +++ GL K L A +F++ E +VV ++ +IDG+ KVG I A
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 66 --RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
L K + + W+ L+ + NEAL FQ M+ + P++ L++
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 124 QVGNLDLAKWVDCYLSQSSID---IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR--- 177
+V + A + + + I T +++ L AK GN+ A LF+
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL----AKAGNIAEAGALFDRFKANGGV 794
Query: 178 -DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEE---- 232
D Y +MI+GLS A A LF + GL N V+L +E+
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
Query: 233 GKHYFETMKSKYS 245
G ET K++++
Sbjct: 855 GAVLRETGKARHA 867
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 30/321 (9%)
Query: 1 DNAKRVFVQMP-ERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDG 55
+NA V +M ++ ++N ++ L G L A +V D M +RD V+++T++I+
Sbjct: 189 NNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 56 YAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPD 111
+ + A L D+ R D ++VL++G + G +EA+K M +P+
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 112 EYIM-VSLMSACSQVGNLDLAKWVDC-YLSQSSIDIGQTHVVAA---LIDMNAKCGNMDR 166
+ L S CS +W+D L + G + V LI+ + G + R
Sbjct: 309 VITHNIILRSMCST------GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 167 ANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
A + E+MP+ + SY ++ G ++A+ +M++ G PD + +LT
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 223 A-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PV 278
A C G+ VE+ + SK P Y ++D L+++G+ +A +LL M +
Sbjct: 423 ALCKDGK-VEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 279 ESHASAWGALLGACKFYGEVE 299
+ + +L+G G+V+
Sbjct: 481 KPDTITYSSLVGGLSREGKVD 501
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 133/295 (45%), Gaps = 24/295 (8%)
Query: 1 DNAKRVFVQMP----ERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D A + MP + N+ + N ++ + G ++A K+ DM + VV+F ++
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
I+ + G + A + +K P+ ++ ++ L+ G+ + + A++ + M
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQ---SSIDIGQTHVVAALIDMNAKCGNMD 165
PD ++++A + G ++ A + LS S + I V+ L AK G
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL----AKAGKTG 466
Query: 166 RANKLFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
+A KL +EM +DL +Y S++ GLS G ++A+ F++ G+ P+ F I+
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
R + + M ++ P+ Y +++ L+ G KEA ELL +
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 127/294 (43%), Gaps = 52/294 (17%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
++ ++ G + G A K+ + + DV+++ VMI GY K G+I +A ++
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 70 DK-APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
D+ + D ++ ++ +G K+ Q ME+ L
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSG------KLKQAMEV----------------------L 227
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCS 184
D DCY + I LI+ + + A KL +EM R D+ +Y
Sbjct: 228 DRMLQRDCYPDVITYTI--------LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSK 243
++ G+ G ++A+ N M + G P+ +IL + CS GR ++ K + ++
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP---VESHASAWGALL-GACK 293
+S PS + +++ L R G L A ++L+ MP + ++ ++ LL G CK
Sbjct: 340 FS--PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 40/214 (18%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGYAKVGDIASARALF 69
++ ++N M+ L K G + +A ++ + + + ++++ +IDG AK G A L
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 70 D----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
D K K D +S L+ G ++ G +EA+K F E M ++P+ S+M +
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSM 185
D A ID + +N C K + SY +
Sbjct: 533 RQTDRA-----------IDF-------LVFMINRGC--------------KPNETSYTIL 560
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV 219
I+GL+ G A++A+ L N++ N+GL+ ++A V
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 128/291 (43%), Gaps = 24/291 (8%)
Query: 2 NAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMI 53
+A ++ +M +R T ++N +V G+ K G L A K +DMP + +V++ +++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 54 DGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
G A L ++ +++LI+ + GL A+ I + M +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 110 PDEYIMVSLMSACSQVGNLDLA-KWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDR 166
P+ L+ + +D A ++++ +S+ +V + A C G ++
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY----PDIVTYNTMLTALCKDGKVED 432
Query: 167 ANKLFEEMPKRD----LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
A ++ ++ + L +Y ++I GL+ G +A+ L ++M + L PD ++ ++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
S V+E +F + + + P+ + ++ L +S Q A + L
Sbjct: 493 GLSREGKVDEAIKFFHEFE-RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 137/277 (49%), Gaps = 18/277 (6%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGYAKVGDIASARALF 69
NLT++N ++ G K +L + KVF +M ++D V+S+ +I+G G I+ A ++
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354
Query: 70 DK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
DK + + ++ LI+G+ +N + EAL +F ++ P + L+ A ++
Sbjct: 355 DKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414
Query: 126 GNLDLAKWVDCYLSQSSI--DIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR---DLF 180
G +D + + + I D+G + + A + N GN++ A KLF+++ + DL
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN---GNIEAAKKLFDQLTSKGLPDLV 471
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFET 239
++ +++G G + +A L +M GL P + + +++ C G L + +
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL-KAATNMRTQ 530
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
M+ + + + Y ++ S+ G+L++A LL M
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 67/366 (18%)
Query: 6 VFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYA 57
V+ +M R N+ ++N ++ L K G + AR V +DM +VVS+ +IDGY
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 58 KV---GDIASARALFDKAPKRDA----FLWSVLISGY-AQNGLPNEALKIFQGMELMNVK 109
K+ G + A A+ + + D +++LI G+ + LP ++K+F+ M +VK
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG-SMKVFKEMLDQDVK 328
Query: 110 PDEYIMVSLMSACSQVGNLDLA-----KWVDCYLS-------------------QSSIDI 145
P+ SL++ G + A K V + + ++D+
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 146 -----GQ-----THVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSI 191
GQ T + LID K G +D L EEM + D+ +Y +I GL
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 192 HGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSP 250
+G E A LF+++ ++GL PD F +++ C G E + +K M P
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKG----ESRKAAMLLKEMSKMGLKP 503
Query: 251 EH--YACMVDLLSRSGQLKEAYELLKSMPVES----HASAWGALLGACKFYGEVELGEIV 304
H Y ++ + G LK A + M E + +++ LL G++E ++
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563
Query: 305 ANRLFE 310
N + E
Sbjct: 564 LNEMLE 569
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 5 RVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGY 56
+VF +M ++ N+ S+N+++ GL GG + A + D M + +++++ +I+G+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 57 AKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
K + A +F + A ++++LI Y + G ++ + + ME + PD
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 113 YIMVSLMSACSQVGNLDLAKWV-DCYLSQSSIDIGQTHVV------------AAL----- 154
L++ + GN++ AK + D S+ D+ H++ AA+
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Query: 155 -------------IDMNAKC--GNMDRANKLFEEMPKR-----DLFSYCSMIQGLSIHGY 194
I M C GN+ A + +M K ++ SY ++QG S G
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVI 220
E A L N+ML +GL+P+ + ++
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIV 582
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 16/276 (5%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMIDGYAKVGDIASARALF 69
NL + N ++ + L A M E +V+F +++G+ + + A +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 70 DK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSA-CSQ 124
D+ K + +++ +I G ++ + AL + ME + PD SL+S CS
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 125 VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLF 180
D + V C +++ I ALID K G + A + +EEM +R D+
Sbjct: 235 GRWSDATRMVSC-MTKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM 240
+Y +I GL ++ ++A +F M+++G PD +++++ + VE G F M
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
S+ +V + Y ++ R+G+L A E+ + M
Sbjct: 353 -SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 3 AKRVFVQMPERNL----TSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMID 54
A+ + +M R+L +++ ++ GL L A ++F M + DVV+++++I+
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 55 GYAKVGDIASARALF----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
GY K + LF + R+ +++LI GY + G N A +IF+ M V P
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRAN 168
+ L+ G ++ A + + ++ +D +V I + C G + A
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMD---ADIVTYNIIIRGMCKAGEVADAW 451
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNA 215
++ + + D+++Y +M+ GL G +A LF KM +G++P+
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 116/258 (44%), Gaps = 21/258 (8%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
+A R+ M +R ++ ++NA++ VK G + A + +++M R D+V+++++I
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 54 DGYAKVGDIASARALF----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
G + A +F K D +S+LI+GY ++ +K+F M V
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRA 167
+ L+ + G L++A+ + + + +++ + ++ C G +++A
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV---HPNIITYNVLLHGLCDNGKIEKA 415
Query: 168 NKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+ +M K D+ +Y +I+G+ G A ++ + +GL+PD +T ++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 224 CSHGRLVEEGKHYFETMK 241
L E F MK
Sbjct: 476 LYKKGLRREADALFRKMK 493
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 23/246 (9%)
Query: 3 AKRVFVQM------PERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMID-- 54
A R+F M ER+ S+ +M+ L G I A ++ + E+ VV+ T+M +
Sbjct: 391 AHRLFCDMWSFPVKGERD--SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV 448
Query: 55 --GYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
K+ I+ LF+K P D F +++LI+ + + G +EA+ IF+ +E +
Sbjct: 449 FSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDC 508
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
KPD SL++ + G++D A + + ++ + L++ K ++ A
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN-PDVVTYSTLMECFGKTERVEMAY 567
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVI--LT 222
LFEEM + ++ +Y ++ L +G +AV L++KM +GL PD+ +TV+ L
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQ 627
Query: 223 ACSHGR 228
+ SHG+
Sbjct: 628 SVSHGK 633
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 158/334 (47%), Gaps = 42/334 (12%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
++ ++N ++ L K A +VF+DM +R D ++T+MI ++G A LF
Sbjct: 237 DIFAYNMLLDALAKDE---KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 70 DKAPKRDAFL----WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEY---IMVSLMSAC 122
++ L ++ L+ A+ + ++A+++F M +P+EY ++++L+ A
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 123 SQVGNLD-LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM------P 175
Q+ LD + + Y++Q + + L+ +K G++ A++LF +M
Sbjct: 354 GQLVRLDGVVEISKRYMTQG--------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG 405
Query: 176 KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKH 235
+RD SY SM++ L G +A+ + +K+ +G++ D + + +A + +
Sbjct: 406 ERD--SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD 463
Query: 236 YFETMKSKYSMVPSPE--HYACMVDLLSRSGQLKEA---YELLKSMPVESHASAWGALLG 290
FE MK PSP+ Y ++ R G++ EA +E L+ + ++ +L+
Sbjct: 464 LFEKMKKD---GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
Query: 291 ACKFYGEVELGEIVANRLFELEPENSSPYVLLSS 324
G+V+ + R E++ + +P V+ S
Sbjct: 521 CLGKNGDVDEAHV---RFKEMQEKGLNPDVVTYS 551
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 127/294 (43%), Gaps = 25/294 (8%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVS--FTVMID 54
D A +VF +M E N +++ ++ LV G L+ V + + +R + ++ ++
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE-ISKRYMTQGIYSYLVR 380
Query: 55 GYAKVGDIASARALF------DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+K+G ++ A LF +RD+++ ++ G EA+++ + V
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS--MLESLCGAGKTIEAIEMLSKIHEKGV 438
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDR 166
D + ++ SA +G L + + D + LI + G +D
Sbjct: 439 VTDTMMYNTVFSA---LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 167 ANKLFEEMP----KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
A +FEE+ K D+ SY S+I L +G ++A F +M +GL PD ++ ++
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
VE FE M K P+ Y ++D L ++G+ EA +L M
Sbjct: 556 CFGKTERVEMAYSLFEEMLVK-GCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 17/263 (6%)
Query: 27 KGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASA---RALFDKAPKRDAFL 79
+ G+ I + + + M + DV+ T +I G+ + +I A + +K + D F
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 80 WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLS 139
++ LI+G+ + ++A ++ M + PD ++ + G LDLA V L+
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV---LN 217
Query: 140 QSSIDIGQTHVVAALIDMNAKC--GNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHG 193
Q D Q V+ I + A G +D A KL +EM R D+F+Y ++I+G+ G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 194 YAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHY 253
++A + + +G PD ++ ++L A + EEG+ M S+ P+ Y
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTY 336
Query: 254 ACMVDLLSRSGQLKEAYELLKSM 276
+ ++ L R G+++EA LLK M
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLM 359
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 135/307 (43%), Gaps = 50/307 (16%)
Query: 1 DNAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFD----DMPERDVVSFTVM 52
D+A RV +M ++ + ++N M+G L G L A KV + D + V+++T++
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
I+ G + A L D+ R D F ++ +I G + G+ + A ++ + +EL
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
+PD L+ A L+ KW + G+ +
Sbjct: 295 EPDVISYNILLRAL-----LNQGKWEE----------GEKLMT----------------- 322
Query: 169 KLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHG 227
K+F E ++ +Y +I L G E+A+ L M +GL PD ++ ++ A C G
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL---LKSMPVESHASA 284
RL + + ETM S +P +Y ++ L ++G+ +A E+ L + ++S+
Sbjct: 383 RL-DVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 285 WGALLGA 291
+ + A
Sbjct: 441 YNTMFSA 447
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 23/282 (8%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV----SFTVMIDGYAKVGDIASARALF 69
N+ +N ++GG K GD+ NA VF ++ + + +F MI+G+ K GD ++ L
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 70 DKAPKRDA-----FLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQ 124
+ +R FL +++ + Y ++G + + + + KPD L++ +
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKY-RHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 125 VGNLDLAKWVDCYLSQSSID--IGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----D 178
G ++A +L ++S I A LI K D A+KL +M +R D
Sbjct: 358 EGKKEVAVG---FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYF 237
+ +Y +I GL + G+ + AV + K+++ G+ PD A + ++++ C GR + K F
Sbjct: 415 IVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL-PAKLLF 473
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE 279
M + +++P YA ++D RSG EA ++ S+ VE
Sbjct: 474 SEMLDR-NILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVE 513
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 168/385 (43%), Gaps = 42/385 (10%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGG---DLINAR-KVFDDMPERDVVSFTVM 52
D A ++ +QM ER ++ ++ ++ GLV G D +N + K+ D D + ++
Sbjct: 397 DIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNML 456
Query: 53 IDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
+ G K G A+ LF + R DA++++ LI G+ ++G +EA K+F V
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
K D +++ + G LD A +++ + + + +ID K +M A
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL-VPDKFTYSTIIDGYVKQQDMATAI 575
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
K+F M K ++ +Y S+I G G + A F +M L+P+ +T ++ +
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Query: 225 S-HGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLL--------------SRSGQ---L 266
+ +E+ +Y+E M + VP+ + C++ S GQ
Sbjct: 636 AKESSTLEKAVYYWELMMTN-KCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLF 694
Query: 267 KEAYELLKSMPVESHASAWGALLGACKFYGEVELGEIVANRL----FELEPENSSPYVLL 322
E + +KS HA+A+ + L +G V+ + +++ F +P + + +
Sbjct: 695 SEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHG 754
Query: 323 SSIYAAADQWLDVSHVKNKMKERGL 347
+ + QW ++ + E+GL
Sbjct: 755 FCVVGNSKQWRNMDFC--NLGEKGL 777
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 21/272 (7%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASAR--- 66
N S+ ++ K + A K+ M ER D+V++ ++I G G + A
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438
Query: 67 -ALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
L D+ DA ++++L+SG + G A +F M N+ PD Y+ +L+ +
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA----NKLFEEMPKRDLFS 181
G+ D A+ V + + + H A+I + G +D A N++ EE D F+
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVH-HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHG--RLVEEGKHYFE 238
Y ++I G A+ +F M P+ +T ++ C G ++ EE F+
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET---FK 614
Query: 239 TMKSKYSMVPSPEHYACMVDLLSR-SGQLKEA 269
M+ + +VP+ Y ++ L++ S L++A
Sbjct: 615 EMQLR-DLVPNVVTYTTLIRSLAKESSTLEKA 645
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 18/296 (6%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
++ + N+++ LVK L +ARKV+D+M +R D S +++ G G + R L
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 70 D----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ K + ++ +I GY + G A +F+ ++L P ++++ +
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKE 288
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCG-NMDRANKL---FEEMPKRDLFS 181
G+ + + + + + + + +ID + G +D A + K D+ +
Sbjct: 289 GDFVASDRLLSEVKERGLRV-SVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
Y +I L G E AVG ++ +GLIP+N ++ ++ A + + M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYEL---LKSMPVESHASAWGALL-GACK 293
+ P Y ++ L SG + +A + L V A+ + L+ G CK
Sbjct: 408 ER-GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 134/281 (47%), Gaps = 43/281 (15%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV----SFTVMI 53
+A R+ M +R N+ + A++ VK G+L+ AR ++ +M R VV ++ +I
Sbjct: 766 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 825
Query: 54 DGYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G+ G + A+ +FD K D ++ LI+G+ ++ + +K+F M +
Sbjct: 826 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 885
Query: 110 PDEYIMVSLMSACSQVGNLDLA-----KWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNM 164
D + +L+ Q G L++A + VDC +S DI ++ L+D G +
Sbjct: 886 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP---DIVTYNI---LLDCLCNNGKI 939
Query: 165 DRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF-TV 219
++A + E++ K D+ +Y +IQGL ++A LF + +G+ PD A+ T+
Sbjct: 940 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 999
Query: 220 ILTACSHG----------RLVEEG-----KHYFETMKSKYS 245
I C G R+ E+G + Y ET++ Y+
Sbjct: 1000 ISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYT 1040
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 22/298 (7%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
N+ +N ++ GL K DL NA +VF M ++ D V++ +I G + G A L
Sbjct: 712 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 771
Query: 70 DKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
KR + ++ LI + + G EA +++ M +V P+ + SL++
Sbjct: 772 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 831
Query: 126 GNLDLAKWV-DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLF 180
G L AK++ D +S+ T+ LI K ++ KLF EM + D F
Sbjct: 832 GCLGDAKYMFDLMVSKGCFPDVVTY--NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 889
Query: 181 SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFET 239
+Y ++I G G A +FN+M++ G+ PD + ++L C++G+ +E+ E
Sbjct: 890 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK-IEKALVMVED 948
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMP---VESHASAWGALL-GACK 293
++ K M Y ++ L R+ +LKEA+ L +S+ V+ A A+ ++ G C+
Sbjct: 949 LQ-KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1005
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 26/247 (10%)
Query: 46 VVSFTVMIDGYAKVGDIASARALFDKAPKRDAF-------LWSVLISGYAQNGLPNEALK 98
+V+ +++G+ + A +L D D F +++ +I+G +N N AL+
Sbjct: 678 IVTLGSLLNGFCQGNRFQEAVSLVDSM---DGFGFVPNVVIYNTVINGLCKNRDLNNALE 734
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCY-----LSQSSIDIGQTHVVAA 153
+F ME ++ D +L+S S G +W D + + ID A
Sbjct: 735 VFYCMEKKGIRADAVTYNTLISGLSNSG-----RWTDAARLLRDMVKRKID-PNVIFFTA 788
Query: 154 LIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEG 209
LID K GN+ A L++EM +R ++F+Y S+I G IHG A +F+ M+++G
Sbjct: 789 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 848
Query: 210 LIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA 269
PD + ++T + VE+G F M + +V Y ++ ++G+L A
Sbjct: 849 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVA 907
Query: 270 YELLKSM 276
++ M
Sbjct: 908 QKVFNRM 914
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 2 NAKRVFVQMPERNL----TSWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMI 53
+A R+ M +R++ ++ A++ VK G+L A++++ +M + V V++ +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 54 DGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G G + A+ FD + F ++ LISG+ + + +E +K+FQ M
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRA 167
D + +L+ QVG L +A + C++ + ++ I ++ C G ++ A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV---TPDIITHCILLHGLCVNGEIESA 405
Query: 168 NKLFEEMPKRD----LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTV-ILT 222
F++M + + + +Y MI GL E+A LF ++ EG+ PD +T+ IL
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 223 ACSHG----------RLVEEG 233
C +G R+ EEG
Sbjct: 466 LCKNGPRREADELIRRMKEEG 486
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 26/302 (8%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARA 67
E N+ +N ++ GL K G+L A ++ ++M ++ DVV++ ++ G G + A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 68 LFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACS 123
+ KR D ++ LI + + G +EA ++++ M +V P+ S+++
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 124 QVGNL-DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMP----KRD 178
G L D K D S+ T+ LI K +D KLF+ M D
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTY--NTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYF 237
+F+Y ++I G G A+ +F M++ + PD ++L C +G +E F
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE-IESALVKF 409
Query: 238 ETMK--SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES---HASAWGA-LLGA 291
+ M+ KY + + Y M+ L ++ ++++A+EL +PVE A + +LG
Sbjct: 410 DDMRESEKYIGIVA---YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 292 CK 293
CK
Sbjct: 467 CK 468
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 9/206 (4%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALK 98
E +V+F ++ G+ V I A +L K + +++ LI G +NG N AL+
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
+ ME + D +L++ G A + + + SI+ ALID+
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN-PDVVTFTALIDVF 256
Query: 159 AKCGNMDRANKLFEEMPKRDL----FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
K GN+D A +L++EM + + +Y S+I GL +HG A F+ M ++G P+
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 215 AAFTVILTACSHGRLVEEGKHYFETM 240
+ +++ R+V+EG F+ M
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRM 342
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 16/274 (5%)
Query: 16 TSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGYAKVGDIASARALFD- 70
++ ++ L K G+ A +F M ER+ VV ++++ID K G A +LF+
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 71 ---KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
K K D +S LI G +G ++ K+ + M N+ PD +L+ + G
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYC 183
L AK + + I T +LID K + AN++F+ M + D+ +Y
Sbjct: 331 LLEAKELYNEMITRGI-APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 184 SMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF-TVILTACSHGRLVEEGKHYFETMKS 242
+I + + LF ++ ++GLIP+ + T++L C G+L K F+ M S
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL-NAAKELFQEMVS 448
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ + PS Y ++D L +G+L +A E+ + M
Sbjct: 449 R-GVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 3 AKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMID 54
AK ++ +M R + ++N+++ G K L A ++FD M E D+V+++++I+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 55 GYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
Y K + LF + + + ++ L+ G+ Q+G N A ++FQ M V P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKL 170
L+ G L+ A + + +S + +G + +I +D A L
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG-IGIYNIIIHGMCNASKVDDAWSL 512
Query: 171 FEEMP----KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSH 226
F + K D+ +Y MI GL G +A LF KM +G PD+ + +++ A
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Query: 227 GRLVEEGKHYFETMK 241
G + E MK
Sbjct: 573 GSGLISSVELIEEMK 587
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
E D ++F+ +++G+ G ++ A AL D+ + D S LI+G G +EAL
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV-VAALIDM 157
+ M +PDE +++ + GN LA +D + +I + V + +ID
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA--LDLFRKMEERNIKASVVQYSIVIDS 254
Query: 158 NAKCGNMDRANKLFEEMP----KRDLFSYCSMIQGLSIHGYAE----------------- 196
K G+ D A LF EM K D+ +Y S+I GL G +
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 197 ------------------QAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
+A L+N+M+ G+ PD + ++ + E F+
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
M SK P Y+ +++ ++ ++ + L + +
Sbjct: 375 LMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 144/327 (44%), Gaps = 35/327 (10%)
Query: 2 NAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMI 53
+A R+ M ER N+ ++N+++ K G LI A K+FD+M +R ++V++ +I
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 54 DGYAKVGDIASARALFDKAPKRDAF----LWSVLISGYAQNGLPNEALKIFQGMELMNVK 109
+G+ + A+ +F +D ++ LI+G+ + + +++F+ M +
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 110 PDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDRA 167
+ +L+ Q + D A+ V Q D +++ L+D K G +++A
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMV---FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 168 NKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA 223
+FE + K D+++Y M +G+ G E LF + +G+ PD A+ +++
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 224 CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
L EE F MK + P Y ++ R G + EL+K M
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEMR------ 582
Query: 284 AWGALLGACKFYGEVELGEIVANRLFE 310
+C+F G+ +V + L +
Sbjct: 583 -------SCRFAGDASTYGLVTDMLHD 602
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 144/317 (45%), Gaps = 23/317 (7%)
Query: 3 AKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAK 58
+R+ V+ + +L ++ A++ GL K G+ A + + M E DVV ++ +ID K
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 59 VGDIASARALF----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI 114
+ A LF +K + D F +S LIS G ++A ++ M + P+
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 115 MVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRANKLFE 172
SL+ A ++ G L A+ + + Q SID ++V +N C +D A ++F
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSID---PNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 173 EMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
M + D+ +Y ++I G + LF M GL+ + +T ++
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEA---YELLKSMPVESHASAW 285
+ + F+ M S + P+ Y ++D L ++G+L++A +E L+ +E +
Sbjct: 430 DCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 286 GALL-GACKFYGEVELG 301
+ G CK G+VE G
Sbjct: 489 NIMSEGMCK-AGKVEDG 504
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 120/272 (44%), Gaps = 43/272 (15%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
NL ++N M+ L + L A + M + +V+ +++G+ I+ A AL
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 70 DK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
D+ + D ++ L+ G Q+ +EA+ + + M + +PD ++++ +
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFSYCSM 185
G DLA ++ NK+ + + D+ Y ++
Sbjct: 219 GEPDLA--------------------------------LNLLNKMEKGKIEADVVIYSTV 246
Query: 186 IQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMKSKY 244
I L + + + A+ LF +M N+G+ PD ++ +++ C++GR + + + ++ K
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+ P+ + ++D ++ G+L EA +L M
Sbjct: 307 N--PNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 147/349 (42%), Gaps = 59/349 (16%)
Query: 1 DNAKRVFVQM----PERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D+ KR F M + ++N M+ + K GD+ AR +F++M R D V++ M
Sbjct: 112 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 171
Query: 53 IDGYAKVG-------------------DIASARAL------FDKAP-------------- 73
IDG+ KVG D+ + AL F K P
Sbjct: 172 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 231
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
K + +S L+ + + G+ +A+K + M + + P+EY SL+ A ++GNL A
Sbjct: 232 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 291
Query: 134 VDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGL 189
+ + Q ++ ALID M A +LF +M +L SY ++I G
Sbjct: 292 LGNEMLQVGVEWNVV-TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 350
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAF-TVILTACSHGRLVEEGKHYFETMKSKYSMVP 248
++A+ L N++ G+ PD + T I CS + +E K MK + +
Sbjct: 351 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK-IEAAKVVMNEMK-ECGIKA 408
Query: 249 SPEHYACMVDLLSRSGQLKEAYELL---KSMPVESHASAWGALL-GACK 293
+ Y ++D +SG E LL K + +E + L+ G CK
Sbjct: 409 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 457
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 152/346 (43%), Gaps = 22/346 (6%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDM----PERDVVSFTVMIDGYAKVGDIASARALFDKA 72
S N ++ K G + ++ F DM V ++ +MID K GD+ +AR LF++
Sbjct: 97 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 156
Query: 73 PKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
R D ++ +I G+ + G ++ + F+ M+ M +PD +L++ + G L
Sbjct: 157 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 216
Query: 129 DLAKWVDCYLSQSSIDIGQTHV-VAALIDMNAKCGNMDRANKLFEEMPKRDL----FSYC 183
+ ++ Y + V + L+D K G M +A K + +M + L ++Y
Sbjct: 217 PIG--LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 274
Query: 184 SMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSK 243
S+I G A L N+ML G+ + +T ++ ++E + F M +
Sbjct: 275 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 334
Query: 244 YSMVPSPEHYACMVDLLSRSGQLKEAYEL---LKSMPVESHASAWGALL-GACKFYGEVE 299
++P+ Y ++ ++ + A EL LK ++ +G + G C ++E
Sbjct: 335 -GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE-KIE 392
Query: 300 LGEIVANRLFELEPE-NSSPYVLLSSIYAAADQWLDVSHVKNKMKE 344
++V N + E + NS Y L Y + + H+ ++MKE
Sbjct: 393 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 438
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 48/275 (17%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
NL S+NA++ G VK ++ A ++ +++ R D++ + I G + I +A+ +
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 398
Query: 70 DKAP----KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
++ K ++ +++ L+ Y ++G P E L + M+ ++++ V++++ C +
Sbjct: 399 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE------VTVVTFCVLI 452
Query: 126 GNLD----LAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLFS 181
L ++K VD Y ++ S D G + NA
Sbjct: 453 DGLCKNKLVSKAVD-YFNRISNDFG--------LQANAAI-------------------- 483
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
+ +MI GL E A LF +M+ +GL+PD A+T ++ V E + M
Sbjct: 484 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM- 542
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
++ M Y +V LS QL++A L+ M
Sbjct: 543 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 15/278 (5%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPER-----DVVSFTVMIDGYAKVGDIASA- 65
E N +N ++ GL K G A+++ ++ + S+ +IDG+ KVGD SA
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 66 ---RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
R + + + ++ LI+G+ ++ + AL++ M+ M +K D +L+
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 123 SQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----D 178
+ ++ A + L + + + V +LI G MD A L+++M D
Sbjct: 671 CKKNDMKTAYTLFSELPELGL-MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCD 729
Query: 179 LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFE 238
LF+Y +MI GL G A L++++L+ G++PD V++ S + E
Sbjct: 730 LFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789
Query: 239 TMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
MK K + P+ Y+ ++ R G L EA+ L M
Sbjct: 790 EMKKK-DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 23/258 (8%)
Query: 1 DNAKRVFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERDVVSFTVMIDG----Y 56
D++KR ++ R ++N ++ ++ + A F M +R VV F ++
Sbjct: 158 DSSKRFGFELTPR---AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSL 214
Query: 57 AKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDE 112
+ I A+ +++K D +L+ + P EA+KIF+ + +PD
Sbjct: 215 VRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDG 274
Query: 113 YIM-VSLMSACSQ---VGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
+ +++ +AC V LDL + + L + T V+ A + K GNM+ A
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFV----KEGNMEEAV 330
Query: 169 KLFEEMP----KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
++ +EM + + S++ G +A+ LFN+M EGL PD F+V++
Sbjct: 331 RVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWF 390
Query: 225 SHGRLVEEGKHYFETMKS 242
+E+ ++ MKS
Sbjct: 391 CKNMEMEKAIEFYMRMKS 408
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/281 (18%), Positives = 130/281 (46%), Gaps = 19/281 (6%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALFDKA 72
++ +++ VK G++ A +V D+M V++ T +++GY K ++ A LF++
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 73 PKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
+ D ++SV++ + +N +A++ + M+ + + P ++ +++ C + +
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431
Query: 129 DLAKWV--DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSY 182
+ A + D + S I + + + K G +D A + M ++ ++ Y
Sbjct: 432 EAALEIFNDSFESW----IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFY 487
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKS 242
+M+ + A +F++ML +GL P+N +++++ + + M +
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547
Query: 243 KYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS 283
+ + Y +++ L + GQ +A E+L+++ E S
Sbjct: 548 S-NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
+ D ++T M+ + + L D+ + + ++ LI Y + NEA+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG-QTHVVAALIDM 157
+F M+ KPD +L+ ++ G LD+A +D Y + + T + +I+
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA--MDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 158 NAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYA---EQAVGLFNKMLNEGL 210
K G++ A+KLF EM + +L +Y M + +H A + A+ L+ M N G
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM---MDLHAKARNYQNALKLYRDMQNAGF 535
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
PD +++++ H +EE + F M+ K + +P Y +VDL ++G +++A+
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 271 ELLKSM 276
+ ++M
Sbjct: 595 QWYQAM 600
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 158/358 (44%), Gaps = 34/358 (9%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALFDK- 71
++ MVG L + K+ D+M + + V++ +I Y + + A +F++
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 72 ---APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
K D + LI +A+ G + A+ ++Q M+ + PD + +++ + G+L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAA---LIDMNAKCGNMDRANKLFEEMP----KRDLFS 181
A + C + +D G T + ++D++AK N A KL+ +M + D +
Sbjct: 486 PAAHKLFCEM----VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
Y +++ L GY E+A +F +M + IPD + +++ VE+ +++ M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALLGACK----- 293
+ P+ ++ R ++ EAYELL++M + + LL C
Sbjct: 602 HA-GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Query: 294 ----FYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
F G++ +F L+ + P ++ A+ +LD+ H +++ +RGL
Sbjct: 661 LDMGFCGQLMASTGHPAHMFLLKMPAAGPDG--ENVRNHANNFLDLMHSEDRESKRGL 716
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 18/246 (7%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
+ D ++T M+ + + L D+ + + ++ LI Y + NEA+
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIG-QTHVVAALIDM 157
+F M+ KPD +L+ ++ G LD+A +D Y + + T + +I+
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA--MDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 158 NAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYA---EQAVGLFNKMLNEGL 210
K G++ A+KLF EM + +L +Y M + +H A + A+ L+ M N G
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM---MDLHAKARNYQNALKLYRDMQNAGF 535
Query: 211 IPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAY 270
PD +++++ H +EE + F M+ K + +P Y +VDL ++G +++A+
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK-NWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 271 ELLKSM 276
+ ++M
Sbjct: 595 QWYQAM 600
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 158/358 (44%), Gaps = 34/358 (9%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALFDK- 71
++ MVG L + K+ D+M + + V++ +I Y + + A +F++
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 72 ---APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
K D + LI +A+ G + A+ ++Q M+ + PD + +++ + G+L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAA---LIDMNAKCGNMDRANKLFEEMP----KRDLFS 181
A + C + +D G T + ++D++AK N A KL+ +M + D +
Sbjct: 486 PAAHKLFCEM----VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMK 241
Y +++ L GY E+A +F +M + IPD + +++ VE+ +++ M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALLGACK----- 293
+ P+ ++ R ++ EAYELL++M + + LL C
Sbjct: 602 HA-GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Query: 294 ----FYGEVELGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
F G++ +F L+ + P ++ A+ +LD+ H +++ +RGL
Sbjct: 661 LDMGFCGQLMASTGHPAHMFLLKMPAAGPDG--ENVRNHANNFLDLMHSEDRESKRGL 716
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 132/298 (44%), Gaps = 53/298 (17%)
Query: 1 DNAKRVFVQMPERNLT----SWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D+ ++ M +R +T +++A++ VK G L A ++ +M +R D V++T +
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 53 IDGYAKVGDIASARALFD----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNV 108
IDG+ K + A + D K + +++LI+GY + L ++ L++F+ M L V
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 109 KPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRAN 168
D +L+ ++G L++AK
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAK------------------------------------ 442
Query: 169 KLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTAC 224
+LF+EM R D+ SY ++ GL +G E+A+ +F K+ + D + +I+
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 225 SHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
+ V++ F ++ K + P + Y M+ L + G L EA L + M + H+
Sbjct: 503 CNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 127/276 (46%), Gaps = 16/276 (5%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
N ++ ++ + K G A ++ M ER D V ++++IDG K G + +A LF
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 70 D----KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ K K D +++ LI G+ G ++ K+ + M + PD +L+ +
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFS 181
G L A+ + + Q I T +LID K +D+AN + + M + ++ +
Sbjct: 331 GKLREAEELHKEMIQRGIS-PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAF-TVILTACSHGRLVEEGKHYFETM 240
+ +I G + + LF KM G++ D + T+I C G+L E K F+ M
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL-EVAKELFQEM 448
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
S+ + P Y ++D L +G+ ++A E+ + +
Sbjct: 449 VSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 12/243 (4%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
E D V+F+ +I+G G ++ A L D+ K + L++G NG ++A+
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMN 158
+ M +P+E ++ + G LA + + + I + + +ID
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY-SIIIDGL 257
Query: 159 AKCGNMDRANKLFEEMP----KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDN 214
K G++D A LF EM K D+ Y ++I+G G + L M+ + PD
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 215 AAFTVILTA-CSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL 273
AF+ ++ G+L E + + E ++ S P Y ++D + QL +A +L
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGIS--PDTVTYTSLIDGFCKENQLDKANHML 375
Query: 274 KSM 276
M
Sbjct: 376 DLM 378
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 29/297 (9%)
Query: 43 ERDVVSFTVMIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALK 98
E D+V+FT +I+G+ + A ++ ++ K D +++ +I +NG N AL
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 99 IFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTH--------V 150
+F ME ++PD + SL++ G +W D S+ G T
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSG-----RWRD----ADSLLRGMTKRKIKPDVIT 249
Query: 151 VAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQAVGLFNKML 206
ALID K G A +L+ EM + ++F+Y S+I G + G ++A +F M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 207 NEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQL 266
+G PD A+T ++ + V++ F M K + + Y ++ + G+
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKP 368
Query: 267 KEAYELLKSM---PVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSPYV 320
A E+ M V + + LL + G+V+ ++ + + E + +P +
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 115/242 (47%), Gaps = 14/242 (5%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARALF 69
N+ ++ +++ G G + AR++F M + DVV++T +I+G+ K + A +F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 70 DKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
+ ++ + ++ LI G+ Q G PN A ++F M V P+ L+
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKC--GNMDRANKLFEEMPKRDL---- 179
G + A + + + +D ++ + ++ C G +++A +FE+M KR++
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+Y +IQG+ G + AV LF + ++G+ P+ +T +++ L E F
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 240 MK 241
MK
Sbjct: 521 MK 522
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 153/328 (46%), Gaps = 25/328 (7%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDD------MPERDVVSFT 50
+ A+++F M + NL +++AM+ G K G++ A ++ + +P +VV F
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP--NVVVFG 308
Query: 51 VMIDGYAKVGDIASARALFDKAPK----RDAFLWSVLISGYAQNGLPNEALKIFQGMELM 106
++DG+ K ++ +AR+LF K + ++++ LI G+ ++G EA+ + ME +
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 107 NVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDR 166
N+ PD + L++ + A + + I + +LI K NM++
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI-FPSSATYNSLIHGYCKEYNMEQ 427
Query: 167 ANKLFEEMP----KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILT 222
A L EM + ++ ++ ++I G + A+GL+ +M +G++PD +T ++
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 223 ACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHA 282
A ++E + M + P+ +AC+VD + G+L A + +
Sbjct: 488 AHFKEANMKEALRLYSDMLEA-GIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN--NQQR 544
Query: 283 SAWGALLGACKFYGEVELGEIV-ANRLF 309
S W + C G + G I+ A+R F
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFF 572
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 3 AKRVFVQMPERNL----TSWNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMID 54
A R+F +M + ++N+++ G K ++ A + +M E ++++F+ +ID
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 55 GYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKP 110
GY V DI +A L+ + + D ++ LI + + EAL+++ M + P
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 111 DEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHV-VAALIDMNAKCGNMDRANK 169
+++ L+ + G L +A +D Y + HV LI+ + G + RA++
Sbjct: 513 NDHTFACLVDGFWKEGRLSVA--IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 170 LFEEMP----KRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPD 213
F +M D+ SY SM++G + L M+ G++P+
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 27 KGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALFDKAPKR----DAF 78
K G K+ D+M + +V +T+ I + + A +F+ K + +
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 79 LWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYL 138
+S +I GY + G +A +++ + + + P+ + +L+ + L A+ + ++
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 139 SQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGY 194
+ +D +V LI + K GNM A L EM D+F+Y +I GL I
Sbjct: 331 VKFGVD-PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 195 AEQAVGLFNKMLNEGLIPDNAAFTVIL 221
+A LF KM NE + P +A + ++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLI 416
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 14/260 (5%)
Query: 45 DVVSFTVMIDGYAKVGDIASARALFDKAP----KRDAFLWSVLISGYAQNGLPNEALKIF 100
DV + V+ K G + L D+ K + +++++ I ++ EA K+F
Sbjct: 198 DVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF 257
Query: 101 QGMELMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAK 160
+ M+ V P+ Y +++ + GN+ A + + + + + V L+D K
Sbjct: 258 ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL-LPNVVVFGTLVDGFCK 316
Query: 161 CGNMDRANKLFEEMPK----RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAA 216
+ A LF M K +L+ Y +I G G +AVGL ++M + L PD
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 217 FTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
+T+++ V E F+ MK++ + PS Y ++ + +++A +L M
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNE-RIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 277 P---VESHASAWGALL-GAC 292
VE + + L+ G C
Sbjct: 436 TASGVEPNIITFSTLIDGYC 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 53/283 (18%)
Query: 71 KAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDL 130
++PK ++S+LI + + GL EAL + + M+ PD +S+++ + D
Sbjct: 126 QSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFD- 181
Query: 131 AKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK-------------- 176
+ WVD L S + H+ L K G + KL +EM
Sbjct: 182 SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYI 241
Query: 177 ----RD---------------------LFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLI 211
RD L++Y +MI G G QA GL+ ++L L+
Sbjct: 242 LDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELL 301
Query: 212 PDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYE 271
P+ F ++ R + + F M K+ + P+ Y C++ +SG + EA
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHM-VKFGVDPNLYVYNCLIHGHCKSGNMLEAVG 360
Query: 272 LL---KSMPVESHASAWGALL-GACKFYGEVELGEIVANRLFE 310
LL +S+ + + L+ G C E ++ E ANRLF+
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCI---EDQVAE--ANRLFQ 398
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 21/317 (6%)
Query: 12 ERNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVMIDGYAKVGDIASARA 67
E + ++N + G G + A +V DM ++ DV+++T+++ G ++G+I
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 68 LFDKAPKRDAFL-----WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSAC 122
L R L SV++SG + G +EAL +F M+ + PD ++
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 123 SQVGNLDLAKWV-DCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEM----PKR 177
++G D+A W+ D + + +TH AL+ + G + A L + +
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTH--GALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 178 DLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYF 237
D+ Y +I G + G E+A+ LF ++ G+ P A F ++ + + E +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 238 ETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVE----SHASAWGALLGACK 293
+ +K Y + PS Y ++D + G K EL + M E ++ + G C+
Sbjct: 527 DVIK-LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 294 FYGEVELGEIVANRLFE 310
+ ++ R+FE
Sbjct: 586 GWKHENCNHVLRERIFE 602
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 168/400 (42%), Gaps = 66/400 (16%)
Query: 6 VFVQMPERNLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGYAKVGD 61
V+ ++ ++N +++ +V GL + L +A +D VVSF ++ GY K+G
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 62 IASARALFDKAPK----RDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYI--- 114
+ A++ F K + ++LI+G G EAL++ M V+PD
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 115 ---------MVS-----------------------LMSACSQVGNLDLAKWVDCYLSQSS 142
M+S L+ Q+GN+D+ + +
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 143 IDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGLSIHGYAEQA 198
++ + ++ K G +D A LF +M DL +Y +I GL G + A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 199 VGLFNKMLNEGLIPDNAAF-TVILTACSHGRLVEEGKHYFETMKSKYSMVPSPEH----- 252
+ L+++M ++ ++P++ ++L C G L+ E + + S++ S E
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL-EARSLLD------SLISSGETLDIVL 470
Query: 253 YACMVDLLSRSGQLKEAYELLK---SMPVESHASAWGALL-GACKFYGEVELGEIV-ANR 307
Y ++D ++SG ++EA EL K + + + +L+ G CK E +I+ +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 308 LFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMKERGL 347
L+ L P S Y L YA + ++ +MK G+
Sbjct: 531 LYGLAPSVVS-YTTLMDAYANCGNTKSIDELRREMKAEGI 569
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 18/277 (6%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERD----VVSFTVMIDGYAKVGDIASA---- 65
++ ++N+++ GL K G++ A +V D M RD V++ +I K + A
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 66 RALFDKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQV 125
R L K D ++ LI G A+++F+ M +PDE+ L+ +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 126 GNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCGNMDRANKLFEEMP----KRDL 179
G LD A + L Q + V+ LID K A ++F+EM R+
Sbjct: 449 GKLDEALNM---LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+Y ++I GL E A L ++M+ EG PD + +LT G +++ +
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSM 276
M S P Y ++ L ++G+++ A +LL+S+
Sbjct: 566 MTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 21/308 (6%)
Query: 14 NLTSWNAMVGGLVKGGDLINARKVFDDMPERDVV----SFTVMIDGYAKVGDIASARALF 69
+++++N ++ L + L A + +DMP +V +FT ++ GY + GD+ A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 70 DKAPKRDAFLWS-----VLISGYAQNGLPNEALKIFQGMELMN-VKPDEYIMVSLMSACS 123
++ + WS V++ G+ + G +AL Q M + PD+Y +L++
Sbjct: 248 EQMVEFGCS-WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 124 QVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRD----L 179
+ G++ A + + Q D + ++I K G + A ++ ++M RD
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYD-PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 180 FSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFET 239
+Y ++I L E+A L + ++G++PD F ++ R FE
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 240 MKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASA---WGALL-GACKFY 295
M+SK P Y ++D L G+L EA +LK M + A + + L+ G CK
Sbjct: 426 MRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 296 GEVELGEI 303
E EI
Sbjct: 485 KTREAEEI 492
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 133/296 (44%), Gaps = 23/296 (7%)
Query: 17 SWNAMVGGLVKGGDLINARKVFDDMPERDV----VSFTVMIDGYAKVGDIASARALFDKA 72
++ ++ G ++ GDL A ++ + M E VS V++ G+ K G + A +
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 73 PKRDAFL-----WSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGN 127
+D F ++ L++G + G A++I M PD Y S++S ++G
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG- 344
Query: 128 LDLAKWVDCYLSQSSIDIGQTHVV-AALIDMNAKCGNMDRANKLFEEMPKR----DLFSY 182
++ + V+ + D V LI K ++ A +L + + D+ ++
Sbjct: 345 -EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 183 CSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETMK 241
S+IQGL + A+ LF +M ++G PD + +++ + CS G+L +E + + M+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL-DEALNMLKQME 462
Query: 242 SKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVES---HASAWGALL-GACK 293
S Y ++D ++ + +EA E+ M V ++ + L+ G CK
Sbjct: 463 LS-GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 29/234 (12%)
Query: 74 KRDAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLAKW 133
K D ++VLI + A+ + + M + PDE ++M + G+LD A
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 134 VD-------CYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPKRDLF-----S 181
+ C S S+++ ++ K G ++ A +EM +D F +
Sbjct: 246 IREQMVEFGCSWSNVSVNV--------IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 182 YCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTA-CSHGRLVEEGKHYFETM 240
+ +++ GL G+ + A+ + + ML EG PD + +++ C G V+E + M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE-VKEAVEVLDQM 356
Query: 241 KSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESHASAWGALLGACKF 294
++ P+ Y ++ L + Q++EA EL + + ++ G L C F
Sbjct: 357 ITR-DCSPNTVTYNTLISTLCKENQVEEATELARVL------TSKGILPDVCTF 403
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 128/291 (43%), Gaps = 18/291 (6%)
Query: 18 WNAMVGGLVKGGDLINARKVFDDMP----ERDVVSFTVMIDGYAKVGDIASARALFDKAP 73
+ M+ L + G L +VFD+MP R V S+T +I+ Y + G ++ L D+
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 74 KR----DAFLWSVLISGYAQNGLPNEA-LKIFQGMELMNVKPDEYIMVSLMSACSQVGNL 128
++ +I+ A+ GL E L +F M ++PD +L+SAC+ G
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 129 DLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRANKLFEEMPK----RDLFSYCS 184
D A+ V ++ I + + L++ K +++ L EM D+ SY
Sbjct: 264 DEAEMVFRTMNDGGI-VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 185 MIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKY 244
+++ + G ++A+G+F++M G P+ ++V+L ++ + F MKS
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS- 381
Query: 245 SMVPSPEHYACMVDLLSRSGQLKEAYELLKSM---PVESHASAWGALLGAC 292
+ P Y ++++ G KE L M +E + ++ AC
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 124/283 (43%), Gaps = 19/283 (6%)
Query: 49 FTVMIDGYAKVGDIASARALFDKAPK----RDAFLWSVLISGYAQNGLPNEALKIFQGME 104
+T+MI + G + +FD+ P R F ++ LI+ Y +NG +L++ M+
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 105 LMNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVA--ALIDMNAKCG 162
+ P ++++AC++ G LD + + I Q +V L+ A G
Sbjct: 204 NEKISPSILTYNTVINACAR-GGLDWEGLLGLFAEMRHEGI-QPDIVTYNTLLSACAIRG 261
Query: 163 NMDRANKLFEEMPK----RDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFT 218
D A +F M DL +Y +++ E+ L +M + G +PD ++
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 219 VILTACSHGRLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYEL---LKS 275
V+L A + ++E F M++ P+ Y+ +++L +SG+ + +L +KS
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 276 MPVESHASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP 318
+ A+ + L+ + +GE + V ++ EN P
Sbjct: 381 SNTDPDAATYNILI---EVFGEGGYFKEVVTLFHDMVEENIEP 420
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 153/364 (42%), Gaps = 55/364 (15%)
Query: 1 DNAKRVFVQMPE----RNLTSWNAMVGGLVKGGDLINARKVFDDMPER----DVVSFTVM 52
D VF +MP R++ S+ A++ + G + ++ D M ++++ +
Sbjct: 158 DKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
Query: 53 IDGYAKVG-DIASARALF----DKAPKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
I+ A+ G D LF + + D ++ L+S A GL +EA +F+ M
Sbjct: 218 INACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG 277
Query: 108 VKPDEYIMVSLMSA----------CSQVGNL-------DLAKW---VDCYLSQSSID--I 145
+ PD L+ C +G + D+ + ++ Y SI +
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 146 GQTHVVAA------------LIDMNAKCGNMDRANKLFEEMPKR----DLFSYCSMIQGL 189
G H + A L+++ + G D +LF EM D +Y +I+
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETMKSKYSMVPS 249
GY ++ V LF+ M+ E + PD + I+ AC G L E+ + + M + +VPS
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPS 456
Query: 250 PEHYACMVDLLSRSGQLKEAYELLKSM-PVESHAS--AWGALLGACKFYGEVELGEIVAN 306
+ Y +++ ++ +EA +M V S+ S + +LL + G V+ E + +
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILS 516
Query: 307 RLFE 310
RL +
Sbjct: 517 RLVD 520
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 150/366 (40%), Gaps = 30/366 (8%)
Query: 1 DNAKRVFVQMPE----RNLTSWNAMVGGLVKGGDLINARKVFDDMPER-------DVVSF 49
D A+ VF M + +LT+++ +V G L KV D + E D+ S+
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETF---GKLRRLEKVCDLLGEMASGGSLPDITSY 320
Query: 50 TVMIDGYAKVGDIASARALFDKAPKR----DAFLWSVLISGYAQNGLPNEALKIFQGMEL 105
V+++ YAK G I A +F + +A +SVL++ + Q+G ++ ++F M+
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 106 MNVKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMD 165
N PD L+ + G + + + +I+ +I K G +
Sbjct: 381 SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE-PDMETYEGIIFACGKGGLHE 439
Query: 166 RANKLFEEMPKRDLF----SYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVIL 221
A K+ + M D+ +Y +I+ E+A+ FN M G P F +L
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 222 TACSHGRLVEEGKHYFETMKSKYSMVP-SPEHYACMVDLLSRSGQLKEAYELLKSMPVES 280
+ + G LV+E + + S +P + + + ++ + G+ +EA + M
Sbjct: 500 YSFARGGLVKESEAILSRLVD--SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 281 HASAWGALLGACKFYGEVELGEIVANRLFELEPENSSP----YVLLSSIYAAADQWLDVS 336
L Y L + + E++ + P Y ++ ++Y ++W DV+
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 337 HVKNKM 342
+ +M
Sbjct: 618 ELLEEM 623
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 103/240 (42%), Gaps = 47/240 (19%)
Query: 149 HVVAALIDMNAKCGNMDRANKLFEEMP----KRDLFSYCSMIQGLSIHGYAEQA------ 198
H+ +I + + G +D+ ++F+EMP R +FSY ++I +G E +
Sbjct: 142 HIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDR 201
Query: 199 ------------------------------VGLFNKMLNEGLIPDNAAFTVILTACSHGR 228
+GLF +M +EG+ PD + +L+AC+
Sbjct: 202 MKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 229 LVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELLKSMPVESH---ASAW 285
L +E + F TM +VP Y+ +V+ + +L++ +LL M +++
Sbjct: 262 LGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSY 320
Query: 286 GALLGACKFYGEVE--LGEIVANRLFELEPENSSPYVLLSSIYAAADQWLDVSHVKNKMK 343
LL A G ++ +G + P N++ Y +L +++ + ++ DV + +MK
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTP-NANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 139/307 (45%), Gaps = 55/307 (17%)
Query: 1 DNAKRVFVQMPER----NLTSWNAMVGGLVKGGDLINARKVFDDMPER-----DVVSFTV 51
D AK + ++ E+ + ++N ++ L K DL + D+M + D+VSFT+
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 52 MIDGYAKVGDIASARALFDK----APKRDAFLWSVLISGYAQNGLPNEALKIFQGMELMN 107
+ID ++ A L K K D FL++ ++ G+ +EA+ +++ M+
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 108 VKPDEYIMVSLMSACSQVGNLDLAKWVDCYLSQSSIDIGQTHVVAALIDMNAKCGNMDRA 167
V+PD+ +L+ S+ G ++ A+ YL ++ +D G
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARM---YL-KTMVDAGY-------------------- 331
Query: 168 NKLFEEMPKRDLFSYCSMIQGLSIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHG 227
+ D +Y S++ G+ G + A+ L +M G P++ + +L
Sbjct: 332 --------EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Query: 228 RLVEEGKHYFETMKSKYSMVPSPEHYACMVDLLSRSGQLKEAYELL------KSMPVESH 281
RL+++G +E MKS + S YA +V L +SG++ EAYE+ KS+ S
Sbjct: 384 RLMDKGMELYEMMKSSGVKLES-NGYATLVRSLVKSGKVAEAYEVFDYAVDSKSL---SD 439
Query: 282 ASAWGAL 288
ASA+ L
Sbjct: 440 ASAYSTL 446
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 15/229 (6%)
Query: 76 DAFLWSVLISGYAQNGLPNEALKIFQGMELMNVKPDEYIMVSLMSACSQVGNLDLA-KWV 134
D + + + G +EA + + + + PD Y L+ + +L + ++V
Sbjct: 158 DQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV 217
Query: 135 DCYLSQSSIDIGQTHV-VAALIDMNAKCGNMDRANKLFEEMP----KRDLFSYCSMIQGL 189
D + D+ V LID N+ A L ++ K D F Y ++++G
Sbjct: 218 DEM--RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 190 SIHGYAEQAVGLFNKMLNEGLIPDNAAFTVILTACSHGRLVEEGKHYFETM-KSKYSMVP 248
+AVG++ KM EG+ PD + ++ S VEE + Y +TM + Y P
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE--P 333
Query: 249 SPEHYACMVDLLSRSGQLKEAYELLKSMPVESHAS---AWGALL-GACK 293
Y +++ + R G+ A LL+ M A + LL G CK
Sbjct: 334 DTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382