Jatropha Genome Database
- JcCB0116941.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0116941.10 + phase: 0
(148 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzy... 293 2e-80
AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzy... 293 2e-80
AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 293 2e-80
AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 293 2e-80
AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME... 292 4e-80
AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME... 291 7e-80
AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 290 3e-79
AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 290 3e-79
AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11 (UBIQUITIN-CONJUGA... 284 1e-77
AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 282 4e-77
AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 282 5e-77
AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzy... 278 1e-75
AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzy... 278 1e-75
AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating enzy... 276 2e-75
AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 271 1e-73
AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating enzy... 245 7e-66
AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 209 7e-55
AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme 10... 207 2e-54
AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9... 165 1e-41
AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 152 1e-37
AT1G78870.2 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 149 5e-37
AT1G78870.1 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 145 1e-35
AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme... 144 2e-35
AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating enzy... 142 7e-35
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2 (UBIQUITING-CONJUGA... 142 8e-35
AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER PR... 142 8e-35
AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER PR... 142 8e-35
AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9... 139 6e-34
AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 133 5e-32
AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating enzy... 127 2e-30
AT3G24515.1 | Symbols: UBC37 | UBC37 (ubiquitin-conjugating enzy... 122 8e-29
AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /... 117 4e-27
AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein bi... 117 4e-27
AT2G32790.1 | Symbols: | ubiquitin-conjugating enzyme, putative... 113 4e-26
AT1G78870.3 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 111 2e-25
AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating enzy... 109 5e-25
AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating enzy... 108 1e-24
AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating enzy... 103 3e-23
AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzy... 100 3e-22
AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzy... 100 3e-22
AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE... 99 8e-22
AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme... 98 2e-21
AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); ... 97 3e-21
AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); ... 97 3e-21
AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN CONJUGATIN... 95 2e-20
AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme... 94 2e-20
AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating enzy... 94 4e-20
AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzy... 91 2e-19
AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative | ch... 90 6e-19
AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER PR... 89 1e-18
AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating enzy... 84 3e-17
AT1G75440.1 | Symbols: UBC16 | UBC16 (ubiquitin-conjugating enzy... 79 1e-15
AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | ATUBC2-1; ubiquitin-pro... 77 5e-15
AT5G42990.1 | Symbols: UBC18 | UBC18 (ubiquitin-conjugating enzy... 76 8e-15
AT1G17280.2 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzy... 75 2e-14
AT1G17280.1 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzy... 75 2e-14
AT5G50430.2 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzy... 75 2e-14
AT5G50430.1 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzy... 75 2e-14
AT4G36410.1 | Symbols: UBC17 | UBC17 (UBIQUITIN-CONJUGATING ENZY... 73 7e-14
AT3G15355.1 | Symbols: UBC25, PFU1 | UBC25 (UBIQUITIN-CONJUGATIN... 62 1e-10
AT1G53020.1 | Symbols: UBC26, PFU3 | UBC26 (UBIQUITIN-CONJUGATIN... 62 2e-10
AT2G16920.1 | Symbols: UBC23, PFU2 | UBC23 (UBIQUITIN-CONJUGATIN... 58 3e-09
AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | PHO2 (PHOSPHATE 2)... 56 6e-09
AT5G50430.3 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzy... 56 8e-09
>AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21632802-21633989
REVERSE
Length = 148
Score = 293 bits (751), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/148 (94%), Positives = 146/148 (98%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTDK KY+STARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148
>AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21632802-21633989
REVERSE
Length = 148
Score = 293 bits (751), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/148 (94%), Positives = 146/148 (98%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTDK KY+STARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148
>AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 148
Score = 293 bits (751), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 138/148 (93%), Positives = 146/148 (98%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKVFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTD+ KY+STARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 148
Score = 293 bits (751), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 138/148 (93%), Positives = 146/148 (98%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKVFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTD+ KY+STARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917203
REVERSE
Length = 148
Score = 292 bits (748), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 139/148 (93%), Positives = 146/148 (98%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTDK KY+STAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148
>AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917293
REVERSE
Length = 178
Score = 291 bits (746), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 139/148 (93%), Positives = 146/148 (98%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDY
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTDK KY+STAR+WTQKYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178
>AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 148
Score = 290 bits (741), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 136/148 (91%), Positives = 145/148 (97%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTD+ KY++TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148
>AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 148
Score = 290 bits (741), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 136/148 (91%), Positives = 145/148 (97%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTD+ KY++TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148
>AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11
(UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein
ligase | chr3:2641487-2642489 FORWARD
Length = 148
Score = 284 bits (727), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 133/148 (89%), Positives = 145/148 (97%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPP++CSAGPVAEDMFHWQATI+GP +SPYAGGVFLV+IHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKV+F+TKV+HPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAHM KTD+ KY+STARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148
>AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 149
Score = 282 bits (722), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 135/149 (90%), Positives = 144/149 (96%), Gaps = 1/149 (0%)
Query: 1 MASKRILKELKDLQRDPPTSC-SAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPD 59
MASKRILKELKDLQ+DPPTSC AGPVAEDMFHWQATI+GP +SPY+GGVFLVTIHFPPD
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 60 YPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
YPFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL
Sbjct: 61 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120
Query: 120 VPEIAHMCKTDKVKYDSTARSWTQKYAMG 148
VPEIAHM KTD+ KY++TAR+WTQKYAMG
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAMG 149
>AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 157
Score = 282 bits (722), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 137/157 (87%), Positives = 145/157 (92%), Gaps = 9/157 (5%)
Query: 1 MASKRILKELKDLQRDPPTSCSAG---------PVAEDMFHWQATIIGPNDSPYAGGVFL 51
MASKRILKELKDLQ+DPPTSCSA PVAEDMFHWQATI+GP+DSPY+GGVFL
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAEVSGHCYGTCPVAEDMFHWQATIMGPSDSPYSGGVFL 60
Query: 52 VTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLT 111
VTIHFPPDYPFKPPKVAFRTKVFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLT
Sbjct: 61 VTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLT 120
Query: 112 DPNPDDPLVPEIAHMCKTDKVKYDSTARSWTQKYAMG 148
DPNPDDPLVPEIAHM KTD+ KY+STARSWTQKYAMG
Sbjct: 121 DPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 157
>AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzyme
30); ubiquitin-protein ligase | chr5:22729756-22730964
FORWARD
Length = 148
Score = 278 bits (710), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/148 (87%), Positives = 141/148 (95%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRI KEL+DLQRDPP SCSAGP +DMF WQATI+GP DSP+AGGVFLVTIHFPPDY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKV+HPNINSNG+ICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAH+ KTD+VKY+STA+SWTQKYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148
>AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzyme
30); ubiquitin-protein ligase | chr5:22729756-22730964
FORWARD
Length = 148
Score = 278 bits (710), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/148 (87%), Positives = 141/148 (95%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRI KEL+DLQRDPP SCSAGP +DMF WQATI+GP DSP+AGGVFLVTIHFPPDY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKVAFRTKV+HPNINSNG+ICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAMG 148
PEIAH+ KTD+VKY+STA+SWTQKYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148
>AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating enzyme
29); ubiquitin-protein ligase | chr2:7267880-7268737
FORWARD
Length = 148
Score = 276 bits (707), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 128/147 (87%), Positives = 139/147 (94%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MA++RILKELK+LQRDPP SCSAGP EDMFHWQATI+GPN+SPY+GGVFLV IHFPPDY
Sbjct: 1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
PFKPPKV FRTKVFHPNINSNGNICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 121 PEIAHMCKTDKVKYDSTARSWTQKYAM 147
PEIAH+ KTDK KY++ ARSWTQKYA+
Sbjct: 121 PEIAHIYKTDKTKYEAMARSWTQKYAL 147
>AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 190
Score = 271 bits (693), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/190 (72%), Positives = 145/190 (76%), Gaps = 42/190 (22%)
Query: 1 MASKRILKELKDLQRDPPTSCSA------------------------------------- 23
MASKRILKELKDLQ+DPPTSCSA
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAVDNASKLLVLIELEDCCRRFSNCSCILLLEKSQDIAM 60
Query: 24 -----GPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNI 78
PVAEDMFHWQATI+GP+DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+
Sbjct: 61 AHVLLCPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNV 120
Query: 79 NSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKVKYDSTA 138
NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM KTD+ KY+STA
Sbjct: 121 NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTA 180
Query: 139 RSWTQKYAMG 148
RSWTQKYAMG
Sbjct: 181 RSWTQKYAMG 190
>AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating enzyme
12); small conjugating protein ligase/ ubiquitin-protein
ligase | chr3:2643482-2644545 FORWARD
Length = 149
Score = 245 bits (626), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/149 (77%), Positives = 133/149 (89%), Gaps = 1/149 (0%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAE-DMFHWQATIIGPNDSPYAGGVFLVTIHFPPD 59
MASKRI +EL+D+QR PP +CSAGPVAE D+FHWQATI+GP+DSPY+GGVF V+I F D
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSD 60
Query: 60 YPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 119
YPFKPPKV F+TKV+HPNI+S G+ICLDILKEQWSPA T SKVLLSICSLLTDPNP+DPL
Sbjct: 61 YPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPL 120
Query: 120 VPEIAHMCKTDKVKYDSTARSWTQKYAMG 148
VPEIAH+ K DK KY+STA+ WTQKYAMG
Sbjct: 121 VPEIAHLYKVDKSKYESTAQKWTQKYAMG 149
>AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677021 FORWARD
Length = 145
Score = 209 bits (531), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 97/104 (93%), Positives = 102/104 (98%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP +SPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLL 104
PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKV L
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTL 104
>AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme 10);
ubiquitin-protein ligase | chr5:21633187-21633989
REVERSE
Length = 109
Score = 207 bits (528), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/109 (91%), Positives = 105/109 (96%), Gaps = 2/109 (1%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYAGGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 61 PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKV--LLSIC 107
PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKV LL C
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVRFLLFFC 109
>AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9);
protein binding / ubiquitin-protein ligase |
chr3:4423569-4424797 REVERSE
Length = 182
Score = 165 bits (417), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 106/145 (73%)
Query: 2 ASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYP 61
+ KRI +E+ +L DPP CSAGP ++++HW ATIIGP+ +PY GG+F + I FP DYP
Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYP 96
Query: 62 FKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
FKPPK+ F+T+++H N+++ G++ ++IL++ WSPALTI+KVL +I S+ P P P +P
Sbjct: 97 FKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALP 156
Query: 122 EIAHMCKTDKVKYDSTARSWTQKYA 146
IA + TD+ K+D A+ WT ++A
Sbjct: 157 VIARLYLTDREKHDEVAKEWTLRFA 181
>AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating
enzyme, putative | chr1:5776550-5778327 REVERSE
Length = 153
Score = 152 bits (383), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 96/145 (66%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
+RI+KE + L +P SA P E+M ++ I+GP SPY GGVF + + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 64 PPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL I
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 124 AHMCKTDKVKYDSTARSWTQKYAMG 148
A K+++ + TA+ WT+ YA G
Sbjct: 128 AKHWKSNEAEAVETAKEWTRLYASG 152
>AT1G78870.2 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29652203 FORWARD
Length = 153
Score = 149 bits (377), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 96/145 (66%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
+RI+KE + L +P SA P ++M ++ I+GP SPY GGVF + + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 64 PPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL I
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 124 AHMCKTDKVKYDSTARSWTQKYAMG 148
A K+++ + TA+ WT+ YA G
Sbjct: 128 AKHWKSNEAEAVDTAKEWTRLYASG 152
>AT1G78870.1 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29652203 FORWARD
Length = 154
Score = 145 bits (365), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 96/146 (65%), Gaps = 1/146 (0%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAG-GVFLVTIHFPPDYPF 62
+RI+KE + L +P SA P ++M ++ I+GP SPY G GVF + + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELFLPEEYPM 67
Query: 63 KPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL
Sbjct: 68 AAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSEN 127
Query: 123 IAHMCKTDKVKYDSTARSWTQKYAMG 148
IA K+++ + TA+ WT+ YA G
Sbjct: 128 IAKHWKSNEAEAVDTAKEWTRLYASG 153
>AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465
FORWARD
Length = 150
Score = 144 bits (363), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 89/134 (66%)
Query: 2 ASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYP 61
A KR++ + K LQ+DPP S P ++ HW A I GP D+P+ GG F +T+HF DYP
Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYP 64
Query: 62 FKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
KPP V F +++FHPNI ++G+ICLDIL+ QWSP ++ VL SI SLL DPNPD P
Sbjct: 65 NKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANA 124
Query: 122 EIAHMCKTDKVKYD 135
E A + +K +Y+
Sbjct: 125 EAARLFSENKREYN 138
>AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating enzyme
31); small conjugating protein ligase/ ubiquitin-protein
ligase | chr1:13683791-13684924 REVERSE
Length = 154
Score = 142 bits (358), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Query: 2 ASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYP 61
A++RI E + + + S G + +++ W A I GP+ +PY GG+F ++I FP DYP
Sbjct: 9 AAQRIAMEYRAMI-SKESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYP 67
Query: 62 FKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
FKPPK F+T ++HPNIN G+IC++ILK++W+PAL + KVLLSI LL PNPDDPLVP
Sbjct: 68 FKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVP 127
Query: 122 EIAHMCKTDKVKYDSTARSWTQKYA 146
EI + K ++ ++D AR +T ++A
Sbjct: 128 EIGQLFKNNRFQFDQRAREFTARHA 152
>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2
(UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein
ligase | chr2:774271-775149 FORWARD
Length = 152
Score = 142 bits (358), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 2 ASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYP 61
A KR++++ K LQ+DPP S P ++ W A I GP+D+P+ GG F +++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 62 FKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
KPP V F +++FHPNI ++G+ICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 122 EIAHMCKTDKVKYDSTAR-----SWT 142
E A M K +Y+ R SWT
Sbjct: 125 EAARMFSESKREYNRRVREVVEQSWT 150
>AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase |
chr1:4927294-4928136 REVERSE
Length = 152
Score = 142 bits (358), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 2 ASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYP 61
A KR++++ K LQ+DPP S P ++ W A I GP+D+P+ GG F +++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 62 FKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
KPP V F +++FHPNI ++G+ICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 122 EIAHMCKTDKVKYDSTAR-----SWT 142
E A M K +Y+ R SWT
Sbjct: 125 EAARMYSESKREYNRRVRDVVEQSWT 150
>AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase |
chr1:4927294-4928136 REVERSE
Length = 152
Score = 142 bits (358), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 2 ASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYP 61
A KR++++ K LQ+DPP S P ++ W A I GP+D+P+ GG F +++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 62 FKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
KPP V F +++FHPNI ++G+ICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 122 EIAHMCKTDKVKYDSTAR-----SWT 142
E A M K +Y+ R SWT
Sbjct: 125 EAARMYSESKREYNRRVRDVVEQSWT 150
>AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9);
protein binding / ubiquitin-protein ligase |
chr3:4423828-4424797 REVERSE
Length = 170
Score = 139 bits (350), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 87/114 (76%)
Query: 2 ASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYP 61
+ KRI +E+ +L DPP CSAGP ++++HW ATIIGP+ +PY GG+F + I FP DYP
Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYP 96
Query: 62 FKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNP 115
FKPPK+ F+T+++H N+++ G++ ++IL++ WSPALTI+KVL +I S+ P P
Sbjct: 97 FKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEP 150
>AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating
enzyme, putative | chr1:5776550-5777903 REVERSE
Length = 120
Score = 133 bits (334), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 81/119 (68%)
Query: 30 MFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDIL 89
M ++ I+GP SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDIL
Sbjct: 1 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 60
Query: 90 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKVKYDSTARSWTQKYAMG 148
K++WSPAL I VLLSI +LL+ PNPDDPL IA K+++ + TA+ WT+ YA G
Sbjct: 61 KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASG 119
>AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating enzyme
27); ubiquitin-protein ligase | chr5:20699626-20700998
REVERSE
Length = 192
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Query: 5 RILKELKDLQRDPPTS-CSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
RI KEL+D +R+ +S P ++++ TI GP +PY GG F + I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 64 PPKVAFRTKVFHPNINS-NGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
PPK+ F TKV+HPNI+S +G ICLDILK+QWSPALT+ L+SI +LL+ P P DP
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAV 125
Query: 123 IAHMCKTDKVKYDSTARSWTQKYA 146
+A + + STAR WT+ +A
Sbjct: 126 VAEQYMKNYQVFVSTARYWTETFA 149
>AT3G24515.1 | Symbols: UBC37 | UBC37 (ubiquitin-conjugating enzyme
37); small conjugating protein ligase/ ubiquitin-protein
ligase | chr3:8934569-8936207 REVERSE
Length = 409
Score = 122 bits (306), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 93/157 (59%), Gaps = 13/157 (8%)
Query: 3 SKRILKELKDLQRDPPTSCS------AGPVAEDMFHWQ---ATIIGPNDSPYAGGVFLVT 53
S R+ KELK L DPP S A + D + A I GP D+ YA G+F +
Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLK 67
Query: 54 IHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDIL----KEQWSPALTISKVLLSICSL 109
I P YPF+PP V+F T ++HPNI+++G ICLDIL K W P+L IS VL S+ L
Sbjct: 68 IQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLL 127
Query: 110 LTDPNPDDPLVPEIAHMCKTDKVKYDSTARSWTQKYA 146
L++PNPDD L+ E++ K ++ +D AR T+KYA
Sbjct: 128 LSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
>AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /
ubiquitin-protein ligase | chr5:8967983-8969173 FORWARD
Length = 157
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 5 RILKELKDLQRDPPTSCSAGPVAED--MFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPF 62
R+ KE K++QR+ + +D +F W A I GP+++PY GGVF + P YP
Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
Query: 63 KPPKVAFRTKVFHPNIN-SNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
Query: 122 EIAHMCKTDKVK-YDSTARSWTQKYAM 147
+ ++ ++ V+ ++S A+ +T+ AM
Sbjct: 127 DSGNLLRSGDVRGFNSMAQMYTRLAAM 153
>AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein
binding / ubiquitin-protein ligase |
chr5:8967983-8969173 FORWARD
Length = 157
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 5 RILKELKDLQRDPPTSCSAGPVAED--MFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPF 62
R+ KE K++QR+ + +D +F W A I GP+++PY GGVF + P YP
Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
Query: 63 KPPKVAFRTKVFHPNIN-SNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
Query: 122 EIAHMCKTDKVK-YDSTARSWTQKYAM 147
+ ++ ++ V+ ++S A+ +T+ AM
Sbjct: 127 DSGNLLRSGDVRGFNSMAQMYTRLAAM 153
>AT2G32790.1 | Symbols: | ubiquitin-conjugating enzyme, putative |
chr2:13905649-13906271 REVERSE
Length = 177
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
Query: 25 PVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNI 84
P E++F W+AT+ GP PY GVF V++H PP YP++PPK+ F+TK+FHPNI+ G I
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEI 113
Query: 85 CLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV--PEIAHMCKTDKVKYDSTARSWT 142
+DIL +WS ALTI+ VLLSICS+L+ NP +PL+ A + + D+ Y+ AR WT
Sbjct: 114 FVDILGSRWSSALTINLVLLSICSILS--NPVEPLLVSNHAARLYQKDRKAYEKVAREWT 171
Query: 143 QKYAMG 148
KYA G
Sbjct: 172 LKYAKG 177
>AT1G78870.3 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29651858 FORWARD
Length = 112
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 68/105 (64%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
+RI+KE + L +P SA P ++M ++ I+GP SPY GGVF + + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 64 PPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICS 108
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLL S
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase |
chr3:7002927-7004283 REVERSE
Length = 181
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 74/123 (60%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
KR+ EL L SA P +++F W+ TI G D+ + G + +++ F DYPFK
Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFK 98
Query: 64 PPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
PKV F T FHPN++ GNICLDIL+++WS A + +LLSI SLL +PN PL +
Sbjct: 99 SPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQA 158
Query: 124 AHM 126
A +
Sbjct: 159 AQL 161
>AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating enzyme
20); ubiquitin-protein ligase | chr1:18705005-18706303
REVERSE
Length = 180
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 75/123 (60%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
KR+ EL L SA P +++F W+ TI G D+ + G + +++ F DYPFK
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFK 97
Query: 64 PPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
PPKV F T FHPN++ GNICLDIL+++WS A + +LLSI SLL +PN PL +
Sbjct: 98 PPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
Query: 124 AHM 126
A +
Sbjct: 158 AQL 160
>AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase |
chr3:7002927-7003727 REVERSE
Length = 136
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 22 SAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 81
SA P +++F W+ TI G D+ + G + +++ F DYPFK PKV F T FHPN++
Sbjct: 12 SAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLY 71
Query: 82 GNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 126
GNICLDIL+++WS A + +LLSI SLL +PN PL + A +
Sbjct: 72 GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQL 116
>AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzyme
22); ubiquitin-protein ligase | chr5:1498727-1499972
REVERSE
Length = 251
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
K++ KELK L PP ED A I GP +PY G+F + + D+P
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 64 PPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
PPK F TK+FHPN+ SNG IC++ LK+ W+P+L + VL + LL +P P+ L +
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQA 132
Query: 124 AHMCKTDKVKYDSTARSWTQKYA 146
M + +Y AR +T +A
Sbjct: 133 GKMLLENYDEYARHARLYTGIHA 155
>AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzyme
22); ubiquitin-protein ligase | chr5:1498727-1499972
REVERSE
Length = 251
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 76/143 (53%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
K++ KELK L PP ED A I GP +PY G+F + + D+P
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 64 PPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
PPK F TK+FHPN+ SNG IC++ LK+ W+P+L + VL + LL +P P+ L +
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQA 132
Query: 124 AHMCKTDKVKYDSTARSWTQKYA 146
M + +Y AR +T +A
Sbjct: 133 GKMLLENYDEYARHARLYTGIHA 155
>AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1
(SUMO CONJUGATION ENZYME 1); SUMO ligase |
chr3:21428831-21430110 REVERSE
Length = 160
Score = 99.4 bits (246), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAE-----DMFHWQATIIGPNDSPYAGGVFLVTIH 55
+A R+ +E K +++ P A P ++ W TI G + + GG F +T+H
Sbjct: 5 IARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMH 64
Query: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
F DYP KPPK F FHPN+ +G +CL IL E W PA+T+ ++L+ I LL P
Sbjct: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDTP 124
Query: 114 NPDDPLVPEIAHMCKTDKVKYDSTARSWTQKY 145
NP DP + H+ D V+Y + +++Y
Sbjct: 125 NPADPAQTDGYHLFCQDPVEYKKRVKLQSKQY 156
>AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme
6); ubiquitin-protein ligase | chr2:18932243-18933421
REVERSE
Length = 183
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
MAS +E+ D+ + + V +D+ + T GP DS Y GGV+ + + P Y
Sbjct: 1 MASPSKRREM-DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAY 59
Query: 61 PFKPPKVAFRTKVFHPNIN-SNGNICLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDP 118
P+K P V F K++HPN++ S+G +CLD++ + WSP + V S LL PNP DP
Sbjct: 60 PYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDP 119
Query: 119 LVPEIAHMCKTDKVKYDSTARSWTQKYA 146
E A + D+ Y+ + + +KYA
Sbjct: 120 FNGEAASLLMRDRAAYELKVKEYCEKYA 147
>AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase |
chr4:17341237-17342148 REVERSE
Length = 184
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Query: 5 RILKELKDLQRDPPTSCSAG--PVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPF 62
R+ K++ +L + P+SCS +D+ +++ +I P+D Y G F+ T P YP
Sbjct: 34 RLHKDISEL--NLPSSCSISFPNGKDDLMNFEVSI-KPDDGYYHNGTFVFTFQVSPVYPH 90
Query: 63 KPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
+ PKV +TKV+HPNI+ GN+CL+IL+E W P L I+ V+ + L T+PN +DPL +
Sbjct: 91 EAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHD 150
Query: 123 IAHMCKTDKVKYDSTAR 139
A + + + +++ R
Sbjct: 151 AAAVLRDNPKLFETNVR 167
>AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase |
chr4:17341237-17342148 REVERSE
Length = 184
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Query: 5 RILKELKDLQRDPPTSCSAG--PVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPF 62
R+ K++ +L + P+SCS +D+ +++ +I P+D Y G F+ T P YP
Sbjct: 34 RLHKDISEL--NLPSSCSISFPNGKDDLMNFEVSI-KPDDGYYHNGTFVFTFQVSPVYPH 90
Query: 63 KPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
+ PKV +TKV+HPNI+ GN+CL+IL+E W P L I+ V+ + L T+PN +DPL +
Sbjct: 91 EAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHD 150
Query: 123 IAHMCKTDKVKYDSTAR 139
A + + + +++ R
Sbjct: 151 AAAVLRDNPKLFETNVR 167
>AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN CONJUGATING
ENZYME 4); ubiquitin-protein ligase |
chr5:16538296-16539956 REVERSE
Length = 187
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 26 VAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGNI 84
+ + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +G++
Sbjct: 25 INDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSV 84
Query: 85 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMCKTDKVKYDSTARSWTQ 143
CLD++ + WSP + V + LL PNP DPL E A + D+ Y+ + + +
Sbjct: 85 CLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCE 144
Query: 144 KYA 146
KYA
Sbjct: 145 KYA 147
>AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme
5); ubiquitin-protein ligase | chr1:23667888-23669003
REVERSE
Length = 185
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 26 VAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGNI 84
+ + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +G++
Sbjct: 25 INDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSV 84
Query: 85 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMCKTDKVKYDSTARSWTQ 143
CLD++ + WSP + V + LL PNP DPL E A + D+ Y+ + + +
Sbjct: 85 CLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCE 144
Query: 144 KYA 146
KYA
Sbjct: 145 KYA 147
>AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating enzyme
14); ubiquitin-protein ligase | chr3:20531520-20532895
FORWARD
Length = 167
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 15 RDPPTSCSAGPVAE-DMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV 73
+ P SAG V E ++F W +I+GP D+ Y GG F + FP +YP PP V F +++
Sbjct: 19 KKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEM 78
Query: 74 FHPNINSNGNICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
+HPN+ S+G +C+ IL E+W+P T+ ++LSI S+L+ PN + P
Sbjct: 79 WHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPAN 138
Query: 121 PEIAHMCKTDKVKY 134
E A + ++ ++
Sbjct: 139 VEAAKEWRDNRAEF 152
>AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzyme
13); ubiquitin-protein ligase | chr3:17096120-17097315
REVERSE
Length = 166
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 14/134 (10%)
Query: 15 RDPPTSCSAGPVAE-DMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV 73
+ P SAG V E ++F W TIIGP D+ Y GG F + FP +YP PP V F + +
Sbjct: 18 KHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDI 77
Query: 74 FHPNINSNGNICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
+HPN+ +G +C+ IL E+W+P T+ ++LSI S+L+ PN + P
Sbjct: 78 WHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPAN 137
Query: 121 PEIAHMCKTDKVKY 134
E A + + ++
Sbjct: 138 VEAAKEWREKRDEF 151
>AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative |
chr2:8073337-8074565 REVERSE
Length = 185
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 5 RILKELKDLQRDPPTSCSAG--PVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPF 62
R+ K++ +L + P SC D+ +++ TI P++ Y G F+ + YP
Sbjct: 35 RLHKDISEL--NLPKSCKISFPNGKNDLMNFEVTI-KPDEGYYLSGNFVFSFQVSNMYPH 91
Query: 63 KPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
+ PKV +TKV+HPNI+ GN+CL+IL+E W P L I+ V+ + L T+PN +DPL E
Sbjct: 92 EAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHE 151
Query: 123 IAHMCKTDKVKYDSTAR 139
A + + + ++ R
Sbjct: 152 AAAVLRDNPKTFEYNVR 168
>AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER
PROTEIN 7); protein binding / ubiquitin-protein ligase |
chr5:23919868-23921291 REVERSE
Length = 198
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 13/119 (10%)
Query: 29 DMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDI 88
++F W TIIGP D+ Y GG F + FP +YP PP V F + ++HPN+ S+G +C+ I
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 89 L-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKVKY 134
L E+W+P T+ ++LSI S+L+ PN + P E A + + ++
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEF 183
>AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating enzyme
32); ubiquitin-protein ligase | chr3:5797296-5799467
FORWARD
Length = 309
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 2 ASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYP 61
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++ I P DYP
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYP 71
Query: 62 FKPPKVAFRTKVFHPN--INSNGNICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
FKPP T PN +N ICL I E W P+ ++ L+++ + + T PN
Sbjct: 72 FKPPSFMLLT----PNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPN 126
>AT1G75440.1 | Symbols: UBC16 | UBC16 (ubiquitin-conjugating enzyme
16); small conjugating protein ligase/ ubiquitin-protein
ligase | chr1:28313623-28314960 FORWARD
Length = 161
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
+A+ R+ KEL + Q +PPT V +++ W +IG + YA + + + FP Y
Sbjct: 15 IATNRLQKELVEWQMNPPTGFKHK-VTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHY 73
Query: 61 PFKPPKVAFRTKV-FHPNINSNGNICLDILKEQWSPALTISKV 102
P + P+V F HP+I SNG+ICLDIL + WSPA+T+S +
Sbjct: 74 PMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSI 116
>AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | ATUBC2-1;
ubiquitin-protein ligase | chr1:17031337-17032967
FORWARD
Length = 161
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
+A R+ KEL + Q +PPT V +++ W + G + YA + + + FP Y
Sbjct: 15 IACNRLQKELSEWQLNPPTGFRHK-VTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHY 73
Query: 61 PFKPPKVAFRTKV-FHPNINSNGNICLDILKEQWSPALTISKV 102
P + P+V F + HP+I SNG+ICLDIL + WSPA+T++ V
Sbjct: 74 PMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSV 116
>AT5G42990.1 | Symbols: UBC18 | UBC18 (ubiquitin-conjugating enzyme
18); small conjugating protein ligase/ ubiquitin-protein
ligase | chr5:17244206-17245904 REVERSE
Length = 161
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
+A R+ KEL + Q +PPT V +++ W + G + YA + + + FP Y
Sbjct: 15 IACNRLQKELSEWQVNPPTGFKHR-VTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHY 73
Query: 61 PFKPPKVAFRTKV-FHPNINSNGNICLDILKEQWSPALTISKV 102
P + P+V F HP+I SNG+ICLDIL + WSPA+T+S V
Sbjct: 74 PMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSV 116
>AT1G17280.2 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzyme
34); ubiquitin-protein ligase | chr1:5917146-5919162
REVERSE
Length = 237
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
KR+ KE + L ++P + A P D+ W + G +P+AGG + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 64 PPKVAFRTKVFHPN--INSNGNICL---DILKEQWSPALTISKVLLSICSLLTDPNP 115
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 68 PPGITMTT----PNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>AT1G17280.1 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzyme
34); ubiquitin-protein ligase | chr1:5917146-5919162
REVERSE
Length = 237
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
KR+ KE + L ++P + A P D+ W + G +P+AGG + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 64 PPKVAFRTKVFHPN--INSNGNICL---DILKEQWSPALTISKVLLSICSLLTDPNP 115
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 68 PPGITMTT----PNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>AT5G50430.2 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzyme
33); ubiquitin-protein ligase | chr5:20534366-20536307
REVERSE
Length = 243
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
KR+ KE + L ++P + A P D+ W + G +P+AGG + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 64 PPKVAFRTKVFHPN--INSNGNICL---DILKEQWSPALTISKVLLSICSLLTDPNP 115
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 68 PPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>AT5G50430.1 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzyme
33); ubiquitin-protein ligase | chr5:20534366-20536307
REVERSE
Length = 243
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
KR+ KE + L ++P + A P D+ W + G +P+AGG + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 64 PPKVAFRTKVFHPN--INSNGNICL---DILKEQWSPALTISKVLLSICSLLTDPNP 115
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 68 PPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>AT4G36410.1 | Symbols: UBC17 | UBC17 (UBIQUITIN-CONJUGATING ENZYME
17); small conjugating protein ligase/ ubiquitin-protein
ligase | chr4:17201969-17202890 FORWARD
Length = 161
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 1 MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60
+A+ R+ KE + Q +PP+ V++++ W + G + YA + + + FP Y
Sbjct: 15 IATNRLQKEFMEWQTNPPSGFKHR-VSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHY 73
Query: 61 PFKPPKVAFRTKV-FHPNINSNGNICLDILKEQWSPALTISKVLLSIC 107
P + P+V F+ HP+I SNG+ICLD+L + WSPA+ +S SIC
Sbjct: 74 PMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLS----SIC 117
>AT3G15355.1 | Symbols: UBC25, PFU1 | UBC25 (UBIQUITIN-CONJUGATING
ENZYME 25); small conjugating protein ligase |
chr3:5183858-5186669 FORWARD
Length = 609
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 3 SKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPF 62
+KRI E + L++D P M +A IIG +PY G+F I FP YP
Sbjct: 334 AKRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPS 393
Query: 63 KPPKVAFRTKVF--HPNINSNGNICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
PP V + + +PN+ + G +CL +L +E+W P T+ +VL+SI L+ +
Sbjct: 394 TPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILN 453
Query: 113 PNPDDPLVPEIAHMCKTDKVKYDSTARSWTQ 143
P E + +ST++++++
Sbjct: 454 ---QKPYFNEPGYERSAGSAHGESTSKAYSE 481
>AT1G53020.1 | Symbols: UBC26, PFU3 | UBC26 (UBIQUITIN-CONJUGATING
ENZYME 26); ubiquitin-protein ligase |
chr1:19751372-19759474 REVERSE
Length = 1163
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
K++ + K L+ D P + S M +A IIG +PY G+F I FP YP
Sbjct: 274 KKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 333
Query: 64 PPKVAFRTKVF--HPNINSNGNICLDIL-------KEQWSP-ALTISKVLLSICSLLTDP 113
PP V + + +PN+ + G +CL +L +E+W P T+ ++L+SI +L+ +
Sbjct: 334 PPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNE 393
Query: 114 NP 115
P
Sbjct: 394 KP 395
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
K I KE K L ++ P + + +A IIG +PY G+F I FP YP
Sbjct: 608 KDIQKEWKILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 667
Query: 64 PPKVAFRTKVF--HPNINSNGNICLDIL-------KEQWSP-ALTISKVLLSICSLLTDP 113
PPKV + + +PN+ G +CL ++ +E+W P T+ ++L+SI +L+ +
Sbjct: 668 PPKVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNE 727
Query: 114 NP 115
P
Sbjct: 728 KP 729
>AT2G16920.1 | Symbols: UBC23, PFU2 | UBC23 (UBIQUITIN-CONJUGATING
ENZYME 23); small conjugating protein ligase/
ubiquitin-protein ligase | chr2:7334559-7338827 REVERSE
Length = 1102
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
K++ ++ K LQ + P + M +A I+G +PY G+F H P DYP
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSV 912
Query: 64 PPKVAFRTK--VFHPNINSNGNICLDIL-------KEQWSP-ALTISKVLLSICSLLTDP 113
PP + + +PN+ G +CL +L E W P + +I +VL+S+ L+ +
Sbjct: 913 PPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNS 972
Query: 114 NP 115
P
Sbjct: 973 KP 974
>AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | PHO2 (PHOSPHATE 2);
ubiquitin-protein ligase | chr2:14277785-14281482
REVERSE
Length = 907
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
K++ +E +L+ + P + E M +A ++G +PY G+F I PP YP +
Sbjct: 665 KKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHE 724
Query: 64 PPKVAFRT--KVFHPNINSNGNICLDILKEQWS 94
PP V + + +PN+ +G +CL +L WS
Sbjct: 725 PPMVHYHSGGMRLNPNLYESGRVCLSLLN-TWS 756
>AT5G50430.3 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzyme
33); ubiquitin-protein ligase | chr5:20534366-20536307
REVERSE
Length = 230
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 4 KRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDYPFK 63
KR+ KE + L ++P + A P D+ W+ G + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWR-------------GFYYGKIKFPPEYPYK 54
Query: 64 PPKVAFRTKVFHPN--INSNGNICL---DILKEQWSPALTISKVLLSICSLLTDPNP 115
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 55 PPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 107