Jatropha Genome Database

JcCB0120561.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0120561.20 + phase: 0 /partial
         (150 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34370.1 | Symbols: ATARI1, ARI1 | ARI1 (ARIADNE); protein bi...   166   4e-42
AT2G16090.1 | Symbols: ATARI12, ARI12 | zinc finger protein-rela...   143   4e-35
AT3G27710.1 | Symbols: ATARI13, ARI13 | zinc finger protein-rela...   119   1e-27
AT3G27720.1 | Symbols: ATARI14, ARI14 | zinc finger protein-rela...    58   3e-09
AT2G31770.1 | Symbols:  | zinc finger (C3HC4-type RING finger) f...    52   2e-07
AT2G31760.1 | Symbols:  | zinc finger protein-related | chr2:135...    50   4e-07
AT1G65430.1 | Symbols:  | zinc finger protein-related | chr1:243...    50   4e-07
AT2G31780.1 | Symbols: ATARI11, ARI11 | protein binding / zinc i...    50   6e-07
AT1G05890.1 | Symbols:  | zinc finger protein-related | chr1:177...    46   8e-06

>AT4G34370.1 | Symbols: ATARI1, ARI1 | ARI1 (ARIADNE); protein
           binding / zinc ion binding | chr4:16434547-16437037
           FORWARD
          Length = 597

 Score =  166 bits (421), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/124 (62%), Positives = 98/124 (79%)

Query: 24  ENEESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 83
           +NEES+ +    K  +T++IT+ SLLAAQREDL RVMELLS++EHHARTLLIHY+WDVE+
Sbjct: 25  DNEESELQPLSSKRSNTQVITQESLLAAQREDLLRVMELLSIKEHHARTLLIHYQWDVEK 84

Query: 84  LLAVFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCY 143
           L AVFVEKGK  LF+ AGVTV +    +S    SS ++CD+C+ED+ GD  TRMDCGHC+
Sbjct: 85  LFAVFVEKGKDSLFSGAGVTVFDYQYGNSSFPQSSQMSCDVCMEDLPGDHMTRMDCGHCF 144

Query: 144 CNDC 147
           CN+C
Sbjct: 145 CNNC 148


>AT2G16090.1 | Symbols: ATARI12, ARI12 | zinc finger protein-related
           | chr2:6987367-6989822 REVERSE
          Length = 593

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 96/125 (76%), Gaps = 1/125 (0%)

Query: 24  ENEESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVER 83
           +N+ES       +  + K+ITK SLLAAQREDLRRVMELLS++EHHARTLLIHYRWDVE+
Sbjct: 25  DNDESVSIPVSSRSNTVKVITKESLLAAQREDLRRVMELLSVKEHHARTLLIHYRWDVEK 84

Query: 84  LLAVFVEKGKSYLFTEAGVTVVE-QLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHC 142
           L AV VEKGK  LF+ AGVT++E Q    S   SSS ++CDIC+ED+ G + TRMDCGH 
Sbjct: 85  LFAVLVEKGKDSLFSGAGVTLLENQSCDSSVSGSSSMMSCDICVEDVPGYQLTRMDCGHS 144

Query: 143 YCNDC 147
           +CN+C
Sbjct: 145 FCNNC 149


>AT3G27710.1 | Symbols: ATARI13, ARI13 | zinc finger protein-related
           | chr3:10269304-10270917 FORWARD
          Length = 537

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 87/122 (71%), Gaps = 5/122 (4%)

Query: 27  ESDFRWAPPKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVERLLA 86
           E D +       ++++I K SL+AAQ+E L RVMELLS++E+ ARTLLI+Y+W+VE+L +
Sbjct: 30  EVDLQPVTSTKSTSQVIKKESLVAAQKEILVRVMELLSVKENQARTLLIYYQWNVEKLFS 89

Query: 87  VFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIE-DISGDKATRMDCGHCYCN 145
           VF ++GK  +F+ AG+TV     + S +TS  T+ CD+C+E D+  +  TRM+CGH +CN
Sbjct: 90  VFADQGKDRMFSCAGLTVF----VPSLVTSKKTMKCDVCMEDDLPSNVMTRMECGHRFCN 145

Query: 146 DC 147
           DC
Sbjct: 146 DC 147


>AT3G27720.1 | Symbols: ATARI14, ARI14 | zinc finger protein-related
           | chr3:10271876-10273621 FORWARD
          Length = 493

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 38/54 (70%)

Query: 47  SLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVERLLAVFVEKGKSYLFTEA 100
           S L   RE   +VME LS+ E+ ARTLLI Y+W+V++L +V+ ++GK  LF+ A
Sbjct: 33  SDLQHSREPTSQVMEFLSVTENQARTLLIQYQWNVDKLFSVYTDQGKDVLFSRA 86


>AT2G31770.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
           family protein | chr2:13511579-13513550 FORWARD
          Length = 543

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 35  PKGPSTKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVERLLAVFVEKGKS 94
           P   S  I+ +  +L  QR+D+ RV  +LSL +     LL+HY W V ++   +    + 
Sbjct: 38  PSEKSYVILKEEDILKLQRDDIERVSSILSLSQVEVIVLLLHYNWCVSKVEDEWF-TDEE 96

Query: 95  YLFTEAGVTVVEQLDIDSPLTSSS----TITCDICIEDISGDKATRMDCGHCYCNDC 147
            +    G+     +D +            I C IC E  + ++  R+ CGH YC  C
Sbjct: 97  RIRKAVGLLKEPVVDFNGGEKDKKCRKVNIQCGICFESYTREEIARVSCGHPYCKTC 153


>AT2G31760.1 | Symbols:  | zinc finger protein-related |
           chr2:13508493-13510390 FORWARD
          Length = 514

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 4/109 (3%)

Query: 39  STKIITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVERLLAVFVEKGKSYLFT 98
           S  II +  +L  QR+D+ RV  +L L +  A  LL+HY W V +L   +    +    T
Sbjct: 42  SYVIIKEEEILKLQRDDIERVSTILFLSQVEAIVLLLHYHWCVSKLEDEWFTDEERIRKT 101

Query: 99  EAGVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCYCNDC 147
             G+     +D++    +   I C IC E  +  +   + CGH YC  C
Sbjct: 102 -VGILKEPVVDVNG---TEVDIQCGICFESYTRKEIASVSCGHPYCKTC 146


>AT1G65430.1 | Symbols:  | zinc finger protein-related |
           chr1:24301165-24306159 REVERSE
          Length = 567

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 42  IITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVERLL-AVFVEKGKSYLFTEA 100
           ++++A +   Q +D+ R+  +LS+  + +  LL HY W V R+    F ++ K       
Sbjct: 53  VLSEADICKLQEDDISRISTVLSISRNSSAILLRHYNWCVSRVHDEWFADEEK----VRD 108

Query: 101 GVTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCYCNDC 147
            V ++E+  +D P  +   + C IC E    DK     CGH +C+ C
Sbjct: 109 AVGLLEKPVVDFP--TDGELDCGICFETFLSDKLHAAACGHPFCDSC 153


>AT2G31780.1 | Symbols: ATARI11, ARI11 | protein binding / zinc ion
           binding | chr2:13515199-13517142 FORWARD
          Length = 443

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)

Query: 42  IITKASLLAAQREDLRRVMELLSLREHHARTLLIHYRWDVERLLAVFVEKGKSYLFTEAG 101
           ++ +  +L  QR+D+ +V  +LS+ +  +  LL+HY W V +L   +    +    T  G
Sbjct: 63  VVKEEDILKLQRDDIEQVSTVLSVSQVESIVLLLHYHWCVSKLEDEWFTDEERIRKT-VG 121

Query: 102 VTVVEQLDIDSPLTSSSTITCDICIEDISGDKATRMDCGHCYCNDC 147
           +     +D++    +   I C IC E  +  +  R+ CGH YC  C
Sbjct: 122 ILKEPVVDVNG---TEVDIQCGICFESYTRKEIARVSCGHPYCKTC 164


>AT1G05890.1 | Symbols:  | zinc finger protein-related |
           chr1:1779631-1784166 FORWARD
          Length = 552

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 17/136 (12%)

Query: 24  ENEESDFRWAPPKGPSTKII----TKASLLAAQREDLRR--------VMELLSLREHHAR 71
           +++E+DF +         II    +K++ +  + ED+RR        V  +LS+ +  A 
Sbjct: 27  DSDETDFGFGEADTDDAAIIASYRSKSNYVVLKEEDIRRHQNDDVGRVSAVLSITDVEAS 86

Query: 72  TLLIHYRWDVERLLAVFVEKGKSYLFTEAGVTVVEQLDIDSPLTSSSTITCDICIEDISG 131
           TLL+HY W V ++   +    +    T   V ++E   + +P       TC IC +  + 
Sbjct: 87  TLLLHYHWSVSKVNDEWFADEERVRRT---VGILEGPVVTTP--DGREFTCGICFDSYTL 141

Query: 132 DKATRMDCGHCYCNDC 147
           ++   + CGH +C  C
Sbjct: 142 EEIVSVSCGHPFCATC 157