Jatropha Genome Database

JcCB0119431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0119431.10 - phase: 1 /TE
         (1413 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   381   e-105
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   204   2e-52
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...   121   3e-27
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    70   8e-12
AT5G48050.1 | Symbols:  | unknown protein | chr5:19472661-194737...    56   2e-07

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  381 bits (978), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/470 (41%), Positives = 285/470 (60%), Gaps = 5/470 (1%)

Query: 873  EPTRVTQALKLPKWRQAMNVEFDALITNGTWVLVPPAAGQNLVGCKWIFRVKRNPDGTVA 932
            EP+   +A +   W  AM+ E  A+ T  TW +      +  +GCKW++++K N DGT+ 
Sbjct: 85   EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 933  KYKARLVAKGYTQRPGIDFEDTFSPVLKPTTIRVILTMAVSKRWNVYQLDVNNAFLHGPL 992
            +YKARLVAKGYTQ+ GIDF +TFSPV K T++++IL ++    + ++QLD++NAFL+G L
Sbjct: 145  RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204

Query: 993  SENVYMQQPPGFI----DSEKPHYVCKLVKALYGLRQAPRAWYQALRNCAVQFGFVQSKS 1048
             E +YM+ PPG+     DS  P+ VC L K++YGL+QA R W+       + FGFVQS S
Sbjct: 205  DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264

Query: 1049 DHSLFILQRGAKTCFFLVYVDDLLLTGNCNELIHLFISALGSKFSLKDPQKLNFFLGIDI 1108
            DH+ F+          LVYVDD+++  N +  +    S L S F L+D   L +FLG++I
Sbjct: 265  DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324

Query: 1109 HTTASGMFMSQHHYIRKLLVAARMEGVKPVSTPFATTTTLLKNVTGKGVNATEYRKLVGA 1168
              +A+G+ + Q  Y   LL    + G KP S P   + T   +  G  V+A  YR+L+G 
Sbjct: 325  ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384

Query: 1169 LQYLTWTRPDICYAVNKLSQFMQSPSSAHWEALKRLLRYLKSTIDYGIKITPQSAFHFHA 1228
            L YL  TR DI +AVNKLSQF ++P  AH +A+ ++L Y+K T+  G+  + Q+      
Sbjct: 385  LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444

Query: 1229 FSDADWXGDPLDRSSTTGYILYLGNVPISWASRKQKSVARSSTEAEYRAVASTASEVMWV 1288
            FSDA +      R ST GY ++LG   ISW S+KQ+ V++SS EAEYRA++    E+MW+
Sbjct: 445  FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504

Query: 1289 SSLLTELGVLSSVQVPVIYCDNISTTYVCQNPVYHSRMKHIEIDIHFVRD 1338
            +    EL +  S +  +++CDN +  ++  N V+H R KHIE D H VR+
Sbjct: 505  AQFFRELQLPLS-KPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  204 bits (520), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 153/229 (66%), Gaps = 3/229 (1%)

Query: 1063 FFLVYVDDLLLTGNCNELIHLFISALGSKFSLKDPQKLNFFLGIDIHTTASGMFMSQHHY 1122
            + L+YVDD+LLTG+ N L+++ I  L S FS+KD   +++FLGI I T  SG+F+SQ  Y
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKY 61

Query: 1123 IRKLLVAARMEGVKPVSTPFATTTTLLKNV-TGKGVNATEYRKLVGALQYLTWTRPDICY 1181
              ++L  A M   KP+STP      L  +V T K  + +++R +VGALQYLT TRPDI Y
Sbjct: 62   AEQILNNAGMLDCKPMSTPLPLK--LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119

Query: 1182 AVNKLSQFMQSPSSAHWEALKRLLRYLKSTIDYGIKITPQSAFHFHAFSDADWXGDPLDR 1241
            AVN + Q M  P+ A ++ LKR+LRY+K TI +G+ I   S  +  AF D+DW G    R
Sbjct: 120  AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179

Query: 1242 SSTTGYILYLGNVPISWASRKQKSVARSSTEAEYRAVASTASEVMWVSS 1290
             STTG+  +LG   ISW++++Q +V+RSSTE EYRA+A TA+E+ W S+
Sbjct: 180  RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSSA 228


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score =  121 bits (304), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 82/128 (64%), Gaps = 5/128 (3%)

Query: 846 MVTRSQNNIYK--PKVLHTVTKHPLPATVEPTRVTQALKLPKWRQAMNVEFDALITNGTW 903
           M+TRS+  I K  PK   T+T        EP  V  ALK P W QAM  E DAL  N TW
Sbjct: 1   MLTRSKAGINKLNPKYSLTITT---TIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTW 57

Query: 904 VLVPPAAGQNLVGCKWIFRVKRNPDGTVAKYKARLVAKGYTQRPGIDFEDTFSPVLKPTT 963
           +LVPP   QN++GCKW+F+ K + DGT+ + KARLVAKG+ Q  GI F +T+SPV++  T
Sbjct: 58  ILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTAT 117

Query: 964 IRVILTMA 971
           IR IL +A
Sbjct: 118 IRTILNVA 125


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
            chrM:68918-69253 REVERSE
          Length = 111

 Score = 70.5 bits (171), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 48/77 (62%)

Query: 1171 YLTWTRPDICYAVNKLSQFMQSPSSAHWEALKRLLRYLKSTIDYGIKITPQSAFHFHAFS 1230
            YLT TRPD+ +AVN+LSQF  +  +A  +A+ ++L Y+K T+  G+  +  S     AF+
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 1231 DADWXGDPLDRSSTTGY 1247
            D+DW   P  R S TG+
Sbjct: 62   DSDWASCPDTRRSVTGF 78


>AT5G48050.1 | Symbols:  | unknown protein | chr5:19472661-19473770
           REVERSE
          Length = 369

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 13/185 (7%)

Query: 5   LKLSPQNYPSWRAQIVPVLRGHNLLGYVDRSLPCPSPIISKDGEDIANPDYEHWICQDXL 64
           L L+  NY  WR     +     +LG++D S   P+P+  K            W  +D L
Sbjct: 26  LDLNKLNYDVWRELFETLCLSFGVLGHIDGS-STPTPMTEK-----------RWKERDGL 73

Query: 65  XXXXXXXXXXXXXXXXXXNAE-TAADAWDKVQTTCANKSATRVLSLREKLSNCKRDSKSV 123
                                 TA D W  ++    +    R L    +L     D  SV
Sbjct: 74  VKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSV 133

Query: 124 QEYLQNITVISDALALSGSPVSDVDLVINTLNGIGSDFRDIAAAVRARDSIITFAELEDK 183
            EY Q +  +SD L    SP+SD  LV++ LNG+   +  I   ++ +    +F E    
Sbjct: 134 HEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSM 193

Query: 184 LLAHE 188
           LL  E
Sbjct: 194 LLMEE 198