Jatropha Genome Database

JcCB0115521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115521.10 - phase: 0 
         (146 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37870.1 | Symbols:  | protease inhibitor/seed storage/lipid ...   134   3e-32
AT3G53980.2 | Symbols:  | protease inhibitor/seed storage/lipid ...    94   3e-20
AT3G53980.1 | Symbols:  | protease inhibitor/seed storage/lipid ...    94   3e-20
AT5G05960.1 | Symbols:  | protease inhibitor/seed storage/lipid ...    92   8e-20

>AT2G37870.1 | Symbols:  | protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein |
           chr2:15859280-15859723 FORWARD
          Length = 115

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/104 (63%), Positives = 82/104 (78%), Gaps = 4/104 (3%)

Query: 41  FLALLIASNAFIGDVNAAGECGKTPIRSAAISLNPCLLAAGNAKASVPPACCSKVGALIN 100
            ++LLI+    +  V AAGECG+ PI  AA SL+PCL A  N +  VPP CC+KVGALI 
Sbjct: 11  LMSLLIS----LASVEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIR 66

Query: 101 TAPKCLCAIILSPLAKQSGINPGIAITIPKRCNIKNRPAGKKCG 144
           T P+CLCA++LSPLAK++GINPGIAI +PKRCNI+NRPAGK+CG
Sbjct: 67  TNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCG 110


>AT3G53980.2 | Symbols:  | protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein |
           chr3:19987760-19988203 REVERSE
          Length = 114

 Score = 93.6 bits (231), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 1/91 (1%)

Query: 55  VNAAGECGKTPIRSAAISLNPCLLAAGNAKASVPPACCSKVGALINTAPKCLCAIILSPL 114
           V+ AGECG++   + A+ L PC  AA +A ++VP  CC+++    +  PKCLCAI+LS  
Sbjct: 21  VDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQI-KRFSQNPKCLCAILLSDT 79

Query: 115 AKQSGINPGIAITIPKRCNIKNRPAGKKCGS 145
           AK SG++P +A+TIPKRCN  NRP G KCG+
Sbjct: 80  AKASGVDPEVALTIPKRCNFANRPVGYKCGA 110


>AT3G53980.1 | Symbols:  | protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein |
           chr3:19987760-19988203 REVERSE
          Length = 114

 Score = 93.6 bits (231), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 1/91 (1%)

Query: 55  VNAAGECGKTPIRSAAISLNPCLLAAGNAKASVPPACCSKVGALINTAPKCLCAIILSPL 114
           V+ AGECG++   + A+ L PC  AA +A ++VP  CC+++    +  PKCLCAI+LS  
Sbjct: 21  VDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQI-KRFSQNPKCLCAILLSDT 79

Query: 115 AKQSGINPGIAITIPKRCNIKNRPAGKKCGS 145
           AK SG++P +A+TIPKRCN  NRP G KCG+
Sbjct: 80  AKASGVDPEVALTIPKRCNFANRPVGYKCGA 110


>AT5G05960.1 | Symbols:  | protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein |
           chr5:1790256-1790694 FORWARD
          Length = 116

 Score = 92.4 bits (228), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 1/108 (0%)

Query: 38  LATFLALLIASNAFIGDVNAAGECGKTPIRSAAISLNPCLLAAGNAKASVPPACCSKVGA 97
           L+    L++   +    V  AGECG+ P    AI L PC +AA +  A V   CC++V  
Sbjct: 6   LSRIFLLVLCIYSLKTMVYGAGECGRNPPDREAIKLAPCAMAAQDTSAKVSAICCARVKQ 65

Query: 98  LINTAPKCLCAIILSPLAKQSGINPGIAITIPKRCNIKNRPAGKKCGS 145
           +    PKCLCA++LS  A+ SG  P I++TIPKRCNI NRP G KCG+
Sbjct: 66  M-GQNPKCLCAVMLSSTARSSGAKPEISMTIPKRCNIANRPVGYKCGA 112