Jatropha Genome Database

JcCB0112391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0112391.10 + phase: 0 
         (308 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13930.1 | Symbols: CHS, TT4, ATCHS | TT4 (TRANSPARENT TESTA ...   377   e-105
AT4G00040.1 | Symbols:  | chalcone and stilbene synthase family ...   223   1e-58
AT4G34850.1 | Symbols:  | chalcone and stilbene synthase family ...   222   2e-58
AT1G02050.1 | Symbols:  | chalcone and stilbene synthase family ...   217   6e-57

>AT5G13930.1 | Symbols: CHS, TT4, ATCHS | TT4 (TRANSPARENT TESTA 4);
           naringenin-chalcone synthase | chr5:4488762-4490035
           FORWARD
          Length = 395

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/317 (56%), Positives = 232/317 (73%), Gaps = 19/317 (5%)

Query: 1   MEGVFEYRRATGPATILAIGTANPPNFIYQANYPDFYFEVTQSEHLKELKEKFKRIY--- 57
           ++ + + +RA GPA ILAIGTANP N + QA YPD+YF +T SEH+ +LKEKFKR+    
Sbjct: 9   LDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKS 68

Query: 58  ------------IIQKNPSIATYKAPSLDARQEILVHEVPKLGEEAATKAIQEWGQPISK 105
                        +++NP +  Y APSLD RQ+I+V EVPKLG+EAA KAI+EWGQP SK
Sbjct: 69  TIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSK 128

Query: 106 ITHLIFCTSSGVNMPGADLELVKLLGLQNSVQRFMMYQQGCFAGAAALRLAKDIAENNVD 165
           ITH++FCT+SGV+MPGAD +L KLLGL+ SV+R MMYQQGCFAG   LR+AKD+AENN  
Sbjct: 129 ITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRG 188

Query: 166 SRILIVCSENMTVSFHAPSNTHLDILVGSAIFGDGAAAIIVGSTPSTS--ERPLFHVFFA 223
           +R+L+VCSE   V+F  PS+THLD LVG A+F DGAAA+IVGS P TS  E+P+F +  A
Sbjct: 189 ARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSA 248

Query: 224 SQKLIPDSKNGIVGHTREMGLSYYLSRSVPQLIEDNIVQCLSEIFG--SNKDWNSIFYVV 281
           +Q ++PDS   I GH RE+GL+++L + VP LI  NIV+ L E F      DWNS+F++ 
Sbjct: 249 AQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIA 308

Query: 282 HPGGPTVLNGLERKLGL 298
           HPGGP +L+ +E KLGL
Sbjct: 309 HPGGPAILDQVEIKLGL 325


>AT4G00040.1 | Symbols:  | chalcone and stilbene synthase family
           protein | chr4:14653-15897 FORWARD
          Length = 385

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 177/306 (57%), Gaps = 20/306 (6%)

Query: 12  GPATILAIGTANPPNFIYQANYPDFYFEVTQSEHLKELKEKFKRIY-------------- 57
           G AT+LA+G A P N + Q N  + Y    + ++L  +K+K + +               
Sbjct: 17  GKATVLALGKALPSNVVSQENLVEEYLREIKCDNLS-IKDKLQHLCKSTTVKTRYTVMSR 75

Query: 58  -IIQKNPSIATYKAPSLDARQEILVHEVPKLGEEAATKAIQEWGQPISKITHLIFCTSSG 116
             + K P +AT  +P++  R EI    V ++  EA+   I+EWG+ +  ITHL++ +SS 
Sbjct: 76  ETLHKYPELATEGSPTIKQRLEIANDAVVQMAYEASLVCIKEWGRAVEDITHLVYVSSSE 135

Query: 117 VNMPGADLELVKLLGLQNSVQRFMMYQQGCFAGAAALRLAKDIAENNVDSRILIVCSENM 176
             +PG DL L   LGL N VQR M+Y  GC+ G + LR+AKDIAENN  SR+L+  SE  
Sbjct: 136 FRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDIAENNPGSRVLLTTSETT 195

Query: 177 TVSFHAPSNTHLDILVGSAIFGDGAAAIIVGSTPSTSERPLFHVFFASQKLIPDSKNGIV 236
            + F  P+      LVG+A+FGDGAAA+I+G+ P+ SE P   +  A Q+ +P ++  I 
Sbjct: 196 VLGFRPPNKARPYNLVGAALFGDGAAALIIGADPTESESPFMELHCAMQQFLPQTQGVID 255

Query: 237 GHTREMGLSYYLSRSVPQLIEDNIVQCLSEIF---GSNK-DWNSIFYVVHPGGPTVLNGL 292
           G   E G+++ L R +PQ IEDN+ +   ++    GS   + N +F+ VHPGGP +L+GL
Sbjct: 256 GRLSEEGITFKLGRDLPQKIEDNVEEFCKKLVAKAGSGALELNDLFWAVHPGGPAILSGL 315

Query: 293 ERKLGL 298
           E KL L
Sbjct: 316 ETKLKL 321


>AT4G34850.1 | Symbols:  | chalcone and stilbene synthase family
           protein | chr4:16608349-16609720 FORWARD
          Length = 392

 Score =  222 bits (566), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/314 (38%), Positives = 179/314 (57%), Gaps = 21/314 (6%)

Query: 6   EYRRATGPATILAIGTANPPNFIYQANYPDFYFEVTQSEHLKELKEKFKRIY-------- 57
           E +   G ATILA+G A P   + Q    D YF+ T+ +   ELK+K  R+         
Sbjct: 12  EKKSNPGKATILALGKAFPHQLVMQEYLVDGYFKTTKCDD-PELKQKLTRLCKTTTVKTR 70

Query: 58  -------IIQKNPSIATYKAPSLDARQEILVHEVPKLGEEAATKAIQEWGQPISKITHLI 110
                  I++K P +A     ++  R +I    V ++  EA+   I+ WG+ IS ITH++
Sbjct: 71  YVVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISDITHVV 130

Query: 111 FCTSSGVNMPGADLELVKLLGLQNSVQRFMMYQQGCFAGAAALRLAKDIAENNVDSRILI 170
           + +SS   +PG DL L K LGL     R ++Y  GC  G A LR+AKDIAENN  SR+L+
Sbjct: 131 YVSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLL 190

Query: 171 VCSENMTVSFHAPSNTHLDILVGSAIFGDGAAAIIVGSTPS-TSERPLFHVFFASQKLIP 229
             SE   + F  PS      LVG A+FGDGA A+I+GS P    E+PLF +  A Q  +P
Sbjct: 191 ATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPICEKPLFELHTAIQNFLP 250

Query: 230 DSKNGIVGHTREMGLSYYLSRSVPQLIEDNIVQCLSEIFG----SNKDWNSIFYVVHPGG 285
           +++  I G   E G+++ LSR +PQ+IEDN+     ++ G    ++K++N +F+ VHPGG
Sbjct: 251 ETEKTIDGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKNYNQMFWAVHPGG 310

Query: 286 PTVLNGLERKLGLT 299
           P +LN +E++L L+
Sbjct: 311 PAILNRIEKRLNLS 324


>AT1G02050.1 | Symbols:  | chalcone and stilbene synthase family
           protein | chr1:359164-360441 REVERSE
          Length = 395

 Score =  217 bits (553), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 112/298 (37%), Positives = 170/298 (57%), Gaps = 20/298 (6%)

Query: 12  GPATILAIGTANPPNFIYQANYPDFYFEVTQSEHLKELKEKFKRIY-------------- 57
           G AT+LA+G A P   + Q N  + +   T+ +    +KEK + +               
Sbjct: 24  GKATLLALGKAFPSQVVPQENLVEGFLRDTKCDD-AFIKEKLEHLCKTTTVKTRYTVLTR 82

Query: 58  -IIQKNPSIATYKAPSLDARQEILVHEVPKLGEEAATKAIQEWGQPISKITHLIFCTSSG 116
            I+ K P + T  +P++  R EI    V ++  EA+   I+EWG+P+  ITH+++ +SS 
Sbjct: 83  EILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLGCIKEWGRPVEDITHIVYVSSSE 142

Query: 117 VNMPGADLELVKLLGLQNSVQRFMMYQQGCFAGAAALRLAKDIAENNVDSRILIVCSENM 176
           + +PG DL L   LGL+N V R M+Y  GC+ G   LR+AKDIAENN  SR+L+  SE  
Sbjct: 143 IRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202

Query: 177 TVSFHAPSNTHLDILVGSAIFGDGAAAIIVGSTPSTSERPLFHVFFASQKLIPDSKNGIV 236
            + F  P+      LVG+A+FGDGAAA+I+G+ P   E P   + +A Q+ +P ++N I 
Sbjct: 203 ILGFRPPNKARPYDLVGAALFGDGAAAVIIGADPRECEAPFMELHYAVQQFLPGTQNVIE 262

Query: 237 GHTREMGLSYYLSRSVPQLIEDNIVQCLSEIFGSNKD----WNSIFYVVHPGGPTVLN 290
           G   E G+++ L R +PQ IE+NI +   ++ G   D    +N +F+ VHPGGP +LN
Sbjct: 263 GRLTEEGINFKLGRDLPQKIEENIEEFCKKLMGKAGDESMEFNDMFWAVHPGGPAILN 320