Jatropha Genome Database

JcCB0109541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0109541.10 + phase: 1 /partial
         (146 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51450.1 | Symbols:  | strictosidine synthase family protein ...   133   3e-32
AT3G51440.1 | Symbols:  | strictosidine synthase family protein ...   133   5e-32
AT3G51430.1 | Symbols: YLS2 | YLS2; strictosidine synthase | chr...   128   1e-30
AT3G51420.1 | Symbols: SSL4, ATSSL4 | SSL4 (STRICTOSIDINE SYNTHA...   122   1e-28
AT3G57010.1 | Symbols:  | strictosidine synthase family protein ...    54   3e-08
AT3G59530.2 | Symbols:  | strictosidine synthase family protein ...    53   8e-08
AT3G59530.1 | Symbols:  | strictosidine synthase family protein ...    53   8e-08
AT5G22020.1 | Symbols:  | strictosidine synthase family protein ...    52   9e-08
AT1G08470.1 | Symbols:  | strictosidine synthase family protein ...    49   1e-06
AT2G41300.1 | Symbols:  | strictosidine synthase | chr2:17214312...    47   5e-06
AT3G57020.1 | Symbols:  | strictosidine synthase family protein ...    47   6e-06
AT3G57020.2 | Symbols:  | strictosidine synthase family protein ...    47   6e-06

>AT3G51450.1 | Symbols:  | strictosidine synthase family protein |
           chr3:19091013-19092393 FORWARD
          Length = 371

 Score =  133 bits (335), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 5/133 (3%)

Query: 11  RRCRKYYIKGNKKGSLEKFTD-LPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVR 69
           +RC KYYI   +   +E FT  LPG PDNI YDG GH+WIALP  +TT W    KYPF+R
Sbjct: 238 KRCSKYYISEER---VEVFTQSLPGYPDNIRYDGDGHYWIALPSGVTTLWNISLKYPFLR 294

Query: 70  KLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGNHLYCGSITY 129
           KL  +V K+  ++    +N GV  VDL+G  I++Y+DP+L  I++  KIG +LYCGS++ 
Sbjct: 295 KLTAMVAKYGVDLM-FMENAGVLQVDLDGNPIAYYHDPKLSHIATCDKIGKYLYCGSLSQ 353

Query: 130 PYIIRLNLAKYPA 142
            +I+RL+L KYPA
Sbjct: 354 SHILRLDLLKYPA 366


>AT3G51440.1 | Symbols:  | strictosidine synthase family protein |
           chr3:19089114-19090537 FORWARD
          Length = 371

 Score =  133 bits (334), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/133 (51%), Positives = 90/133 (67%), Gaps = 5/133 (3%)

Query: 11  RRCRKYYIKGNKKGSLEKFTD-LPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVR 69
           RRC KYYI G   G +E F   LPG PDNI YDG GH+WIA+P  +TT WK   KYPF+R
Sbjct: 238 RRCSKYYING---GRVELFIQGLPGYPDNIRYDGDGHYWIAMPSGVTTLWKLSMKYPFLR 294

Query: 70  KLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGNHLYCGSITY 129
           K+  +  K+ G      +N GV  VDL+G  I++Y+D  L  I++ VKIGN+LYCGS+ +
Sbjct: 295 KITAMAAKY-GYEPMFMENAGVLQVDLDGNPIAYYHDQALSHITTGVKIGNYLYCGSLWH 353

Query: 130 PYIIRLNLAKYPA 142
            +I+RL+L KYPA
Sbjct: 354 SHILRLDLLKYPA 366


>AT3G51430.1 | Symbols: YLS2 | YLS2; strictosidine synthase |
           chr3:19086548-19087909 FORWARD
          Length = 371

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/133 (49%), Positives = 87/133 (65%), Gaps = 5/133 (3%)

Query: 11  RRCRKYYIKGNKKGSLEKFTD-LPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVR 69
           RRC KYYI   +   +E F   LPG PDNI YDG GH+WIA+    +T W+   KYPF+R
Sbjct: 238 RRCSKYYINEER---VEVFIQGLPGYPDNIRYDGDGHYWIAMVSGASTLWRLSMKYPFLR 294

Query: 70  KLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGNHLYCGSITY 129
           K+  I  K+   +    KN GV  VDL+G  I++Y+D  L  I++ +KIGN+LYCG+I +
Sbjct: 295 KITAIAAKYGVELMFM-KNAGVLQVDLDGNPIAYYHDQRLSHITTGIKIGNYLYCGNILH 353

Query: 130 PYIIRLNLAKYPA 142
            YIIRL+L KYPA
Sbjct: 354 SYIIRLDLLKYPA 366


>AT3G51420.1 | Symbols: SSL4, ATSSL4 | SSL4 (STRICTOSIDINE
           SYNTHASE-LIKE 4); strictosidine synthase |
           chr3:19084082-19085451 FORWARD
          Length = 370

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 83/133 (62%), Gaps = 5/133 (3%)

Query: 11  RRCRKYYIKGNKKGSLEKFTD-LPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVR 69
           RRC KYYI   +   +E F   LPG PDNI YDG GH+WIAL  E+TT WK   KY F+R
Sbjct: 238 RRCSKYYISEER---VEVFIQGLPGYPDNIRYDGDGHYWIALISEVTTSWKLSMKYLFLR 294

Query: 70  KLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGNHLYCGSITY 129
           KL  +  K+   +    KN  V  VDL+G  I+ Y+D     I+S VKIGNHLY GS+ +
Sbjct: 295 KLIYMAAKYGVELLSI-KNAAVLQVDLDGNPIAMYHDHPFSHITSGVKIGNHLYFGSLLH 353

Query: 130 PYIIRLNLAKYPA 142
            YI RL+L KYPA
Sbjct: 354 SYITRLDLLKYPA 366


>AT3G57010.1 | Symbols:  | strictosidine synthase family protein |
           chr3:21095854-21097316 REVERSE
          Length = 376

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 10/140 (7%)

Query: 13  CRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLA 72
           C + ++KG K G+ E F  LPG PDNI     G FW+AL  +   F +AV  + +V +  
Sbjct: 238 CHRIWVKGPKSGTNEVFATLPGSPDNIRRTPTGDFWVALHCKKNLFTRAVLIHTWVGRFF 297

Query: 73  GIVLKHKGNI--GDTGKNGGVFVVDLE---GKLISHYYDPE---LKLISSSVKIGN-HLY 123
              +K +  I   + GK  G+ VV L    G+++    D E   +K +S + +  +  L+
Sbjct: 298 MNTMKMETVIHFMNGGKPHGI-VVKLSGETGEILEILEDSEGKTVKYVSEAYETKDGKLW 356

Query: 124 CGSITYPYIIRLNLAKYPAL 143
            GS+ +P +  L+ + Y ++
Sbjct: 357 IGSVYWPAVWVLDTSVYDSI 376


>AT3G59530.2 | Symbols:  | strictosidine synthase family protein |
           chr3:21993710-21995164 FORWARD
          Length = 403

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 5/135 (3%)

Query: 4   FGLVHYRRRCR--KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKA 61
           F L      CR  KY+++G K G +E   DLPG PDN+  +  G FW+A+    T   + 
Sbjct: 267 FLLFTETTNCRLVKYWLEGPKMGEVEVVADLPGFPDNVRINEEGQFWVAIDCCRTPAQEV 326

Query: 62  VFKYPFVRKL---AGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKI 118
           +   P++R +     I +K             +   D EGK++    D + K++   +  
Sbjct: 327 LTNNPWIRSIYFRLPIPMKLLAKTMGMRMYTVISRFDEEGKVLEVLEDRQGKVMKLWIGT 386

Query: 119 GNHLYCGSITYPYII 133
             H +  ++ YP  +
Sbjct: 387 VAHNHIATLPYPLTM 401


>AT3G59530.1 | Symbols:  | strictosidine synthase family protein |
           chr3:21993710-21995164 FORWARD
          Length = 403

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 5/135 (3%)

Query: 4   FGLVHYRRRCR--KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKA 61
           F L      CR  KY+++G K G +E   DLPG PDN+  +  G FW+A+    T   + 
Sbjct: 267 FLLFTETTNCRLVKYWLEGPKMGEVEVVADLPGFPDNVRINEEGQFWVAIDCCRTPAQEV 326

Query: 62  VFKYPFVRKL---AGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKI 118
           +   P++R +     I +K             +   D EGK++    D + K++   +  
Sbjct: 327 LTNNPWIRSIYFRLPIPMKLLAKTMGMRMYTVISRFDEEGKVLEVLEDRQGKVMKLWIGT 386

Query: 119 GNHLYCGSITYPYII 133
             H +  ++ YP  +
Sbjct: 387 VAHNHIATLPYPLTM 401


>AT5G22020.1 | Symbols:  | strictosidine synthase family protein |
           chr5:7287878-7289357 REVERSE
          Length = 395

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 7/131 (5%)

Query: 14  RKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYP----FVR 69
           R+Y++KG K G+ + F  LPG PDN+  +  G FW+AL      +   + +YP    F+ 
Sbjct: 265 RRYWLKGEKAGTTDVFAYLPGHPDNVRTNQKGEFWVALHCRRNYYSYLMARYPKLRMFIL 324

Query: 70  KLAGIVLKHKGNIGDTGKNGGVFVVDLEGKLISHYYDPELKLISSSVKIGN---HLYCGS 126
           +L      H         +G V     EGKL+    D E K++ S  ++      L+ GS
Sbjct: 325 RLPITARTHYSFQIGLRPHGLVVKYSPEGKLMHVLEDSEGKVVRSVSEVEEKDGKLWMGS 384

Query: 127 ITYPYIIRLNL 137
           +   ++   +L
Sbjct: 385 VLMNFVAVYDL 395


>AT1G08470.1 | Symbols:  | strictosidine synthase family protein |
           chr1:2682262-2683977 REVERSE
          Length = 390

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 32/60 (53%)

Query: 12  RCRKYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKL 71
           R RKY++KG K G+ E    L G PDNI  +  G FW+A+      F   +  YP VRK 
Sbjct: 257 RLRKYWLKGEKAGTSEVVALLHGFPDNIRTNKDGDFWVAVHCHRNIFTHLMAHYPRVRKF 316


>AT2G41300.1 | Symbols:  | strictosidine synthase |
           chr2:17214312-17216292 REVERSE
          Length = 394

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 23/137 (16%)

Query: 15  KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGI 74
           +Y+ KG   G+ + F  LPG  DNI     G FW+AL  + T F +    +P+V K    
Sbjct: 264 RYWAKGPNAGTRDIFAKLPGYADNIRRTETGDFWVALHSKKTPFSRLSMIHPWVGKFFIK 323

Query: 75  VLK-------------HKGNIGDTGKNGGVFVV--DLEGKLISHYYDPELKLISSSVKIG 119
            LK             H   +  +GK G +  +  D EGK         +K IS   +  
Sbjct: 324 TLKMELLVFLFEGGKPHAVAVKLSGKTGEIMEILEDSEGK--------NMKFISEVQERD 375

Query: 120 NHLYCGSITYPYIIRLN 136
             L+ GS+  P +  L+
Sbjct: 376 GRLWFGSVFLPSVWVLD 392


>AT3G57020.1 | Symbols:  | strictosidine synthase family protein |
           chr3:21098515-21100303 REVERSE
          Length = 370

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 24/138 (17%)

Query: 15  KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGI 74
           +Y+IKG K G+ + F  +PG PDNI     G FWI L  +     + + KY ++ KL   
Sbjct: 239 RYWIKGPKAGTRDIFAKVPGYPDNIRLTSTGDFWIGLHCKKNLIGRLIVKYKWLGKLVEK 298

Query: 75  VLK-------------HKGNIGDTGKNGGV--FVVDLEGKLISHYYDPELKLISSSVKIG 119
            +K             H   +  +G+ G V   + D EGK         +K +S + +  
Sbjct: 299 TMKLEYVIAFINGFKPHGVAVKISGETGEVLELLEDKEGKT--------MKYVSEAYERD 350

Query: 120 N-HLYCGSITYPYIIRLN 136
           +  L+ GS+ +P +  L+
Sbjct: 351 DGKLWFGSVYWPAVWVLD 368


>AT3G57020.2 | Symbols:  | strictosidine synthase family protein |
           chr3:21098515-21100303 REVERSE
          Length = 356

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 24/138 (17%)

Query: 15  KYYIKGNKKGSLEKFTDLPGMPDNIHYDGHGHFWIALPMEITTFWKAVFKYPFVRKLAGI 74
           +Y+IKG K G+ + F  +PG PDNI     G FWI L  +     + + KY ++ KL   
Sbjct: 225 RYWIKGPKAGTRDIFAKVPGYPDNIRLTSTGDFWIGLHCKKNLIGRLIVKYKWLGKLVEK 284

Query: 75  VLK-------------HKGNIGDTGKNGGV--FVVDLEGKLISHYYDPELKLISSSVKIG 119
            +K             H   +  +G+ G V   + D EGK         +K +S + +  
Sbjct: 285 TMKLEYVIAFINGFKPHGVAVKISGETGEVLELLEDKEGKT--------MKYVSEAYERD 336

Query: 120 N-HLYCGSITYPYIIRLN 136
           +  L+ GS+ +P +  L+
Sbjct: 337 DGKLWFGSVYWPAVWVLD 354