Jatropha Genome Database

JcCB0118121.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0118121.20 - phase: 0 
         (713 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G53260.1 | Symbols: PAL2, ATPAL2 | PAL2; phenylalanine ammoni...  1257   0.0  
AT2G37040.1 | Symbols: pal1, ATPAL1 | pal1 (Phe ammonia lyase 1)...  1256   0.0  
AT3G10340.1 | Symbols: PAL4 | PAL4 (Phenylalanine ammonia-lyase ...  1201   0.0  
AT5G04230.1 | Symbols: PAL3, ATPAL3 | PAL3 (PHENYL ALANINE AMMON...  1060   0.0  

>AT3G53260.1 | Symbols: PAL2, ATPAL2 | PAL2; phenylalanine
           ammonia-lyase | chr3:19744256-19746619 REVERSE
          Length = 717

 Score = 1257 bits (3253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/692 (85%), Positives = 645/692 (93%)

Query: 22  DPLSWGVAAESMKGSHLDEVKKMVSEYRKPLVKLGGETLTVAQVAAIASHDADVKVELAE 81
           DPL+WG+AA+ MKGSHLDEVKKMV EYR+P+V LGGETLT+ QVAAI++    VKVELAE
Sbjct: 26  DPLNWGLAADQMKGSHLDEVKKMVEEYRRPVVNLGGETLTIGQVAAISTVGGSVKVELAE 85

Query: 82  SARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQRELIRFLNAGIFGNG 141
           ++RAGVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRTK G ALQ ELIRFLNAGIFGN 
Sbjct: 86  TSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFLNAGIFGNT 145

Query: 142 TETCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASG 201
            ETCHTLP SATRAAMLVR+NTLLQGYSGIRFEILEAIT LLNHNI+P LPLRGTITASG
Sbjct: 146 KETCHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITSLLNHNISPSLPLRGTITASG 205

Query: 202 DLVPLSYIAGLLTGRPNSKAIGPTGESLDAVEAFRLAGIDSGFFELQPKEGLALVNGTAV 261
           DLVPLSYIAGLLTGRPNSKA GP GESL A EAF  AGI +GFF+LQPKEGLALVNGTAV
Sbjct: 206 DLVPLSYIAGLLTGRPNSKATGPDGESLTAKEAFEKAGISTGFFDLQPKEGLALVNGTAV 265

Query: 262 GSGLASMVLFEANVLAVLSEILSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHI 321
           GSG+ASMVLFEANV AVL+E+LSAIFAEVM+GKPEFTDHLTH+LKHHPGQIEAAAIMEHI
Sbjct: 266 GSGMASMVLFEANVQAVLAEVLSAIFAEVMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHI 325

Query: 322 LDGSSYIKAAKQLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDN 381
           LDGSSY+K A+++HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TKSIEREINSVNDN
Sbjct: 326 LDGSSYMKLAQKVHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKSIEREINSVNDN 385

Query: 382 PLIDVSRNKALHGGNFQGTPIGVSMDNARLAIASIGKLMFAQFSELVNDFYNNGLPSNLS 441
           PLIDVSRNKA+HGGNFQGTPIGVSMDN RLAIA+IGKLMFAQFSELVNDFYNNGLPSNL+
Sbjct: 386 PLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLT 445

Query: 442 GGRNPSLDYGFKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDVNSLGLISSRKTQEA 501
              NPSLDYGFKGAEIAMASYCSELQ+LANPVTSHVQSAEQHNQDVNSLGLISSRKT EA
Sbjct: 446 ASSNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEA 505

Query: 502 IDILKLMSSTFLVALCQAIDLRHLEENLKHAVKNTVTQVAKRVLTTGGNGELHPSRFCGK 561
           +DILKLMS+TFLV +CQA+DLRHLEENL+  VKNTV+QVAK+VLTTG NGELHPSRFC K
Sbjct: 506 VDILKLMSTTFLVGICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGINGELHPSRFCEK 565

Query: 562 DLLKAVDREQVFAYIDDPCSATYPLMQKLRQVLVEHALANGENEKNASTSVFEKIGAFEE 621
           DLLK VDREQVF Y+DDPCSATYPLMQ+LRQV+V+HAL+NGE EKNA TS+F+KIGAFEE
Sbjct: 566 DLLKVVDREQVFTYVDDPCSATYPLMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEE 625

Query: 622 ELKTLLPKEVESAREAYESGSAAIGNKIKECRSYPLYKFVREELGSGLLTGEKVRSPGEE 681
           ELK +LPKEVE+AR AY +G+A I N+IKECRSYPLY+FVREELG+ LLTGEKV SPGEE
Sbjct: 626 ELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSPGEE 685

Query: 682 FDKVFTAMCEGKIIDPMMECLKEWNGAPLPIC 713
           FDKVFTAMCEGK+IDP+M+CLKEWNGAP+PIC
Sbjct: 686 FDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC 717


>AT2G37040.1 | Symbols: pal1, ATPAL1 | pal1 (Phe ammonia lyase 1);
           phenylalanine ammonia-lyase | chr2:15557602-15560237
           REVERSE
          Length = 725

 Score = 1256 bits (3251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/692 (85%), Positives = 648/692 (93%)

Query: 22  DPLSWGVAAESMKGSHLDEVKKMVSEYRKPLVKLGGETLTVAQVAAIASHDADVKVELAE 81
           DPL+WG AAE MKGSHLDEVK+MV+E+RKP+V LGGETLT+ QVAAI++    VKVEL+E
Sbjct: 34  DPLNWGAAAEQMKGSHLDEVKRMVAEFRKPVVNLGGETLTIGQVAAISTIGNSVKVELSE 93

Query: 82  SARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQRELIRFLNAGIFGNG 141
           +ARAGV ASSDWVM+SMNKGTDSYGVTTGFGATSHRRTK G ALQ+ELIRFLNAGIFG+ 
Sbjct: 94  TARAGVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGVALQKELIRFLNAGIFGST 153

Query: 142 TETCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASG 201
            ET HTLPHSATRAAMLVRINTLLQG+SGIRFEILEAIT  LN+NITP LPLRGTITASG
Sbjct: 154 KETSHTLPHSATRAAMLVRINTLLQGFSGIRFEILEAITSFLNNNITPSLPLRGTITASG 213

Query: 202 DLVPLSYIAGLLTGRPNSKAIGPTGESLDAVEAFRLAGIDSGFFELQPKEGLALVNGTAV 261
           DLVPLSYIAGLLTGRPNSKA GP GE+L A EAF+LAGI SGFF+LQPKEGLALVNGTAV
Sbjct: 214 DLVPLSYIAGLLTGRPNSKATGPNGEALTAEEAFKLAGISSGFFDLQPKEGLALVNGTAV 273

Query: 262 GSGLASMVLFEANVLAVLSEILSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHI 321
           GSG+ASMVLFE NVL+VL+EILSA+FAEVM+GKPEFTDHLTH+LKHHPGQIEAAAIMEHI
Sbjct: 274 GSGMASMVLFETNVLSVLAEILSAVFAEVMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHI 333

Query: 322 LDGSSYIKAAKQLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDN 381
           LDGSSY+K A++LHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR++TKSIEREINSVNDN
Sbjct: 334 LDGSSYMKLAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRYATKSIEREINSVNDN 393

Query: 382 PLIDVSRNKALHGGNFQGTPIGVSMDNARLAIASIGKLMFAQFSELVNDFYNNGLPSNLS 441
           PLIDVSRNKA+HGGNFQGTPIGVSMDN RLAIA+IGKLMFAQFSELVNDFYNNGLPSNL+
Sbjct: 394 PLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLT 453

Query: 442 GGRNPSLDYGFKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDVNSLGLISSRKTQEA 501
             RNPSLDYGFKGAEIAMASYCSELQ+LANPVTSHVQSAEQHNQDVNSLGLISSRKT EA
Sbjct: 454 ASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEA 513

Query: 502 IDILKLMSSTFLVALCQAIDLRHLEENLKHAVKNTVTQVAKRVLTTGGNGELHPSRFCGK 561
           +DILKLMS+TFLVA+CQA+DLRHLEENL+  VKNTV+QVAK+VLTTG NGELHPSRFC K
Sbjct: 514 VDILKLMSTTFLVAICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGVNGELHPSRFCEK 573

Query: 562 DLLKAVDREQVFAYIDDPCSATYPLMQKLRQVLVEHALANGENEKNASTSVFEKIGAFEE 621
           DLLK VDREQV+ Y DDPCSATYPL+QKLRQV+V+HAL NGE+EKNA TS+F KIGAFEE
Sbjct: 574 DLLKVVDREQVYTYADDPCSATYPLIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEE 633

Query: 622 ELKTLLPKEVESAREAYESGSAAIGNKIKECRSYPLYKFVREELGSGLLTGEKVRSPGEE 681
           ELK +LPKEVE+AR AY++G++AI N+IKECRSYPLY+FVREELG+ LLTGEKV SPGEE
Sbjct: 634 ELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEKVTSPGEE 693

Query: 682 FDKVFTAMCEGKIIDPMMECLKEWNGAPLPIC 713
           FDKVFTA+CEGKIIDPMMECL EWNGAP+PIC
Sbjct: 694 FDKVFTAICEGKIIDPMMECLNEWNGAPIPIC 725


>AT3G10340.1 | Symbols: PAL4 | PAL4 (Phenylalanine ammonia-lyase 4);
           ammonia ligase/ ammonia-lyase/ catalytic |
           chr3:3204260-3207809 FORWARD
          Length = 707

 Score = 1201 bits (3108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/697 (82%), Positives = 630/697 (90%), Gaps = 2/697 (0%)

Query: 18  CITRDPLSWGVAAESMKGSHLDEVKKMVSEYRKPLVKLGGETLTVAQVAAIASHDADVKV 77
            ++ DPL+W   AE++KGSHLDEVK+MV EYRK  VKLGGETLT+ QVAA+A       V
Sbjct: 12  AVSGDPLNWNATAEALKGSHLDEVKRMVKEYRKEAVKLGGETLTIGQVAAVARGGGGSTV 71

Query: 78  ELAESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQRELIRFLNAGI 137
           ELAE ARAGVKASS+WVM+SMN+GTDSYGVTTGFGATSHRRTKQG ALQ ELIRFLNAGI
Sbjct: 72  ELAEEARAGVKASSEWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGI 131

Query: 138 FGNGT-ETCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGT 196
           FG G  +T HTLP   TRAAMLVR+NTLLQGYSGIRFEILEAITKLLNH ITPCLPLRGT
Sbjct: 132 FGPGAGDTSHTLPKPTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHEITPCLPLRGT 191

Query: 197 ITASGDLVPLSYIAGLLTGRPNSKAIGPTGESLDAVEAFRLAGIDSGFFELQPKEGLALV 256
           ITASGDLVPLSYIAGLLTGRPNSKA+GP+GE+L A EAF+LAG+ S FFELQPKEGLALV
Sbjct: 192 ITASGDLVPLSYIAGLLTGRPNSKAVGPSGETLTASEAFKLAGVSS-FFELQPKEGLALV 250

Query: 257 NGTAVGSGLASMVLFEANVLAVLSEILSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAA 316
           NGTAVGSGLAS VLF+AN+LAVLSE++SA+FAEVM GKPEFTDHLTHKLKHHPGQIEAAA
Sbjct: 251 NGTAVGSGLASTVLFDANILAVLSEVMSAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAAA 310

Query: 317 IMEHILDGSSYIKAAKQLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREIN 376
           IMEHILDGSSY+K A+ LHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREIN
Sbjct: 311 IMEHILDGSSYVKEAQLLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREIN 370

Query: 377 SVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNARLAIASIGKLMFAQFSELVNDFYNNGL 436
           SVNDNPLIDVSRNKALHGGNFQGTPIGV+MDN+RLAIASIGKLMFAQFSELVNDFYNNGL
Sbjct: 371 SVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNSRLAIASIGKLMFAQFSELVNDFYNNGL 430

Query: 437 PSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDVNSLGLISSR 496
           PSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVT+HVQSAEQHNQDVNSLGLISSR
Sbjct: 431 PSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSR 490

Query: 497 KTQEAIDILKLMSSTFLVALCQAIDLRHLEENLKHAVKNTVTQVAKRVLTTGGNGELHPS 556
           KT EA+DILKLMS+T+LVALCQA+DLRHLEENLK AVK+ V+QVAKRVLT G NGELHPS
Sbjct: 491 KTAEAVDILKLMSTTYLVALCQAVDLRHLEENLKKAVKSAVSQVAKRVLTVGANGELHPS 550

Query: 557 RFCGKDLLKAVDREQVFAYIDDPCSATYPLMQKLRQVLVEHALANGENEKNASTSVFEKI 616
           RF  +D+L+ VDRE VF+Y DDPCS TYPLMQKLR +LV+HALA+ E E N++TSVF KI
Sbjct: 551 RFTERDVLQVVDREYVFSYADDPCSLTYPLMQKLRHILVDHALADPEREANSATSVFHKI 610

Query: 617 GAFEEELKTLLPKEVESAREAYESGSAAIGNKIKECRSYPLYKFVREELGSGLLTGEKVR 676
           GAFE ELK LLPKEVE  R  YE G++AI N+IKECRSYPLY+FVR+EL + LLTGE VR
Sbjct: 611 GAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDELNTELLTGENVR 670

Query: 677 SPGEEFDKVFTAMCEGKIIDPMMECLKEWNGAPLPIC 713
           SPGEEFDKVF A+ +GK+IDP++ECLKEWNGAP+ IC
Sbjct: 671 SPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSIC 707


>AT5G04230.1 | Symbols: PAL3, ATPAL3 | PAL3 (PHENYL ALANINE
           AMMONIA-LYASE 3); phenylalanine ammonia-lyase |
           chr5:1160831-1163707 FORWARD
          Length = 694

 Score = 1060 bits (2742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/695 (74%), Positives = 586/695 (84%), Gaps = 16/695 (2%)

Query: 22  DPLSWGVAAESMKGSHLDEVKKMVSEYRKPLVKLGGETLTVAQVAAIASHDADVKVELAE 81
           DPL+W VAAE++KGSHL+EVKKMV +YRK  V+LGGETLT+ QVAA+AS      VEL+E
Sbjct: 13  DPLNWNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVAS--GGPTVELSE 70

Query: 82  SARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQRELIRFLNAGIFGNG 141
            AR GVKASSDWVM+SMN+ TD+YG+TTGFG++S RRT QGAALQ+ELIR+LNAGIF  G
Sbjct: 71  EARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFATG 130

Query: 142 TET---CHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTIT 198
            E     +TLP  ATRAAML+R+NTLLQGYSGIRFEILEAIT LLN  ITP LPLRGTIT
Sbjct: 131 NEDDDRSNTLPRPATRAAMLIRVNTLLQGYSGIRFEILEAITTLLNCKITPLLPLRGTIT 190

Query: 199 ASGDLVPLSYIAGLLTGRPNSKAIGPTGESLDAVEAFRLAGIDSGFFELQPKEGLALVNG 258
           ASGDLVPLSYIAG L GRPNS+++GP+GE L A+EAF+LAG+ S FFEL+PKEGLALVNG
Sbjct: 191 ASGDLVPLSYIAGFLIGRPNSRSVGPSGEILTALEAFKLAGV-SSFFELRPKEGLALVNG 249

Query: 259 TAVGSGLASMVLFEANVLAVLSEILSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIM 318
           TAVGS LAS VL++AN+L V SE+ SA+FAEVM GKPEFTDHLTHKLKHHPGQIEAAAIM
Sbjct: 250 TAVGSALASTVLYDANILVVFSEVASAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIM 309

Query: 319 EHILDGSSYIKAAKQLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSV 378
           EHILDGSSY+K A  LH+IDPLQKPKQDRYALRTSPQWLGPQIEVIR +TK IEREINSV
Sbjct: 310 EHILDGSSYVKEALHLHKIDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSV 369

Query: 379 NDNPLIDVSRNKALHGGNFQGTPIGVSMDNARLAIASIGKLMFAQFSELVNDFYNNGLPS 438
           NDNPLIDVSRNKA+HGGNFQGTPIGV+MDN RLA+ASIGKLMFAQF+ELVNDFYNNGLPS
Sbjct: 370 NDNPLIDVSRNKAIHGGNFQGTPIGVAMDNTRLALASIGKLMFAQFTELVNDFYNNGLPS 429

Query: 439 NLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDVNSLGLISSRKT 498
           NLSGGRNPSLDYG KGAE+AMASYCSELQFLANPVT+HV+SA QHNQDVNSLGLISSR T
Sbjct: 430 NLSGGRNPSLDYGLKGAEVAMASYCSELQFLANPVTNHVESASQHNQDVNSLGLISSRTT 489

Query: 499 QEAIDILKLMSSTFLVALCQAIDLRHLEENLKHAVKNTVTQVAKRVLTTGGNGELHPSRF 558
            EA+ ILKLMS+T+LVALCQA DLRHLEE LK AV   V+  AK VL       + P R 
Sbjct: 490 AEAVVILKLMSTTYLVALCQAFDLRHLEEILKKAVNEVVSHTAKSVLA------IEPFR- 542

Query: 559 CGKDLLKAVDREQVFAYIDDPCSATYPLMQKLRQVLVEHALANGENEKNASTSVFEKIGA 618
              D+L  V+RE VF+Y+DDP S T PLMQKLR VL + ALA  E E +   +VF KIGA
Sbjct: 543 KHDDILGVVNREYVFSYVDDPSSLTNPLMQKLRHVLFDKALAEPEGETD---TVFRKIGA 599

Query: 619 FEEELKTLLPKEVESAREAYESGSAAIGNKIKECRSYPLYKFVREELGSGLLTGEKVRSP 678
           FE ELK LLPKEVE  R  YE+G+  + N+IK+CRSYPLY+FVR EL + LLTGE VRSP
Sbjct: 600 FEAELKFLLPKEVERVRTEYENGTFNVANRIKKCRSYPLYRFVRNELETRLLTGEDVRSP 659

Query: 679 GEEFDKVFTAMCEGKIIDPMMECLKEWNGAPLPIC 713
           GE+FDKVF A+ +GK+IDP+ ECLKEWNGAP+ IC
Sbjct: 660 GEDFDKVFRAISQGKLIDPLFECLKEWNGAPISIC 694