Jatropha Genome Database

JcCB0113601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0113601.10 + phase: 0 
         (269 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01290.1 | Symbols:  | ribose-5-phosphate isomerase | chr2:14...   353   5e-98
AT1G71100.1 | Symbols: RSW10 | RSW10 (RADIAL SWELLING 10); ribos...   348   1e-96
AT3G04790.1 | Symbols:  | ribose 5-phosphate isomerase-related |...   286   7e-78
AT5G44520.1 | Symbols:  | ribose 5-phosphate isomerase-related |...    97   7e-21

>AT2G01290.1 | Symbols:  | ribose-5-phosphate isomerase |
           chr2:149192-149989 REVERSE
          Length = 265

 Score =  353 bits (907), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 183/270 (67%), Positives = 215/270 (79%), Gaps = 7/270 (2%)

Query: 1   MAIPCQPLIGSEKLSMEAGPLSPMAPISQPPVILTQDELKKIAAYKAVDFVQSGMVLGLG 60
           MA+   PL  +   S+ A  ++   P    P+ LTQDELK+IAAYKAV+FV+SGMVLGLG
Sbjct: 1   MALAYDPLFITSDKSLSAFDVASSPP---QPMNLTQDELKRIAAYKAVEFVESGMVLGLG 57

Query: 61  TGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTHQQALSLGIPLSDLDSHPNVDLAIDGA 120
           TGSTAKHAVDRI +LL QGKL+NI+GIPTSKKT +QALSLGIPLSDLD+HP +DL+IDGA
Sbjct: 58  TGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVIDLSIDGA 117

Query: 121 DEVDSDLNLVKGRGGSLLREKMIESACKKFVVIVDESKLVPHIGANG-AMPVEVVPFCWK 179
           DEVD  LNLVKGRGGSLLREKMIE A KKFVVIVD+SK+V HIG +  A+PVE+VPFCWK
Sbjct: 118 DEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFCWK 177

Query: 180 FTQERLQEMFGYADCLAKLRRNGDSESGEPFVTDNGNYIVDLFFKKDIGDLKAASDAILR 239
           FT E+L+ +     C A LR     E G+ FVTDNGNYIVD+  ++D+GDL A SDAILR
Sbjct: 178 FTAEKLRSLLEGYGCEANLRLG---EKGKAFVTDNGNYIVDMHVEEDMGDLGAVSDAILR 234

Query: 240 LAGVVEHGMFLGMATTVIVAGEFGVTMKNK 269
           L GVVEHGMFL MA+TVI+AGE GV +KNK
Sbjct: 235 LPGVVEHGMFLDMASTVIIAGELGVKIKNK 264


>AT1G71100.1 | Symbols: RSW10 | RSW10 (RADIAL SWELLING 10);
           ribose-5-phosphate isomerase | chr1:26814726-26815529
           FORWARD
          Length = 267

 Score =  348 bits (894), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 177/246 (71%), Positives = 210/246 (85%), Gaps = 4/246 (1%)

Query: 28  SQPPVI-LTQDELKKIAAYKAVDFVQSGMVLGLGTGSTAKHAVDRIADLLHQGKLKNIIG 86
           S PP+  LTQ+ELKKIAAYKAV+FV+SGMV+GLGTGSTAKHAV RI++LL +GKLK+IIG
Sbjct: 20  SAPPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIG 79

Query: 87  IPTSKKTHQQALSLGIPLSDLDSHPNVDLAIDGADEVDSDLNLVKGRGGSLLREKMIESA 146
           IPTS  TH+QA+SLGIPLSDLDSHP VDL+IDGADEVD  LNLVKGRGGSLLREKMIE A
Sbjct: 80  IPTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGA 139

Query: 147 CKKFVVIVDESKLVPHIGANG-AMPVEVVPFCWKFTQERLQEMFGYADCLAKLRRN--GD 203
            KKFVVIVDESKLV +IG +G A+PVEVVPFC  FT+ +L+E+F  + C+AKLR     +
Sbjct: 140 SKKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSN 199

Query: 204 SESGEPFVTDNGNYIVDLFFKKDIGDLKAASDAILRLAGVVEHGMFLGMATTVIVAGEFG 263
            E   P VTDN NY+VDL+ ++DIGDL+ AS+AILR  GVVEHGMFLGMATT+IVAG+FG
Sbjct: 200 GEEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFG 259

Query: 264 VTMKNK 269
           VT+K++
Sbjct: 260 VTVKDR 265


>AT3G04790.1 | Symbols:  | ribose 5-phosphate isomerase-related |
           chr3:1313365-1314195 FORWARD
          Length = 276

 Score =  286 bits (733), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 144/239 (60%), Positives = 185/239 (77%), Gaps = 4/239 (1%)

Query: 32  VILTQDELKKIAAYKAVDFVQSGMVLGLGTGSTAKHAVDRIADLLHQGKLKNIIGIPTSK 91
           V L+QD+LKK+AA KAV+ ++ GMVLGLGTGSTA  AVD+I  LL  G+L +I+GIPTSK
Sbjct: 41  VALSQDDLKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSK 100

Query: 92  KTHQQALSLGIPLSDLDSHPNVDLAIDGADEVDSDLNLVKGRGGSLLREKMIESACKKFV 151
           +T +QA SLGIPL  LD+HP +DLAIDGADEVD +L+LVKGRGG+LLREKM+E+   KF+
Sbjct: 101 RTEEQARSLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFI 160

Query: 152 VIVDESKLVPHIGANG-AMPVEVVPFCWKFTQERLQEMFGYADCLAKLRRNGDSESGEPF 210
           V+ D++KLV  +G +G AMPVEVV FCW F   RLQ++F    C +KLR +GD   G+P+
Sbjct: 161 VVADDTKLVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLRVDGD---GKPY 217

Query: 211 VTDNGNYIVDLFFKKDIGDLKAASDAILRLAGVVEHGMFLGMATTVIVAGEFGVTMKNK 269
           VTDN NYI+DL+FK  + D  AA+  I +  GVVEHG+FLGMAT+VI+AG+ GV +  K
Sbjct: 218 VTDNSNYIIDLYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276


>AT5G44520.1 | Symbols:  | ribose 5-phosphate isomerase-related |
           chr5:17934610-17936441 REVERSE
          Length = 296

 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 13/230 (5%)

Query: 43  AAYKAVD-FVQSGMVLGLGTGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTHQQALSLG 101
           AA+  VD +V+SGM++GLG+G  +  A+  +   L  G L N++G+P S ++  +A   G
Sbjct: 43  AAHHTVDNYVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYG 102

Query: 102 IPLSDLDSHPNVDLAIDGADEVDSD-LNLVKGRGGS------LLREKMIESACKKFVVIV 154
           IPL        +D A   AD V+ + L  V GR  S      +L++K I     + V ++
Sbjct: 103 IPLEYYRDGVQIDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMI 162

Query: 155 DESKLVPHIGANGAMPVEVVPFCWKFTQERLQEMF-GYADCL--AKLRRNGDSESGEPFV 211
            E +     G  G++PV V    W    E + +++ G A+    A +   G      P V
Sbjct: 163 KEEQY--KAGLEGSIPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGDFPIV 220

Query: 212 TDNGNYIVDLFFKKDIGDLKAASDAILRLAGVVEHGMFLGMATTVIVAGE 261
           T +G+ I+D+ F   I  L   + ++ ++ GVV+HG+ +    TV++A E
Sbjct: 221 TSDGHNILDVIFTTPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIAEE 270