Jatropha Genome Database

JcCB0115461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115461.10 - phase: 0 /partial
         (340 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12050.1 | Symbols:  | fumarylacetoacetase, putative | chr1:4...   582   e-166

>AT1G12050.1 | Symbols:  | fumarylacetoacetase, putative |
           chr1:4072904-4075856 FORWARD
          Length = 421

 Score =  582 bits (1499), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 276/338 (81%), Positives = 304/338 (89%)

Query: 3   LKSFIDVHPDSHFPIQNLPYGVFKPQPSSPPRPAVAIGDYVLDLSEIALAGLFDGPILKG 62
           LKSFIDV  DSHFPIQNLPYGVFKP+ +S PRPAVAIGD VLDLS I+ AGLFDG ILK 
Sbjct: 4   LKSFIDVGSDSHFPIQNLPYGVFKPESNSTPRPAVAIGDLVLDLSAISEAGLFDGLILKD 63

Query: 63  SDCFLQLNLNKFVAMGRPAWKEARATLQKLLSSTEPTLRDNASLRQKSLVLMSKVELLVP 122
           +DCFLQ NLNKF+AMGRPAWKEAR+TLQ++LSS EP LRDN  LR+KS   MSKVE++VP
Sbjct: 64  ADCFLQPNLNKFLAMGRPAWKEARSTLQRILSSNEPILRDNDVLRRKSFHQMSKVEMIVP 123

Query: 123 IAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASSIVISGTDIVRPRG 182
           + IGDYTDFF+SMHHAKNCG +FRGP+N I  NWF LPIAYHGRASSIVISGTDI+RPRG
Sbjct: 124 MVIGDYTDFFASMHHAKNCGLMFRGPENAINPNWFRLPIAYHGRASSIVISGTDIIRPRG 183

Query: 183 QGHPTGNSPPYFGPSMKLDFELEMAAVVGPGNELGKPVDVNEAGDHIFGLVLMNDWSARD 242
           QGHP GNS PYFGPS KLDFELEMAAVVGPGNELGKP+DVN A DHIFGL+LMNDWSARD
Sbjct: 184 QGHPQGNSEPYFGPSKKLDFELEMAAVVGPGNELGKPIDVNNAADHIFGLLLMNDWSARD 243

Query: 243 IQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYDIS 302
           IQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPF C APKQDP PLPYLAEK S NYDIS
Sbjct: 244 IQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFGCQAPKQDPPPLPYLAEKESVNYDIS 303

Query: 303 LEVQIKPTGQEDSTVVTRSNFKHLYWTLTQQLAHHTIN 340
           LEVQ+KP+G++DS V+T+SNF++LYWT+TQQLAHHT+N
Sbjct: 304 LEVQLKPSGRDDSCVITKSNFQNLYWTITQQLAHHTVN 341