Jatropha Genome Database
- JcCB0114361.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0114361.10 - phase: 0 /pseudo
(345 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS ... 134 7e-32
AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS ... 134 7e-32
AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS ... 134 7e-32
AT1G43140.1 | Symbols: | ubiquitin protein ligase binding | chr... 122 4e-28
AT1G02980.1 | Symbols: CUL2, ATCUL2 | CUL2 (CULLIN 2); ubiquitin... 120 1e-27
AT1G59790.1 | Symbols: | cullin-related | chr1:22001504-2200338... 112 4e-25
AT1G59800.1 | Symbols: | cullin-related | chr1:22004964-2200617... 96 3e-20
AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | ATCUL3 (AR... 50 2e-06
>AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS
THALIANA CULLIN 1); protein binding |
chr4:1129315-1133435 FORWARD
Length = 738
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 16/285 (5%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKS-KN 77
E+G + + + K I EG + F + Q M +Y +YN+CTQK +
Sbjct: 9 EQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLY-----------TTIYNMCTQKPPHD 57
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YS+++Y+KY EE+I V+P L KH +L E+ + WS K +F +LDR
Sbjct: 58 YSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDR 117
Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
+++ RR L + F LV + L+ ++++A+++L+ +ER+G+ IDR LLK V
Sbjct: 118 YFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIY 177
Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
G G YE+ FE ML + ++YYS W DS +Y+ K + CL +E R
Sbjct: 178 VEIGMGQMERYEEDFESFMLQDTSSYYSR-KASSWIQEDSCPDYMLKSEECLKKERERVA 236
Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDKVD 299
Y + +++ KL+ +++ LL A++ + + + + + DDKVD
Sbjct: 237 HYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVD 281
>AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS
THALIANA CULLIN 1); protein binding |
chr4:1129315-1133435 FORWARD
Length = 738
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 16/285 (5%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKS-KN 77
E+G + + + K I EG + F + Q M +Y +YN+CTQK +
Sbjct: 9 EQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLY-----------TTIYNMCTQKPPHD 57
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YS+++Y+KY EE+I V+P L KH +L E+ + WS K +F +LDR
Sbjct: 58 YSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDR 117
Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
+++ RR L + F LV + L+ ++++A+++L+ +ER+G+ IDR LLK V
Sbjct: 118 YFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIY 177
Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
G G YE+ FE ML + ++YYS W DS +Y+ K + CL +E R
Sbjct: 178 VEIGMGQMERYEEDFESFMLQDTSSYYSR-KASSWIQEDSCPDYMLKSEECLKKERERVA 236
Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDKVD 299
Y + +++ KL+ +++ LL A++ + + + + + DDKVD
Sbjct: 237 HYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVD 281
>AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS
THALIANA CULLIN 1); protein binding |
chr4:1129315-1133435 FORWARD
Length = 738
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 16/285 (5%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKS-KN 77
E+G + + + K I EG + F + Q M +Y +YN+CTQK +
Sbjct: 9 EQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLY-----------TTIYNMCTQKPPHD 57
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YS+++Y+KY EE+I V+P L KH +L E+ + WS K +F +LDR
Sbjct: 58 YSQQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDR 117
Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
+++ RR L + F LV + L+ ++++A+++L+ +ER+G+ IDR LLK V
Sbjct: 118 YFIARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIY 177
Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
G G YE+ FE ML + ++YYS W DS +Y+ K + CL +E R
Sbjct: 178 VEIGMGQMERYEEDFESFMLQDTSSYYSR-KASSWIQEDSCPDYMLKSEECLKKERERVA 236
Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDKVD 299
Y + +++ KL+ +++ LL A++ + + + + + DDKVD
Sbjct: 237 HYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVD 281
>AT1G43140.1 | Symbols: | ubiquitin protein ligase binding |
chr1:16232785-16236109 FORWARD
Length = 721
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKSKN- 77
EEG + + + + I E S PF Q + +Y +Y++C Q+ N
Sbjct: 18 EEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLY-----------TIIYDMCLQQPPND 66
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YS+E+Y KY ++ + + V+P + +HG +L E+ + W+ K +F +LDR
Sbjct: 67 YSQELYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDR 126
Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
+YV RR +L D F LV + + ++ +++LI +ER+G+ IDR L+K V
Sbjct: 127 FYVARRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVY 186
Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
G G YE+ FE +L + A+YYS + W DS +Y+ K + CL E R
Sbjct: 187 CGNGVGQMVIYEEDFESFLLQDTASYYSRKASRWS-QEDSCPDYMLKAEECLKLEKERVT 245
Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKAQ--GVTADDKV 298
Y + TT+ KL+ ++ LL A + +N+ + + DDK+
Sbjct: 246 NYLHSTTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKM 289
>AT1G02980.1 | Symbols: CUL2, ATCUL2 | CUL2 (CULLIN 2); ubiquitin
protein ligase binding | chr1:677869-681212 FORWARD
Length = 742
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 137/272 (50%), Gaps = 16/272 (5%)
Query: 32 KKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKSKN-YSEEIYEKYLNYL 90
+K++ E PF Q M++Y V+NLCTQK N YS++IY++Y
Sbjct: 23 QKILEEVPDEPPFDPVQRMQLY-----------TTVHNLCTQKPPNDYSQQIYDRYGGVY 71
Query: 91 EEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDRWYVPRREYTSLVD 150
++ V+P + KHG +L E+ + W+ K F E+LDR+Y R + +L
Sbjct: 72 VDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFYTRRGSHPTLSA 131
Query: 151 APRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFMGPEGKGA-TNYYE 209
F LV L + ++A+++LI +ER+G+ IDR LLK V G G Y E
Sbjct: 132 VGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCGNGMGELVKYEE 191
Query: 210 KFEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAEVYPYKTTKEKLLN 269
FE +L ++A+YYS + W +S +Y+ K + L E R Y + TT+ KL+
Sbjct: 192 DFESFLLEDSASYYSR-NASRWNQENSCPDYMIKAEESLRLEKERVTNYLHSTTEPKLVA 250
Query: 270 VIKYILLERNANRWAQNQKA--QGVTADDKVD 299
++ LL A + +N+ + + + DDK+D
Sbjct: 251 KVQNELLVVVAKQLIENEHSGCRALLRDDKMD 282
>AT1G59790.1 | Symbols: | cullin-related | chr1:22001504-22003385
FORWARD
Length = 374
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 18/284 (6%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKSKNY 78
EEG I + + I EG F ++ ++Y +Y++C Q+S +Y
Sbjct: 15 EEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLY-----------TIIYDMCVQRS-DY 62
Query: 79 SEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDRW 138
S+++YEKY +E++ + V+P L KH +L E+ + W+ K KF ++DR
Sbjct: 63 SQQLYEKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRH 122
Query: 139 YVPRREYT--SLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGF 196
V R + SL + F LV + +E +++LI +ER+G+ IDR L+K V
Sbjct: 123 LVRRSKIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDI 182
Query: 197 MGPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARA 255
G G YE+ FE ML + A+YYS + W DS +Y+ KV+ CL E R
Sbjct: 183 YVENGMGTLEKYEEDFESFMLQDTASYYSRKASRWT-EEDSCPDYMIKVEECLKMERERV 241
Query: 256 EVYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDK 297
Y + T+ KL+ I+ LL +N+ + + DDK
Sbjct: 242 THYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDK 285
>AT1G59800.1 | Symbols: | cullin-related | chr1:22004964-22006172
FORWARD
Length = 255
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 5/217 (2%)
Query: 55 YPSHIMPSISCCVYNLCTQKSKNYSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEV 114
+ IM + Y +C K+ +++Y+KY +E + + V+P L KH +L E+
Sbjct: 35 FNQEIMMMMHTATYRICAYKN---PQQLYDKYRELIENYAIQTVLPSLREKHDECMLREL 91
Query: 115 TESWSEFKAFADSSYKFVEFLDRWYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMS 174
+ W+ K + + +LD ++ ++ SL + F V + EAI++
Sbjct: 92 AKRWNAHKLLVRLFSRRLVYLDDSFLSKKGLPSLREVGLNCFRDQVYREMQSMAAEAILA 151
Query: 175 LIIQERKGKDIDRNLLKTVFGFMGPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFW 233
LI +ER+G+ IDR L++ V G G YE+ FE++ML + A+YYS + W
Sbjct: 152 LIHKEREGEQIDRELVRNVIDVFVENGMGTLKKYEEDFERLMLQDTASYYSSKASR-WIQ 210
Query: 234 RDSFTNYLQKVDWCLIQEGARAEVYPYKTTKEKLLNV 270
+S +Y K CL +E R Y + TT+ KL V
Sbjct: 211 EESCLDYTLKPQQCLQRERERVTHYLHPTTEPKLFEV 247
>AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | ATCUL3
(ARABIDOPSIS THALIANA CULLIN 3); protein binding /
ubiquitin-protein ligase | chr1:9296063-9298374 FORWARD
Length = 732
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 104/222 (46%), Gaps = 13/222 (5%)
Query: 68 YNLCTQKSKNYSEEIYEKYLNYLEEWIMDKVIPRLL-GKHGAALLTEVTESWSEFKAFAD 126
YN+ K + E++Y ++ + + +K +L+ G + L E+ + W+E +
Sbjct: 57 YNMVLHK---FGEKLYTGFIATMTSHLKEK--SKLIEAAQGGSFLEELNKKWNEHNKALE 111
Query: 127 SSYKFVEFLDRWYVPRREYTSLVDAPRRYF--CILVCDRLYGQIQEAIMSLIIQERKGKD 184
+ ++DR Y+ + T + + ++ +++ ++ ++ L+ +ER G+
Sbjct: 112 MIRDILMYMDRTYIESTKKTHVHPMGLNLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEV 171
Query: 185 IDRNLLKTVFG-FMGPEGKGATNYYEKFEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQK 243
IDR L++ V FM G + Y E FE+ L ++ +Y S E+ D +YL+K
Sbjct: 172 IDRGLMRNVIKMFMDL---GESVYQEDFEKPFLDASSEFYKVESQEFIESCDC-GDYLKK 227
Query: 244 VDWCLIQEGARAEVYPYKTTKEKLLNVIKYILLERNANRWAQ 285
+ L +E R Y ++EK+ +V++ ++ + R
Sbjct: 228 SEKRLTEEIERVAHYLDAKSEEKITSVVEKEMIANHMQRLVH 269