Jatropha Genome Database
- JcCB0106211.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0106211.10 + phase: 0 /partial
(221 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 373 e-104
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 373 e-104
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 8e-24
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 3e-23
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 3e-23
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 5e-23
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 6e-23
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 1e-22
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 102 2e-22
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 101 4e-22
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 98 5e-21
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 98 5e-21
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 6e-21
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 97 9e-21
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 97 9e-21
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 97 1e-20
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 96 2e-20
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 2e-20
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 2e-20
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 2e-20
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 96 2e-20
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 3e-20
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 4e-20
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-20
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-20
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-20
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 94 7e-20
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 8e-20
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 94 9e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 1e-19
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 1e-19
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 2e-19
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 2e-19
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 92 3e-19
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 6e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 9e-19
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 1e-18
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-18
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-18
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-18
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 89 2e-18
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-18
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 4e-18
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 4e-18
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 6e-18
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 6e-18
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 8e-18
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-17
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-17
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 3e-17
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 4e-17
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 84 6e-17
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 6e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 8e-17
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 84 8e-17
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 84 8e-17
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 8e-17
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 1e-16
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 1e-16
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 1e-16
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 83 1e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-16
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 3e-16
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 82 3e-16
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 82 3e-16
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 3e-16
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 3e-16
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 3e-16
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 4e-16
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 5e-16
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 7e-16
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 8e-16
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 8e-16
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 9e-16
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 80 1e-15
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 79 2e-15
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 79 3e-15
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 4e-15
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 4e-15
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 4e-15
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 5e-15
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 78 5e-15
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 77 8e-15
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 77 1e-14
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 76 2e-14
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-14
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-14
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 3e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 3e-14
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 75 3e-14
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 75 3e-14
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 75 3e-14
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 3e-14
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 75 4e-14
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 4e-14
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 6e-14
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 6e-14
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 7e-14
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 7e-14
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 1e-13
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 73 1e-13
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 1e-13
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 1e-13
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 73 2e-13
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 3e-13
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 3e-13
AT1G01970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 5e-13
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 71 6e-13
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 8e-13
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 9e-13
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 1e-12
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 70 1e-12
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-12
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-12
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-12
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-12
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-12
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 68 3e-12
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 4e-12
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 4e-12
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 6e-12
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 6e-12
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 68 6e-12
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 67 6e-12
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 67 7e-12
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 7e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 7e-12
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 8e-12
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 8e-12
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 2e-11
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-11
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 3e-11
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 3e-11
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 3e-11
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 65 3e-11
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 4e-11
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 4e-11
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 64 5e-11
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 64 6e-11
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 64 6e-11
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 6e-11
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 6e-11
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 8e-11
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 9e-11
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 63 1e-10
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 1e-10
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 63 2e-10
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 63 2e-10
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-10
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 62 2e-10
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 62 2e-10
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 3e-10
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 4e-10
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 4e-10
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 4e-10
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 5e-10
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 5e-10
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 5e-10
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 5e-10
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 60 8e-10
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 8e-10
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 60 1e-09
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-09
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-09
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 4e-09
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 4e-09
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 4e-09
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 4e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 58 5e-09
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 5e-09
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 5e-09
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 5e-09
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 5e-09
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 5e-09
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 5e-09
AT2G30780.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 6e-09
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-09
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-09
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 8e-09
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 9e-09
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 56 2e-08
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-08
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-08
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 3e-08
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 3e-08
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 3e-08
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 3e-08
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 3e-08
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 3e-08
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 3e-08
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT4G14190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 4e-08
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 4e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 6e-08
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 6e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 7e-08
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 8e-08
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 9e-08
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 9e-08
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 1e-07
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 2e-07
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 2e-07
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 53 2e-07
AT1G60770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 4e-07
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 5e-07
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 5e-07
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 5e-07
AT4G21705.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 5e-07
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 5e-07
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 6e-07
AT1G02370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 6e-07
AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279)... 51 6e-07
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 6e-07
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 6e-07
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 7e-07
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 7e-07
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 8e-07
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 9e-07
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 2e-06
AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |... 49 2e-06
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 49 2e-06
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT1G03100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 4e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 4e-06
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 48 4e-06
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 4e-06
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 5e-06
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 5e-06
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 48 5e-06
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 48 6e-06
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 7e-06
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 8e-06
AT1G07590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 9e-06
AT5G36300.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 47 9e-06
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 202/221 (91%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
ILEWLR Q+WW+FSE+D + LITA+GK GNFN AE++L+ ++KMG PNV+S+TALME+Y
Sbjct: 132 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESY 191
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
GRGG+ NNAEAIFRRMQ+ GPEPSA+TYQIILKTFVEG+KFKEAEEVFE LL ++++PLK
Sbjct: 192 GRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLK 251
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQ 180
PDQKM+HMMIYMY+KAGNYEKARK+FS M + +P STVTYNSLMSFET+YKEVSKIYDQ
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQ 311
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
MQRS +QPDVVSYALLI AYG+ARREEEAL+VFEEMLDAGV
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 30 NFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
++ E KI M + P+VVS+ L++AYGR R A ++F M G P+ Y
Sbjct: 301 SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
I+L F ++A+ VF+ + D + PD + M+ Y A + E A K F +
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSMRRDR---IFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 417
Query: 150 TQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARRE 206
+ VTY +L+ +V K +Y++M+ SG++ + +++A G+ +
Sbjct: 418 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNF 477
Query: 207 EEALAVFEEMLDAGV 221
AL ++EM GV
Sbjct: 478 GSALGWYKEMESCGV 492
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A G +A+ + M + P++ S+T ++ AY AE F+R++ G
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+ +TY ++K + + N ++ EV+E + + +K +Q + ++ + N+
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKM---RLSGIKANQTILTTIMDASGRCKNFG 478
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV 174
A + M +P N L+S + E+
Sbjct: 479 SALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 512
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 373 bits (957), Expect = e-104, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 202/221 (91%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
ILEWLR Q+WW+FSE+D + LITA+GK GNFN AE++L+ ++KMG PNV+S+TALME+Y
Sbjct: 125 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESY 184
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
GRGG+ NNAEAIFRRMQ+ GPEPSA+TYQIILKTFVEG+KFKEAEEVFE LL ++++PLK
Sbjct: 185 GRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLK 244
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQ 180
PDQKM+HMMIYMY+KAGNYEKARK+FS M + +P STVTYNSLMSFET+YKEVSKIYDQ
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQ 304
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
MQRS +QPDVVSYALLI AYG+ARREEEAL+VFEEMLDAGV
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 30 NFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
++ E KI M + P+VVS+ L++AYGR R A ++F M G P+ Y
Sbjct: 294 SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 353
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
I+L F ++A+ VF+ + D + PD + M+ Y A + E A K F +
Sbjct: 354 ILLDAFAISGMVEQAKTVFKSMRRDR---IFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 410
Query: 150 TQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARRE 206
+ VTY +L+ +V K +Y++M+ SG++ + +++A G+ +
Sbjct: 411 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNF 470
Query: 207 EEALAVFEEMLDAGV 221
AL ++EM GV
Sbjct: 471 GSALGWYKEMESCGV 485
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A G +A+ + M + P++ S+T ++ AY AE F+R++ G
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+ +TY ++K + + N ++ EV+E + + +K +Q + ++ + N+
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKM---RLSGIKANQTILTTIMDASGRCKNFG 471
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV 174
A + M +P N L+S + E+
Sbjct: 472 SALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 505
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ +GK EA K+L M G++P++V++ +L+ AY R G + A + +M G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P TY +L F K + A +FE + A KP+ F+ I MY G +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEM---RNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS-FETNY--KEVSKIYDQMQRSGLQPDVVSYALLI 197
+ K+F + + VT+N+L++ F N EVS ++ +M+R+G P+ ++ LI
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+AY + E+A+ V+ MLDAGV
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGV 520
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+ GK+G + A + + + G++ +V S+T+L+ A+ GRY A +F++M+ G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 81 PEPSALTYQIILKTFVE-GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+P+ +TY +IL F + G + + + E + SD A PD ++ +I ++ +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA---PDAYTYNTLITCCKRGSLH 295
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
++A ++F M + VTYN+L+ KE K+ ++M +G P +V+Y L
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I+AY + +EA+ + +M + G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGT 380
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 35/236 (14%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+A+ + G+F +A + M G P++ ++ ++ A RGG + +E + M+
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 81 PEPSALTYQIILKTFVEGNKF----KEAEEVFEPLLSDERAPLK---------------- 120
+P+ LTY +L + G + AEEV+ ++ LK
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 121 ------------PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM--- 165
PD + M+ +Y + KA + M +R S TYNSLM
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 166 SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
S ++ + +I ++ G++PD++SY +I AY + R +A +F EM ++G+
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+A+ + G +EA ++ M + G P+V ++T L+ + R G+ +A +IF M+ G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ T+ +K + KF E ++F+ + L PD ++ ++ ++ + G
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEI---NVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ +F M + T+N+L+S + ++++ +Y +M +G+ PD+ +Y ++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 198 NAYGKARREEEALAVFEEMLDA 219
A + E++ V EM D
Sbjct: 532 AALARGGMWEQSEKVLAEMEDG 553
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ H + +F ++E+IL + G P+++S+ ++ AY R R +A IF M+ G
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY + ++ + F+EA V ++ + +P+Q ++ ++ Y K +
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMI---KHGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 141 KARKMFSLMTQREIPHS 157
+A K+F + PH+
Sbjct: 787 EA-KLFVEDLRNLDPHA 802
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PE ++ LK KF A F+ + + D + ++I M K G
Sbjct: 131 PESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVS 190
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
A MF+ + + +Y SL+S N Y+E ++ +M+ G +P +++Y +++
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 198 NAYGK 202
N +GK
Sbjct: 251 NVFGK 255
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 4 WLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG 63
WL+ Q + ++ G+ F K+L M + G PN V++ L+ +YGR
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
N A +F +MQ G +P +TY ++ + A ++++ + + L PD
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM---QAGGLSPDT 469
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQ 180
+ ++I KAG+ A K+F M + + VTYN +M NY+ K+Y
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
MQ +G +PD V+Y++++ G EEA AVF EM
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I GK G+ A K+ M G PN+V++ +M+ + + Y NA ++R MQ G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP +TY I+++ +EAE VF + ++ PD+ ++ +++ ++ KAGN E
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM---QQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRS---GLQPDVVSYALLI 197
KA + + M + + T NSL+S ++++ Y+ +Q GL+P + +Y LL+
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 198 NAYGKAR 204
+ R
Sbjct: 652 SCCTDGR 658
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
RLI ++G+ NEA + M + G P+ V++ L++ + + G + A +++RMQ
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P TY +I+ + A ++F ++ P+ +++M+ ++ KA NY
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG---CTPNLVTYNIMMDLHAKARNY 520
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSF--ETNY-KEVSKIYDQMQRSGLQPDVVSYALL 196
+ A K++ M VTY+ +M Y +E ++ +MQ+ PD Y LL
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
++ +GKA E+A ++ ML AG+
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 148 LMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
L Q H TY ++ + + ++K+ D+M R G QP+ V+Y LI++YG+A
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 205 REEEALAVFEEMLDAGV 221
EA+ VF +M +AG
Sbjct: 414 YLNEAMNVFNQMQEAGC 430
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 4 WLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG 63
WL+ Q + ++ G+ F K+L M + G PN V++ L+ +YGR
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRA 412
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
N A +F +MQ G +P +TY ++ + A ++++ + + L PD
Sbjct: 413 NYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM---QAGGLSPDT 469
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQ 180
+ ++I KAG+ A K+F M + + VTYN +M NY+ K+Y
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
MQ +G +PD V+Y++++ G EEA AVF EM
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I GK G+ A K+ M G PN+V++ +M+ + + Y NA ++R MQ G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP +TY I+++ +EAE VF + ++ PD+ ++ +++ ++ KAGN E
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM---QQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRS---GLQPDVVSYALLI 197
KA + + M + + T NSL+S ++++ Y+ +Q GL+P + +Y LL+
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Query: 198 NAYGKAR 204
+ R
Sbjct: 652 SCCTDGR 658
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
RLI ++G+ NEA + M + G P+ V++ L++ + + G + A +++RMQ
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P TY +I+ + A ++F ++ P+ +++M+ ++ KA NY
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG---CTPNLVTYNIMMDLHAKARNY 520
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSF--ETNY-KEVSKIYDQMQRSGLQPDVVSYALL 196
+ A K++ M VTY+ +M Y +E ++ +MQ+ PD Y LL
Sbjct: 521 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
++ +GKA E+A ++ ML AG+
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 148 LMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
L Q H TY ++ + + ++K+ D+M R G QP+ V+Y LI++YG+A
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 205 REEEALAVFEEMLDAGV 221
EA+ VF +M +AG
Sbjct: 414 YLNEAMNVFNQMQEAGC 430
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+ G+ G A++I GY V + +AL+ AYGR G + A ++F M+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 81 PEPSALTYQIILKTFVEGN-KFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P+ +TY ++ +G +FK+ + F+ + +R ++PD+ F+ ++ + + G +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM---QRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALL 196
E AR +F MT R I +YN+L+ ++ +I QM + P+VVSY+ +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I+ + KA R +EAL +F EM G+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGI 440
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K G + A +IL M PNVVS++ +++ + + GR++ A +F M+ LG
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
++Y +L + + + +EA ++ + S +K D ++ ++ Y K G Y+
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMAS---VGIKKDVVTYNALLGGYGKQGKYD 496
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ +K+F+ M + + + +TY++L+ + YKE +I+ + + +GL+ DVV Y+ LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+A K A+++ +EM G+
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGI 580
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K G F+EA + M +G A + VS+ L+ Y + GR A I R M ++G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY +L + + K+ E ++VF + +R + P+ + +I Y K G Y+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEM---KREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+A ++F + V Y++L+ V + D+M + G+ P+VV+Y +I
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 198 NAYGKA 203
+A+G++
Sbjct: 592 DAFGRS 597
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ +GKQG ++E +K+ T M + PN+++++ L++ Y +GG Y A IFR ++ G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYM-------- 132
+ Y ++ + A + + + + + P+ ++ +I
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEM---TKEGISPNVVTYNSIIDAFGRSATMD 601
Query: 133 ----YRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS---------FETNYKEVS---K 176
Y G+ + S +T+ E + L + E +E+S +
Sbjct: 602 RSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILE 661
Query: 177 IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
++ +M + ++P+VV+++ ++NA + E+A + EE+
Sbjct: 662 VFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 4 WLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG 63
WL+ Q + ++ G+ F E K+L M + G PN V++ L+ +YGR
Sbjct: 348 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRA 407
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
A +F +MQ G EP +TY ++ + A ++++ + + A L PD
Sbjct: 408 NYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM---QEAGLSPDT 464
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQ 180
+ ++I KAG+ A ++F M + + VT+N +++ NY+ K+Y
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
MQ +G QPD V+Y++++ G EEA VF EM
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
RLI ++G+ EA + M + G P+ V++ L++ + + G + A +++RMQ
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P TY +I+ + A +F ++ P+ F++MI ++ KA NY
Sbjct: 459 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG---CTPNLVTFNIMIALHAKARNY 515
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALL 196
E A K++ M VTY+ +M + +E ++ +MQR PD Y LL
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
++ +GKA ++A ++ ML AG+
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGL 600
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I GK G+ A ++ M G PN+V+ ++ + + Y A ++R MQ G
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +TY I+++ +EAE VF + +R PD+ ++ +++ ++ KAGN +
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM---QRKNWVPDEPVYGLLVDLWGKAGNVD 586
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRS---GLQPDVVSYALLI 197
KA + + M Q + + T NSL+S +S+ Y+ +Q GL P + +Y LL+
Sbjct: 587 KAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Query: 198 NAYGKAR 204
+ AR
Sbjct: 647 SCCTDAR 653
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++ +F E ++ + ++ D KP+ ++ +I+ Y +A ++A +F
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDG---CKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 147 SLMTQREIPHSTVTYNSLMSF--ETNYKEVS-KIYDQMQRSGLQPDVVSYALLINAYGKA 203
+ M + VTY +L+ + + +++ +Y +MQ +GL PD +Y+++IN GKA
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 204 RREEEALAVFEEMLDAGV 221
A +F EM+ G
Sbjct: 478 GHLPAAHRLFCEMVGQGC 495
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 115 ERAP-LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF--ETNY 171
+R P K D + M+ +A + + K+ M + +TVTYN L+ NY
Sbjct: 350 KRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANY 409
Query: 172 -KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
KE +++QMQ +G +PD V+Y LI+ + KA + A+ +++ M +AG+
Sbjct: 410 LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 132 MYRKAGNYEKARKMFS-LMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQ 187
+ ++ NY A F L Q H TY ++ + + E++K+ D+M R G +
Sbjct: 332 VLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCK 391
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
P+ V+Y LI++YG+A +EA+ VF +M +AG
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGC 425
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 42/235 (17%)
Query: 26 GKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSA 85
G++ ++ A K+L + Y +V ++T ++ AY R G+Y A +F RM+ +GP P+
Sbjct: 186 GRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL 245
Query: 86 LTYQIILKTF------------------VEGNKF------------------KEAEEVFE 109
+TY +IL F +G KF +EA+E F
Sbjct: 246 VTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 110 PLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET 169
L S +P ++ ++ ++ KAG Y +A + M + P +VTYN L++
Sbjct: 306 ELKS---CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
Query: 170 N---YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
KE + + + M + G+ P+ ++Y +I+AYGKA +E+EAL +F M +AG
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 102/193 (52%), Gaps = 6/193 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ K +E+ T K GY P++V +++ + R Y+ AE I ++ G
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ +V + +AEE+ + L E++ LKPD ++ +I + + G +
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTL---EKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +M S MT+R I TYN+ +S T + E+ + + M ++ +P+ +++ +++
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Query: 198 NAYGKARREEEAL 210
+ Y +A + EA+
Sbjct: 779 DGYCRAGKYSEAM 791
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 42/258 (16%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+L+ +R++ F E +++A ++G EA++ + GY P V++ AL++ +
Sbjct: 268 VLDEMRSKGL-KFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
G+ G Y A ++ + M+ ++TY ++ +V KEA V E + + +
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM---TKKGVM 383
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF------------- 167
P+ + +I Y KAG ++A K+F M + +T TYN+++S
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 168 ----ETNY---------------------KEVSKIYDQMQRSGLQPDVVSYALLINAYGK 202
++N K V++++ +M+ G +PD ++ LI+AYG+
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 203 ARREEEALAVFEEMLDAG 220
E +A ++ EM AG
Sbjct: 504 CGSEVDASKMYGEMTRAG 521
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 37/237 (15%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+A+G+ G+ +A K+ M + G+ V ++ AL+ A R G + + E + M++ G
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 81 PEPSALTYQIILKTFVEG----------NKFKEAEEVF----------------EPLLSD 114
+P+ +Y ++L+ + +G N+ KE + +F L
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ-IFPSWMLLRTLLLANFKCRALAGS 615
Query: 115 ERA-------PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 167
ERA KPD +F+ M+ ++ + Y++A + + + + VTYNSLM
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 168 ETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
E K I +++S L+PD+VSY +I + + +EA+ + EM + G+
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 46/237 (19%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ G +G ++ M G+ P+ + L+ AYGR G +A ++ M G
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP-LKPDQKMFHMMIYMYRKAGNY 139
TY +L ++ E V +SD ++ KP + + +M+ Y K GNY
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENV----ISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 140 E-----------------------------KARKM------FSLMTQREIPHSTVTYNSL 164
K R + F+L + V +NS+
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 165 MSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLINAY---GKARREEEALAVFEE 215
+S T Y + I + ++ GL PD+V+Y L++ Y G+ + EE L E+
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 105/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ K G+ EA + M G PN +++ L+ +G+ GRY++ +F M++
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P A TY I+++ F EG FKE +F ++ + ++PD + + +I+ K G +E
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN---IEPDMETYEGIIFACGKGGLHE 439
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
ARK+ MT +I S+ Y ++ Y+E ++ M G P + ++ L+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
++ + +E+ A+ ++D+G+
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGI 523
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A GK G +A KIL YM P+ ++T ++EA+G+ Y A F M +G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS T+ +L +F G KE+E + L+ D P D F+ I Y++ G +E
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLV-DSGIPRNRDT--FNAQIEAYKQGGKFE 544
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K + M + T +++S F E + +++M+ S + P ++ Y +++
Sbjct: 545 EAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMML 604
Query: 198 NAYGKARREEEALAVFEEML 217
YGK R ++ + EEML
Sbjct: 605 AVYGKTERWDDVNELLEEML 624
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+ ++++ Q W +E +I+ G++G ++ ++ M G + +V S+TAL+ AY
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
GR GRY + + RM+ PS LTY ++ G + E + ++
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG--LDWEGLLGLFAEMRHEGIQ 244
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD- 179
PD ++ ++ G ++A +F M I TY+ L+ + + K+ D
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 180 --QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+M G PD+ SY +L+ AY K+ +EA+ VF +M AG
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ GK + +L M G P++ S+ L+EAY + G A +F +MQ G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A TY ++L F + ++ + ++F L + + PD ++++I ++ + G ++
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLF---LEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN----YKEVSKIYDQMQRSGLQPDVVSYALL 196
+ +F M + I TY ++ F +++ KI M + + P +Y +
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGII-FACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
I A+G+A EEAL F M + G
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVG 487
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 58 EAYGRGGRYNNAEAIFRRMQ-TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDER 116
E GRG + + +F+ MQ + +P+ Y I++ + EVF DE
Sbjct: 114 EFAGRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF-----DEM 167
Query: 117 APLKPDQKMFH--MMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET----N 170
+ +F +I Y + G YE + ++ M +I S +TYN++++ +
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 171 YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
++ + ++ +M+ G+QPD+V+Y L++A +EA VF M D G+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 120/215 (55%), Gaps = 16/215 (7%)
Query: 13 FSEMDS--IR--------LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGR 62
F+EMD+ IR LI G +++A ++L+ M + PNVV+ +AL++A+ +
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 63 GGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD 122
G+ AE ++ M +P TY ++ F ++ EA+ +FE ++S + P+
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD---CFPN 394
Query: 123 QKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVS-KIYD 179
++ +I + KA E+ ++F M+QR + +TVTYN+L+ F+ +++ KI+
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 180 QMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
+M G+ PD+++Y++L++ K + E+AL VFE
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 105/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+G EAEK+ M K P++ ++++L+ + R + A+ +F M +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++K F + + +E E+F + + L + ++ +I +AG+ +
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREM---SQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+K+F M +P +TY+ L+ Y ++ K +++ +Q+S ++PD+ +Y ++I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
KA + E+ +F + GV
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGV 531
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K+G+ + A +L M K +VV +T +++A N+A +F M G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY +++ ++ +A + ++ ER + P+ F +I + K G
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI--ER-KINPNVVTFSALIDAFVKEGKLV 342
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K++ M +R I TY+SL+ E +++ M P+VV+Y LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ KA+R EE + +F EM G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGL 426
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ A +L M K+GY P++V+ ++L+ Y G R + A A+ +M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +T+ ++ NK EA + + +++ +PD + ++ K G+ +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA---RGCQPDLFTYGTVVNGLCKRGDID 237
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A + M + +I V Y +++ NYK V+ ++ +M G++P+VV+Y LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 198 NAYGKARREEEALAVFEEMLD 218
R +A + +M++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIE 318
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K E ++ M++ G N V++ L++ + G + A+ IF++M + G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY I+L + K ++A VFE L +++ ++PD +++MI KAG E
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYL---QKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+F ++ + + + + Y +++S +E ++ +M+ G P+ +Y LI
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
A + + + + +EM G
Sbjct: 578 RARLRDGDKAASAELIKEMRSCG 600
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
+EA ++ M G P++ ++ ++ + G + A ++ ++M+ E + Y I
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
+ +A +F + + ++P+ ++ +I G + A ++ S M +
Sbjct: 262 IDALCNYKNVNDALNLFTEM---DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 152 REIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
R+I + VT+++L+ E E K+YD+M + + PD+ +Y+ LIN + R +E
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 209 ALAVFEEML 217
A +FE M+
Sbjct: 379 AKHMFELMI 387
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 6/172 (3%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P++V L+ A + +++ ++ RMQ L +Y I++ F ++ A V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
++ + +PD ++ Y +A + M E +TVT+N+L+
Sbjct: 138 LGKMM---KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 167 --FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
E + D+M G QPD+ +Y ++N K + AL++ ++M
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G EA +L M GY P+V+S++ ++ Y R G + + M+ G +P++ Y
Sbjct: 703 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 762
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
I+ K EAEE F ++ R + PD ++ +I + K G+ A K F
Sbjct: 763 GSIIGLLCRICKLAEAEEAFSEMI---RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 819
Query: 149 MTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARR 205
M R+I +TY +++S + E K++ +M GL+PD V++ LIN Y KA
Sbjct: 820 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 879
Query: 206 EEEALAVFEEMLDAGV 221
++A V M+ AG
Sbjct: 880 MKDAFRVHNHMIQAGC 895
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 44/247 (17%)
Query: 15 EMDSI---RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
E DS+ LI + K G+ +A ++ +M + G +PNVV++T L++ + G ++A
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+ M +G +P+ TY I+ + +EA ++ E A L D + ++
Sbjct: 921 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF---EAAGLNADTVTYTTLMD 977
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM-------------------------- 165
Y K+G +KA+++ M + + + VT+N LM
Sbjct: 978 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037
Query: 166 ------------SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
N K + IY M G+ PD +Y L+ + KAR +EA +F
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 214 EEMLDAG 220
+EM G
Sbjct: 1098 QEMKGKG 1104
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K GN EA K++ G + V++T LM+AY + G + A+ I + M G
Sbjct: 940 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +T+ +++ F ++ E++ +L+ A P+ F+ ++ Y N +
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA---PNATTFNSLVKQYCIRNNLK 1056
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ M R + TY +L+ N KE ++ +M+ G V +Y++LI
Sbjct: 1057 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ K ++ EA VF++M G+
Sbjct: 1117 KGFLKRKKFLEAREVFDQMRREGL 1140
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+G+ A K M+ P+V+++TA++ + + G A +F M G
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP ++T+ ++ + + K+A V ++ +A P+ + +I K G+ +
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTTLIDGLCKEGDLD 916
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ M + + + TYNS+ + N +E K+ + + +GL D V+Y L+
Sbjct: 917 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+AY K+ ++A + +EML G+
Sbjct: 977 DAYCKSGEMDKAQEILKEMLGKGL 1000
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ K G ++A++IL M G P +V+ LM + G + E + M G
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A T+ ++K + N K A +++ + S + PD K + ++ + KA N +
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS---RGVGPDGKTYENLVKGHCKARNMK 1091
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +F M + S TY+ L+ + E +++DQM+R GL D +
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 1151
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ K +R + + +E+++
Sbjct: 1152 DTKYKGKRPDTIVDPIDEIIE 1172
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G EA +L M GY P+V+S++ ++ Y R G + + M+ G +P++ Y
Sbjct: 703 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 762
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
I+ K EAEE F ++ R + PD ++ +I + K G+ A K F
Sbjct: 763 GSIIGLLCRICKLAEAEEAFSEMI---RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 819
Query: 149 MTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARR 205
M R+I +TY +++S + E K++ +M GL+PD V++ LIN Y KA
Sbjct: 820 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 879
Query: 206 EEEALAVFEEMLDAGV 221
++A V M+ AG
Sbjct: 880 MKDAFRVHNHMIQAGC 895
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 44/247 (17%)
Query: 15 EMDSI---RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
E DS+ LI + K G+ +A ++ +M + G +PNVV++T L++ + G ++A
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+ M +G +P+ TY I+ + +EA ++ E A L D + ++
Sbjct: 921 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF---EAAGLNADTVTYTTLMD 977
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM-------------------------- 165
Y K+G +KA+++ M + + + VT+N LM
Sbjct: 978 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037
Query: 166 ------------SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
N K + IY M G+ PD +Y L+ + KAR +EA +F
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 214 EEMLDAG 220
+EM G
Sbjct: 1098 QEMKGKG 1104
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K GN EA K++ G + V++T LM+AY + G + A+ I + M G
Sbjct: 940 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +T+ +++ F ++ E++ +L+ A P+ F+ ++ Y N +
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA---PNATTFNSLVKQYCIRNNLK 1056
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ M R + TY +L+ N KE ++ +M+ G V +Y++LI
Sbjct: 1057 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ K ++ EA VF++M G+
Sbjct: 1117 KGFLKRKKFLEAREVFDQMRREGL 1140
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+G+ A K M+ P+V+++TA++ + + G A +F M G
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP ++T+ ++ + + K+A V ++ +A P+ + +I K G+ +
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTTLIDGLCKEGDLD 916
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ M + + + TYNS+ + N +E K+ + + +GL D V+Y L+
Sbjct: 917 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+AY K+ ++A + +EML G+
Sbjct: 977 DAYCKSGEMDKAQEILKEMLGKGL 1000
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ K G ++A++IL M G P +V+ LM + G + E + M G
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A T+ ++K + N K A +++ + S + PD K + ++ + KA N +
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS---RGVGPDGKTYENLVKGHCKARNMK 1091
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +F M + S TY+ L+ + E +++DQM+R GL D +
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 1151
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ K +R + + +E+++
Sbjct: 1152 DTKYKGKRPDTIVDPIDEIIE 1172
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K G+ N A + M G P+VV +T+L+ GR+ +A+++ R M
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +T+ ++ FV+ KF +AEE++ ++ R + P+ + +I + G +
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMI---RMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+AR+MF LM + V Y SL++ K+V KI+ +M + GL + ++Y LI
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+G+ + A VF M+ GV
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI EA ++ M +MG P+VV +T ++++ + G N A ++F +M+ G
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P + Y ++ ++++A+ + + + +KPD F+ +I + K G +
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGM---TKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++++ M + I + TY SL+ E E +++ M+ G PDVV+Y LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N + K ++ ++A+ +F EM G+
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+G F +AE++ M +M APN+ ++T+L+ + G + A +F M+T G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P + Y ++ F + K +A ++F + + L + + +I + + G
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEM---SQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQR---SGLQPDVVSYA 194
A+++FS M R +P + TYN L + + K+ I++ MQ+ G+ P++ +Y
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 195 LLINAYGKARREEEALAVFEEM 216
+L++ + E+AL VFE+M
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDM 451
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 3/204 (1%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K ++A KI M++ G N +++T L++ +G+ G+ N A+ +F M + G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY ++L K K+A +FE + E + P+ ++++++ G E
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA +F M +RE+ +TY + M K ++ + G++P+VV+Y +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + + EA +F +M + GV
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGV 526
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 100/202 (49%), Gaps = 12/202 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ G + +A+ +L M K P+V++ AL++A+ + G++ +AE ++ M +
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY ++ F EA ++F + E PD + +I + K +
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLM---ETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK------IYDQMQRSGLQPDVVSYA 194
A K+F M+Q+ + +T+TY +L+ + +V K ++ M G+ P++ +Y
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQ---GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYN 391
Query: 195 LLINAYGKARREEEALAVFEEM 216
+L++ + ++AL +FE+M
Sbjct: 392 VLLHCLCYNGKVKKALMIFEDM 413
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
S +D +L+ K F+ + ++ MG + ++ + LM + + + A +
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
+M LG EP +T+ ++ F GN+ +EA + ++ +KPD M+ +I
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV---EMGIKPDVVMYTTIIDSL 187
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDV 190
K G+ A +F M I V Y SL++ N +++ + M + ++PDV
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 191 VSYALLINAYGKARREEEALAVFEEML 217
+++ LI+A+ K + +A ++ EM+
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMI 274
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 6/189 (3%)
Query: 31 FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQI 90
FNEA + T+M + P+++ T L+ + +++ + +Q +G T +
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
++ F + ++ A ++ + +PD F +I + E+A M + M
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMM---KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 151 QREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREE 207
+ I V Y +++ V+ ++DQM+ G++PDVV Y L+N + R
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 208 EALAVFEEM 216
+A ++ M
Sbjct: 230 DADSLLRGM 238
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 86 LTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
Y+ IL+ + +F EA ++F ++ E PL P F ++ + K ++ +
Sbjct: 38 CNYREILRNGLHSLQFNEALDLFTHMV--ESRPL-PSIIDFTKLLNVIAKMKKFDVVINL 94
Query: 146 FSLMTQREIPHSTVTYNSLMSFETNYKE---VSKIYDQMQRSGLQPDVVSYALLINAYGK 202
+ + H T N LM+ + S +M + G +PD+V++ LIN +
Sbjct: 95 CDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 203 ARREEEALAVFEEMLDAGV 221
R EEA+++ +M++ G+
Sbjct: 155 GNRMEEAMSMVNQMVEMGI 173
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ ++ ++A ++ M ++GY P++V++ A++++ + R N+A F+ ++ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ +++ +A + ++ + + P+ + ++ + K G
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMI---KKKITPNVITYSALLDAFVKNGKVL 277
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A+++F M + I VTY+SL + E ++++D M G DVVSY LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N + KA+R E+ + +F EM G+
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGL 361
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 105/199 (52%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ +++A ++L+ M K PNV++++AL++A+ + G+ A+ +F M +
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +TY ++ ++ EA ++F+ ++S + L D ++ +I + KA E
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS--KGCL-ADVVSYNTLINGFCKAKRVE 347
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
K+F M+QR + +TVTYN+L+ +V K + QM G+ PD+ +Y +L+
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 198 NAYGKARREEEALAVFEEM 216
E+AL +FE+M
Sbjct: 408 GGLCDNGELEKALVIFEDM 426
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 103/191 (53%), Gaps = 6/191 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A IL M K+GY P+ V+ +L+ + R R ++A ++ +M +G +P + Y I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
+ + + +A + F+ + ER ++P+ + ++ + + A ++ S M +++
Sbjct: 199 SLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 154 IPHSTVTYNSLM-SFETNYK--EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
I + +TY++L+ +F N K E +++++M R + PD+V+Y+ LIN R +EA
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 211 AVFEEMLDAGV 221
+F+ M+ G
Sbjct: 316 QMFDLMVSKGC 326
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +EA ++ M G +VVS+ L+ + + R + +FR M G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY +++ F + +A+E F + + + PD +++++ G E
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM---DFFGISPDIWTYNILLGGLCDNGELE 417
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA +F M +RE+ VTY ++ M +E ++ + GL+PD+V+Y ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ E A++ +M G+
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGL 501
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 6/201 (2%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
RL + N+A + + M K P++V L+ A + +Y+ ++ ++M+ L
Sbjct: 55 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G T+ I++ F + A + +L + +PD+ ++ + +
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKML---KLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALL 196
A + M + V YN+++ K V+ +D +++R G++P+VV+Y L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 197 INAYGKARREEEALAVFEEML 217
+N + R +A + +M+
Sbjct: 232 VNGLCNSSRWSDAARLLSDMI 252
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 96.7 bits (239), Expect = 9e-21, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K G EA+++ M G PN + L+ +G+ G + A A+F+RM G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY +++ + E F+ L + + L PD ++++I K+ E
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL---KESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 141 KARKMFSLM-TQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+A +F+ M T R I TYNSL + +E KIY+++QR+GL+P+V ++ L
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
I Y + + E A AV++ M+ G
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K GNF EA L M G PN+ ++ L+ R R ++A +F M++LG
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP---------------------- 118
+P+A TY + + + + A E FE + + AP
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 119 ----------LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
L PD ++MM+ Y K G ++A K+ S M + + NSL++
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN-- 546
Query: 169 TNYK-----EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
T YK E K++ +M+ L+P VV+Y L+ GK + +EA+ +FE M+ G
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 87.0 bits (214), Expect = 8e-18, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 26 GKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSA 85
G+ G NEA +IL M+ G P+VV++T L++A + + A+ +F +M+T +P
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 86 LTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
+TY +L F + ++ + + D P D F +++ KAGN+ +A
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP---DVVTFTILVDALCKAGNFGEAFDT 385
Query: 146 FSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGK 202
+M + I + TYN+L+ + +++ M+ G++P +Y + I+ YGK
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 203 ARREEEALAVFEEMLDAGV 221
+ AL FE+M G+
Sbjct: 446 SGDSVSALETFEKMKTKGI 464
Score = 85.5 bits (210), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNA-EAIFRRMQTL 79
L+ A+GK G +E ++ M+ N ++H ++ + G ++A + + M
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P+A TY ++ + + EA+++FE +L +P+ +++++I + KAG
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD---YGCRPNCAIYNILINGFGKAGEA 942
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALL 196
+ A +F M + + TY+ L+ V + + +++ SGL PDVV Y L+
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 197 INAYGKARREEEALAVFEEM 216
IN GK+ R EEAL +F EM
Sbjct: 1003 INGLGKSHRLEEALVLFNEM 1022
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
I I +GK G+ A + M G APN+V+ A + + + GR A+ IF ++
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
+G P ++TY +++K + + + EA ++ ++ + +PD + + +I KA
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN---GCEPDVIVVNSLINTLYKADR 553
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
++A KMF M + ++ + VTYN+L++ +E ++++ M + G P+ +++
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 196 LINAYGKARREEEALAVFEEMLDAG 220
L + K AL + +M+D G
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMG 638
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
I L+ + + ++ + M K G+ P+VV+ T L++A + G + A M+
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G P+ TY ++ + ++ +A E+F + E +KP + + I Y K+G+
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNM---ESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 139 YEKARKMFSLMTQREIPHSTVTYN-SLMSFET--NYKEVSKIYDQMQRSGLQPDVVSYAL 195
A + F M + I + V N SL S +E +I+ ++ GL PD V+Y +
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 196 LINAYGKARREEEALAVFEEMLDAG 220
++ Y K +EA+ + EM++ G
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 41/199 (20%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + K G +EA K+L+ M + G P+V+ +L+ + R + A +F RM+ +
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +TY +L + K +EA E+FE
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEG------------------------------ 598
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
M Q+ P +T+T+N+L EV+ K+ +M G PDV +Y +I
Sbjct: 599 --------MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 198 NAYGKARREEEALAVFEEM 216
K + +EA+ F +M
Sbjct: 651 FGLVKNGQVKEAMCFFHQM 669
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 65 RYNN---AEAIFRRM-QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
++NN A +F + + LG +P TY +++ +E + + A++VF L +
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF---LQVKSTGCI 817
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---- 176
PD ++ ++ Y K+G ++ +++ M+ E +T+T+N ++S V
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 177 IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
YD M P +Y LI+ K+ R EA +FE MLD G
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 21 LITAHGKQGNFNEAEKIL-TYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+I+ K GN ++A + M+ ++P ++ L++ + GR A+ +F M
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P+ Y I++ F + + A +F+ ++ + ++PD K + +++ G
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG---VRPDLKTYSVLVDCLCMVGRV 977
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRS-GLQPDVVSYAL 195
++ F + + + V YN +++ +E ++++M+ S G+ PD+ +Y
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
LI G A EEA ++ E+ AG+
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGL 1063
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/232 (22%), Positives = 88/232 (37%), Gaps = 41/232 (17%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
+G +A L M + G+ N S+ L+ + A ++RRM G PS T
Sbjct: 166 KGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT 225
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y ++ V K ++ + V L E LKP+ F + I + +AG +A ++
Sbjct: 226 YSSLM---VGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 148 LMTQREIPHSTVTYNSLMS--------------FET------------------------ 169
M VTY L+ FE
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 170 NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ V + + +M++ G PDVV++ +L++A KA EA + M D G+
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT-LGPEPSALT 87
G +E + + G P+VV + ++ G+ R A +F M+T G P T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y ++ +EA +++ + +RA L+P+ F+ +I Y +G E A ++
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEI---QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 148 LMTQREIPHSTVTYNSL 164
M +T TY L
Sbjct: 1092 TMVTGGFSPNTGTYEQL 1108
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 113/210 (53%), Gaps = 12/210 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +++ K+L M K +PNVV+ + L++++ + G+ A+ + + M G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ F + N+ +EA ++ + ++S PD F+++I Y KA +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS---KGCDPDIMTFNILINGYCKANRID 420
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVS-KIYDQMQRSGLQPDVVSYALLI 197
++F M+ R + +TVTYN+L+ ++ EV+ K++ +M ++PD+VSY +L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 198 NAYGKARREEEALAVFEEM------LDAGV 221
+ E+AL +F ++ LD G+
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K G A ++L M + + V ++ +++ + G +NA +F M+ G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY ++ F ++ + ++ ++ + + P+ F ++I + K G
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMI---KRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ M QR I +T+TYNSL+ E +E ++ D M G PD++++ +LI
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N Y KA R ++ L +F EM GV
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGV 434
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 104/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K+G EA+++L M + G APN +++ +L++ + + R A + M + G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +T+ I++ + + N+ + E+F + + + ++ ++ + ++G E
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREM---SLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+K+F M R + V+Y L+ + E+ K I+ ++++S ++ D+ Y ++I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ A + ++A +F + GV
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGV 539
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K ++ ++ M+ G N V++ L++ + + G+ A+ +F+ M +
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P ++Y+I+L + + ++A E+F + E++ ++ D ++ ++I+ A +
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKI---EKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A +F + + + YN ++S +SK ++ +M G PD ++Y +LI
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
A+ A + EEM +G
Sbjct: 586 RAHLGDDDATTAAELIEEMKSSG 608
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 43 KMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFK 102
K+GY P+ V L+ R + A + RM +G +P+ +T ++ K
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 103 EA--------EEVFEP------------------------LLSDERAPLKPDQKMFHMMI 130
+A E F+P L E +K D + ++I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 131 YMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQ 187
K G+ + A +F+ M + +TYN+L+ N + + +K+ M + +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
P+VV++++LI+++ K + EA + +EM+ G+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 7/198 (3%)
Query: 28 QGN-FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
QGN +A +++ M +MG+ P+VV + +++ + G N+A +F RM+ G A+
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++ ++ +A + ++ + + P+ F +I ++ K G + +A K++
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRD---IVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 147 SLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
MT+R + TYNSL + E ++ D M G PDVV+Y LIN + K+
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 204 RREEEALAVFEEMLDAGV 221
+R +E +F EM G+
Sbjct: 328 KRVDEGTKLFREMAQRGL 345
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K G N+A ++ M + G + V++ +L+ GR+++A + R M
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +T+ ++ FV+ KF EA +++E + R + PD ++ +I G +
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEM---TRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQMQRSGLQPDVVSYALLI 197
+A++M LM + VTYN+L++ K V +K++ +M + GL D ++Y +I
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 198 NAYGKARREEEALAVFEEM 216
Y +A R + A +F M
Sbjct: 357 QGYFQAGRPDAAQEIFSRM 375
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +EA+++L M G P+VV++ L+ + + R + +FR M G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+TY I++ + + + A+E+F R +P+ + + +++Y E
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFS------RMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA +F M + EI TYN + M N ++ ++ + GL+PDVVSY +I
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + + R+ +++ ++ +M + G+
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
S +D ++++ K N++ + +M G ++ S+ ++ R R+ A ++
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
+M G EP +T ++ F +GN+ +A ++ + E +PD +++ +I
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM---EEMGFRPDVVIYNTIIDGS 184
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDV 190
K G A ++F M + + VTYNSL + + + +++ M + P+V
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 191 VSYALLINAYGKARREEEALAVFEEM 216
+++ +I+ + K + EA+ ++EEM
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEM 270
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 102/198 (51%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K GN A+ + T M++ G PNV+++ +++++ GR+++A+ + R M P +
Sbjct: 22 KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIV 81
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T+ ++ FV+ K EAEE+++ +L R + P ++ MI + K + A++M
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEML---RWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKA 203
M + VT+++L++ K V +I+ +M R G+ + V+Y LI+ + +
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 204 RREEEALAVFEEMLDAGV 221
+ A + EM+ GV
Sbjct: 199 GDLDAAQDLLNEMISCGV 216
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M + +VV TA+++ + G + NA+ +F M G P+ LTY ++ +F +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
+ +A+++ ++ + + PD F +I + K +A +++ M + I +T+T
Sbjct: 61 WSDADQLLRHMIEKQ---INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTIT 117
Query: 161 YNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
YNS++ + + ++ D M G PDVV+++ LIN Y KA+R + + +F EM
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 218 DAGV 221
G+
Sbjct: 178 RRGI 181
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + G +++A+++L +M + P++V+ +AL+ A+ + + + AE I++ M
Sbjct: 51 MIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS 110
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ F + ++ +A+ + + + S PD F +I Y KA +
Sbjct: 111 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS---KGCSPDVVTFSTLINGYCKAKRVD 167
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
++F M +R I +TVTY +L+ ++ D +M G+ PD +++ ++
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Query: 198 NAYGKARREEEALAVFEEM 216
+ +A A+ E++
Sbjct: 228 AGLCSKKELRKAFAILEDL 246
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 109/204 (53%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ ++ + G A +I + M MG P+ S+ +++AYGR G +++AEA+F M+ LG
Sbjct: 340 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 399
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ ++ ++L + + + E + + + + ++PD + + M+ +Y + G +
Sbjct: 400 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSEN---GVEPDTFVLNSMLNLYGRLGQFT 456
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF--ETNYKE-VSKIYDQMQRSGLQPDVVSYALLI 197
K K+ + M TYN L++ + + E + +++ +++ +PDVV++ I
Sbjct: 457 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 516
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
AY + + + L VFEEM+D+G
Sbjct: 517 GAYSRKKLYVKCLEVFEEMIDSGC 540
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
++GN EA + M + P ++ ++ YG+ + + ++ M++ +P+
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++ F ++AEE+FE L D L+PD +++ ++ Y +AG A ++F
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQED---GLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 147 SLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
SLM +YN ++ + + ++++M+R G+ P + S+ LL++AY KA
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 204 RREEEALAVFEEMLDAGV 221
R + A+ +EM + GV
Sbjct: 418 RDVTKCEAIVKEMSENGV 435
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 47/264 (17%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+ EW+ + + + LI A+G++ + EAE + + + Y P ++ L++AY
Sbjct: 141 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEG-----NKFKEAEEVFEPLLSDE 115
G AE + MQ P + + ++EG +EA +VF+ + +
Sbjct: 201 CMAGLIERAEVVLVEMQNHHVSPKTIGVT-VYNAYIEGLMKRKGNTEEAIDVFQRM---K 256
Query: 116 RAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYK 172
R KP + +++MI +Y KA + K++ M + + TY +L++ E +
Sbjct: 257 RDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 316
Query: 173 EVSKIYDQMQRSGLQPDV-----------------------------------VSYALLI 197
+ +I++Q+Q GL+PDV SY +++
Sbjct: 317 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 376
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+AYG+A +A AVFEEM G+
Sbjct: 377 DAYGRAGLHSDAEAVFEEMKRLGI 400
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I +GK + K+ M PN+ ++TAL+ A+ R G AE IF ++Q G
Sbjct: 270 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP Y +++++ A E+F + + +PD+ +++M+ Y +AG +
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A +F M + I + ++ L+S + ++V+K I +M +G++PD ++
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 198 NAYGK 202
N YG+
Sbjct: 447 NLYGR 451
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K GN A + M + +VV ++ ++++ + G +++A ++F M+ G + +
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++ K+ + ++ ++ + PD F +I ++ K G +A++++
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRN---IIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 147 SLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
+ M R I T+TYNSL+ E E ++++D M G +PD+V+Y++LIN+Y KA
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 204 RREEEALAVFEEMLDAGV 221
+R ++ + +F E+ G+
Sbjct: 399 KRVDDGMRLFREISSKGL 416
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+G EA+++ M G AP+ +++ +L++ + + + A +F M + G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP +TY I++ ++ + + + +F + S L P+ ++ ++ + ++G
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISS---KGLIPNTITYNTLVLGFCQSGKLN 437
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+++F M R +P S VTY L+ + E++K I+++MQ+S + + Y ++I
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ A + ++A ++F + D GV
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGV 521
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 103/199 (51%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +++ K+L M P+VV+ +AL++ + + G+ A+ ++ M T G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ F + N EA ++F+ ++S +PD + ++I Y KA +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVS---KGCEPDIVTYSILINSYCKAKRVD 402
Query: 141 KARKMFSLMTQREIPHSTVTYNSL-MSFETNYK--EVSKIYDQMQRSGLQPDVVSYALLI 197
++F ++ + + +T+TYN+L + F + K +++ +M G+ P VV+Y +L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 198 NAYGKARREEEALAVFEEM 216
+ +AL +FE+M
Sbjct: 463 DGLCDNGELNKALEIFEKM 481
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ K ++ ++ ++ G PN +++ L+ + + G+ N A+ +F+ M + G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS +TY I+L + + +A E+FE + +++ + +++++I+ A +
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKM---QKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A +F ++ + + VTYN + + + + E ++ +M+ G PD +Y +LI
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
A+ ++ + EEM G
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCG 590
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+ +EA ++ M G P++V+++ L+ +Y + R ++ +FR + + G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ F + K A+E+F+ ++S + P + +++ G
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS---RGVPPSVVTYGILLDGLCDNGELN 472
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
KA ++F M + + YN ++ N +V ++ + G++PDVV+Y ++I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
K EA +F +M + G
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGC 556
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 43 KMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFK 102
K+GY P+ ++ + L+ + GR + A A+ RM + P +T ++ +
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 103 EAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYN 162
EA + + ++ +PD+ + ++ K+GN A +F M +R I S V Y+
Sbjct: 193 EALVLIDRMV---EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 163 SL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+ + + ++ + ++++M+ G++ DVV+Y+ LI + ++ + EM+
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 8/222 (3%)
Query: 3 EWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGR 62
E LR H S + LI + K GN N A + L M G PN ++T L++ + +
Sbjct: 335 EMLR--HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 63 GGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD 122
G N A + R M G PS +TY ++ K ++A V E + + L PD
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM---KEKGLSPD 449
Query: 123 QKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYD 179
+ ++ + ++ + ++A ++ M ++ I T+TY+SL+ + KE +Y+
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 180 QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+M R GL PD +Y LINAY E+AL + EM++ GV
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 6/192 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ ++G NEA ++L MN G++P+VV++ AL+ + G+ +A A+ M+ G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P ++Y +L F EA V ++ +KPD + +I + + +
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMV---EKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ M + +P TY +L+ E + ++ +++++M G+ PDVV+Y++LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 198 NAYGKARREEEA 209
N K R EA
Sbjct: 563 NGLNKQSRTREA 574
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 6/214 (2%)
Query: 11 WDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAE 70
+ E+ LI + K+GNF++A + M + G P+V+++T+L+ + + G N A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 71 AIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
+M+ G P+ TY ++ F + EA V + + P ++ +I
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN---GFSPSVVTYNALI 422
Query: 131 YMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS-FETNY--KEVSKIYDQMQRSGLQ 187
+ G E A + M ++ + V+Y++++S F +Y E ++ +M G++
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
PD ++Y+ LI + + RR +EA ++EEML G+
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I ++G E +LT MN+ GY+ + V++ L++ Y + G ++ A + M G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS +TY ++ + + A E + + L P+++ + ++ + + G
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQM---RVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ M S VTYN+L++ ++ + + M+ GL PDVVSY+ ++
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + ++ +EAL V EM++ G+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGI 481
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI GN + A + M G PNVV++ L++ Y + + ++ + R M G
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+ ++Y +++ + KE V + R D+ ++ +I Y K GN+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEM---NRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A M + M + + S +TY SL M N + DQM+ GL P+ +Y L+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ + + EA V EM D G
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNG 410
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K ++ K+L M G PN++S+ ++ R GR + M G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+TY ++K + + F +A + +L R L P + +I+ KAGN
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEML---RHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A + M R + + TY +L+ S + E ++ +M +G P VV+Y LI
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N + + E+A+AV E+M + G+
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGL 446
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 30 NFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
N + AE + M + +PNV ++ L+ + G + A +F +M+T G P+ +TY
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
++ + K ++ ++ F+ L S L+P+ ++++I + G ++ + + M
Sbjct: 245 TLIDGYC---KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 150 TQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARRE 206
+R VTYN+L+ E N+ + ++ +M R GL P V++Y LI++ KA
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 207 EEALAVFEEM 216
A+ ++M
Sbjct: 362 NRAMEFLDQM 371
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 56 LMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK-FKEAEEVFEPLLSD 114
++++Y R + A +I Q G P L+Y +L + + AE VF+ +L
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 115 ERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV 174
+ + P+ ++++I + AGN + A +F M + + VTYN+L+ +++
Sbjct: 200 Q---VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 175 S---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
K+ M GL+P+++SY ++IN + R +E V EM
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A+ +G+ +A ++ M + G P+VV+++ L+ + R A+ + ++
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 81 PEPSALTYQI---------------ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKM 125
PS +TY ++K F EA++VFE +L KPD
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH---KPDGTA 642
Query: 126 FHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
+++MI+ + +AG+ KA ++ M + TVT +L+
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I +GK F EA ++ MN+ G PN VS++ L+ Y ++ A ++F M+ +
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
T I++ + + + KEA+ +F L + ++P+ ++ ++ +Y +A +
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSL---RKMDIEPNVVSYNTILRVYGEAELFG 382
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +F LM +++I + VTYN+++ +++ + + +MQ G++P+ ++Y+ +I
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ +GKA + + A +F+++ +GV
Sbjct: 443 SIWGKAGKLDRAATLFQKLRSSGV 466
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ +G+ F EA + M + NVV++ +++ YG+ + A + + MQ+ G
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+A+TY I+ + + K A +F+ L S + ++ DQ ++ MI Y + G
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRS---SGVEIDQVLYQTMIVAYERVGLMG 487
Query: 141 KARKMF-SLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
A+++ L IP T ++++ +E + ++ Q SG D+ + +IN
Sbjct: 488 HAKRLLHELKLPDNIPRETAI--TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINL 545
Query: 200 YGKARREEEALAVFEEMLDAG 220
Y + +R + VFE+M AG
Sbjct: 546 YSRNQRYVNVIEVFEKMRTAG 566
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 31 FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQI 90
F+ A + M + AP+ +++ L+ ++G+ G +++A + ++M+ + Y
Sbjct: 171 FDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSN 230
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
+++ + +A +F L +R+ + PD ++ MI +Y KA + +AR + M
Sbjct: 231 LIELSRRLCDYSKAISIFSRL---KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMN 287
Query: 151 QREIPHSTVTYNSLMS-FETNYK--EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREE 207
+ + +TV+Y++L+S + N+K E ++ +M+ D+ + ++I+ YG+ +
Sbjct: 288 EAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVK 347
Query: 208 EALAVF 213
EA +F
Sbjct: 348 EADRLF 353
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A N N+A + T M+ G PNVV++ +L+ GR+++A + M
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +T+ ++ FV+ K EAE++++ ++ + + PD + +I + +
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+A+ MF LM ++ + VTYN+L+ K V +++ +M + GL + V+Y LI
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + +AR + A VF++M+ GV
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGV 462
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 13 FSEMDS--IR--------LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGR 62
F+EMD+ IR LI G +++A ++L+ M + PNVV+ +AL++A+ +
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 63 GGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD 122
G+ AE ++ M +P TY ++ F ++ EA+ +FE ++S + P+
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD---CFPN 395
Query: 123 QKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYD 179
++ +I + KA ++ ++F M+QR + +TVTY +L+ +E ++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 180 QMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
QM G+ PD+++Y++L++ + E AL VFE
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ + A +L M K+GY P++V+ +L+ + G R ++A ++ +M +G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P + T+ ++ N+ EA + + ++ +PD + +++ K G+ +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV---KGCQPDLVTYGIVVNGLCKRGDID 238
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A + M Q +I V YN+++ NYK V+ ++ +M G++P+VV+Y LI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 198 NAYGKARREEEALAVFEEMLD 218
R +A + +M++
Sbjct: 299 RCLCNYGRWSDASRLLSDMIE 319
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K +E ++ M++ G N V++T L+ + + +NA+ +F++M + G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY I+L K + A VFE L +R+ ++PD +++MI KAG E
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYL---QRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+F ++ + + + VTY ++MS +E ++ +M+ G PD +Y LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 198 NAYGKARREEEALAVFEEM 216
A+ + + + + EM
Sbjct: 579 RAHLRDGDKAASAELIREM 597
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K+G+ + A +L M + P VV + +++A N+A +F M G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY +++ ++ +A + ++ ER + P+ F +I + K G
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI--ER-KINPNVVTFSALIDAFVKEGKLV 343
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K++ M +R I TY+SL+ E +++ M P+VV+Y LI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ KA+R +E + +F EM G+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGL 427
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P++V + L+ A + +++ ++ +MQ LG + TY I++ F ++ A V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
++ + +PD + ++ + A + M + + T+N+L+
Sbjct: 139 LAKMM---KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 167 -FETN-YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
F N E + D+M G QPD+V+Y +++N K + AL++ ++M
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 103/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K G+ A +L+ M + +VV + A+++ + G + +A+ +F M G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ +F ++ +AE++ ++ ER + PD F +I K G
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI--ER-QINPDVVTFSALINALVKEGKVS 163
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +++ M +R I +T+TYNS++ + + ++ D M PDVV+++ LI
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N Y KA+R + + +F EM G+
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGI 247
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G+ A+ + T M+ G P+V++++ +++++ R GR+ +AE + R M P +
Sbjct: 88 KDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVV 147
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T+ ++ V+ K EAEE++ +L R + P ++ MI + K A++M
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDML---RRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKA 203
M + VT+++L++ K V +I+ +M R G+ + V+Y LI+ + +
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 204 RREEEALAVFEEMLDAGV 221
+ A + M+ +GV
Sbjct: 265 GDLDAAQDLLNVMISSGV 282
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + + G + +AE++L M + P+VV+ +AL+ A + G+ + AE I+ M G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ F + ++ +A+ + + + S PD F +I Y KA +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS---KSCSPDVVTFSTLINGYCKAKRVD 233
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
++F M +R I +TVTY +L+ ++ D M SG+ P+ +++ ++
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 198 NAYGKARREEEALAVFEEM 216
+ + +A A+ E++
Sbjct: 294 ASLCSKKELRKAFAILEDL 312
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ F EA ++ + +GY PNVV + ++++ G+ N A + + M+ +G
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ + + + ++ R + PD F +I +Y K G
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMM---RMGISPDVITFSALIDVYGKEGQLL 271
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A+K ++ M QR + + VTYNSL + E K+ + + G P+ V+Y LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N Y KA+R ++ + + M GV
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGV 355
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 6/211 (2%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
S +D RL+ A K + + ++ +G + ++ S T L++ + R R + A +
Sbjct: 78 SIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCL 137
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
+M LG EPS +T+ ++ F N+F EA + + ++ +P+ +++ +I
Sbjct: 138 GKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG---LGYEPNVVIYNTIIDSL 194
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVS-KIYDQMQRSGLQPDV 190
+ G A + M + I VTYNSL++ F + VS +I M R G+ PDV
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 191 VSYALLINAYGKARREEEALAVFEEMLDAGV 221
++++ LI+ YGK + EA + EM+ V
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LIT G + + +IL+ M +MG +P+V++ +AL++ YG+ G+ A+ + M
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ EA++V L+S P+ ++ +I Y KA +
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS---KGFFPNAVTYNTLINGYCKAKRVD 341
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K+ +M++ + T TYN+L + K+ +M G+ PD+ ++ +L+
Sbjct: 342 DGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
Query: 198 NAYGKARREEEALAVFEEM 216
+ + +AL E++
Sbjct: 402 DGLCDHGKIGKALVRLEDL 420
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +EA+K+L + G+ PN V++ L+ Y + R ++ I M G
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ TY + + + + KF AE+V ++S + PD F++++ G
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS---CGVHPDMYTFNILLDGLCDHGKIG 411
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
KA + + + +TYN ++ +V ++ + G+ PDV++Y ++
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Query: 198 NAYGKARREEEALAVFEEM 216
+ R EA ++ +M
Sbjct: 472 IGLRRKRLWREAHELYRKM 490
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + + A L M K+G+ P++V+ +L+ + RG R +A +F +M +G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ + Y I+ K K+ + + L E+ + PD ++ +I +G +
Sbjct: 182 YKPNVVIYNTIIDGLC---KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A +M S MT+REI T+N+L+ E E + Y++M R L PD+V+Y+LLI
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
R +EA +F M+ G
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGC 322
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 105/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ G +++A ++++ M K P+V + AL++A + GR + AE + M
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +TY +++ ++ EAEE+F ++S PD + ++I Y K+ E
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS---KGCFPDVVTYSILINGYCKSKKVE 343
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
K+F M+QR + +TVTY L+ +++ +I+ +M G+ P++++Y +L+
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + E+AL + +M G+
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGM 427
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K + A +L M K G P+VV++ +L+ GR+++A + M
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P T+ ++ V+ + EAEE +E ++ R L PD + ++IY +
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMI---RRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+A +MF M + VTY+ L++ K+V K++ +M + G+ + V+Y +LI
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
Y +A + A +F M+ GV
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGV 392
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 31 FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQI 90
+EAE++ +M G P+VV+++ L+ Y + + + +F M G + +TY I
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
+++ + K AEE+F ++ + P+ ++++++ G EKA + + M
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVF---CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 151 QREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSY-ALLINAYGKARRE 206
+ + VTYN ++ EV+ IY + GL PD+ +Y +++ Y K R
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR- 482
Query: 207 EEALAVFEEMLDAGV 221
EA A+F +M + G+
Sbjct: 483 READALFRKMKEDGI 497
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 8/206 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI AHG+ G + A ++ M + AP+ ++ L+ A G G + A + ++M G
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +T+ I+L + G ++ +A FE + + A ++PD F+++IY K G
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELM---KGAKVRPDTTTFNIIIYCLSKLGQSS 300
Query: 141 KARKMFSLMTQR--EIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
+A +F+ M ++ E VT+ S+M S + + +++ M GL+P++VSY
Sbjct: 301 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
L+ AY AL+V ++ G+
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGI 386
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A+G G EA +I M + G PNVVS L+ A R + N + + Q+ G
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 490
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ Y + +++ + ++A +++ + + +K D F ++I + Y
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSM---RKKKVKADSVTFTILISGSCRMSKYP 547
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A M IP + Y+S++ S + E I++QM+ +G +PDV++Y ++
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+AY + + +A +F EM G+
Sbjct: 608 HAYNASEKWGKACELFLEMEANGI 631
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ G A +L + + G P+VVS+T L+ +YGR + A+ +F M+
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 420
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +TY ++ + EA E+F + E+ +KP+ ++ ++
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAACSRSKKKV 477
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+ S R I +T YNS + N E+ K +Y M++ ++ D V++ +LI
Sbjct: 478 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + + EA++ +EM D +
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSI 561
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
+G + M G PN+VS+ ALM AY G A ++ ++ G P ++
Sbjct: 333 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 392
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y +L ++ + +A+EVF + + R KP+ ++ +I Y G +A ++F
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERR---KPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 148 LMTQREIPHSTVTYNSLMSFETNYKE---VSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
M Q I + V+ +L++ + K+ V + Q G+ + +Y I +Y A
Sbjct: 450 QMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAA 509
Query: 205 REEEALAVFEEM 216
E+A+A+++ M
Sbjct: 510 ELEKAIALYQSM 521
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ + + EA L M + +++++ AY + G+ AE+IF +M+ G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP + Y +L + K+ +A E+F L E ++PD ++ + K G
Sbjct: 596 CEPDVIAYTSMLHAYNASEKWGKACELF---LEMEANGIEPDSIACSALMRAFNKGGQPS 652
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYAL----- 195
+ LM ++EIP + + + S +E + D +Q + P + S ++
Sbjct: 653 NVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQM--MDPYLPSLSIGLTNQ 710
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
+++ +GK+ + E + +F +++ +GV
Sbjct: 711 MLHLFGKSGKVEAMMKLFYKIIASGV 736
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 12/210 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +++ K+L M K P+VV+ +AL++ + + G+ AE + + M G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ F + N+ +A + + ++S P+ + F+++I Y KA +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS---KGCGPNIRTFNILINGYCKANLID 404
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVSK-IYDQMQRSGLQPDVVSYALLI 197
++F M+ R + TVTYN+L+ E EV+K ++ +M ++PD+VSY +L+
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 198 NAYGKARREEEALAVFEEM------LDAGV 221
+ E+AL +FE++ LD G+
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+ ++A +L M G PN+ + L+ Y + ++ +FR+M G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+TY +++ F E K + A+E+F+ ++S ++PD + +++ G E
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR---VRPDIVSYKILLDGLCDNGEPE 474
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
KA ++F + + ++ YN ++ N +V +D + G++PDV +Y ++I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
K EA +F +M + G
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDG 557
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +G +EA +++ M +MG+ P +++ AL+ G+ ++A + RM G
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +TY +LK + + A E+ + E +K D + ++I K G+ +
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKM---EERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A +F+ M + + Y +L+ + + + +K+ M + + PDVV+++ LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + K + EA + +EM+ G+
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGI 348
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+G EAE++ M + G +P+ V++T+L++ + + + + A + M + G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ T+ I++ + + N + E+F + + D ++ +I + + G E
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKM---SLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+++F M R + V+Y L+ + E K I++++++S ++ D+ Y ++I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ A + ++A +F + GV
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGV 523
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 43 KMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFK 102
K+GY P+ V+ + L+ GR + A + RM +G +P+ +T ++ K
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 103 EAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYN 162
+A + + ++ +P++ + ++ + K+G A ++ M +R+I V Y+
Sbjct: 195 DAVLLIDRMVE---TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 163 SL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+ + + + ++++M+ G + D++ Y LI + A R ++ + +M+
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 8/206 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI AHG+ G + A ++ M + AP+ ++ L+ A G G + A + ++M G
Sbjct: 52 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 111
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +T+ I+L + G ++ +A FE + + A ++PD F+++IY K G
Sbjct: 112 VGPDLVTHNIVLSAYKSGRQYSKALSYFELM---KGAKVRPDTTTFNIIIYCLSKLGQSS 168
Query: 141 KARKMFSLMTQR--EIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
+A +F+ M ++ E VT+ S+M S + + +++ M GL+P++VSY
Sbjct: 169 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
L+ AY AL+V ++ G+
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGI 254
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A+G G EA +I M + G PNVVS L+ A R + N + + Q+ G
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 358
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ Y + +++ + ++A +++ + + +K D F ++I + Y
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSM---RKKKVKADSVTFTILISGSCRMSKYP 415
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A M IP + Y+S++ S + E I++QM+ +G +PDV++Y ++
Sbjct: 416 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+AY + + +A +F EM G+
Sbjct: 476 HAYNASEKWGKACELFLEMEANGI 499
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ G A +L + + G P+VVS+T L+ +YGR + A+ +F M+
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 288
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +TY ++ + EA E+F + E+ +KP+ ++ ++
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAACSRSKKKV 345
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+ S R I +T YNS + N E+ K +Y M++ ++ D V++ +LI
Sbjct: 346 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + + EA++ +EM D +
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSI 429
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
+G + M G PN+VS+ ALM AY G A ++ ++ G P ++
Sbjct: 201 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 260
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y +L ++ + +A+EVF + + R KP+ ++ +I Y G +A ++F
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERR---KPNVVTYNALIDAYGSNGFLAEAVEIFR 317
Query: 148 LMTQREIPHSTVTYNSLMSFETNYKE---VSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
M Q I + V+ +L++ + K+ V + Q G+ + +Y I +Y A
Sbjct: 318 QMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAA 377
Query: 205 REEEALAVFEEM 216
E+A+A+++ M
Sbjct: 378 ELEKAIALYQSM 389
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ + + EA L M + +++++ AY + G+ AE+IF +M+ G
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP + Y +L + K+ +A E+F L E ++PD ++ + K G
Sbjct: 464 CEPDVIAYTSMLHAYNASEKWGKACELF---LEMEANGIEPDSIACSALMRAFNKGGQPS 520
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYAL----- 195
+ LM ++EIP + + + S +E + D +Q + P + S ++
Sbjct: 521 NVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQM--MDPYLPSLSIGLTNQ 578
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
+++ +GK+ + E + +F +++ +GV
Sbjct: 579 MLHLFGKSGKVEAMMKLFYKIIASGV 604
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 56 LMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDE 115
++ + R + A +F MQ +P A TY ++ +++ A + + +L
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML--- 73
Query: 116 RAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS 175
RA + P + ++ +I +GN+ +A ++ MT + VT+N ++S + ++ S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 176 KI---YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
K ++ M+ + ++PD ++ ++I K + +AL +F M
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 107/199 (53%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ G +++A ++L+ M + PN+V+ AL++A+ + G++ AE ++ M
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P TY ++ F ++ +A+++FE ++S + PD ++ +I + K+ E
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD---CFPDVVTYNTLIKGFCKSKRVE 417
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
++F M+ R + TVTY +L+ + + K++ QM G+ PD+++Y++L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 198 NAYGKARREEEALAVFEEM 216
+ + E+AL VF+ M
Sbjct: 478 DGLCNNGKLEKALEVFDYM 496
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K + ++A + M G PNVV++++L+ GR+++A + M
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +T+ ++ FV+ KF EAE++++ ++ + + PD ++ ++ + +
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMI---KRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQMQRSGLQPDVVSYALLI 197
KA++MF M ++ VTYN+L+ K V ++++ +M GL D V+Y LI
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ A VF++M+ GV
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+G F EAEK+ M K P++ ++ +L+ + R + A+ +F M +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++K F + + ++ E+F + L D + +I G+ +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+K+F M +P +TY+ L+ N ++ K ++D MQ+S ++ D+ Y +I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
KA + ++ +F + GV
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGV 536
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ + A +L M K+GY P++V+ ++L+ Y G R ++A A+ +M +G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +T+ ++ NK EA + + ++ + +P+ + +++ K G+ +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMV---QRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A + + M +I V +N+++ Y+ V ++ +M+ G++P+VV+Y+ LI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ R +A + +M++
Sbjct: 303 SCLCSYGRWSDASQLLSDMIE 323
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K+G+ + A +L M +VV ++++ + ++A +F+ M+T G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ ++ +A ++ ++ + + P+ F+ +I + K G +
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPNLVTFNALIDAFVKEGKFV 347
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A K++ M +R I TYNSL++ + + K +++ M PDVV+Y LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ K++R E+ +F EM G+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGL 431
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 106/199 (53%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ G +++A ++L+ M + PN+V+ AL++A+ + G++ AE + M
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P TY ++ F ++ +A+++FE ++S + PD ++ +I + K+ E
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD---CFPDLDTYNTLIKGFCKSKRVE 341
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
++F M+ R + TVTY +L+ + + K++ QM G+ PD+++Y++L+
Sbjct: 342 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401
Query: 198 NAYGKARREEEALAVFEEM 216
+ + E+AL VF+ M
Sbjct: 402 DGLCNNGKLEKALEVFDYM 420
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K + ++A + M G PNVV++++L+ GR+++A + M
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +T+ ++ FV+ KF EAE++ + ++ + + PD ++ +I + +
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMI---KRSIDPDIFTYNSLINGFCMHDRLD 306
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQMQRSGLQPDVVSYALLI 197
KA++MF M ++ TYN+L+ K V ++++ +M GL D V+Y LI
Sbjct: 307 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 366
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ A VF++M+ GV
Sbjct: 367 QGLFHDGDCDNAQKVFKQMVSDGV 390
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 13 FSEMDSIR-LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
F ++D+ LI K + ++ M+ G + V++T L++ G +NA+
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+F++M + G P +TY I+L K ++A EVF+ + +++ +K D ++ MI
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM---QKSEIKLDIYIYTTMIE 437
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIY---DQMQRSGLQP 188
KAG + +F ++ + + + VTYN+++S + + + + Y +M+ G P
Sbjct: 438 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 497
Query: 189 DVVSYALLINAYGKARREEEALAVFEEM 216
D +Y LI A+ + + + + EM
Sbjct: 498 DSGTYNTLIRAHLRDGDKAASAELIREM 525
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+G F EAEK+ M K P++ ++ +L+ + R + A+ +F M +
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY ++K F + + ++ E+F + L D + +I G+ +
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGLFHDGDCD 376
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+K+F M +P +TY+ L+ N ++ K ++D MQ+S ++ D+ Y +I
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
KA + ++ +F + GV
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGV 460
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 20 RLITAHGKQGNFNE--AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ 77
+L++A K F+ + +L M K+GY P++V+ ++L+ Y G R ++A A+ +M
Sbjct: 47 KLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 106
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
+G P +T+ ++ NK EA + + ++ + +P+ + +++ K G
Sbjct: 107 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV---QRGCQPNLVTYGVVVNGLCKRG 163
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYA 194
+ + A + + M +I V +N+++ Y+ V ++ +M+ G++P+VV+Y+
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 223
Query: 195 LLINAYGKARREEEALAVFEEMLD 218
LI+ R +A + +M++
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIE 247
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K+G+ + A +L M +VV ++++ + ++A +F+ M+T G
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ ++ +A ++ ++ + + P+ F+ +I + K G +
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPNLVTFNALIDAFVKEGKFV 271
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A K+ M +R I TYNSL++ + + K +++ M PD+ +Y LI
Sbjct: 272 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ K++R E+ +F EM G+
Sbjct: 332 KGFCKSKRVEDGTELFREMSHRGL 355
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K A + +M K G PN+ + L+ + + G A + M++L
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY I++ ++ EA +F+ + +ER + P ++ +I+ Y K N E
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKM-KNER--IFPSSATYNSLIHGYCKEYNME 426
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A + S MT + + +T+++L+ N +++ +Y +M G+ PDVV+Y LI
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+A+ K +EAL ++ +ML+AG+
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGI 510
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
KQG +++ EK+L M +G PNV +T + R + AE +F M+ G P+
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++ + + ++A +++ +L E L P+ +F ++ + KA AR +F
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAE---LLPNVVVFGTLVDGFCKARELVTARSLF 327
Query: 147 SLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
M + + + YN L+ N E + +M+ L PDV +Y +LIN
Sbjct: 328 VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIE 387
Query: 204 RREEEALAVFEEM 216
+ EA +F++M
Sbjct: 388 DQVAEANRLFQKM 400
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 45 GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEA 104
G P+V + L + + G Y+ E + M +LG +P+ Y I + NK +EA
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 105 EEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL 164
E++FE + ++ + P+ + MI Y K GN +A ++ + E+ + V + +L
Sbjct: 254 EKMFELM---KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 165 MSFETNYKEV---SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
+ +E+ ++ M + G+ P++ Y LI+ + K+ EA+ + EM
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K+ N +A + + M G PN+++ + L++ Y A ++ M G
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ + KEA ++ +L A + P+ F ++ + K G
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDML---EAGIHPNDHTFACLVDGFWKEGRLS 531
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETNY-KEVSKIYDQMQRSGLQPDVVSYALLI 197
A + Q+ + V + L+ + Y S+ + M+ G+ PD+ SY ++
Sbjct: 532 VAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + +R + + + +M+ G+
Sbjct: 592 KGHLQEKRITDTMMLQCDMIKTGI 615
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 115/215 (53%), Gaps = 16/215 (7%)
Query: 13 FSEMDS--IR--------LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGR 62
F+EMD+ IR LI+ G +++A ++L+ M + PNVV+ +L++A+ +
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 63 GGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD 122
G+ AE +F M +P+ +TY ++ F ++ EA+++F ++S + PD
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD---CLPD 379
Query: 123 QKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FE-TNYKEVSKIYD 179
++ +I + KA ++F M++R + +TVTY +L+ F+ ++ ++
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 180 QMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
QM G+ P++++Y L++ K + E+A+ VFE
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 108/204 (52%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K + ++A + T M+ G P+V ++++L+ GR+++A + M
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +T+ ++ F + K EAE++F+ ++ + + P+ ++ +I + +
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI---QRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+A+++F+LM ++ VTYN+L++ K+V +++ M R GL + V+Y LI
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + +A + A VF++M+ GV
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGV 446
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+G EAEK+ M + PN+V++ +L+ + R + A+ IF M +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ F + K + E+F + R L + + +I+ + +A + +
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDM---SRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+ +F M + + +TYN+L+ ++ K +++ +Q+S ++PD+ +Y ++
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
KA + E+ +F + GV
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGV 516
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I ++ + A IL M K+GY P++V+ +L+ + G R + A A+ +M +G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +T+ ++ + NK EA + E ++ +PD + +I K G +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVV---KGCQPDLVTYGAVINGLCKRGEPD 222
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A + + M + +I V Y++++ Y+ V ++ +M G++PDV +Y+ LI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ R +A + +ML+
Sbjct: 283 SCLCNYGRWSDASRLLSDMLE 303
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K + ++ M++ G N V++T L+ + + +NA+ +F++M + G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY +L + K ++A VFE L +++ ++PD +++M KAG E
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL---QKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVS-KIYDQMQRSGLQPDVVSYALLI 197
+F ++ + + + YN+++S + KE + ++ +M+ G PD +Y LI
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 198 NAYGKARREEEALAVFEEM 216
A+ + + + + +EM
Sbjct: 563 RAHLRDGDKAASAELIKEM 581
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 44/242 (18%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRY--NNAEAIFRRMQT 78
++ + + G F++A++++ M + G P+++S L+ A + G N A + ++
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G P A+TY +L + A +VFE + E +PD ++ MI +Y + G
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM---EAHRCQPDLWTYNAMISVYGRCGL 347
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQR------------ 183
+A ++F + + VTYNSL+ + E N ++V ++Y QMQ+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 184 ------------------------SGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 219
SG PD ++Y +LI++ GKA R EA A+ EMLD
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 220 GV 221
G+
Sbjct: 468 GI 469
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A+GKQ + +AE ++ + + G P++ + +LM AY + G Y A AIF M G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPL----------------------------- 111
P P+ + I+L + +E V E L
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 112 ---LSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
S + A P +++ MMI + K A M S M + +NS++
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 169 T---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
T +YK+ ++Y +++ +GL+PD +Y LI Y + RR EE + ++M + G+
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 30 NFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
++ + ++ + + G P+ ++ L+ Y R R + ++M+ LG +P TY+
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
++ F + ++AE++FE LLS LK D+ +H M+ + R +G+ KA K+ +M
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLS---KGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Query: 150 TQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARRE 206
I + T + LM S N +E K+ ++ + ++ + Y+ +I+AY +++
Sbjct: 1059 KNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDY 1118
Query: 207 EEALAVFEEMLDAGV 221
+ EM G+
Sbjct: 1119 NSGIERLLEMKKEGL 1133
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 92/201 (45%), Gaps = 36/201 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL- 79
L+ A ++ N + +++ M KMG+ + +++ ++ YG+ G+ + A +++ M+ L
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P A+TY +++ + + N+ EA + +L +KP + + +I Y KAG
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD---VGIKPTLQTYSALICGYAKAGKR 489
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
E+A FS M RSG +PD ++Y+++++
Sbjct: 490 EEAEDTFSCML--------------------------------RSGTKPDNLAYSVMLDV 517
Query: 200 YGKARREEEALAVFEEMLDAG 220
+ +A ++ +M+ G
Sbjct: 518 LLRGNETRKAWGLYRDMISDG 538
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 35/201 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ A + GN E +KI + M GY P + + ++E +G R +AE + M+
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + +LK + +K+ +V++ + + L+PD+ ++ +I MY + E
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRI---KETGLEPDETTYNTLIIMYCRDRRPE 979
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
+ + LM QM+ GL P + +Y LI+A+
Sbjct: 980 EG---YLLM-----------------------------QQMRNLGLDPKLDTYKSLISAF 1007
Query: 201 GKARREEEALAVFEEMLDAGV 221
GK + E+A +FEE+L G+
Sbjct: 1008 GKQKCLEQAEQLFEELLSKGL 1028
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 90/187 (48%), Gaps = 8/187 (4%)
Query: 15 EMDSIRLITAHGKQGNFNEAEKILTYMNKM-GYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
EM +I +GKQG + A ++ M + G P+ +++T L+++ G+ R A A+
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
M +G +P+ TY ++ + + K +EAE+ F +L R+ KPD + +M+ +
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML---RSGTKPDNLAYSVMLDVL 518
Query: 134 RKAGNYEKARKMF-SLMTQREIPHSTVTYNSLMSF--ETNYKEVSK-IYDQMQRSGLQPD 189
+ KA ++ +++ P T+ ++ E ++ K I D + G+ P
Sbjct: 519 LRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPL 578
Query: 190 VVSYALL 196
+S L+
Sbjct: 579 EISSVLV 585
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI H K G AE++ M + G P ++ ++ +YG R+++ + + +M++ G
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +T+ ++ + + +F +A E E + S LKP M++ +I Y + G E
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS---VGLKPSSTMYNALINAYAQRGLSE 601
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM-SFETNYK--EVSKIYDQMQRSGLQPDVVSYALLI 197
+A F +MT + S + NSL+ +F + + E + M+ +G++PDVV+Y L+
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
A + + ++ V+EEM+ +G
Sbjct: 662 KALIRVDKFQKVPVVYEEMIMSGC 685
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 113/239 (47%), Gaps = 41/239 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ--- 77
L+ + K G +AE +++ M K G +P+ +++ L++AY GR+ +A + + M+
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 78 --------------------------------TLGPEPSALTYQIILKTFVEGNKFKEAE 105
++G +P Y +++ TF + N A
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 106 EVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
F+ +LS+ ++PD+ ++ +I + K G + A +MF M +R TYN ++
Sbjct: 465 TTFDRMLSE---GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 166 SF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ + + ++ ++ +M+ G+ P+VV++ L++ YGK+ R +A+ EEM G+
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I ++G Q +++ +++L M G PNVV+HT L++ YG+ GR+N+A M+++G
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+PS+ Y ++ + + ++A F + SD LKP + +I + +
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD---GLKPSLLALNSLINAFGEDRRDA 636
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A + M + + VTY +LM +++V +Y++M SG +PD + ++L
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLR 696
Query: 198 NA 199
+A
Sbjct: 697 SA 698
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K G+ ++A ++L G + + +++ A GR AEA+F ++ G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P Y +LK +V+ K+AE + + E+ + PD+ + ++I Y AG +E
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEM---EKRGVSPDEHTYSLLIDAYVNAGRWE 391
Query: 141 KARKMFSLMTQREI-PHSTVTYNSLMSFETN--YKEVSKIYDQMQRSGLQPDVVSYALLI 197
AR + M ++ P+S V L F +++ ++ +M+ G++PD Y ++I
Sbjct: 392 SARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ +GK + A+ F+ ML G+
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGI 475
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
RL+ +G + + ++L M +G P+ + +++ +G+ ++A F RM +
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G EP +T+ ++ + + AEE+FE + ER P +++MI Y +
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM---ERRGCLPCATTYNIMINSYGDQERW 530
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+ +++ M + I + VT+ +L+ + + + ++M+ GL+P Y L
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
INAY + E+A+ F M G+
Sbjct: 591 INAYAQRGLSEQAVNAFRVMTSDGL 615
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + G AEK + M G +P+V ++ L+ YGR ++ I + M+ G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ ++Y ++ +G+K EA+ V + E + P ++++M+I G E
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDM---EDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A + M ++ I + VTYN+L +S E + ++ R GL+PDV +Y LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ YG A + +A++EEM +G+
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGI 630
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +EAE +L +++ G P+V ++ +L+ YG G A++ M+ G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ TY +++ KE E+ E L + LKPD +++ +++ Y G+ E
Sbjct: 630 IKPTLKTYHLLISLCT-----KEGIELTERLFGE--MSLKPDLLVYNGVLHCYAVHGDME 682
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLI 197
KA + M ++ I TYNSL+ + EV + D+M ++P+ +Y +++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ + + A + EM + G
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKG 765
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 99/239 (41%), Gaps = 43/239 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K GN ++ K+ M P++++ L++ + G +AE + + M+ LG
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEP------------------------------ 110
P A T+ I+ + K + A V+E
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 111 -LLSDERAP-LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM--- 165
+L E A L P++ +++ MI Y + G+ AR M ++ + + YN L+
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 166 ----SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
E KEV+K M+ G+ P V +Y +LI YG+ ++ + +EM D G
Sbjct: 435 CELGEMENAEKEVNK----MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 78/204 (38%), Gaps = 41/204 (20%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K+G +AE+IL G PN V + +++ Y R G A M+ G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P L Y +++ F E G E
Sbjct: 420 MKPDHLAYNCLIRRFCE--------------------------------------LGEME 441
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
A K + M + + S TYN L+ E K +D +M+ +G P+VVSY LI
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N K + EA V +M D GV
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGV 525
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 44/197 (22%)
Query: 31 FNEAEKILTYMNKMGYA---PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
++ K L N+M + P+V + L++ +G R N+AE +F M PS +T
Sbjct: 192 LSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y T ++G Y KAGN EK+ K+
Sbjct: 252 YN----TLIDG----------------------------------YCKAGNPEKSFKVRE 273
Query: 148 LMTQREIPHSTVTYNSLMS--FETN-YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
M I S +T+N+L+ F+ ++ + +M+ G PD ++++L + Y
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 205 REEEALAVFEEMLDAGV 221
+ E AL V+E +D+GV
Sbjct: 334 KAEAALGVYETAVDSGV 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K N+AE++ M P+++++ L++ Y + G + + RM+
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EPS +T+ +LK + ++AE V + + + PD F ++ Y E
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEM---KDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQR---SGLQPDVVSYALLI 197
A ++ + + T + L++ ++ K + + R GL P+ V Y +I
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 198 NAYGK 202
+ Y +
Sbjct: 397 DGYCR 401
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 69 AEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHM 128
A +F ++ G PS+ + ++L V+ +F+ VF +L + +P + M+
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD---FRPSKFMYGK 184
Query: 129 MIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSG 185
I K + K ++F+ M I S YN L+ K + +++D+M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 186 LQPDVVSYALLINAYGKARREEEALAVFEEM 216
L P +++Y LI+ Y KA E++ V E M
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
AE ++ + + G + V++ L+ Y + G A A+ M T G +P+ TY ++
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
NK +EA+E+FE ++ +KPD M + ++ + GN ++A + M
Sbjct: 441 VLCRKNKTREADELFEKVVG---KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 154 IPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
I VTYN LM E ++E ++ +M+R G++PD +SY LI+ Y K + A
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 211 AVFEEMLDAG 220
V +EML G
Sbjct: 558 MVRDEMLSLG 567
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 3/190 (1%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
+EA + M + G+ P + ++ R R NA + M + + + T+ I+
Sbjct: 172 DEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 231
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
+ + K K+A+ + E +KP ++ ++ + G E AR + S M
Sbjct: 232 INVLCKEGKLKKAKGFLGIM---EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 152 REIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALA 211
+ TYN ++S+ N S++ +M+ GL PD VSY +LI E A A
Sbjct: 289 KGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 212 VFEEMLDAGV 221
+EM+ G+
Sbjct: 349 YRDEMVKQGM 358
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 6/182 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ EA+++ + G P++V LM+ + G + A ++ + M +
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY +++ KF+EA E+ + +R +KPD ++ +I Y K G+ +
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEM---KRRGIKPDHISYNTLISGYSKKGDTK 554
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKE---VSKIYDQMQRSGLQPDVVSYALLI 197
A + M + +TYN+L+ + +E ++ +M+ G+ P+ S+ +I
Sbjct: 555 HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Query: 198 NA 199
A
Sbjct: 615 EA 616
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 96/239 (40%), Gaps = 44/239 (18%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K+G +A+ L M G P +V++ L++ + GR A I M++ G
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI---------- 130
+P TY IL + A EV + + L PD ++++I
Sbjct: 291 FQPDMQTYNPILSWMCNEGR---ASEVLREM---KEIGLVPDSVSYNILIRGCSNNGDLE 344
Query: 131 --YMYR----KAG-------------------NYEKARKMFSLMTQREIPHSTVTYNSLM 165
+ YR K G E A + + ++ I +VTYN L+
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILI 404
Query: 166 SFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ + + K ++D+M G+QP +Y LI + + EA +FE+++ G+
Sbjct: 405 NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
I+ + + F A+K + M + G PN V T L+ Y + G+ A + +R M G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
A TY +++ + +K +AEE+F + A PD + ++I + K GN +
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA---PDVFSYGVLINGFSKLGNMQ 644
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
KA +F M + + + + YN L+ E+ K + D+M GL P+ V+Y +I
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 198 NAYGKARREEEALAVFEEM 216
+ Y K+ EA +F+EM
Sbjct: 705 DGYCKSGDLAEAFRLFDEM 723
Score = 84.3 bits (207), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + F +A ++L M + G AP++ + +L+ + R + A + M G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+A TY + ++E ++F A++ + + + P++ + +I Y K G
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETN-YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A + M + I TY LM+ F+ + + +I+ +M+ G+ PDV SY +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N + K ++A ++F+EM++ G+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGL 658
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 46/243 (18%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K GN +A I M + G PNV+ + L+ + R G A+ + M G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A+TY I+ + + EA +F+ + + L PD ++ ++ + + E
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM---KLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF--------------------------------- 167
+A +F ++ ST +N+L+++
Sbjct: 750 RAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 168 ---------ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
E N + +++ QMQ + L P V++Y L+N Y K R E VF+E +
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 219 AGV 221
AG+
Sbjct: 869 AGI 871
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/196 (23%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K+G EA M G + ++T LM + + ++AE IFR M+ G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +Y +++ F + ++A +F+ ++ + L P+ +++M++ + ++G E
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIE 679
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA+++ M+ + + + VTY +++ + E +++D+M+ GL PD Y L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 198 NAYGKARREEEALAVF 213
+ + E A+ +F
Sbjct: 740 DGCCRLNDVERAITIF 755
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + G +A+++L M+ G PN V++ +++ Y + G A +F M+ G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVF---EPLLSDERAPL------------------ 119
P + Y ++ N + A +F + + AP
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 120 --------------KPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
KP+ +++MI K GN E A+++F M + + +TY SL+
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 166 SFETNY---KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+ E+ ++D+ +G++PD + Y+++INA+ K +AL + ++M
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K ++AE+I M G AP+V S+ L+ + + G A +IF M G P+ +
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
Y ++L F + ++A+E+ + + L P+ + +I Y K+G+ +A ++F
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEM---SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD--QMQRSGLQPDVVSYALLINAYGKAR 204
M + + + Y +L+ +V + + G + LIN K
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 205 REEEALAVFEEMLDA 219
+ E V ++D
Sbjct: 781 KTELKTEVLNRLMDG 795
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/204 (20%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K +A+ +L M+ +G + + +++ L++ +G + A+ + M + G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
Y + + ++A+ +F+ +++ + L P + + +I Y + N
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIA---SGLIPQAQAYASLIEGYCREKNVR 399
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
+ ++ M +R I S TY +++ + ++ Y+ +M SG +P+VV Y LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + R +A+ V +EM + G+
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGI 483
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 107/210 (50%), Gaps = 12/210 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +++ K+L M K PNVV+ + L++++ + G+ AE + + M G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ F + N +A ++ + ++S P+ + F+++I Y KA +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVS---KGCDPNIRTFNILINGYCKANRID 420
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVSK-IYDQMQRSGLQPDVVSYALLI 197
++F M+ R + TVTYN+L+ E V+K ++ +M + P++V+Y +L+
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 198 NAYGKARREEEALAVFEEM------LDAGV 221
+ E+AL +FE++ LD G+
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 104/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K+G EAE++ M G AP+ +++T+L++ + + + A + M + G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ T+ I++ + + N+ + E+F + + D ++ +I + + G
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKM---SLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+++F M R++P + VTY L+ + E K I++++++S ++ D+ Y ++I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ A + ++A +F + GV
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGV 539
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K G A ++L M + + V ++ +++ + G +NA +F M+ G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY I++ F ++ + ++ ++ + + P+ F ++I + K G
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMI---KRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ M R I T+TY SL+ E + + +++ D M G P++ ++ +LI
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N Y KA R ++ L +F +M GV
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGV 434
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 103/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +G +EA +++ M +MG+ P++++ L+ G+ A + +M G
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+A+TY +L + + A E+ + E +K D + ++I K G+ +
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
A +F+ M + I + +TYN L+ N + + +K+ M + + P+VV++++LI
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+++ K + EA + +EM+ G+
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGI 364
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+ + ++A +++ M G PN+ + L+ Y + R ++ +FR+M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+TY +++ F E K A+E+F+ ++S + P P+ + +++ G E
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVS-RKVP--PNIVTYKILLDGLCDNGESE 490
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
KA ++F + + ++ YN ++ N +V +D + G++P V +Y ++I
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
K EA +F +M + G
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDG 573
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K ++ ++ M+ G + V++ L++ + G+ N A+ +F+ M +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY+I+L + + ++A E+FE + E++ ++ D +++++I+ A +
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKI---EKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A +F + + + TYN ++ +S+ ++ +M+ G PD +Y +LI
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
A+ +++ + EE+ G
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCG 608
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 28 QGNFNEAEKILTYM-NKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPE-PSA 85
G N + K+L Y + +G PN L++ + + G N A + M+ G P++
Sbjct: 173 SGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNS 232
Query: 86 LTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
+TY ++ ++ KEA E+FE ++S E + PD F++MI + +AG E+A+K+
Sbjct: 233 ITYSTLMDCLFAHSRSKEAVELFEDMISKE--GISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 146 FSLMTQREIPHSTVTYNSLMSFETNYKEVSKI------YDQMQRSGLQPDVVSYALLINA 199
M + + Y++LM+ + +V KI +D+++++GL+ D V Y L+N
Sbjct: 291 LDFMKKNGCNPNVYNYSALMN---GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 200 YGKARREEEALAVFEEM 216
+ + +EA+ + EM
Sbjct: 348 FCRNGETDEAMKLLGEM 364
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K G EA++ + K G + V +T LM + R G + A + M+
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
LTY +IL+ + +EA ++ + S+ + ++ + +++ G E
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE---GVHLNKGSYRIILNALCCNGELE 425
Query: 141 KARKMFSLMTQREI-PHSTVTYNSLMS--FETNYKEVS-KIYDQMQRSGLQPDVVSYALL 196
KA K S+M++R I PH T+N L+ E+ Y E+ ++ R GL P S+ +
Sbjct: 426 KAVKFLSVMSERGIWPHHA-TWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAV 484
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
+ + K R+ + VF E+LD+ V
Sbjct: 485 VESICKERK---LVHVF-ELLDSLV 505
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 110/200 (55%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA-IFRRMQTL 79
L+ A+ ++ + E +L M +G PNV S+T L+ AYGR + ++ A F RM+ +
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV 479
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G +PS+ +Y ++ + ++A FE + + +KP + + ++ +R++G+
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC---KEGIKPSVETYTSVLDAFRRSGDT 536
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
K +++ LM + +I + +TYN+L+ + + Y E + + + GLQP V++Y +L
Sbjct: 537 GKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Query: 197 INAYGKARREEEALAVFEEM 216
+NAY + ++ + + +EM
Sbjct: 597 MNAYARGGQDAKLPQLLKEM 616
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNE-AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
LI+A+G+ ++ A M K+G P+ S+TAL+ AY G + A A F M
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE 514
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G +PS TY +L F + E+++ +L R +K + ++ ++ + K G Y
Sbjct: 515 GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLML---REKIKGTRITYNTLLDGFAKQGLY 571
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKI---YDQMQRSGLQPDVVSYALL 196
+AR + S ++ + S +TYN LM+ + +K+ +M L+PD ++Y+ +
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
I A+ + R + A + M+ +G
Sbjct: 632 IYAFVRVRDFKRAFFYHKMMVKSG 655
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 36/202 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + +G EA I T M K G N + + LM+AY + E +F M+ G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD-ERAPLKPDQKMFHMMIYMYRKAGNY 139
+PSA TY I++ + + ++ E LL + E L+P+ K + +I Y
Sbjct: 410 LKPSAATYNILMDAYAR----RMQPDIVETLLREMEDLGLEPNVKSYTCLI------SAY 459
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
+ +KM + + + +M++ GL+P SY LI+A
Sbjct: 460 GRTKKMSDM-------------------------AADAFLRMKKVGLKPSSHSYTALIHA 494
Query: 200 YGKARREEEALAVFEEMLDAGV 221
Y + E+A A FEEM G+
Sbjct: 495 YSVSGWHEKAYASFEEMCKEGI 516
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 12/182 (6%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL----TYQIILKTFVEGNKFKE 103
P++ S A + GR A+ I + L P+ Y + ++ +
Sbjct: 233 PSLASPRACSVLFTLLGRERMADYILLLLSNL-PDKEEFRDVRLYNAAISGLSASQRYDD 291
Query: 104 AEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK-ARKMFSLMTQREIPHSTVTYN 162
A EV+E + ++ + PD ++I RKAG K ++F M+++ + S +
Sbjct: 292 AWEVYEAM---DKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFG 348
Query: 163 SLM-SF--ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 219
L+ SF E +E I +M++ G++ + + Y L++AY K+ EE +F EM D
Sbjct: 349 GLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK 408
Query: 220 GV 221
G+
Sbjct: 409 GL 410
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 89.0 bits (219), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 114/215 (53%), Gaps = 16/215 (7%)
Query: 13 FSEMDS--IR--------LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGR 62
F+EMD+ IR LI+ G +++A ++L+ M + PNVV+ +AL++A+ +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 63 GGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD 122
G+ AE ++ M +P TY ++ F ++ EA+ +FE ++S + P+
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD---CFPN 397
Query: 123 QKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FET-NYKEVSKIYD 179
+ +I + KA E+ ++F M+QR + +TVTY +L+ F+ + ++
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 180 QMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
QM G+ P++++Y +L++ K + +A+ VFE
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ G +++A ++L+ M + PN+V+ +AL++A+ + G+ AE ++ M
Sbjct: 899 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 958
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ TY ++ F ++ EA+++ E ++ R P+ ++ +I + KA +
Sbjct: 959 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMI---RKDCLPNVVTYNTLINGFCKAKRVD 1015
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FET-NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K ++F M+QR + +TVTY +L+ F+ + ++ QM G+ P++++Y +L+
Sbjct: 1016 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 1075
Query: 198 NAYGKARREEEALAVFE 214
+ K + +A+ VFE
Sbjct: 1076 DGLCKNGKLAKAMVVFE 1092
Score = 84.3 bits (207), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 103/193 (53%), Gaps = 6/193 (3%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
++A + T M G PNV+++++L+ GR+++A + M P+ +T+ +
Sbjct: 875 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 934
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
+ FV+ K +AE+++E ++ + + P+ + +I + +A++M LM +
Sbjct: 935 IDAFVKKGKLVKAEKLYEEMI---KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 991
Query: 152 REIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
++ + VTYN+L++ K V K ++ +M + GL + V+Y LI+ + +AR +
Sbjct: 992 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 1051
Query: 209 ALAVFEEMLDAGV 221
A VF++M+ GV
Sbjct: 1052 AQMVFKQMVSVGV 1064
Score = 84.0 bits (206), Expect = 6e-17, Method: Composition-based stats.
Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K E ++ M++ G N V++T L+ + + +NA+ +F++M ++G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ LTY I+L + K +A VFE L +R+ ++PD +++MI KAG E
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYL---QRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
++F ++ + + + + YN+++S + + +E + +M+ G P+ +Y LI
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
A + E + + +EM G
Sbjct: 581 RARLRDGDREASAELIKEMRSCG 603
Score = 83.6 bits (205), Expect = 9e-17, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 104/198 (52%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K + ++A + T M+ G P+V ++++L+ GR+++A + M P+ +
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T+ ++ FV+ K EAE++++ ++ + + PD + +I + ++A+ MF
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKA 203
LM ++ + VTY++L+ K V +++ +M + GL + V+Y LI+ + +A
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 204 RREEEALAVFEEMLDAGV 221
R + A VF++M+ GV
Sbjct: 447 RDCDNAQMVFKQMVSVGV 464
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 10/200 (5%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K+G+ + A +L M NVV ++ ++++ + ++A +F M+ G P+ +
Sbjct: 835 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 894
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSD--ERAPLKPDQKMFHMMIYMYRKAGNYEKARK 144
TY ++ ++ +A LLSD ER + P+ F +I + K G KA K
Sbjct: 895 TYSSLISCLCNYGRWSDASR----LLSDMIERK-INPNLVTFSALIDAFVKKGKLVKAEK 949
Query: 145 MFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYG 201
++ M +R I + TY+SL++ E ++ + M R P+VV+Y LIN +
Sbjct: 950 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 1009
Query: 202 KARREEEALAVFEEMLDAGV 221
KA+R ++ + +F EM G+
Sbjct: 1010 KAKRVDKGMELFREMSQRGL 1029
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
I ++ + A +L M K+GY P++V+ ++L+ Y R ++A A+ +M +G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P T+ ++ NK EA + + ++ + +PD + ++ K G+ +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMV---QRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A + M + +I V YN+++ YK + ++ +M G++PDV +Y+ LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ R +A + +M++
Sbjct: 301 SCLCNYGRWSDASRLLSDMIE 321
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + ++A ++ M +MGY P+ + T L+ + + A A+ +M G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 81 PEPSALTYQ-------------------------------IILKTFVEG-NKFKEAEEVF 108
+P +TY +I T ++G K+K ++
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF- 167
+ ++PD + +I G + A ++ S M +R+I + VT+++L+
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 168 --ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
E E K+YD+M + + PD+ +Y+ LIN + R +EA +FE M+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M K+GY P++V+ +L+ + G R ++A A+ +M +G +P +T+ ++ NK
Sbjct: 744 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 803
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
EA + + ++ + +PD + ++ K G+ + A + + M +I + V
Sbjct: 804 ASEAVALIDRMV---QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 860
Query: 161 YNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
Y++++ Y+ + ++ +M+ G++P+V++Y+ LI+ R +A + +M+
Sbjct: 861 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 920
Query: 218 D 218
+
Sbjct: 921 E 921
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+L++A K F+ M +G + N+ ++ L+ + R R + A A+ +M L
Sbjct: 688 KLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKL 747
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI---YMYRKA 136
G EP +T +L F GN+ +A + + ++ KPD F +I +++ KA
Sbjct: 748 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV---EMGYKPDTVTFTTLIHGLFLHNKA 804
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSY 193
+A + M QR VTY ++++ + + ++M+ + ++ +VV Y
Sbjct: 805 ---SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 861
Query: 194 ALLINAYGKARREEEALAVFEEMLDAGV 221
+ +I++ K R E++AL +F EM + GV
Sbjct: 862 STVIDSLCKYRHEDDALNLFTEMENKGV 889
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K ++ ++ M++ G N V++T L+ + + +NA+ +F++M ++G
Sbjct: 1004 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 1063
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ LTY I+L + K +A VFE L +R+ ++PD +++MI KAG ++
Sbjct: 1064 VHPNILTYNILLDGLCKNGKLAKAMVVFEYL---QRSTMEPDIYTYNIMIEGMCKAGKWK 1120
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 6/172 (3%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P++V L+ A + ++ ++ +MQTLG TY I + F ++ A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
++ + +PD ++ Y + A + M + T T+ +L+
Sbjct: 141 LAKMM---KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 167 --FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
E + DQM + G QPD+V+Y ++N K + AL++ ++M
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + N EA +I M G P++V+H ++E R + ++A +F M++ G
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P P+ +Y I+++ F + + + A E F+ ++ + L+PD ++ +I + +
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD---SGLQPDAAVYTCLITGFGTQKKLD 420
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLI 197
++ M ++ P TYN+L+ N K ++IY++M ++ ++P + ++ +++
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM 480
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+Y AR E AV+EEM+ G+
Sbjct: 481 KSYFMARNYEMGRAVWEEMIKKGI 504
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K+G NE + M + G PNV +T L++ Y + G +A + RM G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +TY +++ + + +EA + F D L + + +I KAG +
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD---GLAINSMFYSSLIDGLGKAGRVD 449
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQR----SGLQPDVVSYALL 196
+A ++F M+++ + YN+L+ T +++V + +R G V +Y +L
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
++ K R EEAL +++ M+D G+
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKGI 534
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 6/220 (2%)
Query: 4 WLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG 63
W R Q + + + L+ + + + + + K + V + AL++++G+
Sbjct: 141 WSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKL 200
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
G ++R+M+ G EP+ TY ++ V AE VFE + E +KPD
Sbjct: 201 GMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM---ESGRIKPDI 257
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQ 180
++ MI Y KAG +KA + M R +TY +++ ++++ +Y +
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
M G+Q +++L+I K + E VFE M+ G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G+ +A ++L M G+ P+VV+++ ++ + GR A F + G
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+++ Y ++ + + EAE +FE + E+ + D ++ +I + K +
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEM--SEKGCTR-DSYCYNALIDAFTKHRKVD 484
Query: 141 KARKMFSLMTQREIPHSTV-TYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+A +F M + E TV TY L+S E +E K++D M G+ P + L
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
+ + A + +E+ GV
Sbjct: 545 STGLCLSGKVARACKILDELAPMGV 569
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 110/197 (55%), Gaps = 6/197 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ G +++A ++L+ M + P+V + +AL++A+ + G+ AE ++ M
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+PS +TY ++ F ++ EA+++FE ++S PD ++ +I + K E
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGFCKYKRVE 413
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVSK-IYDQMQRSGLQPDVVSYALLI 197
+ ++F M+QR + +TVTYN L+ F+ ++++ I+ +M G+ P++++Y L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 198 NAYGKARREEEALAVFE 214
+ K + E+A+ VFE
Sbjct: 474 DGLCKNGKLEKAMVVFE 490
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K+G+ + A +L M + P V+ + +++ + ++A +F+ M+T G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD--ERAPLKPDQKMFHMMIYMYRKAGN 138
P+ +TY ++ ++ +A LLSD ER + PD F +I + K G
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASR----LLSDMIER-KINPDVFTFSALIDAFVKEGK 341
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
+A K++ M +R I S VTY+SL+ E ++++ M PDVV+Y
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
LI + K +R EE + VF EM G+
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGL 427
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+G EAEK+ M K P++V++++L+ + R + A+ +F M +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++K F + + +E EVF + + L + ++++I +AG+ +
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREM---SQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+++F M +P + +TYN+L+ ++ K +++ +QRS ++P + +Y ++I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
KA + E+ +F + GV
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGV 532
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K + ++A + M G PNVV++++L+ GR+++A + M
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P T+ ++ FV+ K EAE++++ ++ + + P + +I + +
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMV---KRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+A++MF M + VTYN+L+ YK V +++ +M + GL + V+Y +LI
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+A + A +F+EM+ GV
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ A +L M K+GY PN+V+ ++L+ Y R + A A+ +M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +T+ ++ NK EA + + +++ +PD + +++ K G+ +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA---KGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A + + M Q ++ + YN+++ YK + ++ +M+ G++P+VV+Y+ LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ R +A + +M++
Sbjct: 299 SCLCNYGRWSDASRLLSDMIE 319
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P+++ + L+ A + +++ ++ +MQ LG + TY I++ F ++ A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
++ + +P+ ++ Y + +A + M +TVT+N+L+
Sbjct: 139 LGKMM---KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 167 --FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALA 211
E + D+M G QPD+V+Y +++N G +R + LA
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN--GLCKRGDTDLA 240
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + G +A KIL + G P+V+++ ++ Y + G NNA ++ RM
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV-- 200
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY IL++ + K K+A EV + +L + PD + ++I +
Sbjct: 201 -SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD---CYPDVITYTILIEATCRDSGVG 256
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A K+ M R VTYN L + E E K + M SG QP+V+++ +++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ R +A + +ML G
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKG 339
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ G E K L M G P+++ T L+ + R G+ A I ++ G P +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY +++ + + + A V +R + PD ++ ++ +G ++A ++
Sbjct: 174 TYNVMISGYCKAGEINNALSVL------DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 147 SLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
M QR+ +TY L+ ++ K+ D+M+ G PDVV+Y +L+N K
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 204 RREEEALAVFEEMLDAGV 221
R +EA+ +M +G
Sbjct: 288 GRLDEAIKFLNDMPSSGC 305
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A + A K+L M G P+VV++ L+ + GR + A M + G
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +T+ IIL++ ++ +AE++ +L R P F+++I + G
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADML---RKGFSPSVVTFNILINFLCRKGLLG 361
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQR---SGLQPDVVSYALLI 197
+A + M Q ++++YN L+ K++ + + ++R G PD+V+Y ++
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
A K + E+A+ + ++ G
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGC 445
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G + +AEK+L M + G++P+VV+ L+ R G A I +M G +P++L+Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
+L F + K A E E ++S PD ++ M+ K G E A ++ +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVS---RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 149 MTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARR 205
++ + +TYN+++ + K+ D+M+ L+PD ++Y+ L+ + +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 206 EEEALAVFEEMLDAGV 221
+EA+ F E G+
Sbjct: 500 VDEAIKFFHEFERMGI 515
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++G A IL M + G PN +S+ L+ + + + + A RM + G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY +L + K ++A E+ L S +P+ ++ +I KAG
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV---LITYNTVIDGLAKAGKTG 466
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA K+ M +++ T+TY+SL +S E E K + + +R G++P+ V++ ++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
K+R+ + A+ M++ G
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGC 550
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 7/224 (3%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
ILE + QH + + L+ K+ + A + L M G P++V++ ++ A
Sbjct: 366 ILEKM-PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
+ G+ +A I ++ + G P +TY ++ + K +A ++ + + + + LK
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD---LK 481
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD- 179
PD + ++ + G ++A K F + I + VT+NS+M ++ + D
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Query: 180 --QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
M G +P+ SY +LI +EAL + E+ + G+
Sbjct: 542 LVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 87.4 bits (215), Expect = 6e-18, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
+A ++ M K GY PNVV + L++ + G N A + M+ G +TY +L
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
++ +A + ++ + + PD F +I ++ K GN ++A++++ M Q
Sbjct: 219 TGLCYSGRWSDAARMLRDMM---KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 153 EIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEA 209
+ + VTYNS+++ + K +D M G P+VV+Y LI+ + K R +E
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 210 LAVFEEM 216
+ +F+ M
Sbjct: 336 MKLFQRM 342
Score = 83.6 bits (205), Expect = 9e-17, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K G N A ++L M K G +VV++ L+ GR+++A + R M
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +T+ ++ FV+ EA+E+++ ++ ++ + P+ ++ +I G
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMI---QSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A+K F LM + + VTYN+L+S ++ V K++ +M G D+ +Y LI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 198 NAYGKARREEEALAVF 213
+ Y + + AL +F
Sbjct: 359 HGYCQVGKLRVALDIF 374
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K + N A ++ M K G + V++ L+ GR+ +A + R M +P+ +
Sbjct: 725 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 784
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
+ ++ TFV+ EA +++ ++ R + P+ ++ +I + G A+ MF
Sbjct: 785 FFTALIDTFVKEGNLLEARNLYKEMI---RRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 841
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKA 203
LM + VTYN+L++ K V K++ +M GL D +Y LI+ Y +A
Sbjct: 842 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 901
Query: 204 RREEEALAVFEEMLDAGV 221
+ A VF M+D GV
Sbjct: 902 GKLNVAQKVFNRMVDCGV 919
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 53/214 (24%), Positives = 109/214 (50%), Gaps = 12/214 (5%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKM---GYAPNVVSHTALMEAYGRGGRYNNAE 70
S +D RL+TA N E ++ + KM G + ++ S T L+ + R R + A
Sbjct: 70 SIVDFTRLLTA---TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFAL 126
Query: 71 AIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
++ +M LG EPS +T+ +L F N+ +A F ++ ++ +P+ +++ +I
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA---FSLVILMVKSGYEPNVVVYNTLI 183
Query: 131 YMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQ 187
K G A ++ + M ++ + VTYN+L++ + + + +++ M + +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
PDVV++ LI+ + K +EA +++EM+ + V
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+GN EA + M + PNV ++ +L+ + G +A+ +F M + G
Sbjct: 789 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 848
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ F + + ++ ++F + L D ++ +I+ Y +AG
Sbjct: 849 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG---LVGDAFTYNTLIHGYCQAGKLN 905
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+K+F+ M + VTYN L+ N ++ K + + +Q+S + D+++Y ++I
Sbjct: 906 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 965
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + +EA +F + GV
Sbjct: 966 QGLCRTDKLKEAWCLFRSLTRKGV 989
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ G + +A ++L M K PNV+ TAL++ + + G A +++ M
Sbjct: 754 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 813
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY ++ F +A+ +F+ ++S PD ++ +I + K+ E
Sbjct: 814 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG---CFPDVVTYNTLITGFCKSKRVE 870
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
K+F MT + + TYN+L+ +++ K++++M G+ PD+V+Y +L+
Sbjct: 871 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 930
Query: 198 NAYGKARREEEALAVFEEM 216
+ + E+AL + E++
Sbjct: 931 DCLCNNGKIEKALVMVEDL 949
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 6/211 (2%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
S +D R++T K F+ + M +G + ++ S T L+ + R R + A A+
Sbjct: 607 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 666
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
+M LG PS +T +L F +GN+F+EA + + + + P+ +++ +I
Sbjct: 667 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM---DGFGFVPNVVIYNTVINGL 723
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDV 190
K + A ++F M ++ I VTYN+L+S +N + + +++ M + + P+V
Sbjct: 724 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 783
Query: 191 VSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ + LI+ + K EA +++EM+ V
Sbjct: 784 IFFTALIDTFVKEGNLLEARNLYKEMIRRSV 814
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A +L M K+GY P++V+ +L+ + R +A ++ M G EP+ + Y ++
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
+ + A E+ + E+ L D ++ ++ +G + A +M M +R
Sbjct: 185 GLCKNGELNIALELLNEM---EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 154 IPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
I VT+ +L+ + N E ++Y +M +S + P+ V+Y +IN R +A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 211 AVFEEMLDAG 220
F+ M G
Sbjct: 302 KTFDLMASKG 311
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +A+ + M G P+VV++ L+ + + R + +F M G
Sbjct: 824 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 883
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
A TY ++ + + K A++VF ++ + PD +++++ G E
Sbjct: 884 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD---CGVSPDIVTYNILLDCLCNNGKIE 940
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA M + + E+ +TYN + + KE ++ + R G++PD ++Y +I
Sbjct: 941 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 1000
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ + + EA + M + G
Sbjct: 1001 SGLCRKGLQREADKLCRRMKEDG 1023
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LIT K + K+ M G + ++ L+ Y + G+ N A+ +F RM G
Sbjct: 859 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 918
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY I+L K ++A + E L +++ + D ++++I + +
Sbjct: 919 VSPDIVTYNILLDCLCNNGKIEKALVMVEDL---QKSEMDVDIITYNIIIQGLCRTDKLK 975
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQP 188
+A +F +T++ + + Y +++S + +E K+ +M+ G P
Sbjct: 976 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 1026
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 6/197 (3%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
G +A+K M G PNVV++ L+ + + + +F+RM G T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y ++ + + K + A ++F ++S + PD ++++ G E A F
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRR---VTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 148 LMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQR---SGLQPDVVSYALLINAYGKAR 204
M + E V YN ++ +V K ++ R G++PD +Y ++I K
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 205 REEEALAVFEEMLDAGV 221
EA + M + G+
Sbjct: 471 PRREADELIRRMKEEGI 487
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ A K G + L+ + + G P++V++ L+ AY G A + M G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY ++ + K++ A+EVF +L R+ L PD + ++ K G+
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEML---RSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKI---YDQMQRSGLQPDVVSYALLI 197
+ K+FS M R++ V ++S+MS T + K ++ ++ +GL PD V Y +LI
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
Y + A+ + EML G
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGC 441
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 8/206 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI H K GN A ++ M + +VV++ L++ +G+ G + A+ I+ M +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ ++Y I++ EA V++ ++S +KP + + MI Y ++GN
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN---IKPTVMICNSMIKGYCRSGNAS 602
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQR-----SGLQPDVVSYAL 195
M ++YN+L+ + +SK + +++ GL PDV +Y
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
+++ + + + +EA V +M++ GV
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+A+ +G EA +++ M G++P V ++ ++ + G+Y A+ +F M G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P + TY+ +L + E E+VF + S + + PD F M+ ++ ++GN +
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD---VVPDLVCFSSMMSLFTRSGNLD 392
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
KA F+ + + + V Y L+ +S + ++M + G DVV+Y ++
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 198 NAYGKARREEEALAVFEEM 216
+ K + EA +F EM
Sbjct: 453 HGLCKRKMLGEADKLFNEM 471
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ GN ++A + + G P+ V +T L++ Y R G + A + M G +
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY IL + EA+++F + ERA L PD ++I + K GN + A ++F
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEM--TERA-LFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKA 203
M ++ I VTYN+L+ ++ +I+ M + P +SY++L+NA
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 204 RREEEALAVFEEMLDAGV 221
EA V++EM+ +
Sbjct: 564 GHLAEAFRVWDEMISKNI 581
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A +G+ EA ++ M P V+ ++++ Y R G ++ E+ +M + G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P ++Y ++ FV +A + + + +E+ L PD ++ +++ + + +
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKM-EEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPD 189
+A + M +R + TY +++ + N E +I+D+M + G PD
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
+++ G NV + ++ A + G+ ++Q G P +TY ++ +
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
+EA FE + + P ++ +I K G YE+A+++F+ M + + + T
Sbjct: 286 MEEA---FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 161 YNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
Y SL+ + + E K++ M+ + PD+V ++ +++ + ++ ++AL F +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 218 DAGV 221
+AG+
Sbjct: 403 EAGL 406
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 103/203 (50%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + ++G +EA I M + G+ +V + + + R RY+ A+ RM G
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ S ++Y ++ + + +EA+ +F + S ++P+ +++MIY Y K G +
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS---KGVQPNAITYNVMIYAYCKQGKIK 521
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ARK+ + M + + TY SL+ E N E +++ +M GL + V+Y ++I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ KA + +EA +++EM G
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKG 604
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A+ KQ +F+ E +L M K G N V++T LME + G+ ++AE +F M+ G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E Y ++ K A +F+ L L P + +I K G
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDEL---TEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
A + + M + + + V +N+L+ E S IYD M++ G Q DV + +
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + + +R +EA M++ GV
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGV 465
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 90/172 (52%), Gaps = 6/172 (3%)
Query: 31 FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQI 90
++EA++ L M + G + VS+T L++ Y + G A+ +F M + G +P+A+TY +
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
++ + + K KEA ++ + E + PD + +I+ A N ++A ++FS M
Sbjct: 510 MIYAYCKQGKIKEARKLRANM---EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 566
Query: 151 QREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
+ + ++VTY ++S + E +YD+M+R G D Y LI +
Sbjct: 567 LKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 6/212 (2%)
Query: 13 FSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAI 72
E I + A K+ + +I M G V S T ++E R G ++ +
Sbjct: 187 IDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKL 246
Query: 73 FRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYM 132
+ G +P A TY I+ +V+ F E V + + D + ++ + +++ +
Sbjct: 247 IKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD---GVVYNKVTYTLLMEL 303
Query: 133 YRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPD 189
K G A K+F M +R I Y SL+S+ N K ++D++ GL P
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363
Query: 190 VVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+Y LI+ K A + EM GV
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 101/203 (49%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ ++G +++K++ + G P ++ ++ AY + ++ E + + M+ G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY ++++ V+ K +AE++F+ + ER ++ D ++ +I + GN +
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEM--RERG-IESDVHVYTSLISWNCRKGNMK 346
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A +F +T++ + S+ TY +L+ E+ + ++MQ G+ V + LI
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ Y + +EA +++ M G
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKG 429
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
G F E ++ YM K G + + S + A + R + IFRRM G + + +
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
I+++ + ++++++ + +KP+ ++ +I Y K ++ +
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEF---SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 148 LMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKAR 204
+M + + ++ VTY LM ++S K++D+M+ G++ DV Y LI+ +
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 205 REEEALAVFEEMLDAGV 221
+ A +F+E+ + G+
Sbjct: 344 NMKRAFLLFDELTEKGL 360
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +A + + G +P++V++ L+ + R G + A + + M+ G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+PS +TY I++ TF + ++A ++ LS E L PD + ++I+ + G
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQL---RLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++F M ++ + V YN+++ E + K+ +M+ L P+V SY +I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
K R+ +EA + E+M+D+G+
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGI 544
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 16/227 (7%)
Query: 8 QHWWDFSEMDSIR----------LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALM 57
WW F + + LI + G ++ +L + + G++PNVV +T L+
Sbjct: 146 NQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 58 EAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERA 117
+ + G A+ +F M LG + TY +++ + K+ E++E + D
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED--- 262
Query: 118 PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEV 174
+ P+ ++ ++ K G + A ++F M +R + + VTYN+L + E E
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 175 SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+K+ DQM+ G+ P++++Y LI+ + + +AL++ ++ G+
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G +A ++ M + G + N+V++ L+ R + N A + +M++ G P+ +
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++ F K +A + L S L P +++++ + + G+ A KM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKS---RGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 147 SLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
M +R I S VTY L+ + N ++ ++ M+ GL PDV +Y++LI+ +
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 204 RREEEALAVFEEMLD 218
+ EA +F+ M++
Sbjct: 457 GQMNEASRLFKSMVE 471
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 110/218 (50%), Gaps = 10/218 (4%)
Query: 11 WDF---SEMDS-IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRY 66
W F E DS + ++ + G EA ++L+ +++ G + + + + A G+ +
Sbjct: 399 WSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQI 458
Query: 67 NNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMF 126
++ +F +M+ GP P TY I++ +F + EA +FE L ER+ KPD +
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL---ERSDCKPDIISY 515
Query: 127 HMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQR 183
+ +I K G+ ++A F M ++ + VTY++LM + V ++++M
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV 575
Query: 184 SGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
G QP++V+Y +L++ K R EA+ ++ +M G+
Sbjct: 576 KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 32/228 (14%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I G+ G +EA + M G NVV + LM+ +G + A +F RM G
Sbjct: 276 MIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETG 335
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFE----------------------------PLL 112
P+ TY ++L V + + V E L
Sbjct: 336 CRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLF 395
Query: 113 SDERA-PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNY 171
D + P+K ++ + M+ AG +A +M S + ++ + T+ YN++ S
Sbjct: 396 CDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKL 455
Query: 172 KEVSKIYD---QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
K++S I+D +M++ G PD+ +Y +LI ++G+ +EA+ +FEE+
Sbjct: 456 KQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + G+ G +EA I + + P+++S+ +L+ G+ G + A F+ MQ G
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY +++ F + + + A +FE +L +P+ +++++ K G
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV---KGCQPNIVTYNILLDCLEKNGRTA 599
Query: 141 KARKMFSLMTQREIPHSTVTYNSL 164
+A ++S M Q+ + ++TY L
Sbjct: 600 EAVDLYSKMKQQGLTPDSITYTVL 623
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 86.3 bits (212), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+T+ K G EAE+ + M G PN VS L+ YG G A ++F M +G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY +LK +G +EAE+ + L P D M++ ++ K+GN
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS-FETNYKEVSKIY---DQMQRSGLQPDVVSYALL 196
KA +F M QR I + TY SL+S K V I + R + P+ V Y
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
++ KA + + + E+M + G
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLG 714
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +G+F ++ ++ M K GYAP +V++ ++ Y + GR+ A + M++ G
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPL-KPDQKMFHMMIYMYRKAGNY 139
+ TY +++ N+ + LL D R + P++ ++ +I + G
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYL----LLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
A ++ + M + + VT+N+L+ E N+KE K++ M+ GL P VSY +L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
++ K + A + M GV
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGV 399
Score = 73.6 bits (179), Expect = 8e-14, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G +EA +L M+K G P++V+++AL+ + + GR+ A+ I R+ +G P+ +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
Y ++ KEA ++E ++ + D F++++ KAG +A +
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHT---RDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKA 203
MT I +TV+++ L++ N E K ++D+M + G P +Y L+ K
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 204 RREEEA 209
EA
Sbjct: 592 GHLREA 597
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 41/238 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI H +GNF EA K+ M G P+ VS+ L++ + ++ A + RM+ G
Sbjct: 339 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Query: 81 P-----------------------------------EPSALTYQIILKTFVEGNKFKEAE 105
+P +TY ++ F + +FK A+
Sbjct: 399 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 458
Query: 106 EVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
E+ + R L P+ ++ +IY + G ++A +++ M T+N L+
Sbjct: 459 EIVCRIY---RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 166 SFETNYKEVSKIYDQMQ---RSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ +V++ + M+ G+ P+ VS+ LIN YG + +A +VF+EM G
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Query: 38 LTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVE 97
L M K P+V + L+ G + + + ++M+ G P+ +TY +L + +
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 98 GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHS 157
+FK A E+ + + S + D ++M+I+ ++ K + M +R I +
Sbjct: 241 KGRFKAAIELLDHMKSKG---VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 158 TVTYNSLMSFETNYKEV---SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
VTYN+L++ +N +V S++ ++M GL P+ V++ LI+ + +EAL +F
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 215 EMLDAGV 221
M G+
Sbjct: 358 MMEAKGL 364
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K G F A++I+ + ++G +PN + ++ L+ R G A I+ M G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
T+ +++ + + K EAEE + SD + P+ F +I Y +G
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG---ILPNTVSFDCLINGYGNSGEGL 560
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA +F MT+ + TY SL+ + +E K + D V Y L+
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
A K+ +A+++F EM+ +
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSI 644
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 56 LMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDE 115
L+ Y R G ++ IFR M G PS T IL + V K E V+ L
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV---KSGEDVSVWSFLKEML 185
Query: 116 RAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYK 172
+ + PD F+++I + G++EK+ + M + + VTYN+++ + + +K
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 173 EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
++ D M+ G+ DV +Y +LI+ ++ R + + +M
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 6/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + + G + +L M PN+ ++ L+ Y + + + ++R + G
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P LT ++ E N + ++ + + ++ D+ F+M+I G
Sbjct: 785 ILPDKLTCHSLVLGICESNMLEIGLKILKAFIC---RGVEVDRYTFNMLISKCCANGEIN 841
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A + +MT I T ++++S ++E + +M + G+ P+ Y LI
Sbjct: 842 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901
Query: 198 NAYGKARREEEALAVFEEML 217
N + + A V EEM+
Sbjct: 902 NGLCRVGDIKTAFVVKEEMI 921
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M+ +G+ P++V+ A+++ Y R G+ + M P+ TY I+L + +K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY---SK 766
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
K+ F S + PD+ H ++ ++ E K+ R + T
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 826
Query: 161 YNSLMSFETNYKEVSKIYDQ---MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+N L+S E++ +D M G+ D + +++ + R +E+ V EM
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886
Query: 218 DAGV 221
G+
Sbjct: 887 KQGI 890
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ +++A ++L+ M + PNVV+ AL++A+ + G+ AE ++ M
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P TY ++ F ++ EA+ +FE ++S + P+ ++ +I + KA +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD---CFPNVVTYNTLINGFCKAKRID 417
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FET-NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ ++F M+QR + +TVTY +L+ F+ + ++ QM G+ P++++Y L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 198 NAYGKARREEEALAVFE 214
+ K + E+A+ VFE
Sbjct: 478 DGLCKNGKLEKAMVVFE 494
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 102/193 (52%), Gaps = 6/193 (3%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
++A + T M G PNV+++++L+ R+++A + M P+ +T+ +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
+ FV+ K EAE++++ ++ + + PD + +I + ++A+ MF LM
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 152 REIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
++ + VTYN+L++ K + +++ +M + GL + V+Y LI+ + +AR +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 209 ALAVFEEMLDAGV 221
A VF++M+ GV
Sbjct: 454 AQMVFKQMVSDGV 466
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K+G+ + A +L M NVV ++ ++++ + ++A +F M+ G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ ++ +A + ++ ER + P+ F+ +I + K G
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMI--ER-KINPNVVTFNALIDAFVKEGKLV 347
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K++ M +R I TY+SL+ E +++ M P+VV+Y LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N + KA+R +E + +F EM G+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGL 431
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 102/201 (50%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ + A +L M K+GY P++V+ ++L+ Y G R ++A A+ +M +G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +T+ ++ NK EA + + ++ + +P+ + +++ K G+ +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMV---QRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLI 197
A + + M +I + V Y++++ Y+ + ++ +M+ G++P+V++Y+ LI
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ R +A + +M++
Sbjct: 303 SCLCNYERWSDASRLLSDMIE 323
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+G EAEK+ M K P++ ++++L+ + R + A+ +F M +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ F + + E E+F + + L + + +I+ + +A + +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREM---SQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+ +F M + + +TYN+L+ ++ K +++ +QRS ++P + +Y ++I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
KA + E+ +F + GV
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGV 536
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +EA+ + M PNVV++ L+ + + R + +FR M G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY ++ F + A+ VF+ ++SD + P+ ++ ++ K G E
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD---GVHPNIMTYNTLLDGLCKNGKLE 487
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
KA +F + + ++ + TYN ++ +V +D + G++PDV+ Y +I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ + + +EEA A+F +M + G
Sbjct: 548 SGFCRKGLKEEADALFRKMREDG 570
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K +E ++ M++ G N V++T L+ + + +NA+ +F++M + G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY +L + K ++A VFE L +R+ ++P +++MI KAG E
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL---QRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPD 189
+F ++ + + + YN+++S +E ++ +M+ G PD
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 36/236 (15%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + +G+ A+++L M G+ P+ ++T LM+ Y + GR++ A + M+
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLS-----------------------DERA 117
EP+ +TY ++++ + K EA +F+ +L DE
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEAC 351
Query: 118 PL---------KPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---M 165
L PD + +I+ K G +ARK+F + IP S +TYN+L M
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGM 410
Query: 166 SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ E +++D M +P+ +Y +LI K +E + V EEML+ G
Sbjct: 411 CEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 6/198 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K+ + A K+L + MG PN+V++T ++ Y G +A+ + M G
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P A TY +++ + + +F EA V + + E+ ++P++ + +MI K
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDM---EKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 141 KARKMFSLMTQRE-IPHSTVTYNSLMSFETNYK--EVSKIYDQMQRSGLQPDVVSYALLI 197
+AR MF M +R +P S++ + + ++K E ++ +M ++ PD + LI
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 198 NAYGKARREEEALAVFEE 215
+ K R EA +F+E
Sbjct: 374 HWLCKEGRVTEARKLFDE 391
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM-Q 77
I L+ +G G + + +I + G +V S L+ + R++ A+F+ +
Sbjct: 124 IDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKE 183
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
+ G P+ T +++K + N + A +V + + S L P+ + ++ Y G
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPS---MGLVPNLVTYTTILGGYVARG 240
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYA 194
+ E A+++ M R TY LM + E + + D M+++ ++P+ V+Y
Sbjct: 241 DMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 300
Query: 195 LLINAYGKARREEEALAVFEEMLD 218
++I A K ++ EA +F+EML+
Sbjct: 301 VMIRALCKEKKSGEARNMFDEMLE 324
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + N EA +I M G P++V+H ++E R + ++A +F M++ G
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P P+ +Y I+++ F + + + A E F+ ++ + L+PD ++ +I + +
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD---SGLQPDAAVYTCLITGFGTQKKLD 419
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLI 197
++ M ++ P TYN+L+ N K ++IY++M ++ ++P + ++ +++
Sbjct: 420 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 479
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+Y AR E AV++EM+ G+
Sbjct: 480 KSYFVARNYEMGRAVWDEMIKKGI 503
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + N EA +I M G P++V+H ++E R + ++A +F M++ G
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P P+ +Y I+++ F + + + A E F+ ++ + L+PD ++ +I + +
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD---SGLQPDAAVYTCLITGFGTQKKLD 420
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLI 197
++ M ++ P TYN+L+ N K ++IY++M ++ ++P + ++ +++
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+Y AR E AV++EM+ G+
Sbjct: 481 KSYFVARNYEMGRAVWDEMIKKGI 504
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G+ ++A+ + + M + G APNV ++ +++ + GR+++A+ + R M P L
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T+ ++ V+ K EAE++ + +L + PD ++ MIY + K ++ A+ MF
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEML---HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKA 203
LM ++ VT+N+++ K V ++ ++ R GL + +Y LI+ + +
Sbjct: 425 DLMASPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 204 RREEEALAVFEEMLDAGV 221
A +F+EM+ GV
Sbjct: 481 DNLNAAQDLFQEMISHGV 498
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 100/204 (49%), Gaps = 10/204 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K G+ A +L+ M + P+VV ++A+++ + G +++A+ +F M G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY ++ F ++ +A+ + ++ E + PD F+ +I K G
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFNALISASVKEGKLF 383
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K+ M R I TVTYNS++ + + ++D M PDVV++ +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 439
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ Y +A+R +E + + E+ G+
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGL 463
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K F++A+ + M +P+VV+ +++ Y R R + + R + G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ TY ++ F E + A+++F+ ++S + PD ++++Y + + E
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG---VCPDTITCNILLYGFCENEKLE 519
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
+A ++F ++ +I TV YN ++ +V + +D + G++PDV +Y ++I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ + +A +F +M D G
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNG 602
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 113/229 (49%), Gaps = 11/229 (4%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
I EW +++ ++ + + ++ GK + + + M + G P ++ L++ Y
Sbjct: 173 IFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVY 232
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
+GG +A +M +G +P +T I+L+ + + +F++AEE F+ DE K
Sbjct: 233 SKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN---K 289
Query: 121 PDQKM------FHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV 174
D + ++ MI Y K+G ++A + F M + I +TVT+N+++ N ++
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 175 SKIYDQMQRSGLQ--PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
++ M+ L PD +Y +LI+ + K E A A F+EM D G+
Sbjct: 350 GEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGL 398
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM-QTL 79
LI A GN +A + M + G N V + +L++ Y + G + AEAI+R++ Q+
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Query: 80 GPE--PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
P T ++ + E + ++AE +F+ + A ++ F MM+ MY+K G
Sbjct: 676 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA----NEFTFAMMLCMYKKNG 731
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNS---LMSFETNYKEVSKIYDQMQRSGLQPDVVSYA 194
+E+A ++ M + +I ++YNS L + + +KE + + +M SG+QPD ++
Sbjct: 732 RFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFK 791
Query: 195 LLINAYGKARREEEALAVFEEM 216
L K ++A+ EE+
Sbjct: 792 SLGTILMKLGMSKKAVRKIEEI 813
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I++ K G N AE++ M + P+VV + L+ A+ G A + M+ G
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+++ Y ++K + + EAE ++ LL PD + MI +Y +
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN--YKEVSKIYDQMQRSGLQPDVVSYALLIN 198
KA +F M QR + L ++ N ++E ++I QM+ + D +SY ++
Sbjct: 701 KAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLG 760
Query: 199 AYGKARREEEALAVFEEMLDAGV 221
+ R +EA+ F+EM+ +G+
Sbjct: 761 LFALDGRFKEAVETFKEMVSSGI 783
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A+G + +A ++ M G P+ ++ L++ + +M+ G
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ Y ++ +FV+ + AEEV++ ++ ++PD ++ ++I + GN +
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMV---EYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQ---PDVVSYA 194
+A M + IP ++V YNSL+ T E IY ++ +S + PDV +
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 195 LLINAYGKARREEEALAVFEEMLDAG 220
+IN Y + +A A+F+ M G
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQRG 713
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 90/237 (37%), Gaps = 40/237 (16%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I +GK G EA + M + G P V+ ++ YG G+ ++ + M+ L
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LH 362
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY I++ + N + A F+ + D LKPD + ++Y + E
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDD---GLKPDPVSYRTLLYAFSIRHMVE 419
Query: 141 KARKMFSLMTQREIPHSTVTYNSL--MSFETNYKEVS-------KIYDQMQRSGLQPD-- 189
+A + + M + T ++L M E E S + M G +
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 190 -------------------------VVSYALLINAYGKARREEEALAVFEEMLDAGV 221
V+ Y ++I AYG ++ E+A +FE M+ GV
Sbjct: 480 AYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + ++ +AE I M + G A N + ++ Y + GR+ A I ++M+ +
Sbjct: 689 MINLYSERSMVRKAEAIFDSMKQRGEA-NEFTFAMMLCMYKKNGRFEEATQIAKQMREMK 747
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
L+Y +L F +FKEA E F+ ++S + ++PD F + + K G +
Sbjct: 748 ILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS---SGIQPDDSTFKSLGTILMKLGMSK 804
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS 166
KA + + ++EI + S +S
Sbjct: 805 KAVRKIEEIRKKEIKRGLELWISTLS 830
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 85.5 bits (210), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G+ ++A+ + + M + G APNV ++ +++ + GR+++A+ + R M P L
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T+ ++ V+ K EAE++ + +L + PD ++ MIY + K ++ A+ MF
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEML---HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKA 203
LM ++ VT+N+++ K V ++ ++ R GL + +Y LI+ + +
Sbjct: 425 DLMASPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 204 RREEEALAVFEEMLDAGV 221
A +F+EM+ GV
Sbjct: 481 DNLNAAQDLFQEMISHGV 498
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 100/204 (49%), Gaps = 10/204 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K G+ A +L+ M + P+VV ++A+++ + G +++A+ +F M G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY ++ F ++ +A+ + ++ E + PD F+ +I K G
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFNALISASVKEGKLF 383
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K+ M R I TVTYNS++ + + ++D M PDVV++ +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 439
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ Y +A+R +E + + E+ G+
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGL 463
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K F++A+ + M +P+VV+ +++ Y R R + + R + G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ TY ++ F E + A+++F+ ++S + PD ++++Y + + E
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG---VCPDTITCNILLYGFCENEKLE 519
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
+A ++F ++ +I TV YN ++ +V + +D + G++PDV +Y ++I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ + +A +F +M D G
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNG 602
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LIT + G EA +L M + G P+ S+ L+ A+ R GR + A M + G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P + Y +L T + K +A E+F L P+ ++ M +G+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKL---GEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A M M I +TYNS++S E E ++ M+ P VV+Y +++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ KA R E+A+ V E M+ G
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGC 539
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A +G +EA K++ M G P++ ++ ++ + G + A + R ++ G
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP ++Y I+L+ + K++E E++ + S++ P+ + ++I + G E
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK---CDPNVVTYSILITTLCRDGKIE 350
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A + LM ++ + +Y+ L++ E + + M G PD+V+Y ++
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
K + ++AL +F ++ + G
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGC 434
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K ++A ++L M ++P+ V++ ++ + G+ + A + ++ +
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 81 PEPSALTYQIILK-TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+P+ +TY I+++ T +EG EA ++ + +LS LKPD ++ +I K G
Sbjct: 224 CQPTVITYTILIEATMLEGG-VDEALKLMDEMLS---RGLKPDMFTYNTIIRGMCKEGMV 279
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALL 196
++A +M + + ++YN L+ N ++E K+ +M P+VV+Y++L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I + + EEA+ + + M + G+
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGL 364
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+LI N +A +++ + K G P+V ++ AL+ + + R ++A + RM++
Sbjct: 129 KLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P +TY I++ + K A +V LLSD +P + ++I G
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN---CQPTVITYTILIEATMLEGGV 244
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALL 196
++A K+ M R + TYN+++ V + ++ ++ G +PDV+SY +L
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 197 INAY---GKARREEEALA-VFEEMLDAGV 221
+ A GK E+ + +F E D V
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 1 ILEWLRTQHWWDFSEMDSIR---LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALM 57
+L+ +R++ DFS D++ +I + +G + A K+L + P V+++T L+
Sbjct: 180 VLDRMRSK---DFSP-DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 58 EAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERA 117
EA G + A + M + G +P TY I++ K + FE + + E
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC---KEGMVDRAFEMVRNLELK 292
Query: 118 PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEV 174
+PD +++++ G +E+ K+ + M + + VTY+ L++ + +E
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 175 SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ M+ GL PD SY LI A+ + R + A+ E M+ G
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 9/202 (4%)
Query: 6 RTQHW--WDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG 63
R QH F + +++ + GN+ E+ +L M + GY P+V+ T L++ +
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
A + ++ G +P Y ++ F + N+ +A V + + S + PD
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD---FSPDT 193
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQ 180
+++MI G + A K+ + + + +TY L+ E E K+ D+
Sbjct: 194 VTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE 253
Query: 181 MQRSGLQPDVVSYALLINAYGK 202
M GL+PD+ +Y +I K
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCK 275
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 35/224 (15%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
A L M K+G+ P++V+ T+L+ Y R +A A+F ++ +G +P+ +TY ++
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAP--------------------------------LK 120
+ + A E+F + ++ P ++
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKI 177
P+ F +I + K G +A++++++M Q + TY SL++ Y E ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 178 YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ M+R+G P+ V Y LI+ + K++R E+ + +F EM GV
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K + N A ++ M G PNVV++ AL+ GR+ +A + R M
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+ +T+ ++ FV+ K EA+E++ ++ + + PD + +I G +
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMI---QMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+AR+MF LM + + V Y +L+ K V KI+ +M + G+ + ++Y +LI
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 198 NAYGKARREEEALAVFEEM 216
Y R + A VF +M
Sbjct: 371 QGYCLVGRPDVAQEVFNQM 389
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +EA ++ M + G PN V +T L+ + + R + IF M G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY ++++ + + A+EVF +S RAP PD + +++++ G E
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQ-MSSRRAP--PDIRTYNVLLDGLCCNGKVE 415
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
KA +F M +RE+ + VTY ++ +V +D + G++P+V++Y +I
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ + + EA ++F++M + G
Sbjct: 476 SGFCRRGLIHEADSLFKKMKEDG 498
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K G EA+++ M +M P+V ++ +L+ G + A +F M+ G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ + Y ++ F + + ++ ++F + + + + + ++I Y G +
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM---SQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A+++F+ M+ R P TYN L+ +V K I++ M++ + ++V+Y ++I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
K + E+A +F + G+
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGM 464
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 31 FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQI 90
FN+A + T M P+++ T L+ + RY+ ++F +MQ LG P T I
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
++ ++ A ++ + +PD F ++ Y E A +F +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMM---KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 151 QREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREE 207
+ VTY +L+ + ++ ++++QM +G +P+VV+Y L+ + R
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 208 EALAVFEEML 217
+A + +M+
Sbjct: 241 DAAWLLRDMM 250
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
+Y+ IL+ + +F +A ++F ++ P D F ++ + K Y+ +F
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIID---FTRLLSVIAKMNRYDVVISLF 106
Query: 147 SLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
M IP T N +M + S +M + G +PD+V++ L+N Y
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 204 RREEEALAVFEEMLDAG 220
R E+A+A+F+++L G
Sbjct: 167 NRIEDAIALFDQILGMG 183
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 84.0 bits (206), Expect = 6e-17, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 110/204 (53%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + G ++A + + K G P++ + T L+ A R G ++AE++FR M+T G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY ++ + K + +VFE + A + PD ++++I+ G +
Sbjct: 474 LKLDVVTYNNLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ S + +R ST+ + ++ S +++E ++ M ++PDVV+ + L+
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ Y KA+R E+A+ +F ++LDAG+
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGL 614
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 18 SIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ 77
S LI A + G+ ++AE + M G +VV++ LM YG+ + N + M+
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
+ G P TY I++ + V EA E+ L+ R P F +I + K G
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEIISELI---RRGFVPSTLAFTDVIGGFSKRG 562
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYA 194
++++A ++ M + VT ++L+ + + K +++++ +GL+PDVV Y
Sbjct: 563 DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
LI+ Y E+A + M+ G+
Sbjct: 623 TLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + +G +EA +I++ + + G+ P+ ++ T ++ + + G + A ++ M L
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +T +L + + + ++A +F LL A LKPD +++ +I+ Y G+ E
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD---AGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM 165
KA ++ LM QR + + T+++L+
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALV 660
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 35 EKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKT 94
E+ + ++ PN+ +++ + G A IF+ + LG P + Y ++
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 95 FVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREI 154
+ + +A + F LL ++ P ++I + G+ A +F M +
Sbjct: 418 YCNLGRTDKAFQYFGALL---KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Query: 155 PHSTVTYNSLMSFETNYKEVSKIY---DQMQRSGLQPDVVSYALLINAYGKARREEEALA 211
VTYN+LM +++K++ D+M+ +G+ PDV +Y +LI++ +EA
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE 534
Query: 212 VFEEMLDAG 220
+ E++ G
Sbjct: 535 IISELIRRG 543
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 114/249 (45%), Gaps = 39/249 (15%)
Query: 12 DFSEMDSIR---LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNN 68
D E+D+I +IT + +N+A + M K G P+ V+++A+++ Y + G+
Sbjct: 215 DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274
Query: 69 AEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP---------- 118
+++ R G +P A+ + ++ K F E + V + + S + P
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334
Query: 119 ----------------------LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPH 156
L P++K ++ +Y KA A +++ M ++ P
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPM 394
Query: 157 STVTYNSLMSFETNY---KEVSKIYDQMQRS-GLQPDVVSYALLINAYGKARREEEALAV 212
+ YN+L++ + +E ++++ M+ S +PD SY ++N YG + E+A+ +
Sbjct: 395 DFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMEL 454
Query: 213 FEEMLDAGV 221
FEEML AGV
Sbjct: 455 FEEMLKAGV 463
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 16 MDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRR 75
M S+R G+Q F E++ M K G + ++++ ++ R YN A F R
Sbjct: 193 MKSLRF----GRQ--FQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFER 246
Query: 76 MQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRK 135
M G P +TY IL + + K +E ++E ++ KPD F ++ M+ +
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVA---TGWKPDAIAFSVLGKMFGE 303
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVS 192
AG+Y+ R + M ++ + V YN+L M ++++M +GL P+ +
Sbjct: 304 AGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKT 363
Query: 193 YALLINAYGKARREEEALAVFEEM 216
L+ YGKAR +AL ++EEM
Sbjct: 364 LTALVKIYGKARWARDALQLWEEM 387
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ K G F+ + I+ M+ +G + V++ +++ YG+ G + E++ M G
Sbjct: 221 LISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
Query: 81 PE-PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P T I+ ++ G ++ E + + ++PD F+++I + KAG Y
Sbjct: 281 DSLPDVCTLNSIIGSYGNGRNMRKMESWYSRF---QLMGVQPDITTFNILILSFGKAGMY 337
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALL 196
+K + M +R +TVTYN ++ + K+ D +M+ G++P+ ++Y L
Sbjct: 338 KKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSL 397
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
+NAY KA + +V +++++ V
Sbjct: 398 VNAYSKAGLVVKIDSVLRQIVNSDV 422
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYA-PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+I +GK G F E E +L M + G + P+V + +++ +YG G E+ + R Q +
Sbjct: 256 IIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLM 315
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G +P T+ I++ +F + +K+ V + + E+ ++++I + KAG
Sbjct: 316 GVQPDITTFNILILSFGKAGMYKKMCSVMDFM---EKRFFSLTTVTYNIVIETFGKAGRI 372
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVS----YAL 195
EK +F M + + +++TY SL++ + V KI D + R + DVV +
Sbjct: 373 EKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKI-DSVLRQIVNSDVVLDTPFFNC 431
Query: 196 LINAYGKA 203
+INAYG+A
Sbjct: 432 IINAYGQA 439
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 89/174 (51%), Gaps = 6/174 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + GK G + + ++ +M K ++ V++ ++E +G+ GR + +FR+M+ G
Sbjct: 327 LILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQG 386
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+++TY ++ + + + + V +++ + + D F+ +I Y +AG+
Sbjct: 387 VKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSD---VVLDTPFFNCIINAYGQAGDLA 443
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVV 191
++++ M +R+ +T+ +++ T + V ++ QM SG D++
Sbjct: 444 TMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSGENLDIL 497
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 12 DFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
D ++SI I ++G N + E + MG P++ + L+ ++G+ G Y +
Sbjct: 285 DVCTLNSI--IGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCS 342
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+ M+ + +TY I+++TF + + ++ ++VF + + +KP+ + ++
Sbjct: 343 VMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKM---KYQGVKPNSITYCSLVN 399
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQP 188
Y KAG K + + ++ T +N +++ + + ++Y QM+ +P
Sbjct: 400 AYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKP 459
Query: 189 DVVSYALLINAY 200
D +++A +I Y
Sbjct: 460 DKITFATMIKTY 471
>AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) |
chr3:1956658-1958240 REVERSE
Length = 486
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 114/221 (51%), Gaps = 8/221 (3%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+ + LR Q ++ E ++L+ GK G N A+K+ M + G P V +TAL+ AY
Sbjct: 110 VFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAY 169
Query: 61 GRGGRYNNAEAIFRRMQTL-GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPL 119
R ++A +I +M++ +P TY +LK V+ ++F + +++ + DER +
Sbjct: 170 TRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEM--DERL-I 226
Query: 120 KPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTV-TYNSLMSFETNYKEVSKI- 177
P+ ++++ Y + G +++ K+ S M V T N ++S N ++ +
Sbjct: 227 TPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMME 286
Query: 178 --YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
Y++ + G++P+ ++ +LI +YGK R ++ +V E M
Sbjct: 287 SWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 7/187 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM-QTL 79
L+ A F+ + + M++ PN V+ ++ YGR GR++ E + M +
Sbjct: 201 LLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVST 260
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+P T IIL F K E +E ++P+ + F+++I Y K Y
Sbjct: 261 ACKPDVWTMNIILSVFGNMGKIDMMESWYEKF---RNFGIEPETRTFNILIGSYGKKRMY 317
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLM-SFET--NYKEVSKIYDQMQRSGLQPDVVSYALL 196
+K + M + E P +T TYN+++ +F + K + +DQM+ G++ D ++ L
Sbjct: 318 DKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCL 377
Query: 197 INAYGKA 203
IN Y A
Sbjct: 378 INGYANA 384
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 42/221 (19%)
Query: 21 LITAHGKQGNFNEAEKILTYM-NKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+++ +G+ G F++ EK+L+ M P+V + ++ +G G+ + E+ + + +
Sbjct: 236 VLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNF 295
Query: 80 GPEPSALTYQI-----------------------------------ILKTFVEGNKFKEA 104
G EP T+ I I++ F + K
Sbjct: 296 GIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNM 355
Query: 105 EEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL 164
E F+ + S+ +K D K F +I Y AG + K L + EIP +T YN++
Sbjct: 356 ELTFDQMRSE---GMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAV 412
Query: 165 MSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGK 202
+S + E+ ++Y +M+ D ++ +++ AY K
Sbjct: 413 ISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEK 453
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K+GN ++A+K+ + K P VVS L+ Y + G + + +M+
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY ++ + NK A +F+ + + L P+ +F +I+ + + G +
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMC---KRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS-FETNYKEVS--KIYDQMQRSGLQPDVVSYALLI 197
++ + M + + V YN+L++ F N V+ I D M R GL+PD ++Y LI
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + + E AL + +EM G+
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGI 446
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+ + A + M K G PN V T L+ + R G + + +++M + G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P + Y ++ F + A + + ++ R L+PD+ + +I + + G+ E
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI---RRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ M Q I V +++L M E + + +M R+G++PD V+Y +++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+A+ K + + +EM G
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDG 515
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K GN +E ++ M K P+V +++AL+ A + + + A +F M G
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ + + ++ + +E ++ +LS L+PD +++ ++ + K G+
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLS---KGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
AR + M +R + +TY +L+ +V +I +M ++G++ D V ++ L+
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
K R +A EML AG+
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGI 481
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 87/221 (39%), Gaps = 38/221 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K G+ A I+ M + G P+ +++T L++ + RGG A I + M G
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E + + ++ + + +AE +L RA +KPD + MM+ + K G+ +
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREML---RAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 141 KARKMFSLM-TQREIPH----------------------------------STVTYNSLM 165
K+ M + +P +TYN+L+
Sbjct: 503 TGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Query: 166 SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARRE 206
+ SK Y Q G+ D+ SY ++N +A ++
Sbjct: 563 EGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRASKD 603
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 125 MFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQM 181
+F++++ + K GN A+K+F +T+R + + V++N+L++ N E ++ QM
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 182 QRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
++S +PDV +Y+ LINA K + + A +F+EM G+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+++ K G + A ++ M P +T L+ Y + G+ A +F M+ G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY ++K + + EA ++ +L D L PD + ++ + K G E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD---GLTPDVVFLNNLMNILGKVGRVE 355
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FET--NYKEVSKIYDQMQRSGLQPDVVSYALL 196
+ +FS M + V+YN+++ FE+ + EVS +D+M+ + P +Y++L
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
I+ Y K R E+AL + EEM + G
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKG 439
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I GK G +EA + M G P+V ++ ALM + G N A ++ R+M+ G
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
++ IIL F + A E+FE + + + +KPD ++ ++ + AG +E
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETI---KHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM 165
+A +M M + + +TY+S++
Sbjct: 602 EAARMMREMKDKGFEYDAITYSSIL 626
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 10 WWDFSEMDSIR--------LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYG 61
W+D + DS+ LI + K +A +L M++ G+ P ++ +L+ A G
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 62 RGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKP 121
+ RY A +F+ ++ S+ Y +++K F + K EA ++F + + P
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP--- 512
Query: 122 DQKMFHMMIYMYRKAGNYEKA----RKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKI 177
D ++ ++ KAG +A RKM + +I + N + + ++
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAI-EM 571
Query: 178 YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
++ ++ SG++PD V+Y L+ + A EEA + EM D G
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 47 APNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEE 106
+P V+S L++A GR + A ++F + + +P++ TY ++ ++ + ++ E
Sbjct: 161 SPAVLSE--LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 107 VFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS 166
V+ + ++ PD + +I Y K G + A ++F M + + Y +L+
Sbjct: 219 VYTEMCNE--GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 167 FETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+V K ++++M+R+G P V +Y LI GKA R +EA +++ML G+
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 104/206 (50%), Gaps = 6/206 (2%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
+++I G+ N A IL M + G + L+E+YG+ G + IF++M+
Sbjct: 154 MKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD 213
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
LG E + +Y + K + ++ A+ F ++S+ ++P + +++M++ + +
Sbjct: 214 LGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE---GVEPTRHTYNLMLWGFFLSLR 270
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYAL 195
E A + F M R I T+N++++ +K E K++ +M+ + + P VVSY
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
+I Y R ++ L +FEEM +G+
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGI 356
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
+ LI ++GK G E+ KI M +G + S+ +L + R GRY A+ F +M +
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G EP+ TY ++L F + + A FE + + + PD F+ MI + +
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM---KTRGISPDDATFNTMINGFCRFKK 305
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYAL 195
++A K+F M +I S V+Y +++ V +I+++M+ SG++P+ +Y+
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 196 LINAYGKARREEEALAVFEEML 217
L+ A + EA + + M+
Sbjct: 366 LLPGLCDAGKMVEAKNILKNMM 387
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + +EAEK+ M P+VVS+T +++ Y R ++ IF M++ G
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+A TY +L + K EA+ + + +++ AP D +F ++ KAG+
Sbjct: 356 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP--KDNSIFLKLLVSQSKAGDMA 413
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQM 181
A ++ M +P Y L+ + Y K+ D +
Sbjct: 414 AATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTL 457
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +++A ++L+ M + PNVV+ AL++A+ + G+ AE + M
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +TY +++ F N+ EA+++F+ ++S + P+ + ++ +I + K E
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD---CLPNIQTYNTLINGFCKCKRVE 415
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FET-NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
++F M+QR + +TVTY +++ F+ + ++ QM + + D+++Y++L+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 198 NAYGKARREEEALAVFE 214
+ + + AL +F+
Sbjct: 476 HGLCSYGKLDTALVIFK 492
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
I ++ + A +L M K+GY P++V+ ++L+ Y R ++A A+ +M +G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
+P T+ ++ NK EA + + ++ + +PD + ++ K G+ +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMV---QRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 142 ARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLIN 198
A + + M I + V +N+++ Y+ V ++ +M+ G++P+VV+Y LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 199 AYGKARREEEALAVFEEMLDAGV 221
R +A + ML+ +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKI 324
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A + T M G PNVV++ +L+ GR+++A + M P+ +T+ ++
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
F + K EAE++ E ++ + + PD ++++I + ++A++MF M ++
Sbjct: 337 AFFKEGKLVEAEKLHEEMI---QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 154 IPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
+ TYN+L++ K V +++ +M + GL + V+Y +I + +A + A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 211 AVFEEML 217
VF++M+
Sbjct: 454 MVFKQMV 460
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ K+G+ + A +L M NVV ++++ + A +F M+T G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ ++ +A + +L + + P+ F+ +I + K G
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK---INPNVVTFNALIDAFFKEGKLV 345
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K+ M QR I T+TYN L+ E +++ M P++ +Y LI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N + K +R E+ + +F EM G+
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGL 429
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + ++A ++ M +MGY P+ + T L+ + + A A+ +M G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +TY ++ + A + + E A +K + +F+ +I K + E
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKM---EAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALLI 197
A +F+ M + I + VTYNSL++ NY + S++ M + P+VV++ LI
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 198 NAYGKARREEEALAVFEEML 217
+A+ K + EA + EEM+
Sbjct: 336 DAFFKEGKLVEAEKLHEEMI 355
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K + ++ M++ G N V++T +++ + + G ++A+ +F++M +
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+TY I+L K A +F+ L +++ ++ + +++ MI KAG
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYL---QKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +F ++ I VTYN+++S + +E ++ +M+ G P+ +Y LI
Sbjct: 521 EAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
A + + + +EM +G
Sbjct: 578 RANLRDCDRAASAELIKEMRSSG 600
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 6/172 (3%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P++V L+ A + ++ ++ +MQTLG TY I + F ++ A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
++ + +PD ++ Y + A + M + T T+ +L+
Sbjct: 141 LAKMM---KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 167 --FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
E + DQM + G QPD+V+Y ++N K + AL + +M
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 104/198 (52%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ G+ + A +L M + +V +++ ++++ R G + A ++F+ M+T G + S +
Sbjct: 195 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 254
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY +++ + K+ + + + ++S E + P+ F++++ ++ K G ++A +++
Sbjct: 255 TYNSLVRGLCKAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQEANELY 311
Query: 147 SLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
M R I + +TYN+LM + E + + D M R+ PD+V++ LI Y
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371
Query: 204 RREEEALAVFEEMLDAGV 221
+R ++ + VF + G+
Sbjct: 372 KRVDDGMKVFRNISKRGL 389
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/208 (23%), Positives = 100/208 (48%), Gaps = 10/208 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K G +N+ +L M PNV++ L++ + + G+ A +++ M T G
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ + N+ EA + + ++ R PD F +I Y +
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMV---RNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K+F +++R + + VTY+ L+ K +++ +M G+ PDV++Y +L+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 198 NAYGKARREEEALAVFEEM----LDAGV 221
+ + E+AL +FE++ +D G+
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 102/203 (50%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + Q +EA +L M + +P++V+ T+L++ Y R ++ +FR + G
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 388
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+A+TY I+++ F + K K AEE+F+ ++S + PD + +++ G E
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG---VLPDVMTYGILLDGLCDNGKLE 445
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA ++F + + ++ V Y ++ M ++ ++ + G++P+V++Y ++I
Sbjct: 446 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 505
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ K EA + +M + G
Sbjct: 506 SGLCKKGSLSEANILLRKMEEDG 528
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A +L + K+GY P+ + L++ G+ + A + RM G +P +TY I+
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
A ++ + E +K D + +I + G + A +F M +
Sbjct: 192 GICRSGDTSLALDLLRKM---EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 248
Query: 154 IPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
I S VTYNSL + + + + + M + P+V+++ +L++ + K + +EA
Sbjct: 249 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 308
Query: 211 AVFEEMLDAGV 221
+++EM+ G+
Sbjct: 309 ELYKEMITRGI 319
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 35/213 (16%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + ++ K+ ++K G N V+++ L++ + + G+ AE +F+ M + G
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDER------------------------ 116
P +TY I+L + K ++A E+FE L +
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483
Query: 117 --------APLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF- 167
+KP+ + +MI K G+ +A + M + + TYN+L+
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543
Query: 168 --ETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
+ + +K+ ++M+ G D S ++I+
Sbjct: 544 LRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 38/234 (16%)
Query: 24 AHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEP 83
HG + +EA ++ M +MGY P+ V+ T L+ + + + A A+ RM G +P
Sbjct: 156 CHGNR--ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP 213
Query: 84 SALTYQ-------------------------------IILKTFVEG-NKFKEAEEVFEPL 111
+TY +I T ++G K+K ++ F+
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 112 LSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---E 168
E +KPD ++ +I G + A ++ S M ++ I V +N+L+ E
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 169 TNYKEVSKIYDQMQRSG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
E K+YD+M +S PDVV+Y LI + K +R EE + VF EM G+
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
++ + A IL M K+GY P++V+ +L+ + G R + A A+ +M +G +P +
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T+ ++ + NK EA + E ++ +PD + +I K G + A +
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVV---KGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLINAYGKA 203
+ M + +I V YN+++ YK + +D +M+ G++PDV +Y LI+
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 204 RREEEALAVFEEMLDAGV 221
R +A + +ML+ +
Sbjct: 299 GRWSDASRLLSDMLEKNI 316
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K + ++A + M G P+V ++ L+ GR+++A + M
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P + + ++ FV+ K EAE++++ ++ + PD ++ +I + K E
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF--PDVVAYNTLIKGFCKYKRVE 373
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FET-NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ ++F M+QR + +TVTY +L+ F+ + ++ QM G+ PD+++Y +L+
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 198 NAYGKARREEEALAVFEEM 216
+ E AL VFE M
Sbjct: 434 DGLCNNGNVETALVVFEYM 452
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K+G + A +L M K +VV + +++ + ++A +F +M+T G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P TY ++ ++ +A + +L + PD F+ +I + K G
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN---INPDLVFFNALIDAFVKEGKLV 337
Query: 141 KARKMFSLMTQ-REIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALL 196
+A K++ M + + V YN+L+ YK V + ++ +M + GL + V+Y L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I+ + +AR + A VF++M+ GV
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGV 422
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 3 EWLRTQHWW-DFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYG 61
E ++++H + D ++ LI K E ++ M++ G N V++T L+ +
Sbjct: 345 EMVKSKHCFPDVVAYNT--LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 62 RGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKP 121
+ +NA+ +F++M + G P +TY I+L + A VFE + ++ +K
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM---QKRDMKL 459
Query: 122 DQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIY 178
D + MI KAG E +F ++ + + + VTY ++MS +E ++
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 179 DQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+M+ G P+ +Y LI A + E + + +EM G
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM-QTL 79
LI+ G +++A ++L+ M + P++V AL++A+ + G+ AE ++ M ++
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P + Y ++K F + + +E EVF + + L + + +I+ + +A +
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM---SQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALL 196
+ A+ +F M + +TYN L+ N V +++ MQ+ ++ D+V+Y +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I A KA + E+ +F + GV
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGV 492
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 10/213 (4%)
Query: 12 DFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
+FSE+ LI K G EA + M + G+A S L+E Y + G +++A
Sbjct: 270 EFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG 329
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+ M G P+ TY I + + + +A E+ + + PD ++ +++
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA-------PDVVSYNTLMH 382
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQP 188
Y K G + +A +F + +I S VTYN+L + N + ++ ++M + P
Sbjct: 383 GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFP 442
Query: 189 DVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
DV++Y L+ + K A V++EML G+
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 46 YAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAE 105
+AP++ + ++ + G A R++ +G P +TY +++ ++E +FK A
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 106 EVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL- 164
+++ +L R L P + ++IY + KAG E+A + + M +R + + +T+N+L
Sbjct: 571 NLYDEML---RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Query: 165 --MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
M N E + +M+ G+ P+ SY +LI+ + EE + +++EMLD
Sbjct: 628 YGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 99/240 (41%), Gaps = 48/240 (20%)
Query: 25 HG--KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPE 82
HG K G F EA + + P++V++ L++ G A+ + M T
Sbjct: 382 HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF 441
Query: 83 PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD-----------------QKM 125
P +TY ++K FV+ A EV++ +L R +KPD K
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEML---RKGIKPDGYAYTTRAVGELRLGDSDKA 498
Query: 126 FHM--------------MIYMYR-----KAGNYEKA----RKMFSL-MTQREIPHSTVTY 161
F + IY R K GN KA RK+F + + + ++TV
Sbjct: 499 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 558
Query: 162 NSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
L + + +K +YD+M R L P V++Y +LI + KA R E+A EM GV
Sbjct: 559 GYLENGQ--FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 73 FRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYM 132
F +M G PS I+LK + +A V+E ++ + P F+ M+
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEH---GIMPTVITFNTMLDS 247
Query: 133 YRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS-FETNYK--EVSKIYDQMQRSGLQPD 189
KAG+ E+ K++ M +R I S VTYN L++ F N K E + + M+RSG
Sbjct: 248 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 307
Query: 190 VVSYALLINAYGKARREEEALAVFEEMLDAGV 221
S+ LI Y K ++A V +EML+AG+
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
I K GN +A + + ++G P+ V++T ++ Y G++ A ++ M
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
PS +TY +++ + + ++A F+ ++ ++P+ + ++Y KAGN ++
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQA---FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 142 ARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPD 189
A + M + IP + +Y L+S +++ EV K+Y +M ++PD
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 39/220 (17%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
N+A + M + G P V++ ++++ + G + I+ M+ E S +TY I+
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 92 LKTFVEGNKFKEAEEV---------------FEPLL---------------SDE--RAPL 119
+ F + K +EA F PL+ +DE A +
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 120 KPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSK 176
P +++ I G + AR++ S M ++ V+YN+LM + E S
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDV----VSYNTLMHGYIKMGKFVEASL 395
Query: 177 IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
++D ++ + P +V+Y LI+ ++ E A + EEM
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI H K G +A + T M K G PNV++H AL+ + G + A +M+ G
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP 118
P+ +Y +++ + K++E ++++ +L E P
Sbjct: 651 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 99/241 (41%), Gaps = 44/241 (18%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + GN A+++ M P+V+++T L++ + + G + A ++ M G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 81 PEPSALTYQIILKTFVEGN-KFKEAEEVF----EPLLSDERAP----------------- 118
+P Y T G + ++++ F E + +D AP
Sbjct: 475 IKPDGYAYT----TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 119 ---------------LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNS 163
L PD + +I Y + G ++ AR ++ M ++ + S +TY
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 590
Query: 164 LMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
L+ + + + +M++ G++P+V+++ L+ KA +EA +M + G
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 221 V 221
+
Sbjct: 651 I 651
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 82.0 bits (201), Expect = 3e-16, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K N EA KIL + G AP+VVS+T LM+AY G + + + R M+ G
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 81 PEPSALTYQIILKTFVEGNKFKEA-----EEVFEP----LLSDERAPLKPDQKMFHMMIY 131
P+ +TY +I K G K + E +FE L E + PDQ ++ +I
Sbjct: 569 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK----IYDQMQRSGLQ 187
+ + A +M R + S+ TYN L+ Y + K IY +Q +
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY-SLQEQNVS 687
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+Y LI A+ E A+ +F ++L G
Sbjct: 688 LSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G +EA + M G +P++V+++ ++ + G+++ A ++ M P++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T+ +L + EA + + L+S D +++++I Y K+G E+A ++F
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETL---DIVLYNIVIDGYAKSGCIEEALELF 491
Query: 147 SLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
++ + I S T+NSL+ N E KI D ++ GL P VVSY L++AY
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 204 RREEEALAVFEEMLDAGV 221
+ + EM G+
Sbjct: 552 GNTKSIDELRREMKAEGI 569
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 4 WLRTQHWWDF--SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYG 61
+LRT W D S + +++ + K G + A+ + K G P+V SH L+
Sbjct: 209 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 268
Query: 62 RGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKP 121
G A + M G EP ++TY I+ K F A EV +L L P
Sbjct: 269 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG---LSP 325
Query: 122 DQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM----SFETNYKEVSKI 177
D + +++ + GN + + M R +++ S+M E +
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 178 YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
++QM+ GL PD+V+Y+++I+ K + + AL +++EM D
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 42/232 (18%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G+ EA ++ + MNK G P+ V++ L + + G + A + R M G P +TY
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330
Query: 89 QIIL------------------------------------KTFVEGNKFKEAEEVFEPLL 112
I+L + + EA +F +
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 113 SDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM---SFET 169
+D L PD + ++I+ K G ++ A ++ M + I ++ T+ +L+ +
Sbjct: 391 ADG---LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Query: 170 NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
E + D + SG D+V Y ++I+ Y K+ EEAL +F+ +++ G+
Sbjct: 448 MLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 15/210 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K G EA ++ + + G P+V + +L+ Y + A I ++ G
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN-- 138
PS ++Y ++ + K +E+ + ++ P + + K N
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 139 -------YEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIY---DQMQRSGLQP 188
+EK ++ M IP +TYN+++ + K +S + + M+ L
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 189 DVVSYALLINA---YGKARREEEALAVFEE 215
+Y +LI++ YG R+ + + +E
Sbjct: 654 SSATYNILIDSLCVYGYIRKADSFIYSLQE 683
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI H K G+F A +++ M G+ PN+ ++ A +++ + R A + + + G
Sbjct: 1000 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 1059
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E +TY I+++ + N +A F + + + D ++ +++I + + +
Sbjct: 1060 LEADGVTYTILIQEQCKQNDINQALAFFCRM---NKTGFEADMRLNNILIAAFCRQKKMK 1116
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
++ ++F L+ + + TY S++S ++ K + M+R G PD +Y LI
Sbjct: 1117 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 1176
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ K +EA ++E M+D G+
Sbjct: 1177 SGLCKKSMVDEACKLYEAMIDRGL 1200
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM-QTL 79
LI K+G+ +A ++L M + G+ PNV +HTAL++ + G A +F ++ ++
Sbjct: 894 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+P+ TY ++ + + +K AE +F + + L P+ + +I + KAG++
Sbjct: 954 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM---KEQGLFPNVNTYTTLINGHCKAGSF 1010
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRS---GLQPDVVSYALL 196
+A ++ +LM + TYN+ + + Y+ + ++ GL+ D V+Y +L
Sbjct: 1011 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 1070
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
I K +ALA F M G
Sbjct: 1071 IQEQCKQNDINQALAFFCRMNKTG 1094
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + G EA++ LT M + G+ P+ + T ++ A G N A FR+M LG
Sbjct: 824 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 883
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ + + ++ + K+A E+ E ++ R KP+ +I K G E
Sbjct: 884 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV---RNGWKPNVYTHTALIDGLCKRGWTE 940
Query: 141 KARKMFSLMTQREIPHSTV-TYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
KA ++F + + + V TY S++ E ++ +M+ GL P+V +Y L
Sbjct: 941 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 1000
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
IN + KA A + M D G
Sbjct: 1001 INGHCKAGSFGRAYELMNLMGDEG 1024
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 5/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++TA + G N A M +G+ PN+++ T+L++ + G A + M G
Sbjct: 859 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 918
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ T+ ++ + ++A +F L+ + KP+ + MI Y K
Sbjct: 919 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD--TYKPNVHTYTSMIGGYCKEDKLN 976
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQ---RSGLQPDVVSYALLI 197
+A +FS M ++ + + TY +L++ + Y+ M G P++ +Y I
Sbjct: 977 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 1036
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
++ K R EA + + G+
Sbjct: 1037 DSLCKKSRAPEAYELLNKAFSCGL 1060
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 55 ALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD 114
++ + GR N A + MQ G PS++T +L+ VE + AE VF+ +
Sbjct: 753 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM--- 809
Query: 115 ERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV 174
+ PD + +M+ + G ++A + + M QR T +++ V
Sbjct: 810 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 869
Query: 175 SKI---YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
++ + +M G +P+++++ LI+ K ++A + EEM+ G
Sbjct: 870 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 918
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
KQG +EA ++L+ M G PNVVS+ +M + R + A +F + G +P+
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY I++ + + A EV + S + ++ + ++ +I K G KAR++
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTS---SNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 147 S-LMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGK 202
+ ++ ++ + S ++YNS++ E Y++M +G+ P+V++Y L+N K
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 203 ARREEEALAVFEEMLDAGV 221
R ++AL + +EM + GV
Sbjct: 632 NNRMDQALEMRDEMKNKGV 650
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LIT H K + A + M K G +PN V+ + L+E + + G A +++M+ LG
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS I++ +++G K +EA ++F+ A + + + ++ K G +
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA----NVFVCNTILSWLCKQGKTD 460
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ S M R I + V+YN++M + N ++ + GL+P+ +Y++LI
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + E+ AL V M + +
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNI 544
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A KQGN ++A ++ M G + NVV+ T+L+ + + +A +F +M+ G
Sbjct: 310 VILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEG 369
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P P+++T+ ++++ F + + ++A E ++ + E L P H +I + K +E
Sbjct: 370 PSPNSVTFSVLIEWFRKNGEMEKALEFYKKM---EVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K+F + + + V N+++S+ + E +++ +M+ G+ P+VVSY ++
Sbjct: 427 EALKLFDESFETGLANVFVC-NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + + + A VF +L+ G+
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGL 509
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K+G + A M G +PNV+++T+LM + R + A + M+ G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ Y ++ F + + + A +F LL + L P Q +++ +I +R GN
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEE---GLNPSQPIYNSLISGFRNLGNMV 706
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ M + + TY +L+ + N S++Y +MQ GL PD + Y +++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 198 NAYGKARREEEALAVFEEM 216
N K + + + +FEEM
Sbjct: 767 NGLSKKGQFVKVVKMFEEM 785
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 84/182 (46%), Gaps = 6/182 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+ N A + + + + G P+ + +L+ + G A ++++M G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
TY ++ ++ A E++ + + L PD+ ++ +++ K G +
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEM---QAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K KMF M + + + + YN++++ E N E +++D+M G+ PD ++ +L+
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 198 NA 199
+
Sbjct: 837 SG 838
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K N + K+ M PNV+S+ +L+ GG+ + A ++ +M + G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +TY ++ F + + KEA ++F + P +M++M+I Y K G +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV---PTTRMYNMLIDAYCKLGKID 418
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ M + I TYN L + N + K++DQ+ GL PD+V++ +L+
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILM 477
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
Y + +A + +EM G+
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGL 501
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY---GRGGRYNNAEAIFRRMQ 77
+I A K G N+A ++ M G +PNVVS+ L++ Y G G+ A+A+ + M
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
P+ T+ I++ F + + + +VF+ +L + +KP+ ++ +I G
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD---VKPNVISYNSLINGLCNGG 345
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMS-FETN--YKEVSKIYDQMQRSGLQPDVVSYA 194
+A M M + + +TYN+L++ F N KE ++ ++ G P Y
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
+LI+AY K + ++ A+ EEM G+
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGI 432
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K EA + + G P + L++AY + G+ ++ A+ M+ G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY ++ + A+++F+ L S PD FH+++ Y + G
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL----PDLVTFHILMEGYCRKGESR 487
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSG-LQPDVVSYALL 196
KA + M++ + +TYN +M E N K + + QM++ L+ +V SY +L
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
+ Y + + E+A + EML+ G+
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + GN A+K+ + G P++V+ LME Y R G A + + M +G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P LTY I++K + + K A + + + R L+ + +++++ Y + G E
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR--LRMNVASYNVLLQGYSQKGKLE 558
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDV 190
A + + M ++ + + +TY E+ K ++M G PD+
Sbjct: 559 DANMLLNEMLEKGLVPNRITY-----------EIVK--EEMVDQGFVPDI 595
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
N + L+ AY R+ F+R G + SAL+ + ++ ++ N+ + E V+
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
+ ++ R ++P+ F+++I K G KAR + M + V+YN+L+
Sbjct: 212 KEMI---RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 169 TNYKEVSKIY------DQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
K+Y +M + + P++ ++ +LI+ + K ++ VF+EMLD V
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + G +EAEK+ M G PNV +++ +++A R G+ + A +F M G
Sbjct: 261 LVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG 320
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A+T+ +++ V+ + ++ +V+ + ++ +PD ++ +I + + N E
Sbjct: 321 CAPNAITFNNLMRVHVKAGRTEKVLQVYNQM---KKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A K+ + M +++ + T+N++ + ++V+ ++Y +M + +P+ V+Y +L+
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ ++ + L + +EM D V
Sbjct: 438 RMFVGSKSTDMVLKMKKEMDDKEV 461
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A + G + A + M G APN ++ LM + + GR ++ +M+ LG
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP +TY +++ + A +V ++ + + + F+ + K +
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENAVKVLNTMI---KKKCEVNASTFNTIFRYIEKKRDVN 412
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKE---VSKIYDQMQRSGLQPDVVSYALLI 197
A +M+S M + + +TVTYN LM K V K+ +M ++P+V +Y LL+
Sbjct: 413 GAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLV 472
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ A +F+EM++
Sbjct: 473 TMFCGMGHWNNAYKLFKEMVE 493
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I GK F+ A ++ M ++ + T L+ Y R G + A F RM+ G
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P + + I++ + EA+ F+ L + +PD ++ ++ + +AG
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQSFFDSL----KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
+A K+F M I + TY+ ++ ++S+ +D M SG P+ +++ L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ KA R E+ L V+ +M G
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGC 356
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K G+ +AEK+L+ M + G P++ ++ L+ Y + + A ++ RM+ G
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY + F + +EA +F + D A + + +I Y + + +
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTA----NHVTYTTLIDGYCRMNDID 324
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ +M R VTYNS+ + + +E +++ +M ++PD ++ LI
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
NAY K A+ V ++M+++G+
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGL 408
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 96/176 (54%), Gaps = 8/176 (4%)
Query: 48 PNVVSH--TALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAE 105
P VSH + LM Y + G N++ +F ++++ G +P ++L + V+
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 106 EVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
++F+ ++ + + + +++++++ K+G+ EKA K+ S M ++ + TYN+L+
Sbjct: 189 KIFKKMV---KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLI 245
Query: 166 SF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
S ++ + E + D+M+RSG+ P++V+Y I+ + + R EA +F E+ D
Sbjct: 246 SVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD 301
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 7/205 (3%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ-T 78
R+I+ +GK G F A+K+ M +V+S AL+ AY +++ E +F +
Sbjct: 114 RIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGK 173
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
L +P ++Y ++K E + EA + + + E LKPD F+ ++ G
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEI---ENKGLKPDIVTFNTLLLSSYLKGQ 230
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
+E ++++ M ++ + TYN+ ++ E KE+ ++ +++ SGL+PDV S+
Sbjct: 231 FELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNA 290
Query: 196 LINAYGKARREEEALAVFEEMLDAG 220
+I + +EA A ++E++ G
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHG 315
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 9/226 (3%)
Query: 1 ILEWLRTQHWWDFSEMDSIR---LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALM 57
++EW+ Q D D + L+ + + G + +++ M + G++P+ ++ L+
Sbjct: 237 LIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILL 296
Query: 58 EAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERA 117
G+G + A M+ +G +PS L Y ++ + + + ++ +A
Sbjct: 297 HILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMV---KA 353
Query: 118 PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEV 174
+PD + +MI Y +G +KA++MF MT + + TYNS+ + ++E
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 413
Query: 175 SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ +M+ G P+ V Y+ L++ KA + EA V EM+ G
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 77/201 (38%), Gaps = 35/201 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + G + +++ M + G+ + L+ + G G A F + +T
Sbjct: 155 LMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFN 214
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +Y IL + + ++K E V++ +L D PD ++++++ + G +
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED---GFSPDVLTYNILLWTNYRLGKMD 271
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
+ ++F D+M R G PD +Y +L++
Sbjct: 272 RFDRLF--------------------------------DEMARDGFSPDSYTYNILLHIL 299
Query: 201 GKARREEEALAVFEEMLDAGV 221
GK + AL M + G+
Sbjct: 300 GKGNKPLAALTTLNHMKEVGI 320
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ-T 78
R+I +G+ G F A+K+ M + +S AL+ A +++ E IF+ +
Sbjct: 111 RIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGK 170
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
L EP +Y ++K F EA + + + E LKPD F+++++ G
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEI---ENKGLKPDHITFNILLHESYTKGK 227
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
+E+ ++++ M ++ + +YN+ ++ E +E+ ++D+++ + L+PDV ++
Sbjct: 228 FEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTA 287
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
+I + + +EA+ ++E+ G
Sbjct: 288 MIKGFVSEGKLDEAITWYKEIEKNGC 313
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
Y+ ++ KF+ EE+ E + P + +I +Y + G +E A+K+F
Sbjct: 73 VYERTVRRLAAAKKFEWVEEILE---EQNKYPNMSKEGFVARIINLYGRVGMFENAQKVF 129
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKE---VSKIYDQMQ-RSGLQPDVVSYALLINAYGK 202
M +R + +++N+L++ N K+ V I+ ++ + ++PDV SY LI
Sbjct: 130 DEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCG 189
Query: 203 ARREEEALAVFEEMLDAGV 221
EA+A+ +E+ + G+
Sbjct: 190 KGSFTEAVALIDEIENKGL 208
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+G + A +L M ++V + ++++G+ G+ + A F ++ G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK-------------------- 120
+P +TY ++ + N+ EA E+FE L + R P
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 121 ------------PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
P ++ ++ RK G ++A K+F M + P+ + TYN L+
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLS-TYNILIDML 387
Query: 169 TNYKEVSKIY---DQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
++ + D MQ++GL P+V + ++++ K+++ +EA A+FEEM
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 15 EMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR 74
E+ +I K +EA ++ ++ K P ++ ++ YG G+++ A ++
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 75 RMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYR 134
R + G PS + Y IL + K EA +VFE + D P+ ++++I M
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA----APNLSTYNILIDMLC 388
Query: 135 KAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVV 191
+AG + A ++ M + + + T N + + E ++++M PD +
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 192 SYALLINAYGKARREEEALAVFEEMLDA 219
++ LI+ GK R ++A V+E+MLD+
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 99/205 (48%), Gaps = 8/205 (3%)
Query: 22 ITAHG--KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
I HG K G NE ++ M + G + ++ +++ + + G+ N A + M+T
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G EP+ +TY ++ + ++ EA +FE S ++ + ++ +I + K G
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR---IELNVVIYSSLIDGFGKVGRI 673
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALL 196
++A + + Q+ + + T+NSL+ +E+++ + M+ P+ V+Y +L
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
IN K R+ +A ++EM G+
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGM 758
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 7/201 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I +G G F+EA +L G P+V+++ ++ + G+ + A +F M+
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-D 372
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY I++ K A FE S ++A L P+ + ++M+ K+ +
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTA---FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+A MF M + +T+ SL+ V K+Y++M S + + + Y LI
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ R+E+ ++++M++
Sbjct: 490 KNFFNHGRKEDGHKIYKDMIN 510
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
NVV +++L++ +G+ GR + A I + G P+ T+ +L V+ + EA F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF- 167
+ + + P+Q + ++I K + KA + M ++ + ST++Y +++S
Sbjct: 716 QSM---KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 168 --ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEE 215
N E ++D+ + +G PD Y +I R +A ++FEE
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI GK G +EA IL + + G PN+ + +L++A + N A F+ M+ L
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY I++ + KF +A ++ + ++ +KP + MI KAGN
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEM---QKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLI 197
+A +F + YN+++ +N + ++++ +R GL + +L+
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ K E+A V + + G
Sbjct: 840 DTLHKNDCLEQAAIVGAVLRETG 862
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 37/235 (15%)
Query: 18 SIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ 77
I ++ K E ++ M K + P ++T L+ A+ + +F++MQ
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD----------------------- 114
LG EP+ + +++ F + + A + + + S
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 115 ---------ERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS-LMTQREIPHSTVTYNS- 163
E LKPD+ + MI + KA ++A +MF L R +P T YN+
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP-CTYAYNTM 314
Query: 164 LMSFET--NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
+M + + + E + ++ + G P V++Y ++ K + +EAL VFEEM
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 17 DSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM 76
+S+ L+ A + NF+ ++IL M+ G+ P+V + ++ + + + + M
Sbjct: 102 NSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
+ P+ Y ++ F N +F+ + + +P +F +I + K
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM---QELGYEPTVHLFTTLIRGFAKE 216
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSY 193
G + A + M + V YN + +V K + +++ +GL+PD V+Y
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 194 ALLINAYGKARREEEALAVFEEM 216
+I KA R +EA+ +FE +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHL 299
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 41/245 (16%)
Query: 15 EMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR 74
E+ LI GK G ++A K+ M N + +T+L++ + GR + I++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 75 RM--QTLGPE---------------------------------PSALTYQIILKTFVEGN 99
M Q P+ P A +Y I++ +
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI--- 563
Query: 100 KFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTV 159
K A E +E S + D + ++++I + K G KA ++ M + + V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 160 TYNSLMSFETNYKEVSKIY---DQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
TY S++ + + Y ++ + ++ +VV Y+ LI+ +GK R +EA + EE+
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 217 LDAGV 221
+ G+
Sbjct: 684 MQKGL 688
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K+G+ A + M G P+ V++ ++++ +G+ GR ++ F M+ +
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP +TY ++ F + K E + + + LKP+ + ++ + K G +
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGN---GLKPNVVSYSTLVDAFCKEGMMQ 252
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K + M + + + TY SL+ N + ++ ++M + G++ +VV+Y LI
Sbjct: 253 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 312
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ A R +EA +F +M AGV
Sbjct: 313 DGLCDAERMKEAEELFGKMDTAGV 336
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K+G +A K M ++G PN ++T+L++A + G ++A + M +G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E + +TY ++ + + KEAEE+F + + A + P+ ++ +I+ + KA N +
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKM---DTAGVIPNLASYNALIHGFVKAKNMD 357
Query: 141 KARKMFSLMTQREIPHSTVTYNS----LMSFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+A ++ + + R I + Y + L S E + + ++M+ G++ + + Y L
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLE-KIEAAKVVMNEMKECGIKANSLIYTTL 416
Query: 197 INAYGKARREEEALAVFEEM 216
++AY K+ E L + +EM
Sbjct: 417 MDAYFKSGNPTEGLHLLDEM 436
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G EA + + M + P S L+ + + G+ ++ + F+ M G P+ TY
Sbjct: 74 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 133
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
I++ + + A +FE + + L PD ++ MI + K G + F
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEM---KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 190
Query: 149 MTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARR 205
M +TYN+L++ + ++ + Y +M+ +GL+P+VVSY+ L++A+ K
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 206 EEEALAVFEEMLDAGV 221
++A+ + +M G+
Sbjct: 251 MQQAIKFYVDMRRVGL 266
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 5/191 (2%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A+ ++ M + G N + +T LM+AY + G + M+ L E + +T+ +++
Sbjct: 394 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 453
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
+ +A + F + +D L+ + +F MI K E A +F M Q+
Sbjct: 454 GLCKNKLVSKAVDYFNRISND--FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 511
Query: 154 IPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
+ Y SLM + N E + D+M G++ D+++Y L+ + ++A
Sbjct: 512 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 571
Query: 211 AVFEEMLDAGV 221
+ EEM+ G+
Sbjct: 572 SFLEEMIGEGI 582
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K G ++ ++ M G P V ++ +++ + G A +F M+ G
Sbjct: 101 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 160
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ F + + + FE + + +PD ++ +I + K G
Sbjct: 161 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM---KDMCCEPDVITYNALINCFCKFGKLP 217
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ + M + + V+Y++L+ E ++ K Y M+R GL P+ +Y LI
Sbjct: 218 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 277
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+A K +A + EML GV
Sbjct: 278 DANCKIGNLSDAFRLGNEMLQVGV 301
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 83 PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKA 142
P + + ++ +EA + F + +R + P + + +++ + K G +
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKM---KRFRVFPKTRSCNGLLHRFAKLGKTDDV 114
Query: 143 RKMFSLMTQREIPHSTVTYN---SLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
++ F M + TYN M E + + ++++M+ GL PD V+Y +I+
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174
Query: 200 YGKARREEEALAVFEEMLD 218
+GK R ++ + FEEM D
Sbjct: 175 FGKVGRLDDTVCFFEEMKD 193
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG------------------------ 63
+G EA + M KMG P+ +++ L++A+ +
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 64 -----------GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLL 112
R +A F + EP +TY ++ + + EAE +FE L
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL- 662
Query: 113 SDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYK 172
+ P P+ ++I++ K + + A +MFS+M ++ + VTY LM + +
Sbjct: 663 --KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 173 EVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 219
++ K++++MQ G+ P +VSY+++I+ K R +EA +F + +DA
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A ++L+ + G APNVV+ L+ + + G + A +F+ M+ G EP + Y ++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
+ + ++F L +K D +F I +Y K+G+ A ++ M +
Sbjct: 330 GYFKAGMLGMGHKLFSQAL---HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 154 IPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
I + VTY L + + E +Y Q+ + G++P +V+Y+ LI+ + K
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 211 AVFEEMLDAG 220
A++E+M+ G
Sbjct: 447 ALYEDMIKMG 456
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
+A K + + P++V++ ++ Y R + AE IF ++ P+ +T I++
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
+ N A +F +++++ + KP+ + ++ + K+ + E + K+F M ++
Sbjct: 679 HVLCKNNDMDGAIRMFS-IMAEKGS--KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 153 EIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEA 209
I S V+Y+ + + E + I+ Q + L PDVV+YA+LI Y K R EA
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 210 LAVFEEMLDAGV 221
++E ML GV
Sbjct: 796 ALLYEHMLRNGV 807
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
I + K G+ A + M G +PNVV++T L++ + GR A ++ ++ G
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
EPS +TY ++ F + + ++E ++ + PD ++ +++ K G
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMI---KMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 142 ARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
A + M + I + V +NSL+ + E K++ M G++PDV ++ ++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 199 AYGKARREEEALAVFEEMLDAGV 221
R EEAL +F M G+
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGL 562
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ KQG A + M NVV +L++ + R R++ A +FR M G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P T+ +++ + + +EA +F + + L+PD + +I + K
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMF---KMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETN-YKEVSKIYDQMQRSGLQPDVVSYALLI 197
++F LM + +I N ++ F+ + ++ SK ++ + ++PD+V+Y +I
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 198 NAYGKARREEEALAVFE 214
Y RR +EA +FE
Sbjct: 644 CGYCSLRRLDEAERIFE 660
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G K+ + G +VV ++ ++ Y + G A +++RM G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY I++K + + EA ++ +L + ++P + +I + K GN
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL---KRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
++ M + P V Y L +S + + +M ++ +VV + LI
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 198 NAYGKARREEEALAVFEEM 216
+ + + R +EAL VF M
Sbjct: 504 DGWCRLNRFDEALKVFRLM 522
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K + + A ++ + M + G PN V++ LM+ + + + +F MQ G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS ++Y II+ + + EA +F + A L PD + ++I Y K G
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID---AKLLPDVVAYAILIRGYCKVGRLV 793
Query: 141 KARKMFSLM 149
+A ++ M
Sbjct: 794 EAALLYEHM 802
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ K G +AE + +YM+K+G P++V++ L+ Y AE + M G
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ A +Y +LK + ++ + ++ + D + +I + +A N
Sbjct: 286 IQLDAYSYNQLLKRHC---RVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA ++F M Q+ + + VTY SL+ E N K+ DQM GL PD + Y ++
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ K+ ++A VF +M++
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIE 423
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 7/206 (3%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
R I+ K F+ + +L+ M +G+ P++ + ++ R + A F M
Sbjct: 84 RFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQR 143
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G EP ++Y I++ K +A E++ ++ R+ + PD K ++ A
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAMI---RSGVSPDNKACAALVVGLCHARKV 200
Query: 140 EKARKMFS-LMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYAL 195
+ A +M + + + STV YN+L+S + K + M + G +PD+V+Y +
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
L+N Y + A V EM+ +G+
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGI 286
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
+VVS++ L+E + R A +F M+ G + +TY ++K F+ A+++
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
+ + L PD+ + ++ K+GN +KA +F+ M + EI ++YNSL+S
Sbjct: 384 DQM---TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 169 TNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
V+ K+++ M+ PD +++ +I + ++ A V+++M+D G
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A ++GN + A+K+L M ++G +P+ + +T +++ + G + A +F M
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
P A++Y ++ + EA ++FE + E PD+ F +I
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC---PDELTFKFII 472
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
+EA ++ M + G PN+ ++T L+++ ++ A + +M G P+ +TY +
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
+ + + ++A +V E + E L P+ + ++ +I Y K+ N KA + + M +
Sbjct: 400 INGYCKRGMIEDAVDVVELM---ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLE 455
Query: 152 REIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
R++ VTYNSL+ + N+ ++ M GL PD +Y +I++ K++R EE
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 209 ALAVFEEMLDAGV 221
A +F+ + GV
Sbjct: 516 ACDLFDSLEQKGV 528
Score = 78.2 bits (191), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 102/196 (52%), Gaps = 6/196 (3%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
+ N ++A +L M + P+VV++ +L++ R G +++A + M G P T
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y ++ + + + +EA ++F+ L E+ + P+ M+ +I Y KAG ++A M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSL---EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 148 LMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
M + +++T+N+L + + KE + + ++M + GLQP V + +LI+ K
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 205 REEEALAVFEEMLDAG 220
+ A + F++ML +G
Sbjct: 617 DFDHAYSRFQQMLSSG 632
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 11 WDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAE 70
W ++ M I + K EA + + + G PNVV +TAL++ Y + G+ + A
Sbjct: 498 WTYTSM-----IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 71 AIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
+ +M + P++LT+ ++ K KEA + E ++ + L+P ++I
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV---KIGLQPTVSTDTILI 609
Query: 131 YMYRKAGNYEKARKMFSLMTQ---REIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQ 187
+ K G+++ A F M + H+ T+ E + + +M+ +G+
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
PD+ +Y+ LI YG + A V + M D G
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 19/219 (8%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
I + ++G +AE ++ M + G +P++ ++++L++ YG G+ N A + +RM+ G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 81 PEPSALTYQIILKTFVEGNKFK---------------EAEEVFEPLLSDERAPLKPDQKM 125
EPS T+ ++K +E K E + V E L + P+ K
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 126 FHMMIYMYRKAGNYEKARKMFSLMTQRE-IPHSTVTYNSLMSFETNYK---EVSKIYDQM 181
+ +I + GN A K+F M + E I S + +N+L+S K E +K+ D M
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 182 QRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
G P + S +LI K +E +VF+ +L G
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Score = 50.4 bits (119), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y +L + E ++V+ +L D+ + P+ ++ M+ Y K GN E+A + S
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDK---VCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 148 LMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKAR 204
+ + + TY SL+ K++ K++++M G + + V+Y LI+ AR
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 205 REEEALAVFEEMLD 218
R +EA+ +F +M D
Sbjct: 303 RIDEAMDLFVKMKD 316
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + + G +E +++ M + PN+ ++ ++ Y + G A ++ G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK---PDQKMFHMMIYMYRKAG 137
+P TY ++ + + A +VF + PLK ++ + +I+ A
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM------PLKGCRRNEVAYTHLIHGLCVAR 302
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYA 194
++A +F M E + TY L+ E + +M+ +G++P++ +Y
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
+LI++ + E+A + +ML+ G+
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGL 389
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + +A + M KMG +VV T L++ + A + +RM+ G
Sbjct: 19 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 78
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ + + +AE + S + + P+ F +I Y K G
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK---INPNVITFSALIDAYAKRGKLS 135
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K ++ +M Q I + TY+SL + E K+ D M G P+VV+Y+ L
Sbjct: 136 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLA 195
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N + K+ R ++ + + ++M GV
Sbjct: 196 NGFFKSSRVDDGIKLLDDMPQRGV 219
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LIT K G +AE+ L M+ PNV++ +AL++AY + G+ + +++++ M +
Sbjct: 89 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 148
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ TY ++ N+ EA ++ + ++S P+ + + + K+ +
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS---KGCTPNVVTYSTLANGFFKSSRVD 205
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVS-KIYDQMQRSGLQPDVVSYALLI 197
K+ M QR + +TV+ N+L+ F+ +++ ++ M +GL P++ SY +++
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 265
Query: 198 NAYGKARREEEALAVFEEM 216
E+AL+ FE M
Sbjct: 266 AGLFANGEVEKALSRFEHM 284
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A ++L M G +PNVV++++L+ + GR +AE M + P+ +T+ ++
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
+ + K + + V++ ++ + + P+ + +IY ++A KM LM +
Sbjct: 127 AYAKRGKLSKVDSVYKMMI---QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 154 IPHSTVTYNSLMS--FETN-YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
+ VTY++L + F+++ + K+ D M + G+ + VS LI Y +A + + AL
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 211 AVFEEMLDAGV 221
VF M G+
Sbjct: 244 GVFGYMTSNGL 254
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 7/201 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYM-NKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
L++A+ +EA K + K+G P++V++ +++A R G ++ +IF ++
Sbjct: 163 LLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKN 222
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G EP +++ +L+ F F E + +++ + S L P+ + ++ + + +
Sbjct: 223 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKN---LSPNIRSYNSRVRGLTRNKKF 279
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
A + +M I TYN+L++ + N +EV K Y++M+ GL PD V+Y +L
Sbjct: 280 TDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCML 339
Query: 197 INAYGKARREEEALAVFEEML 217
I K + A+ V EE +
Sbjct: 340 IPLLCKKGDLDRAVEVSEEAI 360
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 9/227 (3%)
Query: 1 ILEWLRTQHWWDF--SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALME 58
I E L+ Q +D SE IR++ +G G A K+ M ++ V S AL+
Sbjct: 106 IDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLS 165
Query: 59 AYGRGGRYNNAEAIFRRM-QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERA 117
AY + + A F+ + + LG P +TY ++K + +FE L E+
Sbjct: 166 AYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEEL---EKN 222
Query: 118 PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS-- 175
+PD F+ ++ + + + + +++ LM + + + +YNS + T K+ +
Sbjct: 223 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDA 282
Query: 176 -KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ D M+ G+ PDV +Y LI AY EE + + EM + G+
Sbjct: 283 LNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K G+ A +I+ M + GY P+V ++ +++ + G A + +M T
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ T + N+ +EA E+ L S + PD F+ +I N+
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTS---KGILPDVCTFNSLIQGLCLTRNHR 417
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++F M + TYN L + + E + QM+ SG V++Y LI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + KA + EA +F+EM GV
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGV 501
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 22 ITAHG--KQGNFNEAEKILTYM-NKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
+ HG K+G +A + M N+ G+ P+ + L+ + G +A I M
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G +P TY ++ + + KEA EV + +++ + P+ ++ +I K
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD---CSPNTVTYNTLISTLCKENQ 380
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
E+A ++ ++T + I T+NSL + N++ +++++M+ G +PD +Y +
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
LI++ + +EAL + ++M +G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGC 466
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 30 NFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
N A ++ M G P+ ++ L+++ G+ + A + ++M+ G S +TY
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
++ F + NK +EAEE+F+ + E + + ++ +I K+ E A ++ M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEM---EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 150 TQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARRE 206
TYNSL++ + K+ + I M +G +PD+V+Y LI+ KA R
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 207 EEA 209
E A
Sbjct: 592 EVA 594
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+T + G+ +A I+ M G P++V++ L+ + GR A + R +Q G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN-- 138
+ Y +++ K EA +F +L AP PD + ++ G
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP--PDAVSYRIVFRGLCNGGGPI 663
Query: 139 YEKARKMFSLMTQREIPHSTVTY---NSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
E + L+ + +P + Y L++ V + MQ++ + VS
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVS--- 720
Query: 196 LINAYGKARREEEALAVFEEMLDA 219
++ K R+ ++ALA +LD+
Sbjct: 721 MVKGLLKIRKFQDALATLGGVLDS 744
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ + K G+ AEK+ M + N VS TAL+ Y R G N A +FR+M LG
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPE----KNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P T+ L + +E+ ++ R ++P+ + +I MY K+G+ E
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMI---RTNVRPNAIVISSLIDMYSKSGSLE 363
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALLI 197
+ ++F + + H V +N+++S + + ++ D M + +QP+ + +++
Sbjct: 364 ASERVFRICDDK---HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 198 NAYGKARREEEALAVFEEM 216
NA + EE L FE M
Sbjct: 421 NACSHSGLVEEGLRWFESM 439
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 99/193 (51%), Gaps = 2/193 (1%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G+ EAE++ M +G +VVS+++++ Y +GG N +F RM+ EP Y
Sbjct: 241 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 300
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
++ + + EA + + + +E ++P+ ++ +I KA E+A+++F
Sbjct: 301 NAVVHALAKASFVSEARNLMKTM--EEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 358
Query: 149 MTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
M ++ + + TY++ M +EV ++ +M++ G +P V +Y +LI + R +
Sbjct: 359 MLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDN 418
Query: 209 ALAVFEEMLDAGV 221
L +++EM + V
Sbjct: 419 VLLLWDEMKEKTV 431
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+ F +A L +M K G+ P+V S++ ++ + G+ ++A +F M G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P Y I++ F++ K A E+++ LL D + + P+ K ++MI K G +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED--SSVYPNVKTHNIMISGLSKCGRVD 272
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K++ M Q E TY+SL + N + +++++ DVV+Y ++
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Query: 198 NAYGKARREEEALAVFEEM 216
+ + + +E+L ++ M
Sbjct: 333 GGFCRCGKIKESLELWRIM 351
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ EA L M K G P VVS+ L+ + G++ A A + M G +P
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY I+L K A E++ L ++ L+ D M +++I+ G + A +
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFL---QSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 147 SLMTQREIPHSTVTYNSLMS--FET-NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
+ M R + VTYN+LM F+ + + I+ M + GLQPD++SY ++
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652
Query: 204 RREEEALAVFEEMLDAGV 221
R A+ F++ + G+
Sbjct: 653 RGVSYAMEFFDDARNHGI 670
Score = 73.9 bits (180), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 55 ALMEAYGRGGRYNNAEAIFRRMQTL-GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLS 113
++++ YG+ + A +F+RM+ + G EP+ +Y +L FVE ++ + E +F
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF-- 140
Query: 114 DERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETN 170
E A + P+ + ++++I M K +EKAR M + +Y+++ ++
Sbjct: 141 -ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK 199
Query: 171 YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
+ +++D+M G+ PDV Y +LI+ + K + + A+ +++ +L+
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+ K G ++ KI M + ++ ++++L+ G + AE++F +
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+TY +L F K KE+ E++ + + ++++I + G +
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVS----YNILIKGLLENGKID 376
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A ++ LM + TY + V+K + +++ SG DV +YA +I
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ K +R EEA + +EM GV
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGV 460
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
PNV +H ++ + GR ++ I+ RM+ E TY ++ + +AE V
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
F L DER D ++ M+ + + G +++ +++ +M + + V+YN L+
Sbjct: 313 FNEL--DERKA-SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKG 368
Query: 167 FETNYK--EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
N K E + I+ M G D +Y + I+ +AL V +E+ +G
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 105/204 (51%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + G EA+ +L MN+ G+ P++V +T L+ Y G+ +A + R M+ G
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+A Y ++++ + ++ +EA +VF + ER + D + ++ + K G +
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEM---ERYECEADVVTYTALVSGFCKWGKID 374
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K + M ++ + S +TY +M + +++E ++ ++M++ PD+ Y ++I
Sbjct: 375 KCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
K +EA+ ++ EM + G+
Sbjct: 435 RLACKLGEVKEAVRLWNEMEENGL 458
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 95/209 (45%), Gaps = 6/209 (2%)
Query: 16 MDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRR 75
+D L++ + G +A +L M + G+ PN +T L++A + R A +F
Sbjct: 288 VDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVE 347
Query: 76 MQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRK 135
M+ E +TY ++ F + K + V + ++ + L P + + ++ + K
Sbjct: 348 MERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI---KKGLMPSELTYMHIMVAHEK 404
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVS 192
++E+ ++ M Q E YN ++ KE +++++M+ +GL P V +
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT 464
Query: 193 YALLINAYGKARREEEALAVFEEMLDAGV 221
+ ++IN EA F+EM+ G+
Sbjct: 465 FVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 54 TALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLS 113
L++ + A + M G EP + +L + K+A ++FE
Sbjct: 187 VVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFE---- 242
Query: 114 DERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKE 173
D R + + F ++Y + + G +A+ + M + V Y +L+S N +
Sbjct: 243 DMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGK 302
Query: 174 VSKIYD---QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
++ YD M+R G +P+ Y +LI A K R EEA+ VF EM
Sbjct: 303 MADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
I K G A K M + +PNVV+ T L++ Y + G A ++++ M+ +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
+ +TY ++ F + + + AEE++ ++ D ++P+ ++ +I + + G+ +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR---VEPNSLVYTTIIDGFFQRGDSDN 286
Query: 142 ARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLIN 198
A K + M + + Y ++S KE ++I + M++S L PD+V + ++N
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 199 AYGKARREEEALAVFEEMLDAG 220
AY K+ R + A+ ++ ++++ G
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERG 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 36 KILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTF 95
K L Y+ GY P+ S +++ + G+ AE I M G EP ++Y ++
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 96 VEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIP 155
+ A V E L + KPD F+ + + K ++ +M + P
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP 161
Query: 156 HSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAV 212
+ VTY++ + E+ K + M+R L P+VV++ LI+ Y KA E A+++
Sbjct: 162 N-VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 213 FEEM 216
++EM
Sbjct: 221 YKEM 224
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 36/215 (16%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+ G EA +I+ M K P++V T +M AY + GR A ++ ++ G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 81 PEPSALT------------------------------YQIILKTFVEGNKFKEAEEVFEP 110
EP + Y +++ + F E E +F
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSK 428
Query: 111 LLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSF 167
+ A L PD+ M+ I K GN A K+ + M Q + + Y +L ++
Sbjct: 429 I---SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLAS 485
Query: 168 ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGK 202
+ E +++D+M SG+ PD + LLI AY K
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEK 520
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G+ A + M ++ + NVV++TAL++ + + G AE ++ RM
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP++L Y I+ F + A + +L+ ++ D + ++I G +
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ---GMRLDITAYGVIISGLCGNGKLK 320
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETN-YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ M + ++ V + ++M+ F++ K +Y ++ G +PDVV+ + +I
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 198 NAYGKARREEEALAVF 213
+ K + EA+ F
Sbjct: 381 DGIAKNGQLHEAIVYF 396
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 43/235 (18%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAI-------------- 72
K G AE I+ M + G P+V+S+ +L++ + R G +A +
Sbjct: 68 KLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKP 127
Query: 73 -----------FRRMQTL------------GPEPSALTYQIILKTFVEGNKFKEAEEVFE 109
F +M+ L P+ +TY + TF + + + A + F
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187
Query: 110 PLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET 169
+ +R L P+ F +I Y KAG+ E A ++ M + + + VTY +L+
Sbjct: 188 SM---KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 170 NYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
E+ + +Y +M ++P+ + Y +I+ + + + A+ +ML+ G+
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K+G+F E E++ + +++ G P+ +T+ + + G +A + RM G
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
L Y ++ EA +VF+ +L+ + + PD +F ++I Y K GN
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN---SGISPDSAVFDLLIRAYEKEGNMA 525
Query: 141 KARKMFSLMTQR 152
A + M +R
Sbjct: 526 AASDLLLDMQRR 537
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
AEK + M G N ++ ++ G+Y A ++ R M G P TY +L
Sbjct: 391 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 450
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
+K + A +FE + +R L D + +M+ + KAG E+ARK F+ M +
Sbjct: 451 YLCNASKMELAFLLFEEM---KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 507
Query: 154 IPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
+ VTY +L+ K+VS ++++ M G P++V+Y+ LI+ + KA + E+A
Sbjct: 508 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 567
Query: 211 AVFEEM 216
+FE M
Sbjct: 568 QIFERM 573
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/214 (22%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + K G +A K M ++G PNVV++TAL+ AY + + + A +F M + G
Sbjct: 483 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 542
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP-------------LKPDQKMFH 127
P+ +TY ++ + + ++A ++FE + + P +P+ +
Sbjct: 543 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 602
Query: 128 MMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRS 184
++ + K+ E+ARK+ M+ + + Y++L+ E ++ +M
Sbjct: 603 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 662
Query: 185 GLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
G + +Y+ LI+ Y K +R++ A V +ML+
Sbjct: 663 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 696
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 22/199 (11%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M + G +V ++T +++++ + G A F M+ +G P+ +TY ++ +++ K
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT-QREIPH--- 156
A E+FE +LS+ P+ + +I + KAG EKA ++F M +++P
Sbjct: 528 VSYANELFETMLSEG---CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 584
Query: 157 ------------STVTYNSLMS-FETNYK--EVSKIYDQMQRSGLQPDVVSYALLINAYG 201
+ VTY +L+ F +++ E K+ D M G +P+ + Y LI+
Sbjct: 585 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 644
Query: 202 KARREEEALAVFEEMLDAG 220
K + +EA V EM + G
Sbjct: 645 KVGKLDEAQEVKTEMSEHG 663
Score = 67.0 bits (162), Expect = 9e-12, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 57/255 (22%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM---- 76
LI A+ K + A ++ M G PN+V+++AL++ + + G+ A IF RM
Sbjct: 518 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 577
Query: 77 ------------QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQK 124
P+ +TY +L F + ++ +EA ++ + + +P+Q
Sbjct: 578 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM---SMEGCEPNQI 634
Query: 125 MFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVS------- 175
++ +I K G ++A+++ + M++ P + TY+SL+ F+ ++++
Sbjct: 635 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694
Query: 176 -----------------------------KIYDQMQRSGLQPDVVSYALLINAYGKARRE 206
K+ M+ G QP+VV+Y +I+ +G +
Sbjct: 695 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 754
Query: 207 EEALAVFEEMLDAGV 221
E L + E M GV
Sbjct: 755 ETCLELLERMGSKGV 769
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A K+L+ M + APNVV +T +++ + G+ + A + + M+ G +P+ +TY ++
Sbjct: 687 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 746
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
F K + E+ E + S A P+ + ++I K G + A + M Q
Sbjct: 747 GFGMIGKIETCLELLERMGSKGVA---PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 803
Query: 154 IPHSTVTYNSLMS-FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAV 212
P T Y ++ F + E + D++ + P + Y LLI+ KA+R E AL +
Sbjct: 804 WPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 863
Query: 213 FEEM 216
EE+
Sbjct: 864 LEEV 867
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 35 EKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKT 94
+++L M G P+ +L+ AY G ++ A + ++M G P + Y I++ +
Sbjct: 316 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 375
Query: 95 FVEGNK-------FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
G+K AE+ + +L+ K + F + AG YEKA +
Sbjct: 376 IC-GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC---SAGKYEKAFSVIR 431
Query: 148 LMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKAR 204
M + T TY+ ++++ N ++ ++++M+R GL DV +Y ++++++ KA
Sbjct: 432 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 491
Query: 205 REEEALAVFEEMLDAG 220
E+A F EM + G
Sbjct: 492 LIEQARKWFNEMREVG 507
Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K EA K+L M+ G PN + + AL++ + G+ + A+ + M G
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ TY ++ + + + A +V +L + A P+ ++ MI K G +
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA---PNVVIYTEMIDGLCKVGKTD 720
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKI------YDQMQRSGLQPDVVSYA 194
+A K+ +M ++ + VTY +++ + + KI ++M G+ P+ V+Y
Sbjct: 721 EAYKLMQMMEEKGCQPNVVTYTAMID---GFGMIGKIETCLELLERMGSKGVAPNYVTYR 777
Query: 195 LLINAYGKARREEEALAVFEEM 216
+LI+ K + A + EEM
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEM 799
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 15/203 (7%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G + EA LT + + P+ V +T L+ + A RM+ P+ +
Sbjct: 241 KVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 297
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY +L + + + V ++ + P K+F+ +++ Y +G++ A K+
Sbjct: 298 TYSTLLCGCLNKKQLGRCKRVLNMMMMEG---CYPSPKIFNSLVHAYCTSGDHSYAYKLL 354
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKE---------VSKIYDQMQRSGLQPDVVSYALLI 197
M + V YN L+ K+ K Y +M +G+ + ++ +
Sbjct: 355 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 414
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
A + E+A +V EM+ G
Sbjct: 415 RCLCSAGKYEKAFSVIREMIGQG 437
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 9/208 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMG---YAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ 77
LI +G G + ++L M + G PN+ + L++A+ + + A + ++M+
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 78 TLGPEPSALTYQIILKTFVE-GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
G P +TY I +V+ G + EV E ++ E+A KP+ + +++ Y +
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA--KPNGRTCGIVVGGYCRE 273
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYKE-VSKIYDQMQRSGLQPDVVSY 193
G + M + + + V +NSL++ E ++ + ++ M+ ++ DV++Y
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITY 333
Query: 194 ALLINAYGKARREEEALAVFEEMLDAGV 221
+ ++NA+ A E+A VF+EM+ AGV
Sbjct: 334 STVMNAWSSAGYMEKAAQVFKEMVKAGV 361
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 13/181 (7%)
Query: 35 EKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKT 94
+++LT M + +V++++ +M A+ G A +F+ M G +P A Y I+ K
Sbjct: 315 DEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 374
Query: 95 FVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREI 154
+V + K+AEE+ E L+ + R P+ +F +I + G+ + A ++F+ M + +
Sbjct: 375 YVRAKEPKKAEELLETLIVESR----PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 430
Query: 155 PHSTVTYNSLMSFETNYKEVSK------IYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
+ T+ +LM Y EV + + M+ G++P+ ++ LL A+ A +E
Sbjct: 431 SPNIKTFETLM---WGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 487
Query: 209 A 209
+
Sbjct: 488 S 488
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
V S T LM GR + A+ +F+ + G PS ++Y +L ++ +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM--- 165
+ E++ K D F+ +I + ++GN E A + M + + +T TYN+L+
Sbjct: 104 SEV---EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 166 SFETNYKEVSKIYDQMQRSG---LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ S++ D M G + P++ ++ +L+ A+ K ++ EEA V ++M + GV
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGV 219
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+L+ ++G +EA+ + + + G+ P+++S+T L+ A +Y + +I ++
Sbjct: 50 KLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G + ++ + ++ F E ++A + LL + L P ++ +I Y AG
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDA---VQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 140 EKARKMFSLMTQR---EIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSY 193
E++ ++ LM + ++ + T+N L+ K+V + ++ +M+ G++PD V+Y
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 194 ALLINAY---GKARREEEALAVFEEML 217
+ Y G+ R E V E+M+
Sbjct: 227 NTIATCYVQKGETVRAES--EVVEKMV 251
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A Q + I++ + + G + + A++ A+ G +A +M+ LG
Sbjct: 86 LLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG 145
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY ++K + K + + E+ + +L + + P+ + F++++ + K E
Sbjct: 146 LNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF-----ETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
+A ++ M + + TVTYN++ + ET E + + + +P+ + +
Sbjct: 206 EAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI 265
Query: 196 LINAYGKARREEEALAVFEEM 216
++ Y + R + L M
Sbjct: 266 VVGGYCREGRVRDGLRFVRRM 286
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 5/204 (2%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
R++ ++ + G +A K+LT M + G PN++ ++ + R R A RMQ +
Sbjct: 247 RVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVV 306
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P+ +TY +++ + + ++ +EA E+ E + S P K + +M Y+ ++
Sbjct: 307 GIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK--VSYYTIMGYLCKEKRIV 364
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALL 196
E M + + + VTYN+L+ T + + Q G + D + Y+ +
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
++A K R EA + EML G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKG 448
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
+ ++L M + G + + +M +Y R G+ +A + MQ G EP+ L +
Sbjct: 226 SRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
FV N+ ++A E + + + P+ ++ MI Y E+A ++ M +
Sbjct: 286 VFVRANRLEKALRFLERM---QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKG 342
Query: 154 IPHSTVTYNSLMSFETNYKEVSKIYDQMQR----SGLQPDVVSYALLINAYGKARREEEA 209
V+Y ++M + K + ++ D M++ GL PD V+Y LI+ K +EA
Sbjct: 343 CLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA 402
Query: 210 LAVFEEMLDAG 220
L ++ + G
Sbjct: 403 LWFLKDAQEKG 413
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + G ++A+K+L M+ G+ PN VS+TAL+ R G+ A R M +
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA----REMMNMS 515
Query: 81 PE----PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK---PDQKMFHMMIYMY 133
E P+++TY +I+ K EA +V ++ LK P ++++
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV------LKGFFPGPVEINLLLQSL 569
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDV 190
+ G +ARK + + V + +++ E+ + D M DV
Sbjct: 570 CRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 629
Query: 191 VSYALLINAYGKARREEEALAVFEEMLDAGV 221
+Y L++ GK R EA + ++ML G+
Sbjct: 630 FTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAP-NVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
++ A K+G +EA+ ++ M G+ P +VV++TA++ + R G + A+ + + M T
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G +P+ ++Y +L K EA E+ +S+E P+ + ++++ R+ G
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMN--MSEEHW-WSPNSITYSVIMHGLRREGKL 540
Query: 140 EKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+A + M + V N L + + E K ++ G +VV++ +
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 197 INAYGKARREEEALAVFEEM 216
I+ + + + AL+V ++M
Sbjct: 601 IHGFCQNDELDAALSVLDDM 620
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 78.2 bits (191), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 8/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A K G+F EA I M G PN V++TA++ + G N AE + +MQ +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 81 PEPSALTYQIILKTFVEGN-KFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P+ +TY L +G ++A E+ +L L + ++M+I + + G
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG----LLANTATYNMLIRGFCRQGRI 803
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
E+A ++ + M + +TY ++++ + K+ ++++ M G++PD V+Y L
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I+ A +A + EML G+
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGL 888
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
SE L+ K+G EA ++ + G +PN+ + AL+++ +G +++ AE +F
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
RM +G P+ +TY I++ F K A ++ LK ++ +I +
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD---TGLKLSVYPYNSLINGH 447
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDV 190
K G+ A + M +++ + VTY SLM + +++K +Y +M G+ P +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 191 VSYALLINAYGKARREEEALAVFEEMLDAGV 221
++ L++ +A +A+ +F EM + V
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 33 EAEKILTYMNKM---GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
E E L M++M ++P+ + ++L+E + G+ A + +R+ G P+ Y
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
++ + +G KF EAE +F+ + + L+P+ + ++I M+ + G + A M
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRM---GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 150 TQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARRE 206
+ S YNSL++ + ++S +M L+P VV+Y L+ Y +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 207 EEALAVFEEMLDAGV 221
+AL ++ EM G+
Sbjct: 489 NKALRLYHEMTGKGI 503
Score = 60.5 bits (145), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + +G N+A ++ M G AP++ + T L+ R G +A +F M
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ +TY ++++ + E +A FE L + PD + +I+ G
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKA---FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A+ + + + + Y L+ E +E + +M + G+ D+V Y +LI
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ K + + + +EM D G+
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGL 678
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 30 NFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
+ + A++++ +M G N+V + L++ + + A I + + +P +TY
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
++ + +F+ E+ + +L P + ++ RK G E+A + +
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLC---LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 150 TQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARRE 206
+ + YN+L+ + E ++D+M + GL+P+ V+Y++LI+ + + +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 207 EEALAVFEEMLDAGV 221
+ AL+ EM+D G+
Sbjct: 419 DTALSFLGEMVDTGL 433
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 37 ILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFV 96
+L M+ G P+ V +T++++A + G + A I+ M G P+ +TY ++
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 97 EGNKFKEAEEVFEPLLSDERAPLK--PDQKMFHMMIYMYRKAG-NYEKARKMFSLMTQRE 153
+ EAE +L + P+ P+Q + + + K + +KA ++ + + +
Sbjct: 729 KAGFVNEAE-----VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KG 782
Query: 154 IPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
+ +T TYN L+ + +E S++ +M G+ PD ++Y +IN + ++A+
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 211 AVFEEMLDAGV 221
++ M + G+
Sbjct: 843 ELWNSMTEKGI 853
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
+E+ +I K G NEAE + + M + PN V++ ++ +G
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
G + TY ++++ F + +EA E+ ++ D + PD + MI
Sbjct: 776 HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG---VSPDCITYTTMINEL 832
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPD 189
+ + +KA ++++ MT++ I V YN+L+ + +++ ++M R GL P+
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
KQG + A L M + G PNVV + +M A+ R + A +IF M G EP+
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY I++ F + + A +V + + + ++ +++ +I K G KA++M
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQM---NASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 147 -SLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGK 202
+L+ ++ S +YNS++ + + Y +M +G P+VV++ LIN + K
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Query: 203 ARREEEALAVFEEM 216
+ R + AL + EM
Sbjct: 638 SNRMDLALEMTHEM 651
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A K+GN EA +++ M G +V++ T+L+ Y +G A +F RM+ G
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P + + ++++ F K E E+ E + + + P + H MI KA + E
Sbjct: 376 LAPDKVMFSVMVEWFC---KNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF--ETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
A ++F+ + I H + + F + + M++ G++P+VV Y ++
Sbjct: 433 AALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMML 492
Query: 199 AYGKARREEEALAVFEEMLDAGV 221
A+ + + + A ++F EML+ G+
Sbjct: 493 AHCRMKNMDLARSIFSEMLEKGL 515
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Query: 31 FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQI 90
+EA++I M +G A + V+ LM A R + A IFRR+ + G EP L + +
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSL 279
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
++ + A ++ + P Q+ + +I + K GN E+A ++ M
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVP--ASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
Query: 151 QREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREE 207
IP S + SL++ E+ K ++++M+ GL PD V +++++ + K E
Sbjct: 338 GFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEME 397
Query: 208 EALAVFEEM 216
+A+ + M
Sbjct: 398 KAIEFYMRM 406
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+ + A + + + ++G PNV + +L+ + G+ + A ++++M G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
TY ++ ++ A +++ LL + PD+ + +++ K G +
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLD---LGIVPDEILHMVLVNGLSKKGQFL 782
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA KM M ++++ + + Y+++++ E N E +++D+M G+ D + LL+
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Query: 198 NA 199
+
Sbjct: 843 SG 844
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ AH + N + A I + M + G PN +++ L++ + + NA + +M
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E + + Y I+ + + +A+E+ + L+ ++R + ++ +I + K G+ +
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS--YNSIIDGFVKVGDTD 607
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVS-KIYDQMQRSGLQPDVVSYALLI 197
A + + M++ + VT+ SL++ ++N +++ ++ +M+ L+ D+ +Y LI
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + K + A +F E+ + G+
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGL 691
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 99/239 (41%), Gaps = 41/239 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K G+ + A + M++ G +PNVV+ T+L+ + + R + A + M+++
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ Y ++ F + N K A +F L L P+ +++ +I +R G +
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSEL---PELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 141 KARKMFSLMTQREIPHSTVTYNSL------------------------------------ 164
A ++ M I TY ++
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Query: 165 --MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+S + + + SK+ ++M++ + P+V+ Y+ +I + + EA + +EML+ G+
Sbjct: 773 NGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ + + A M P V ++ + R + A+ I+ +M +G
Sbjct: 175 LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIG 234
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+T Q++++ + K +EA ++F ++S R +PD +F + + K +
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS--RGA-EPDGLLFSLAVQAACKTPDLV 291
Query: 141 KARKMFSLMTQR-EIPHSTVTYNS-LMSF--ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
A + M + +P S TY S +++F E N +E ++ D+M G+ V++ L
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
+N Y K +AL +F M + G+
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGL 376
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K+G A ++L M G PNV S+T L++ + + G+ + A + M G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ + + ++ F + ++ EA E+F + R KPD F+ +I + +
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREM---PRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A + M + +TVTYN+L++ KE K+ ++M G D ++Y LI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+A ++A ++FE+ML G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDG 594
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K G +EA +L M+ G PN V L+ A+ + R A IFR M G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P T+ ++ E ++ K A + ++S+ + + ++ +I + + G +
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG---VVANTVTYNTLINAFLRRGEIK 546
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSG------------ 185
+ARK+ + M + P +TYNSL+ EV K ++++M R G
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 186 -----------------------LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
PD+V++ LIN +A R E+ L +F ++ G+
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K NEA ++L M MG P+ + ++ + R N A + RM G
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY ++ + + A+++F R P KP+ +F+ +I+ + G +
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFY------RIP-KPEIVIFNTLIHGFVTHGRLD 370
Query: 141 KARKMFS-LMTQREIPHSTVTYNSLMSFETNYKE-----VSKIYDQMQRSGLQPDVVSYA 194
A+ + S ++T I TYNSL+ +KE ++ M+ G +P+V SY
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIY--GYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
+L++ + K + +EA V EM G+
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 44/228 (19%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
NEA K++ M G+AP+ +++ LM + GR + A+ +F R+ P+P + + +
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTL 359
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG-------------- 137
+ FV + +A+ V +++ + PD ++ +IY Y K G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTS--YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 138 ---------------------NYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKE 173
++A + + M+ + +TV +N L+S E E
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 174 VSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+I+ +M R G +PDV ++ LI+ + + AL + +M+ GV
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 6/187 (3%)
Query: 37 ILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFV 96
+L M G N V++ L+ A+ R G A + M G +TY ++K
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 97 EGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPH 156
+ +A +FE +L D A P +++I ++G E+A + M R
Sbjct: 576 RAGEVDKARSLFEKMLRDGHA---PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 157 STVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
VT+NSL++ + ++ ++Q G+ PD V++ L++ K +A +
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 214 EEMLDAG 220
+E ++ G
Sbjct: 693 DEGIEDG 699
Score = 50.4 bits (119), Expect = 8e-07, Method: Composition-based stats.
Identities = 50/224 (22%), Positives = 80/224 (35%), Gaps = 42/224 (18%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+ W +Q+ + S LI G G F +++L M G ++M Y
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY 156
Query: 61 GRGGRYNNAEAIFRRMQTL-GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPL 119
+ G + M+ + EP+ +Y ++L+ V GN K A VF +LS
Sbjct: 157 DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS------ 210
Query: 120 KPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---K 176
R+IP + T+ +M E+
Sbjct: 211 --------------------------------RKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 177 IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ M + G P+ V Y LI++ K R EAL + EEM G
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K G +A+ ++ M +MG +PN VS+ L++ + A +F M G
Sbjct: 162 LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYG 221
Query: 81 PEPSALTYQIIL-----KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRK 135
P+ +T II+ K + N K EE+ + S APL D + +++ K
Sbjct: 222 IRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS--SQANAPL--DIVICTILMDSCFK 277
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVS 192
GN +A +++ M+Q+ +P +V YN ++ + + Y M + G+ PDV +
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337
Query: 193 YALLINAYGKARREEEALAVFEEMLDAGV 221
Y LI+A K + +EA + M + GV
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGV 366
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+A K+G F+EA + M G AP+ +S+ +++ G N A M
Sbjct: 341 LISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSS 400
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P L + +++ + A V +LS +KP+ + +I+ Y K G
Sbjct: 401 LLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS---YGVKPNVYTNNALIHGYVKGGRLI 457
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A + + M +I T TYN L+ + ++YD+M R G QPD+++Y L+
Sbjct: 458 DAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
R ++A ++ + G+
Sbjct: 518 RGLCWKGRLKKAESLLSRIQATGI 541
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
G+ N A + L M K P V+ +++ YGR G ++A ++ M + G +P+ T
Sbjct: 383 HGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYT 442
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
++ +V+G + +A V + S + + PD +++++ G+ A +++
Sbjct: 443 NNALIHGYVKGGRLIDAWWVKNEMRSTK---IHPDTTTYNLLLGAACTLGHLRLAFQLYD 499
Query: 148 LMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
M +R +TY L + ++ K+ + ++Q +G+ D V + +L Y + +
Sbjct: 500 EMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQ 559
Query: 205 REEEALAVFEEML 217
R EA V+++ L
Sbjct: 560 RPGEAYLVYKKWL 572
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT-- 78
++++ ++G +++EK++ M + G P++V+ + + A + G+ +A IF M+
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 79 -LG-PEPSALTYQIILKTFVEGNKFKEAEEVFEPLL-SDERAPLKPDQKMFHMMIYMYRK 135
LG P P+++TY ++LK F + ++A+ +FE + +D+ A L+ +++ + +
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS----YNIWLQGLVR 338
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVS 192
G + +A + MT + I S +YN LM +S I M+R+G+ PD V+
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 193 YALLINAYGKARREEEALAVFEEML 217
Y L++ Y + + A ++ +EM+
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMM 423
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPE---- 82
K G +EAE++L MN+ GY + V+ +++ G + A I + M+ G
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 83 -------------------PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
P +TY +L + +F EA+ +F ++ ++ L+PD
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK---LQPDS 559
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQ 180
+++ I+ + K G A ++ M ++ S TYNSL + + E+ + D+
Sbjct: 560 VAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDE 619
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
M+ G+ P++ +Y I + + E+A + +EM+ +
Sbjct: 620 MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ G F EAE +L M G P++ S+ LM+ + G ++A+ I M+ G P A+
Sbjct: 338 RHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAV 397
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY +L + K A+ + + ++ R P+ +++++ K G +A ++
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMM---RNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVSK--------------------------IYDQ 180
M ++ TVT N ++ E+ K + D
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+ + PD+++Y+ L+N KA R EA +F EM+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM 551
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P+V + L+E+ + R +++ M G P T+ ++++ + + A E+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 167
F+ + KP++ F +++ Y KAG +K ++ + M + + V YN+++S
Sbjct: 170 FDEM---PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226
Query: 168 ---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
E + K+ ++M+ GL PD+V++ I+A K + +A +F +M
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P++++++ L+ + GR+ A+ +F M +P ++ Y I + F + K A V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 167
+ + E+ + ++ +I + + M ++ I + TYN+ + +
Sbjct: 582 LKDM---EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 168 ETNYKEV---SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
++V + + D+M + + P+V S+ LI A+ K + A VFE
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
KQG + A ++L M K G ++ ++ +L+ G + + M+ G P+
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++ EG K ++A + + ++ A P+ F +I + K +++ A+++F
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIA---PNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 147 ----SLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGK 202
S+ Q+E +S + +N L++ K +++ + + G + Y L+ + K
Sbjct: 688 ETAVSICGQKEGLYS-LMFNELLAAGQLLK-ATELLEAVLDRGFELGTFLYKDLVESLCK 745
Query: 203 ARREEEALAVFEEMLDAG 220
E A + +M+D G
Sbjct: 746 KDELEVASGILHKMIDRG 763
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G + E ++ M + G +PN+ ++ ++ G + +A + M
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +++ +++ F + F A+EVFE +S + ++ +M AG
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVS----ICGQKEGLYSLMFNELLAAGQLL 715
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQMQRSGLQPDVVSYALLI 197
KA ++ + R T Y L+ E+ S I +M G D + +I
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVI 775
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ GK ++EA + ++M++
Sbjct: 776 DGLGKMGNKKEANSFADKMME 796
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 89/224 (39%), Gaps = 23/224 (10%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + G + A+ +L M + PN + L+ + + GR + AE + R+M G
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK-------------------- 120
+T II+ + +A E+ + + A L
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KI 177
PD + ++ KAG + +A+ +F+ M ++ +V YN + ++S ++
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 178 YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
M++ G + +Y LI G + E + +EM + G+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 11 WDFSEMDSI----------RLITAHGKQGNFNEA-EKILTYMNKMG----YAPNVVSHTA 55
W FSEM + LITAH + +A EK+ Y++KM PNVV++
Sbjct: 154 WLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNI 213
Query: 56 LMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDE 115
L+ A+ + G+ + A+F+ + P T+ ++ + + KE E V + S+E
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 116 RAPLKPDQKMFHMMIYMYRKAGNYEKARKMF-SLMTQREIPHSTVTYNSLMSFETNYKEV 174
KPD F+++I Y K +EK + F SLM +E P + T+NS++ + +
Sbjct: 274 ---CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP-TLPTFNSMIINYGKARMI 329
Query: 175 SK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
K ++ +M P ++Y +I YG A +FEE+
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 107/226 (47%), Gaps = 11/226 (4%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+ W++ Q W+ +LI+ GK+G A + + M G P+ + AL+ A+
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 61 ----GRGGRYNNAEAIFRRMQTL-GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDE 115
+ +M+ + +P+ +TY I+L+ F + K + +F+ L +
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL---D 235
Query: 116 RAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYK 172
+P+ PD F+ ++ Y K G ++ + + M E +T+N L+ + ++
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 173 EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
++ + + + RS +P + ++ +I YGKAR ++A VF++M D
Sbjct: 296 KMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A + G ++ + ++ +P+V + +M+AYG+ G EA+ RM++
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD------------------ 122
+P +T+ +++ ++ + +F++ E+ F+ L+ + P P
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 123 ---QKM-----------FHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
+KM + MI MY G+ +AR++F + + + T N+++
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVY 393
Query: 169 TN---YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
Y E K++ + PD +Y L AY KA +E+ + ++M G+
Sbjct: 394 CRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 44/242 (18%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K F++A ++ M + P+VV++T+ +EAY + G + + M+ G
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY I++ + + + EA V+E + D PD K + +I++ K G ++
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED---GCVPDAKFYSSLIHILSKTGRFK 395
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF-------ETNYKEVSKIYDQ------------- 180
A ++F MT + + + YN+++S E + + ++ D+
Sbjct: 396 DAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYA 455
Query: 181 ---------------------MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 219
M ++ + DV +Y LLI + + EEA FEE +
Sbjct: 456 PLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRK 515
Query: 220 GV 221
G+
Sbjct: 516 GM 517
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 83/207 (40%), Gaps = 45/207 (21%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHT--ALMEAYGRGGRYNNAEAIFRRMQ- 77
++ GK NF+ +++ MNK + V T +M + G+YN A F M+
Sbjct: 172 MVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEK 231
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
+ G + + ++ V+ N + A EVF L +KPD + F+++I+ + KA
Sbjct: 232 SYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD----TIKPDARTFNILIHGFCKAR 287
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
++ AR M LM E PDVV+Y +
Sbjct: 288 KFDDARAMMDLMKVTE--------------------------------FTPDVVTYTSFV 315
Query: 198 NAY---GKARREEEALAVFEEMLDAGV 221
AY G RR E L EEM + G
Sbjct: 316 EAYCKEGDFRRVNEML---EEMRENGC 339
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + QG +A ++ M G +P+++++ L+ R G I+ RM+ G
Sbjct: 429 LIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG 488
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP---------------LKPDQKM 125
P+P+A+T +I++ K KEAE+ F L +++ P K K
Sbjct: 489 PKPNAVTNSVIIEGLCFARKVKEAEDFFSSL--EQKCPENKASFVKGYCEAGLSKKAYKA 546
Query: 126 FHMMIYMYRKA------------GNYEKARKMFSLMTQREI-PHSTVTYNSLMSF--ETN 170
F + Y RK+ G EKA + M+ + P ++ + +F N
Sbjct: 547 FVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNN 606
Query: 171 YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+E ++D M GL PD+ +Y ++I+ Y + ++A ++FE+M G+
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 19/174 (10%)
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
G A + ++M EP ++ F + N +EA+ +F+ ++ ER L PD
Sbjct: 570 GYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV--ERG-LIPDL 626
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---------------- 167
+ +MI+ Y + +KA +F M QR I VTY L+
Sbjct: 627 FTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQG 686
Query: 168 ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
E ++ S++ + +G+ DVV Y +LI+ K E+A +F+ M+D+G+
Sbjct: 687 EVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
++I A K N EA+ + M + G P++ ++T ++ Y R AE++F M+
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G +P +TY ++L +++ L P+ H + + G
Sbjct: 656 GIKPDVVTYTVLLDRYLK---------------------LDPEH---HETCSVQGEVGK- 690
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFE---TNYKEVSKIYDQMQRSGLQPDVVSYALL 196
KA ++ + I V Y L+ + N ++ ++++D+M SGL+PD+V+Y L
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 197 INAYGKARREEEALAVFEEM 216
I++Y + + A+ + E+
Sbjct: 751 ISSYFRKGYIDMAVTLVTEL 770
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYM--NKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
LI +GK G E+ ++L M ++M PN + L++A+ + A I +MQ+
Sbjct: 430 LIKGYGKIGKLEESSRLLDMMLRDEM-LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G +P +T+ + K + AE++ P + + +KP+ + ++ Y + G
Sbjct: 489 YGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK--VKPNVRTCGTIVNGYCEEGK 546
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKE---VSKIYDQMQRSGLQPDVVSYAL 195
E+A + F M + + + +NSL+ N + V ++ D M+ G++PDVV+++
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606
Query: 196 LINAY---GKARREEEALAVFEEMLDAGV 221
L+NA+ G +R EE ++ +ML+ G+
Sbjct: 607 LMNAWSSVGDMKRCEE---IYTDMLEGGI 632
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAE-AIFRRMQTL 79
L+ A Q EA I+ M G P+VV+ L +AY R G AE I RM
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+P+ T I+ + E K +EA F + + + P+ +F+ +I + +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM---KELGVHPNLFVFNSLIKGFLNINDM 582
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+ ++ LM + + VT+++LM S + K +IY M G+ PD+ ++++L
Sbjct: 583 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
Y +A E+A + +M GV
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGV 667
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + ++G EA + M ++G PN+ +L++ + + + M+ G
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +T+ ++ + K EE++ +L + PD F ++ Y +AG E
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML---EGGIDPDIHAFSILAKGYARAGEPE 653
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQR-SGLQPDVVSYALL 196
KA ++ + M + + + V Y ++S + E+ K +Y +M GL P++ +Y L
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 197 INAYGKARREEEALAVFEEM 216
I +G+A++ +A + ++M
Sbjct: 714 IWGFGEAKQPWKAEELLKDM 733
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
+V S T LM GR A +IF + G +PS +TY ++ F +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
+ E+ LKPD +F+ +I ++GN ++A K+F M + + T+N+L+
Sbjct: 378 SKV---EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 169 ---TNYKEVSKIYDQMQRSG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+E S++ D M R LQP+ + +L+ A+ R+ EEA + +M GV
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGV 491
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 7/201 (3%)
Query: 21 LITAHGKQGNFNEAEK-ILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
L A+ + G+ AE I+ M PNV + ++ Y G+ A F RM+ L
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P+ + ++K F+ N EV + + E +KPD F ++ + G+
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM---EEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALL 196
++ ++++ M + I ++ L E K I +QM++ G++P+VV Y +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 197 INAYGKARREEEALAVFEEML 217
I+ + A ++A+ V+++M
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMC 698
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A G+ E+I T M + G P++ + + L + Y R G AE I +M+ G
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ + Y I+ + + K+A +V++ + L P+ + +I+ + +A
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG--IVGLSPNLTTYETLIWGFGEAKQPW 724
Query: 141 KARKMFSLMTQREI 154
KA ++ M + +
Sbjct: 725 KAEELLKDMEGKNV 738
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL- 79
L + + G +AE+IL M K G PNVV +T ++ + G A ++++M +
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG-- 137
G P+ TY+ ++ F E + +AEE+ + + E + P +K ++ ++ G
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDM---EGKNVVPTRKTMQLIADGWKSIGVS 758
Query: 138 NYEKARKM---FSLMTQREIPHSTVTYNS 163
N A + FS ++ IP++ + S
Sbjct: 759 NSNDANTLGSSFSTSSKLNIPNNIASSRS 787
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
+A ++L M + G PN+ ++ +++ + R G+ +A F M+ E +TY ++
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
F + K A VF+ ++ R + P ++ MI + K N E A MF M +R
Sbjct: 273 HGFGVAGEIKRARNVFDEMI---REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 153 EIPHSTVTYNSLMSFETNYKEVSKIYDQMQR---SGLQPDVVSYALLINAYGKARREEEA 209
+ TYN L+ + E S+ + MQR G +P+ +Y ++I Y + E+A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 210 LAVFEEM 216
L +FE+M
Sbjct: 390 LGLFEKM 396
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 7/199 (3%)
Query: 25 HGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPS 84
+ G ++A K+ M++ G ++ S +++ + R A +FR ++
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF-SVD 194
Query: 85 ALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARK 144
+TY +IL + + +A EV + ++ ER + P+ ++ M+ + +AG A +
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMV--ERG-INPNLTTYNTMLKGFFRAGQIRHAWE 251
Query: 145 MFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYG 201
F M +R+ VTY +++ K ++D+M R G+ P V +Y +I
Sbjct: 252 FFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLC 311
Query: 202 KARREEEALAVFEEMLDAG 220
K E A+ +FEEM+ G
Sbjct: 312 KKDNVENAVVMFEEMVRRG 330
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 8 QHWWDF--------SEMDSIR---LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTAL 56
+H W+F E+D + ++ G G A + M + G P+V ++ A+
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 57 MEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDER 116
++ + NA +F M G EP+ TY ++++ +F EE+ + + E
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM---EN 363
Query: 117 APLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS 166
+P+ + ++MMI Y + EKA +F M + + TYN L+S
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ G A + M K +VV++T ++ +G G A +F M G PS
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY +++ + + + A +FE ++ R +P+ ++++I AG + + ++
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMV---RRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 358
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKA 203
M + TYN ++ + + EV K ++++M P++ +Y +LI+
Sbjct: 359 QRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVR 418
Query: 204 RREEE 208
+R E+
Sbjct: 419 KRSED 423
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M + P+ + + E Y G+ + A +F M G ++ IL + +
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
++A E+F L R D +++++ + KA ++ M +R I + T
Sbjct: 177 VEKAYELFRAL----RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 161 YNSLMS--FETN-YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
YN+++ F + + + +M++ + DVV+Y +++ +G A + A VF+EM+
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 218 DAGV 221
GV
Sbjct: 293 REGV 296
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM-QTL 79
LI ++G G F E+ K+ M +MG +P+V++ +L+ + GR A +F M +T
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P + T+ ++ F + + EA +F+ + E PD ++ +I +AG
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM---ELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 140 EKARKMFSLMTQR--EIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYA 194
+ A + S M ++ ++ + V+Y +L+ + E ++ M GL+P+ V+Y
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 195 LLINAYGKARREEE 208
LI +A R +E
Sbjct: 321 TLIKGLSEAHRYDE 334
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 55 ALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD 114
+L+ +YG G + + +F+ M+ +G PS LT+ +L ++ + A ++F+ +
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM--R 200
Query: 115 ERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV 174
+ PD F+ +I + K ++A ++F M VTYN+++ +V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 175 SKIYDQM-----QRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
++ + + + + P+VVSY L+ Y + +EA+ VF +ML G+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL 312
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMG--YAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
+I + G A +L+ M K PNVVS+T L+ Y + A +F M +
Sbjct: 250 IIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS 309
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G +P+A+TY ++K E +++ E +++ +D PD F+++I + AG+
Sbjct: 310 RGLKPNAVTYNTLIKGLSEAHRYDEIKDILIG-GNDAFTTFAPDACTFNILIKAHCDAGH 368
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSF----------ETNYKEVSKIYDQMQRSGLQP 188
+ A K+F M ++ + +Y+ L+ ET + E+ + + + +P
Sbjct: 369 LDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKP 428
Query: 189 DVVSYALL---INAYGKARREEEALAVFEEMLDAGV 221
+Y + + A GK ++ E+ VF +++ GV
Sbjct: 429 LAAAYNPMFEYLCANGKTKQAEK---VFRQLMKRGV 461
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 111 LLSDER---APLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 167
L S ER +K + F+ +I Y AG ++++ K+F M Q I S +T+NSL+S
Sbjct: 123 LFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSI 182
Query: 168 ETNYKEVS---KIYDQMQRS-GLQPDVVSYALLINAYGKARREEEALAVFEEM 216
++D+M+R+ G+ PD ++ LIN + K +EA +F++M
Sbjct: 183 LLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM 235
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM---- 76
LI AH G+ + A K+ M M P+ S++ L+ ++ AE +F +
Sbjct: 359 LIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE 418
Query: 77 QTLGPE---PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
LG + P A Y + + K K+AE+VF L+ +R P + +I +
Sbjct: 419 VLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM--KRGVQDPPS--YKTLITGH 474
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQ---RSGLQPDV 190
+ G ++ A ++ LM +RE TY L+ E +D +Q RS P
Sbjct: 475 CREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 534
Query: 191 VSYALLINAYGKARREEEALAVFEEMLD 218
++ ++ K + E+ + ML+
Sbjct: 535 TTFHSVLAELAKRKFANESFCLVTLMLE 562
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF----RRM 76
L+ + + +EA + M G PN V++ L++ RY+ + I
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF 346
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
T P+ A T+ I++K + A +VF+ +L+ L PD + ++I
Sbjct: 347 TTFAPD--ACTFNILIKAHCDAGHLDAAMKVFQEMLN---MKLHPDSASYSVLIRTLCMR 401
Query: 137 GNYEKARKMFS-------LMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGL 186
+++A +F+ L+ + E YN + + K+ K++ Q+ + G+
Sbjct: 402 NEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV 461
Query: 187 QPDVVSYALLINAYGK 202
Q D SY LI + +
Sbjct: 462 Q-DPPSYKTLITGHCR 476
>AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19763152-19765136 FORWARD
Length = 495
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+ E LR Q W+ + ++LI GK +A ++ M G N +TAL+ AY
Sbjct: 136 VFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAY 195
Query: 61 GRGGRYNNAEAIFRRMQTL-GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD-ERAP 118
R GR++ A + RM++ +P TY I++K+F++ F + ++ LLSD R
Sbjct: 196 SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD----LLSDMRRQG 251
Query: 119 LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNS-LMSFETN--YKEVS 175
++P+ F E + ++ + + + T NS L +F N + +
Sbjct: 252 IRPNTITF------------VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 299
Query: 176 KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
Y++ Q SG++P++ ++ +L+++YGK+ ++ AV E M
Sbjct: 300 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM 340
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 9/206 (4%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
+ A G G E G PN+ + L+++YG+ G Y A+ MQ
Sbjct: 286 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 345
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
+ +TY +++ F K+ E +F L+ ER + P ++ Y +A +K
Sbjct: 346 SWTIVTYNVVIDAFGRAGDLKQMEYLFR-LMQSER--IFPSCVTLCSLVRAYGRASKADK 402
Query: 142 ARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
+ + +I V +N L+ + E+ + + M++ G +PD ++Y ++
Sbjct: 403 IGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVK 462
Query: 199 AY---GKARREEEALAVFEEMLDAGV 221
AY G +E V E + +A V
Sbjct: 463 AYRISGMTTHVKELHGVVESVGEAQV 488
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 103/226 (45%), Gaps = 9/226 (3%)
Query: 1 ILEWLRTQHWWDFSEMDSIR---LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALM 57
+++W+ Q D D + ++ A+ + G + ++L M K G++P++ ++ L+
Sbjct: 240 LIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILL 299
Query: 58 EAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERA 117
G + A + M+ +G EP + + ++ K + + + + +
Sbjct: 300 HHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETV---KV 356
Query: 118 PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEV 174
PD + +MI Y G EKA +MF MT++ + TYNS++ +KE
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 175 SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ +M+ G P+ V Y+ L+N A + EA V ++M++ G
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ +G++G+ + A + M G P +T+L+ AY G + A + R+M+ G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E S +TY +I+ F + + A+ F+ +R + ++ +IY + + N E
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFD---EAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A + M + I Y+++M T + K ++ +++ G P VV+Y LI
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N Y K + +AL V M + GV
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGV 515
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 97/188 (51%), Gaps = 6/188 (3%)
Query: 37 ILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFV 96
+ + + G+ P VV++ L+ Y + G+ + A + R M+ G + + TY +++ FV
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 97 EGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPH 156
+ + A VFE ++ + +KPD +++ +I + GN ++A + M +
Sbjct: 531 KLKDWANAFAVFEDMVKE---GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 157 STVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
+T T+ ++ + + + +++D M+R G P V ++ LIN + R+ E+A+ +
Sbjct: 588 TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 214 EEMLDAGV 221
+EM AGV
Sbjct: 648 DEMTLAGV 655
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ +A +IL M G + N ++T +M+ Y G A F R+Q G
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ TY+ +LK + + + A V + + + + + +++++I + + G+
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN---IPRNSFVYNILIDGWARRGDVW 746
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A + M + + TY S +S + + ++ ++M+ G++P++ +Y LI
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ +A E+AL+ +EEM G+
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGI 830
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K G+ + ++ M + G P V + L+ + A I M G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ TY I++ + +A E F L ++ L D + ++ K+G +
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE---GLDVDIFTYEALLKACCKSGRMQ 711
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A + M+ R IP ++ YN L+ + + E + + QM++ G++PD+ +Y I
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+A KA A EEM GV
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGV 795
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++G+ EA ++ M K G P++ ++T+ + A + G N A M+ LG
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
+P+ TY ++K + + ++A +E + + +KPD+ ++H ++
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEM---KAMGIKPDKAVYHCLL 841
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A +G EAE I + + V + L++A G+ A I+ RM T G
Sbjct: 745 LVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSG 804
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
S TY ++ + G + +A E+F + R+ L D+K++ MI Y K G
Sbjct: 805 VPCSIQTYNTMISVYGRGLQLDKAIEIFS---NARRSGLYLDEKIYTNMIMHYGKGGKMS 861
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +FS M ++ I T +YN ++ + EV ++ M+R+G D+ +Y LI
Sbjct: 862 EALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLI 921
Query: 198 NAYGKARREEEA 209
Y ++ + EA
Sbjct: 922 QVYAESSQFAEA 933
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +G+Q EA+++ + P ++++AY R G +A +F G
Sbjct: 676 LIAVYGRQHKLKEAKRLYLAAGE-SKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKG 734
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P A+T I++ K +EAE + L ++ D ++ +I +AG +
Sbjct: 735 CDPGAVTISILVNALTNRGKHREAEHISRTCLEKN---IELDTVGYNTLIKAMLEAGKLQ 791
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A +++ M +P S TYN+++S ++ K I+ +RSGL D Y +I
Sbjct: 792 CASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMI 851
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
YGK + EAL++F EM G+
Sbjct: 852 MHYGKGGKMSEALSLFSEMQKKGI 875
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 99/204 (48%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+ +G+ ++A +I + + G + +T ++ YG+GG+ + A ++F MQ G
Sbjct: 815 MISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKG 874
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +Y +++K E +E+ + + ER D + +I +Y ++ +
Sbjct: 875 IKPGTPSYNMMVKICATSRLHHEVDELLQAM---ERNGRCTDLSTYLTLIQVYAESSQFA 931
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K +L+ ++ IP S ++SL+S +E + Y +M +G+ PD ++
Sbjct: 932 EAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTIL 991
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
Y E+ + +E+M+ + V
Sbjct: 992 KGYMTCGDAEKGILFYEKMIRSSV 1015
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 43 KMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFK 102
++ Y P+VV +T ++ YG+ G+ AE F M +G EP A+ +L T+ +
Sbjct: 181 QLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH- 239
Query: 103 EAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYN 162
A F + + R L +++ M+ +K + K ++ M + +P + TY
Sbjct: 240 SAMLTFYKAVQERRILLSTS--VYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYT 297
Query: 163 SLMS--FETNYKEVS-KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 219
++S + +KE + K + +M+ G P+ V+Y+ +I+ KA E+A+ ++E+M
Sbjct: 298 LVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQ 357
Query: 220 GV 221
G+
Sbjct: 358 GI 359
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+++++ KQG EA K M +G+ P V++++++ + G + A ++ M++ G
Sbjct: 299 VVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS T +L + + + +A +F + ER + D+ + ++I +Y K G +
Sbjct: 359 IVPSNYTCATMLSLYYKTENYPKALSLFADM---ERNKIPADEVIRGLIIRIYGKLGLFH 415
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
A+ MF + + TY ++ N V K D M+ + +Y +++
Sbjct: 416 DAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVML 475
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
Y K + + A F + G+
Sbjct: 476 QCYAKIQNVDCAEEAFRALSKTGL 499
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 4 WLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG 63
W++ Q + S + ++ +G+ G AE+ M ++G P+ V+ ++ Y R
Sbjct: 177 WMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARW 236
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
GR++ ++ +Q S Y +L + + + + +++ ++ +E P P++
Sbjct: 237 GRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMV-EEGVP--PNE 293
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQ 180
+ +++ Y K G E+A K F M VTY+S++S ++++ +Y+
Sbjct: 294 FTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
M+ G+ P + A +++ Y K +AL++F +M
Sbjct: 354 MRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K+GN NE + IL M K + V+ ++ ++ R G + AE I + LG
Sbjct: 614 KEGNLNETKAILNLMFKTDLGSSAVNR--VISSFVREGDVSKAEMIADIIIRLGLRMEEE 671
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T ++ + +K KEA+ ++ L + E P + + MI Y + G E A +F
Sbjct: 672 TIATLIAVYGRQHKLKEAKRLY--LAAGESKT--PGKSVIRSMIDAYVRCGWLEDAYGLF 727
Query: 147 SLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
++ VT + L++ TN ++E I ++ D V Y LI A +A
Sbjct: 728 MESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEA 787
Query: 204 RREEEALAVFEEMLDAGV 221
+ + A ++E M +GV
Sbjct: 788 GKLQCASEIYERMHTSGV 805
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 45 GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEA 104
G PN ++T ++ +Y + G A F M++LG P +TY ++ V+ +++A
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Query: 105 EEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL 164
++E + S + P M+ +Y K NY KA +F+ M + +IP V +
Sbjct: 348 IGLYEDMRSQ---GIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLI 404
Query: 165 MSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
+ + + ++++ +R L D +Y + + + +AL V E M
Sbjct: 405 IRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMM 459
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ K+G EA + M + G PN+V ++ L++ R G+ N A+ I RM G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A TY ++K F + +EA +V++ + ++ ++ + ++I G +
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM---DKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQM---QRSGLQPDVVSYA 194
+A ++S M I TV Y+S++ + K+Y +M + QPDVV+Y
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
+L++ + A+ + MLD G
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGC 571
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+G+ K++ M G PN V++ L+ G+ + A ++ RM +
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ V K + A + L S E +Q ++ ++I K G E
Sbjct: 323 CIPNDVTYGTLINGLV---KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++ M ++ + V Y+ L + E E +I ++M SG P+ +Y+ L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ K EEA+ V++EM G
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGC 463
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI KQ +A ++L+ M + GY N ++ L+ + G+ A +++R+M G
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ + Y +++ K EA+E+ +++ + P+ + ++ + K G E
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA---SGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +++ M + + Y+ L+ KE ++ +M G++PD V+Y+ +I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 198 NAYGKARREEEALAVFEEML 217
+ AL ++ EML
Sbjct: 510 KGLCGIGSMDAALKLYHEML 529
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 6/180 (3%)
Query: 44 MGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKE 103
M +PN +S +++A + + A +FR M P TY ++ + + E
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 104 AEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNS 163
A + + + S+ P +++++I K G+ + K+ M + + VTYN+
Sbjct: 241 AVLLLDEMQSEG---CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 164 L---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
L + + + + ++M S P+ V+Y LIN K RR +A+ + M + G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K G + A K+ M + P+ ++L+++ G+ GR + + ++ MQ G
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PSA + ++ ++ + K A +++ + +++ +P+ ++ M+I + K+G E
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEM---KKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A +F M + + TY+ L+ +V KIY+ M +GL+P + SY L+
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
R + A + EM G
Sbjct: 496 TLLANKRLVDVAGKILLEMKAMG 518
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTA---LM 57
+ W + Q W+ S+ + L + +F + + M + + +S A ++
Sbjct: 191 LFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVI 250
Query: 58 EAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERA 117
+ + + A F++ Q G + TY ++ F+ +A E++E S E+
Sbjct: 251 QYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYE---SMEKT 307
Query: 118 PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEV 174
D + ++I K+G + A K+F M +R++ S ++SL M
Sbjct: 308 DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 175 SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
K+Y +MQ G +P + LI++Y KA + + AL +++EM +G
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSG 413
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 42/206 (20%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
+ LI ++ K G + A ++ M K G+ PN +T ++E++ + G+ A +F+ M+
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G P+ TY +L+ M+ +G
Sbjct: 447 AGFLPTPSTYSCLLE--------------------------------------MHAGSGQ 468
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQMQRSGLQPDVVSYAL 195
+ A K+++ MT + +Y SL++ N + V KI +M+ G DV + +
Sbjct: 469 VDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDV 528
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
L+ Y K + AL M +G+
Sbjct: 529 LM-IYIKDASVDLALKWLRFMGSSGI 553
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM-QTL 79
LI + G F++A K+ M K P V+ L+ + R A + M +
Sbjct: 158 LIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVY 217
Query: 80 GPEPSALTYQIILKTFVEGNK----FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRK 135
G P+ Y ++K + + FK +E +E +K D ++ +I K
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE-------GKIKVDAAIYSTLISSLIK 270
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVS 192
AG + + M+++ TVTYN L+ E + + +++ D+M GL+PDV+S
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 193 YALLINAYGKARREEEALAVFEEMLDAGV 221
Y +++ + + ++ EEA +FE+M G
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGC 359
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G + ++ L+ +++ G P+ ++ L+ + G +++A +F M +P+ +
Sbjct: 130 KCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
T+ ++ + ++ KEA ++ +L + ++P ++ +I + G A K+
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDML--KVYGVRPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 147 SLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
+ +I Y++L+S EVS I ++M G +PD V+Y +LIN +
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVE 306
Query: 204 RREEEALAVFEEMLDAGV 221
E A V +EM++ G+
Sbjct: 307 NDSESANRVLDEMVEKGL 324
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + + A ++L M + G P+V+S+ ++ + R ++ A +F M G
Sbjct: 299 LINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRG 358
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLL 112
P L+Y+I+ EG +F+EA + + +L
Sbjct: 359 CSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ ++G EA+++L M + G P++V T L+ Y G+ +A + M+ G
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 81 PEPSALTYQIILKTFVEGNK-FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
EP+ Y ++++ K EA VF + ER + D + +I + K G
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM---ERYGCEADIVTYTALISGFCKWGMI 358
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+K + M ++ + S VTY +M + ++E ++ ++M+R G PD++ Y ++
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I K +EA+ ++ EM G+
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGL 443
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG-GRYNNAEAIFRRMQTL 79
L++ + G +A ++ M K G+ PNV +T L++A R R + A +F M+
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G E +TY ++ F + + V + + + + P Q + ++ + K +
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDM---RKKGVMPSQVTYMQIMVAHEKKEQF 393
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALL 196
E+ ++ M +R + YN ++ KE +++++M+ +GL P V ++ ++
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
IN + EA F+EM+ G+
Sbjct: 454 INGFTSQGFLIEACNHFKEMVSRGI 478
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
+A ++L M K G P+ L++A + G A +F M+ P P+ + +L
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP-PNLRYFTSLL 243
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
+ K EA+EV L+ + A L+PD +F ++ Y AG A + + M +R
Sbjct: 244 YGWCREGKLMEAKEV---LVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 153 ----EIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
+ TV +L E E +++ +M+R G + D+V+Y LI+ + K ++
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 209 ALAVFEEMLDAGV 221
+V ++M GV
Sbjct: 361 GYSVLDDMRKKGV 373
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 54 TALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLS 113
LM + A + M G EP + +L + KEA +VFE
Sbjct: 171 VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFE---- 226
Query: 114 DERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKE 173
D R P+ + F ++Y + + G +A+++ M + + V + +L+S + +
Sbjct: 227 DMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 174 VSKIYD---QMQRSGLQPDVVSYALLINAYGKA-RREEEALAVFEEM 216
++ YD M++ G +P+V Y +LI A + +R +EA+ VF EM
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM 333
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ GN +A + ++M ++G +PN+ ++ +L+ + + G + A I+ +M T G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ + Y +++ +KFKEAE + E + + AP P F+ I AG +
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT---FNAFIKGLCDAGRLD 474
Query: 141 KARKMFSLMTQRE-IPHSTVTYNSLM 165
A K+F M Q+ P + VTYN L+
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELL 500
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 42/241 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+G+ + A I M G PNVV +T ++EA R ++ AE++ M
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS T+ +K + + AE+VF + R P P+ ++ ++ KA E
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP--PNIVTYNELLDGLAKANRIE 510
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNY----------------------------- 171
+A + + R + S+ TYN+L+ N
Sbjct: 511 EAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMII 570
Query: 172 ---------KEVSKIYDQMQ--RSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ +++ D + R +PDV+SY +I ++ E+ + + E M+ AG
Sbjct: 571 LAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAG 630
Query: 221 V 221
+
Sbjct: 631 I 631
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M + G+ PNV ++ L++A + + + A+ + M G P A++Y ++ + E
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 101 FKEAEEV---FEPLLSDERA------------------------PLKPDQKMFHMMIYMY 133
KE E+ FEP++S A + P+ + +I +
Sbjct: 232 VKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRS-GLQPD 189
+G E A + M +R + T +SL+ + +++QM R GLQP+
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351
Query: 190 VVSYALLINAYGKARREEEALAVFEEMLDAGV 221
VV+Y L+ + +A++VF M + G
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
I +I+ + + G A ++ + + G P+V + +++ R ++R M+
Sbjct: 115 ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 174
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G EP+ TY ++LK + NK A+++ L+ PD + +I + G
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKL---LVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
++ R+ + +R P +V YN+L + E +YK ++ +M G+ P+V+SY+
Sbjct: 232 VKEGRE----LAERFEPVVSV-YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
LIN + + E A + +ML G
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGC 312
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+ ++ A +++ M + G +PNV+S++ L+ G+ A + +M G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 81 PEPSALTYQIILK-TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P+ T ++K F+ G F +A +++ ++ L+P+ ++ ++ + GN
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTF-DALDLWNQMIRG--FGLQPNVVAYNTLVQGFCSHGNI 368
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALL 196
KA +FS M + + TY SL++ + I+++M SG P+VV Y +
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 197 INAYGKARREEEALAVFEEM 216
+ A + + +EA ++ E M
Sbjct: 429 VEALCRHSKFKEAESLIEIM 448
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G + + +L M G+ + +++ Y + G A +F R++ G +PS Y
Sbjct: 90 GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
+L T + N+ + V+ + +R +P+ +++++ K + A+K+
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDM---KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE 206
Query: 149 MTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
M+ + V+Y +++S V + + +R +P V Y LIN K +
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER--FEPVVSVYNALINGLCKEHDYKG 264
Query: 209 ALAVFEEMLDAGV 221
A + EM++ G+
Sbjct: 265 AFELMREMVEKGI 277
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + N A M K G NVV++ L+ A A + +M G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P A Y ++ + + +A V E L + D ++M+I ++ N E
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKL---KEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K +M + M + ++TYN+L+SF +++ V ++ +QM+ GL P V +Y +I
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 198 NAYGKARREEEALAVFEEM 216
+AY +EAL +F++M
Sbjct: 624 DAYCSVGELDEALKLFKDM 642
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A N +A M + G +P+ + AL+ + R ++A + +++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
L Y +++ F + N AE+V+E L E+ KPD ++ +I + K ++E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQ-RSGLQPDVVSYALL 196
+M M + + + TY +++ + E+ K++ M S + P+ V Y +L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 197 INAYGKARREEEALAVFEEM 216
INA+ K +AL++ EEM
Sbjct: 659 INAFSKLGNFGQALSLKEEM 678
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + + G A+++++ M + PNVV+ ++ R N A F M+ G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + +TY ++ + ++A +E +L A PD K+++ +I +
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE---AGCSPDAKIYYALISGLCQVRRDH 528
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
A ++ + + + YN L+ + K+Y+ M++ G +PD ++Y LI
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ +GK + E + E+M + G+
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGL 612
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 32 NEAEKI---LTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
N AEK+ LT M K G P+ +++ L+ +G+ + + E + +M+ G +P+ TY
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
++ + + EA ++F+ + + + P+ +++++I + K GN+ +A +
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDM--GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 149 MTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQM 181
M + + + TYN+L ++ +T + + K+ D+M
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 37/204 (18%)
Query: 50 VVSHTALMEAYGRGGRYNNAEAIFRRMQT--LGPEPSALTYQIILKTFVEGNKFK----- 102
+V+ L+ +GR G N + ++ R+ + + + ++L+ + + FK
Sbjct: 152 IVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEM 211
Query: 103 -EAEEVFEP----------------LLSDERA----------PLKPDQKMFHMMIYMYRK 135
+ E VF P LL++E+ + P+ I K
Sbjct: 212 LQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 271
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVS 192
A + S + + + P +N+L+S ++S++ D +M ++PDVV+
Sbjct: 272 NARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 331
Query: 193 YALLINAYGKARREEEALAVFEEM 216
+LIN K+RR +EAL VFE+M
Sbjct: 332 LGILINTLCKSRRVDEALEVFEQM 355
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR---RMQ 77
LI+ + ++A +++ + + G++ +++++ L+ G NNAE ++ M+
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI---GLFCDKNNAEKVYEMLTDME 573
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
G +P ++TY ++ F + F+ E + E + D L P + +I Y G
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED---GLDPTVTTYGAVIDAYCSVG 630
Query: 138 NYEKARKMFSLM-TQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSY 193
++A K+F M ++ +TV YN L+ S N+ + + ++M+ ++P+V +Y
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 194 ALLINAYGKARREEEALAVFEEMLD 218
L + + E L + +EM++
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVE 715
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 17 DSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM 76
D R++ K N +A+K+ M K + P++ S+T L+E +G+ + + R M
Sbjct: 199 DFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM 258
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
+ G EP + Y II+ + K++EA F + E+ KP +F +I
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEM---EQRNCKPSPHIFCSLINGLGSE 315
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSY 193
A + F P TYN+L+ + ++ K D+M+ G+ P+ +Y
Sbjct: 316 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTY 375
Query: 194 ALLINAYGKARREEEALAVFEEM 216
++++ + +R +EA V++ M
Sbjct: 376 DIILHHLIRMQRSKEAYEVYQTM 398
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I AH K + EA + M + P+ +L+ G + N+A F R ++ G
Sbjct: 273 IINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG 332
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP-LKPDQKMFHMMIYMYRKAGNY 139
A TY ++ + + ++A + + + P + + H +I M R Y
Sbjct: 333 FPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALL 196
E + M + TY ++ N + + KI+D+M+ G+ P + ++ L
Sbjct: 393 EVYQTM-------SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSL 445
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I A + +EA F EMLD G+
Sbjct: 446 ITALCHENKLDEACEYFNEMLDVGI 470
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M + G+ +++ + +A+ +F +M+ EP +Y I+L+ + +
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREI---PHS 157
+EV + DE +PD + ++I + KA YE+A + F+ M QR PH
Sbjct: 248 LLRVDEVNRE-MKDE--GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHI 304
Query: 158 TVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+ + + E + + +++ + SG + +Y L+ AY ++R E+A +EM
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 364
Query: 218 DAGV 221
GV
Sbjct: 365 LKGV 368
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + N A M K G NVV++ L+ A A + +M G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P A Y ++ + + +A V E L + D ++M+I ++ N E
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKL---KEGGFSLDLLAYNMLIGLFCDKNNTE 563
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K +M + M + ++TYN+L+SF +++ V ++ +QM+ GL P V +Y +I
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 198 NAYGKARREEEALAVFEEM 216
+AY +EAL +F++M
Sbjct: 624 DAYCSVGELDEALKLFKDM 642
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + N + ++LT M K G P+ +++ L+ +G+ + + E + +M+ G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ TY ++ + + EA ++F+ + + + P+ +++++I + K GN+
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDM--GLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A + M + + + TYN+L ++ +T + + K+ D+M +P+ ++ +L+
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + + G A+++++ M + PNVV+ ++ R N A F M+ G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + +TY ++ + ++A +E +L A PD K+++ +I +
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKML---EAGCSPDAKIYYALISGLCQVRRDH 528
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
A ++ + + + YN L+ + K+Y+ M++ G +PD ++Y LI
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ +GK + E + E+M + G+
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGL 612
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A N +A M + G +P+ + AL+ + R ++A + +++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
L Y +++ F + N E+V+E L E+ KPD ++ +I + K ++E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNN---TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQ-RSGLQPDVVSYALL 196
+M M + + + TY +++ + E+ K++ M S + P+ V Y +L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 197 INAYGKARREEEALAVFEEM 216
INA+ K +AL++ EEM
Sbjct: 659 INAFSKLGNFGQALSLKEEM 678
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM---Q 77
LI G+ G N++ +L Y N +++ R G ++A + M +
Sbjct: 158 LIRWFGRMGMVNQS--VLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKE 215
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
++ P P+ +T I+L +G E E++ + + P+ I K
Sbjct: 216 SVFP-PNRITADIVLHEVWKGRLLTE-EKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYA 194
A + S + + + P +N+L+S ++S++ D +M ++PDVV+
Sbjct: 274 RANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 195 LLINAYGKARREEEALAVFEEM 216
+LIN K+RR +EAL VFE+M
Sbjct: 334 ILINTLCKSRRVDEALEVFEKM 355
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR---RMQ 77
LI+ + ++A +++ + + G++ +++++ L+ G NN E ++ M+
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI---GLFCDKNNTEKVYEMLTDME 573
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
G +P ++TY ++ F + F+ E + E + D L P + +I Y G
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED---GLDPTVTTYGAVIDAYCSVG 630
Query: 138 NYEKARKMFSLM-TQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSY 193
++A K+F M ++ +TV YN L+ S N+ + + ++M+ ++P+V +Y
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 194 ALLINAYGKARREEEALAVFEEMLD 218
L + + E L + +EM++
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVE 715
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ GK +F E+++ M + G P V ++ A+++AY G + A +F+ M
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 81 P-EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P+ + Y I++ F + F +A + E + + ++P+ + ++ + +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEM---KMKMVRPNVETYNALFKCLNEKTQG 703
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQ 182
E K+ M ++ + +T LM + E+ K+ MQ
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + N A M K G NVV++ L+ A A + +M G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P A Y ++ + + +A V E L + D ++M+I ++ N E
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKL---KEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K +M + M + ++TYN+L+SF +++ V ++ +QM+ GL P V +Y +I
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 198 NAYGKARREEEALAVFEEM 216
+AY +EAL +F++M
Sbjct: 624 DAYCSVGELDEALKLFKDM 642
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
Query: 32 NEAEKI---LTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
N AEK+ LT M K G P+ +++ L+ +G+ + + E + +M+ G +P+ TY
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
++ + + EA ++F+ + + + P+ +++++I + K GN+ +A +
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDM--GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 149 MTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
M + + + TYN+L ++ +T + + K+ D+M +P+ ++ +L+
Sbjct: 678 MKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A N +A M + G +P+ + AL+ + R ++A + +++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
L Y +++ F + N AE+V+E L E+ KPD ++ +I + K ++E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQ-RSGLQPDVVSYALL 196
+M M + + + TY +++ + E+ K++ M S + P+ V Y +L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 197 INAYGKARREEEALAVFEEM 216
INA+ K +AL++ EEM
Sbjct: 659 INAFSKLGNFGQALSLKEEM 678
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + + G A+++++ M + PNVV+ ++ R N A F M+ G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + +TY ++ + ++A +E +L A PD K+++ +I +
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKML---EAGCSPDAKIYYALISGLCQVRRDH 528
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
A ++ + + + YN L+ + K+Y+ M++ G +PD ++Y LI
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ +GK + E + E+M + G+
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGL 612
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 37/204 (18%)
Query: 50 VVSHTALMEAYGRGGRYNNAEAIFRRMQT--LGPEPSALTYQIILKTFVEGNKFK----- 102
+V+ L+ +GR G N + ++ R+ + + + ++L+ + + FK
Sbjct: 152 IVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEM 211
Query: 103 -EAEEVFEP----------------LLSDERA----------PLKPDQKMFHMMIYMYRK 135
+ E VF P LL++E+ + P+ I K
Sbjct: 212 LQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 271
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVS 192
A + S + + + P +N+L+S ++S++ D +M ++PDVV+
Sbjct: 272 NARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 331
Query: 193 YALLINAYGKARREEEALAVFEEM 216
+LIN K+RR +EAL VFE+M
Sbjct: 332 LGILINTLCKSRRVDEALEVFEQM 355
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR---RMQ 77
LI+ + ++A +++ + + G++ +++++ L+ G NNAE ++ M+
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI---GLFCDKNNAEKVYEMLTDME 573
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
G +P ++TY ++ F + F+ E + E + D L P + +I Y G
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED---GLDPTVTTYGAVIDAYCSVG 630
Query: 138 NYEKARKMFSLM-TQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSY 193
++A K+F M ++ +TV YN L+ S N+ + + ++M+ ++P+V +Y
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 194 ALLINAYGKARREEEALAVFEEMLD 218
L + + E L + +EM++
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVE 715
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ GK +F E+++ M + G P V ++ A+++AY G + A +F+ M
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 81 P-EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P+ + Y I++ F + F +A + E + + ++P+ + ++ + +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEM---KMKMVRPNVETYNALFKCLNEKTQG 703
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQ 182
E K+ M ++ + +T LM + E+ K+ MQ
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ G +EA +++ M G + +V + L+ + R G A +F +M +G P+ +
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++K FV+ EA V + S+ L PD + ++MI+ Y + G +E+ARK+F
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSE---GLAPDIVLCNLMIHTYTRLGRFEEARKVF 340
Query: 147 SLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
+ + +R++ T+ S++S + V +I + G D+V+ LL N + K
Sbjct: 341 TSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKI 397
Query: 204 RREEEALAVFEEM 216
AL V M
Sbjct: 398 GYNSYALKVLSIM 410
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 108/271 (39%), Gaps = 73/271 (26%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L++ + G +A + M ++G +PN+V++T+L++ + G + A + ++Q+ G
Sbjct: 253 LVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEG 312
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMF-------------- 126
P + +++ T+ +F+EA +VF L E+ L PDQ F
Sbjct: 313 LAPDIVLCNLMIHTYTRLGRFEEARKVFTSL---EKRKLVPDQYTFASILSSLCLSGKFD 369
Query: 127 ------------------HMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
+++ + K G A K+ S+M+ ++ TY +S
Sbjct: 370 LVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSAL 429
Query: 169 TN----------YKEV------------SKIYDQM-------------QRSGLQP---DV 190
YK + S I D + +R L+ DV
Sbjct: 430 CRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDV 489
Query: 191 VSYALLINAYGKARREEEALAVFEEMLDAGV 221
VSY + I +A+R EEA ++ +M + G+
Sbjct: 490 VSYTVAIKGLVRAKRIEEAYSLCCDMKEGGI 520
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 73.9 bits (180), Expect = 7e-14, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 40/240 (16%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A K G +EA L M MG ++V +T+L+ + G + +A+F + G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP---------------------- 118
P A+TY +++ F + + KEA E+FE ++ P
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 119 ----------LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS-- 166
+P+ ++++I K G A ++ LM +R +TYN L+
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 167 -FETNYKEVSKIYDQMQR--SGLQPDVVSYALLINAYGKARREEEALAVFE---EMLDAG 220
+ + E SK+ M + S PDV+SY LI+ K R +AL +++ E L AG
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K G+ N+A ++ ++ N ++TA+++ + + G N A+ + +M+
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+PS Y +L + + +A +FE + D PD F++MI KAG+ +
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF---PDVVSFNIMIDGSLKAGDIK 581
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
A + M R+GL PD+ +Y+ LIN +
Sbjct: 582 SAESLLV--------------------------------GMSRAGLSPDLFTYSKLINRF 609
Query: 201 GKARREEEALAVFEEMLDAG 220
K +EA++ F++M+D+G
Sbjct: 610 LKLGYLDEAISFFDKMVDSG 629
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
Query: 37 ILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFV 96
+L M K G+A NV +H L++ R A ++ R M+ P +Y +++ F
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 97 EGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPH 156
EG KE E+ E + + + ++I + KAG ++A M +
Sbjct: 189 EG---KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 157 STVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
V Y SL+ + E+ + ++D++ G P ++Y LI + K + +EA +F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 214 EEMLDAGV 221
E M++ GV
Sbjct: 306 EFMIERGV 313
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 33 EAEKILTYMNKM---GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
E EK L N+M G + ++V+ L++A+ + G+ + A + M+ +G E + Y
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
+++ F + + + +F+ +L ER P ++ +I + K G ++A ++F M
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVL--ERGD-SPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 150 TQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARRE 206
+R + + TY L+ KE ++ + M +P+ V+Y ++IN K
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 207 EEALAVFEEM 216
+A+ + E M
Sbjct: 369 ADAVEIVELM 378
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
+A +L M + P+V S+ ++ + G A + M+ G S +T+ I++
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
F + K EA + + + L+ D ++ +I + G ++ + +F + +R
Sbjct: 220 DAFCKAGKMDEAMGFLKEM---KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 153 EIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEA 209
+TYN+L+ KE S+I++ M G++P+V +Y LI+ + +EA
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 210 LAVFEEMLD 218
L + M++
Sbjct: 337 LQLLNLMIE 345
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 28 QGNFNEAEKILTYMNK-MGYA-PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSA 85
+G+ +EA K+L M K Y P+V+S+ AL+ + R + A I+ +
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 86 LTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
+T I+L + ++ +A E+++ + SD + D + MI + K G A+ +
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQI-SDSKIVRNSD--TYTAMIDGFCKTGMLNVAKGL 516
Query: 146 FSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGK 202
M E+ S YN L+S E + + +++++MQR PDVVS+ ++I+ K
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 203 ARREEEALAVFEEMLDAGV 221
A + A ++ M AG+
Sbjct: 577 AGDIKSAESLLVGMSRAGL 595
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 97/193 (50%), Gaps = 7/193 (3%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
+EA++IL M G P ++ A++ +Y R G ++A ++ M+ G +P+ + Y +
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
+ F E +EA + F + E ++ + + +I Y K G E+AR+++ M
Sbjct: 627 INGFAESGMVEEAIQYFRMM---EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Query: 152 REIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
E NS++S + VS+ I++ ++ G DV+S+A ++ Y +E
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDE 742
Query: 209 ALAVFEEMLDAGV 221
A+ V EEM ++G+
Sbjct: 743 AIEVAEEMRESGL 755
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I G G+ +EAE +L M + G +P+ ++ L+ + G A +R+++ +G
Sbjct: 346 MIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVG 405
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +T++ +L + E E V + +R ++ D+ +++ MY G
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEM---DRNSIRIDEHSVPVIMQMYVNEGLVV 462
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKI-YDQMQRSGLQPDVVSYALL 196
+A+ +F Q + S+ T +++ + E + Y + SG + DV+ Y ++
Sbjct: 463 QAKALFERF-QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVM 521
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
I AYGKA+ E+AL++F+ M + G
Sbjct: 522 IKAYGKAKLHEKALSLFKGMKNQG 545
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKM-GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+I + ++G + EAE + M G +V+ + +++AYG+ + A ++F+ M+
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P TY + + + EA+ + +L + KP K + MI Y + G
Sbjct: 545 GTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD---SGCKPGCKTYAAMIASYVRLGLL 601
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMS-FETN--YKEVSKIYDQMQRSGLQPDVVSYALL 196
A ++ M + + + V Y SL++ F + +E + + M+ G+Q + + L
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 197 INAYGKARREEEALAVFEEMLDA 219
I AY K EEA V+++M D+
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDS 684
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR------ 74
L+ +GK G EA + +M + + P+ V+ ++ + G ++ A+ F+
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 75 ---RMQTLGPEPSALTYQ--IILKTFVEGNKFKEA-----EEVFEPLLSDERAPLKPD-Q 123
+ ++ P + Q + LK F+ FK E+ + +P KP
Sbjct: 246 VDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLT 305
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQ 180
F+ +I +Y KAG A +FS M + +P TVT+N+++ + E + +
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
M+ G+ PD +Y +L++ + A E AL + ++ G+
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGL 406
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 39/211 (18%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G +EAE I + + G +V+S +M Y G + A + M+ G ++
Sbjct: 704 GIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSF 762
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG----------- 137
++ + + E E+F +L + + L D F + + +K G
Sbjct: 763 NQVMACYAADGQLSECCELFHEMLVERKLLL--DWGTFKTLFTLLKKGGVPSEAVSQLQT 820
Query: 138 NYEKAR---------KMFSLM-------------TQREIPHSTVTYNSLM---SFETNYK 172
Y +A+ +FS M T EIP YN+++ S +
Sbjct: 821 AYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDID 880
Query: 173 EVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
K Y +MQ GL+PD+V+ A L+ YGKA
Sbjct: 881 MALKAYMRMQEKGLEPDIVTQAYLVGIYGKA 911
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 42/239 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ GK+ N +A ++ M G P++V+++ +++ + GR + A I R M
Sbjct: 207 LLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 266
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA---- 136
+P+ Y +++ T+ N+ +EA + F L ER+ +K D +F+ +I + KA
Sbjct: 267 CKPTTFIYSVLVHTYGTENRLEEAVDTF---LEMERSGMKADVAVFNSLIGAFCKANRMK 323
Query: 137 -------------------------------GNYEKARKMFSLMTQREIPHSTVTYNSLM 165
G ++A +F M + P + TY ++
Sbjct: 324 NVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD-TYTMVI 382
Query: 166 SFETNYKEV---SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
KE+ K++ M++ G+ P + ++++LIN + R ++A + EEM++ G+
Sbjct: 383 KMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 441
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
NV + +M Y R + + A F M+ P+ + + +L + ++A+EVF
Sbjct: 131 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 190
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
E + R PD K + +++ + K N KAR++F M VTY+ ++
Sbjct: 191 ENM----RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDIL 246
Query: 169 TNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
V + I M S +P Y++L++ YG R EEA+ F EM +G+
Sbjct: 247 CKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGM 302
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 91/200 (45%), Gaps = 7/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L++A K N +A+++ M + P+ +++ L+E +G+ A +FR M G
Sbjct: 173 LLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 231
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +TY I++ + + EA + + + + KP ++ ++++ Y E
Sbjct: 232 CHPDIVTYSIMVDILCKAGRVDEALGIVRSM---DPSICKPTTFIYSVLVHTYGTENRLE 288
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A F M + + +NSL+ K V ++ +M+ G+ P+ S +++
Sbjct: 289 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 348
Query: 198 NAYGKARREEEALAVFEEML 217
+ ++EA VF +M+
Sbjct: 349 RHLIERGEKDEAFDVFRKMI 368
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A F+E ++ L M G +V S+ A+++ + R NA MQ G
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +T+ L + K+ V E LL KPD F ++I +A +
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH---GFKPDVITFSLIINCLCRAKEIK 512
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
A F M + I + +TYN L+ + + K++ +M+ +GL PD+ +Y I
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
++ K R+ ++A + + ML G+
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGL 596
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
E + L + + GY P+ + A M +G IF + G +P Y +++
Sbjct: 338 ETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
+ + +F E + + + D L ++ +I KA E A + M R
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVD---GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454
Query: 153 EIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEA 209
I + VT+N+ +S + K+V + +++ G +PDV++++L+IN +A+ ++A
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 210 LAVFEEMLDAGV 221
F+EML+ G+
Sbjct: 515 FDCFKEMLEWGI 526
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 41/199 (20%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + +G+ + +L + G+ P+V++ + ++ R +A F+ M G
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+ +TY I++++ G+ +
Sbjct: 526 IEPNEITYNILIRSCCS--------------------------------------TGDTD 547
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
++ K+F+ M + + YN+ + ++V K + M R GL+PD +Y+ LI
Sbjct: 548 RSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Query: 198 NAYGKARREEEALAVFEEM 216
A ++ RE EA +F +
Sbjct: 608 KALSESGRESEAREMFSSI 626
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K G AE+I M G P+VV+ T+L++ Y R G+ + ++ M G
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A TY I++ N+ +A E+ L S + + P M++ +I + KAG
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKD---IIPQPFMYNPVIDGFCKAGKVN 434
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A + M +++ +T+ L+ + E I+ +M G PD ++ + L+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 198 NAYGKARREEEA 209
+ KA +EA
Sbjct: 495 SCLLKAGMAKEA 506
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 18/225 (8%)
Query: 10 WWDFSEMD-SIR--------LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+W+FS +IR L + K G + A ++ M G +PN L+ ++
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
G+ + A A+ +Q+ E + +L T V+ ++ ++A ++F+ L +
Sbjct: 149 AEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-- 204
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQ 180
D K F+++I G EKA ++ +M+ VTYN+L+ E++K +
Sbjct: 205 -DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 181 MQ--RSG--LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ +SG PDVV+Y +I+ Y KA + EA ++ ++ML G+
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
G+ A + M G EP +TY +++ F + N+ +A E+F+ + S + PD
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG--SVCSPDV 277
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQ 180
+ MI Y KAG +A + M + I + VT+N L+ E+ +I +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
M G PDVV++ LI+ Y + + + ++EEM
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K G AE+I M G P+VV+ T+L++ Y R G+ + ++ M G
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A TY I++ N+ +A E+ L S + + P M++ +I + KAG
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKD---IIPQPFMYNPVIDGFCKAGKVN 434
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A + M +++ +T+ L+ + E I+ +M G PD ++ + L+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 198 NAYGKARREEEA 209
+ KA +EA
Sbjct: 495 SCLLKAGMAKEA 506
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 18/225 (8%)
Query: 10 WWDFSEMD-SIR--------LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+W+FS +IR L + K G + A ++ M G +PN L+ ++
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
G+ + A A+ +Q+ E + +L T V+ ++ ++A ++F+ L +
Sbjct: 149 AEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-- 204
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQ 180
D K F+++I G EKA ++ +M+ VTYN+L+ E++K +
Sbjct: 205 -DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 181 MQ--RSG--LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ +SG PDVV+Y +I+ Y KA + EA ++ ++ML G+
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
G+ A + M G EP +TY +++ F + N+ +A E+F+ + S + PD
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG--SVCSPDV 277
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQ 180
+ MI Y KAG +A + M + I + VT+N L+ E+ +I +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 181 MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
M G PDVV++ LI+ Y + + + ++EEM
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 46/239 (19%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRR----- 75
LI K+GN EA +L M K G PN++++TA++ + G+ A +F R
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
Query: 76 ------------------------------MQTLGPEPSALTYQIILKTFVEGNKFKEAE 105
M+ G +PS LTY ++ + EA+
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD 402
Query: 106 EVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
EV + ++ D + ++ Y K N + ++ + +IP V N L+
Sbjct: 403 EVSKGVVGDVIT--------YSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILL 454
Query: 166 S---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
Y E +Y M L PD +YA +I Y K + EEAL +F E+ + V
Sbjct: 455 KAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV 513
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M + G +VVS++ L++ + G A + +M G EP+ +TY I++ + K
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
+EA +F +LS ++ D+ ++ +I + GN +A M M QR I S +T
Sbjct: 328 LEEAFVLFNRILS---VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 161 YNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
YN++++ VS+ D++ + G+ DV++Y+ L+++Y K + + L + L+A
Sbjct: 385 YNTVINGLCMAGRVSEA-DEVSK-GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Query: 221 V 221
+
Sbjct: 443 I 443
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 9/211 (4%)
Query: 13 FSEMDSIR---LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNA 69
S MD I +I K+G +A + ++ G N +++ +L+ + G A
Sbjct: 650 LSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 70 EAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMM 129
+F ++ +G PS +TY I++ + F +AE++ + ++S L P+ +++ +
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG---LVPNIIIYNSI 766
Query: 130 IYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGL 186
+ Y K G E A ++ S + T +S++ + + +E ++ + + +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 187 QPDVVSYALLINAYGKARREEEALAVFEEML 217
D + LI + R EEA + EML
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
+ LI ++GN N A +L M + G P+++++ ++ GR + A+ + +
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK---- 406
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G +TY +L ++++ E+ L A + D M ++++ + G
Sbjct: 407 -GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL---EAKIPMDLVMCNILLKAFLLMGA 462
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
Y +A ++ M + ++ T TY +++ +E ++++++++S + V Y
Sbjct: 463 YGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNR 521
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
+I+A K + A V E+ + G+
Sbjct: 522 IIDALCKKGMLDTATEVLIELWEKGL 547
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 22 ITAHG--KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
I HG K EA + M G+ P V+S+T ++ Y + + + M+
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P+++TY I+ + N KE EE +R+ KPD ++ +I+ +AG
Sbjct: 289 GSPPNSITYTTIMSSL---NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 140 EKARKMFSL-MTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGL-QPDVVSYA 194
E+A ++F + M + + +T TYNS+++ ++ E K + +M+ S L PDV +Y
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 195 LLINAYGKARREEEALAVFEEML 217
L+ + K E + +EM+
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMV 428
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 7/206 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + +Q F + ++L+ M G PN +++T +M + + A + RM+ G
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +L Y ++ T + +EAE VF + + + + ++ MI MY +
Sbjct: 325 CKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI--NTSTYNSMIAMYCHHDEED 382
Query: 141 KARKMFSLMTQREIPHSTV-TYNSLM--SFET-NYKEVSKIYDQM-QRSGLQPDVVSYAL 195
KA ++ M + + V TY L+ F+ + EV K+ +M + L D +Y
Sbjct: 383 KAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTF 442
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
LI +A E A +FEEM+ +
Sbjct: 443 LIQRLCRANMCEWAYCLFEEMISQDI 468
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 43/205 (20%)
Query: 56 LMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDE 115
+M + G + A IF R+ G E + + ++L T + + ++A V L
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL---- 216
Query: 116 RAPLKPDQKMFHMMIYMYRKAGNYEKAR-------------------------------- 143
++ + P+ F++ I+ + KA E+A
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 144 KMFSLMTQREI---PHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K++ ++++ E P +++TY ++MS + ++E ++ +M+RSG +PD + Y LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 198 NAYGKARREEEALAVFE-EMLDAGV 221
+ +A R EEA VF EM + GV
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGV 361
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 22 ITAHG--KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
I HG K EA + M G+ P V+S+T ++ Y + + + M+
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P+++TY I+ + N KE EE +R+ KPD ++ +I+ +AG
Sbjct: 289 GSPPNSITYTTIMSSL---NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 140 EKARKMFSL-MTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGL-QPDVVSYA 194
E+A ++F + M + + +T TYNS+++ ++ E K + +M+ S L PDV +Y
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 195 LLINAYGKARREEEALAVFEEML 217
L+ + K E + +EM+
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMV 428
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 7/206 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + +Q F + ++L+ M G PN +++T +M + + A + RM+ G
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +L Y ++ T + +EAE VF + + + + ++ MI MY +
Sbjct: 325 CKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI--NTSTYNSMIAMYCHHDEED 382
Query: 141 KARKMFSLMTQREIPHSTV-TYNSLM--SFET-NYKEVSKIYDQM-QRSGLQPDVVSYAL 195
KA ++ M + + V TY L+ F+ + EV K+ +M + L D +Y
Sbjct: 383 KAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTF 442
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
LI +A E A +FEEM+ +
Sbjct: 443 LIQRLCRANMCEWAYCLFEEMISQDI 468
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 43/205 (20%)
Query: 56 LMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDE 115
+M + G + A IF R+ G E + + ++L T + + ++A V L
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL---- 216
Query: 116 RAPLKPDQKMFHMMIYMYRKAGNYEKAR-------------------------------- 143
++ + P+ F++ I+ + KA E+A
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 144 KMFSLMTQREI---PHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
K++ ++++ E P +++TY ++MS + ++E ++ +M+RSG +PD + Y LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 198 NAYGKARREEEALAVFE-EMLDAGV 221
+ +A R EEA VF EM + GV
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGV 361
>AT1G01970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:338538-339905 FORWARD
Length = 409
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
+ E+ Q ++ + D ++I +GK +AE+ L M G+ + V+ TA+++ Y
Sbjct: 151 VAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLY 210
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
+ G + AE F ++ LG EPL
Sbjct: 211 SKAGCHKLAEETFNEIKLLG----------------------------EPL--------- 233
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKI 177
D + + MI Y +AG EK + M +EI Y +L+ S + + ++
Sbjct: 234 -DYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGGDAEGAKRV 292
Query: 178 YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+D +Q +G+ PDV LLINAY + + + A FE M AG+
Sbjct: 293 FDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGI 336
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 12 DFSEMDSIRL--------ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG 63
D + D +RL + A+ +QG AE IL M G++PN++++ L+ YG+
Sbjct: 303 DLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKI 362
Query: 64 GRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ 123
+ A+ +F R+ +G EP +Y+ +++ + + ++EA+ ++ L +R KP+
Sbjct: 363 FKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL---KRCGYKPNS 419
Query: 124 KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYK--EVSKIYDQM 181
+I + K G+ + A K MT +S++ L ++E K V +
Sbjct: 420 FNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGS 479
Query: 182 QRSGLQPDVVSYALLINAYGKARREEEALAVFEE 215
+ ++ + S++ L+ AY K ++ L + E
Sbjct: 480 FHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLRE 513
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 1 ILEWLRTQHWWD--FSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALME 58
L LR + W D F LI + + G +A KI + + N+ + +++
Sbjct: 507 CLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMID 566
Query: 59 AYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP 118
Y G ++ AE ++ +++ G + + I+++ +V+ +EA V E + DE+
Sbjct: 567 IYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM--DEQKD 624
Query: 119 LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVS 175
+ PD +F M+ +Y+K +K + ++ + + I + YN +++ E+S
Sbjct: 625 IVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELS 684
Query: 176 KIYDQMQRSGLQPDVVSYALLINAYGKAR 204
+++M R G P+ V++ +L++ YGKA+
Sbjct: 685 GTFEEMIRYGFTPNTVTFNVLLDVYGKAK 713
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A K+GN A K M + G PNV + LM Y + AE F M+ G
Sbjct: 216 VIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFG 275
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ Y ++ + + +AEEV + L+ +R LK + + +M+ Y + G E
Sbjct: 276 IVCES-AYSSMITIYTRLRLYDKAEEVID-LMKQDRVRLKLENWL--VMLNAYSQQGKME 331
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK------IYDQMQRSGLQPDVVSYA 194
A + M + + YN+L+ T Y ++ K ++ ++ GL+PD SY
Sbjct: 332 LAESILVSMEAAGFSPNIIAYNTLI---TGYGKIFKMEAAQGLFHRLCNIGLEPDETSYR 388
Query: 195 LLINAYGKARREEEALAVFEEMLDAG 220
+I +G+A EEA ++E+ G
Sbjct: 389 SMIEGWGRADNYEEAKHYYQELKRCG 414
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 36/196 (18%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ +GK F + ++ + G +V+S+ ++ AYG+ Y N + + MQ G
Sbjct: 705 LLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDG 763
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
S Y +L + K K+ E+ L +++ PD +++MI +Y + G +
Sbjct: 764 FSVSLEAYNTLLDAY---GKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 820
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
EV+ + +++ SGL PD+ SY LI AY
Sbjct: 821 --------------------------------EVADVLKELKESGLGPDLCSYNTLIKAY 848
Query: 201 GKARREEEALAVFEEM 216
G EEA+ + +EM
Sbjct: 849 GIGGMVEEAVGLVKEM 864
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A+GK ++ + M G++ ++ ++ L++AYG+ + +I +RM+
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY I++ + E E +V + L + + L PD ++ +I Y G E
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKEL---KESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS 166
+A + M R I VTY +L++
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVT 881
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K N EAE ++M K G ++++++ Y R Y+ AE + M+
Sbjct: 251 LMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDR 309
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ ++L + + K + AE + L+S E A P+ ++ +I Y K E
Sbjct: 310 VRLKLENWLVMLNAYSQQGKMELAESI---LVSMEAAGFSPNIIAYNTLITGYGKIFKME 366
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A+ +F + + +Y S++ NY+E Y +++R G +P+ + LI
Sbjct: 367 AAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N K + A+ E+M G
Sbjct: 427 NLQAKYGDRDGAIKTIEDMTGIGC 450
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
+ K G N + ++ R + F M G P+ +T+ ++L + +
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
FK+ E+F LL+ + D ++ +I Y K +Y M S
Sbjct: 715 FKKVNELF--LLAKRHGVV--DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEA 770
Query: 161 YNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
YN+L+ K++ K I +M++S PD +Y ++IN YG+ +E V +E+
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELK 830
Query: 218 DAGV 221
++G+
Sbjct: 831 ESGL 834
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I +G+QG +E +L + + G P++ S+ L++AYG GG A + + M+
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 81 PEPSALTYQIILKTFVEGNKFKEA 104
P +TY ++ ++F EA
Sbjct: 869 IIPDKVTYTNLVTALRRNDEFLEA 892
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 71.2 bits (173), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
I A K G EA K+ + M + G APNVV+ +++ G GRY+ A +M G
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
EP+ +TY I++K + +A V + + + P+ +++ +I + +AG+ K
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEM---TKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 142 ARKMFSLMTQREIPHSTVTYNSLM 165
A ++ LM + + ++ TYN+L+
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLI 407
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+F + G PS T I+L + V N+F++ E F+ + + PD +F I
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG----VSPDVYLFTTAIN 268
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQP 188
+ K G E+A K+FS M + + + VT+N++ + Y E ++M G++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 189 DVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+++Y++L+ +A+R +A V +EM G
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ + +EA L M K G P+ +++ L+ + A + + G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY +++ + + +E +E F+ ++S ++P+ +++ +I Y ++G
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN---VQPNTVVYNHLIRAYCRSGRLS 662
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ M + I ++ TY SL MS + +E ++++M+ GL+P+V Y LI
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 198 NAYGKARREEEALAVFEEM 216
+ YGK + + + EM
Sbjct: 723 DGYGKLGQMVKVECLLREM 741
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
E ++ M PN V + L+ AY R GR + A + M+ G P++ TY ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
K ++ +EA+ +FE + + L+P+ + +I Y K G K + M +
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEG---LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 153 EIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGK 202
+ + +TY ++ + + N E S++ ++M+ G+ PD ++Y I Y K
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 8/202 (3%)
Query: 25 HG--KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPE 82
HG + G +EA +I + G + VS+ L+ + + A M G +
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 83 PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKA 142
P TY I++ NK +EA + ++ +R + PD + +MI KA E+
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDC---KRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 143 RKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINA 199
++ F M + + +TV YN L+ +S ++ + M+ G+ P+ +Y LI
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 200 YGKARREEEALAVFEEMLDAGV 221
R EEA +FEEM G+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGL 711
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 45 GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEA 104
G +P+V T + A+ +GG+ A +F +M+ G P+ +T+ ++ ++ EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 105 EEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL 164
E ++ ER ++P + +++ +A A + MT++ P + + YN+L
Sbjct: 315 FMFKEKMV--ERG-MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 165 M-SF--ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ SF + + +I D M GL +Y LI Y K + + A + +EML G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
EA+ + M G PNV +TAL++ YG+ G+ E + R M + P+ +TY +++
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAP-LKPDQKMFHMMIYMYRKAGNYEKARK 144
+ EA LL++ R + PD + IY Y K G +A K
Sbjct: 758 GGYARDGNVTEASR----LLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A+ + G + A ++ M G +PN ++T+L++ R A+ +F M+ G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+ Y ++ + + + + E + + S + P++ + +MI Y + GN
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN---VHPNKITYTVMIGGYARDGNVT 767
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGL-----QPDVVSYAL 195
+A ++ + M ++ I ++TY IY +++ G+ D +YA
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEF------------IYGYLKQGGVLEAFKGSDEENYAA 815
Query: 196 LINAYGK 202
+I + K
Sbjct: 816 IIEGWNK 822
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 41/239 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPN----------VVSH----------------- 53
LI + K G + AE++L M +G+ N + SH
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 54 --------TALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAE 105
T L+ + G+++ A ++ + G T +L E K EA
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 106 EVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
+ + +L R + D+ ++ +I ++A M +R + TY+ L+
Sbjct: 526 RIQKEILG--RGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 166 S--FETN-YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
F N +E + +D +R+G+ PDV +Y+++I+ KA R EE F+EM+ V
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYM-NKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
++ A+ + GN ++A + +G NVV++ +L+ Y G + R M
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G + +TY ++K + + +EAE VFE LL +++ L DQ M+ +++ Y + G
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFE-LLKEKK--LVADQHMYGVLMDGYCRTGQI 347
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
A ++ M + + +T NSL++ E +I+ +M L+PD +Y L
Sbjct: 348 RDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407
Query: 197 INAYGKARREEEALAVFEEML 217
++ Y +A +EAL + ++M
Sbjct: 408 VDGYCRAGYVDEALKLCDQMC 428
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G EAE+I + MN P+ ++ L++ Y R G + A + +M
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY I+LK + F + +++ +L + + D+ ++ K G++
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMML---KRGVNADEISCSTLLEALFKLGDFN 488
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+A K++ + R + T+T N ++S ++V+ +I D + +P V +Y L
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS 548
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ Y K +EA AV E M G+
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGI 572
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 83 PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKA 142
P+ + Y + + + K ++A ++F LLS +R PD+ + ++I+ AG+ KA
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR--FIPDEYTYTILIHGCAIAGDINKA 774
Query: 143 RKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
+ M + I + VTYN+L+ N ++ ++ + G+ P+ ++Y LI+
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 200 YGKARREEEALAVFEEMLDAGV 221
K+ EA+ + E+M++ G+
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGL 856
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 15 EMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR 74
E+ L+ A K G+FNEA K+ + G + ++ ++ + + N A+ I
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 75 RMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYR 134
+ +P+ TYQ + + + KEA V E + ER + P +M++ +I
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM---ERKGIFPTIEMYNTLISGAF 587
Query: 135 KAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVV 191
K + K + + R + + TY +L++ N + K Y +M G+ +V
Sbjct: 588 KYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVN 647
Query: 192 SYALLINAYGKARREEEALAVFEEMLD 218
+ + N+ + + +EA + ++++D
Sbjct: 648 ICSKIANSLFRLDKIDEACLLLQKIVD 674
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 17 DSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM 76
DS+ AH K+ F A M G+ P V S A M + GR + A +R M
Sbjct: 172 DSLFKTFAHLKK--FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
+ P+ T +++ + K + E+ + + ER + ++ +I + +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM---ERLGFRATDVSYNTLIAGHCEK 286
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSY 193
G A K+ ++M + + + VT+N+L+ +E SK++ +M+ + P+ V+Y
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 194 ALLINAYGKARREEEALAVFEEMLDAGV 221
LIN Y + E A +E+M+ G+
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGI 374
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI H ++G + A K+ M K G PNVV+ L+ + R + A +F M+ +
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ + + + A +E ++ + ++ D ++ +I+ K
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN---GIQRDILTYNALIFGLCKQAKTR 395
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
KA + + + + ++ T+++L+ + K + +Y M RSG P+ ++ +L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 198 NAYGKARREEEALAVFEEML 217
+A+ + + A V EM+
Sbjct: 456 SAFCRNEDFDGASQVLREMV 475
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 96/199 (48%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +GK G+ ++A + + + S L+ G A++ F + +
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+++++ I++K F++ ++ A +VF+ +L E ++P ++ +I + +
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME---VQPSVVTYNSLIGFLCRNDDMG 238
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA+ + M ++ I + VT+ LM + Y E K+ M+ G +P +V+Y +L+
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 298
Query: 198 NAYGKARREEEALAVFEEM 216
+ GK R +EA + EM
Sbjct: 299 SDLGKRGRIDEAKLLLGEM 317
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI G +A+ M PN VS L++ + + A +F M +
Sbjct: 157 LINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME 216
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+PS +TY ++ + +A+ + E ++ + ++P+ F +++ G Y
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMI---KKRIRPNAVTFGLLMKGLCCKGEYN 273
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A+K+ M R V Y LMS E + +M++ ++PDVV Y +L+
Sbjct: 274 EAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Query: 198 NAYGKARREEEALAVFEEM 216
N R EA V EM
Sbjct: 334 NHLCTECRVPEAYRVLTEM 352
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L++ GK+G +EA+ +L M K P+VV + L+ R A + MQ G
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+A TY++++ F F V +L+ P F M+ K GN +
Sbjct: 357 CKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPA---TFVCMVAGLIKGGNLD 413
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS 166
A + +M ++ + + + +L+S
Sbjct: 414 HACFVLEVMGKKNLSFGSGAWQNLLS 439
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K+G A L +K G PN +S+ L++AY + Y+ A + +M G
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +TY I++ V +A + L+ +R + PD +++M++ K G +
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI--DRG-VSPDAAIYNMLMSGLCKTGRFL 467
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A+ +FS M R I Y +L+ ++ E K++ G++ DVV + +I
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 198 NAYGKARREEEALAVFEEM 216
+ ++ +EALA M
Sbjct: 528 KGFCRSGMLDEALACMNRM 546
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + G+F+EA K+ + + G +VV H A+++ + R G + A A RM
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY I+ +V+ A ++F + E+ KP+ + +I + G+++
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYM---EKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIY-DQMQRSGLQPDVVSYALL 196
A + F M R++ + VTY +L ++ E++ E + Y + M + P+ V++ L
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 197 INAYGK 202
+ + K
Sbjct: 668 LQGFVK 673
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 41/235 (17%)
Query: 22 ITAHG--KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
I HG G+ ++A + + G +P+ + LM + GR+ A+ +F M
Sbjct: 420 ILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR 479
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERA---------------------- 117
P A Y ++ F+ F EA +VF LS E+
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVFS--LSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 118 ------------PLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
L PD+ + +I Y K + A K+F M + + + VTY SL+
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 166 S---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+ + ++K + + +MQ L P+VV+Y LI + K E + E++
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM 652
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 21/198 (10%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + KQ + A KI YM K PNVV++T+L+ + G + AE F+ MQ
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Query: 81 PEPSALTYQIILKTFV-EGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA--- 136
P+ +TY ++++ E + ++A +E +++++ P++ F+ ++ + K
Sbjct: 621 LVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNK---CVPNEVTFNCLLQGFVKKTSG 677
Query: 137 -----------GNYEKARKMFSLMTQREIPHSTVTYNS---LMSFETNYKEVSKIYDQMQ 182
G + F M YNS + K D+M
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 183 RSGLQPDVVSYALLINAY 200
+ G PD VS+A +++ +
Sbjct: 738 KKGFSPDPVSFAAILHGF 755
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K G+ A + + G+ P + + ++ + + G + ++ + ++ G
Sbjct: 246 IIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG 305
Query: 81 PEPSA-LTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
S II + G K AE + + +D KPD ++++I K G
Sbjct: 306 LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND----CKPDVATYNILINRLCKEGKK 361
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKE---VSKIYDQMQRSGLQPDVVSYALL 196
E A +++ + + ++Y L+ KE SK+ QM G +PD+V+Y +L
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I+ + ++A+ + +++D GV
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGV 446
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEA-YGRGGRYNNAEAIFRRMQTL 79
+I K+G+F ++++L+ + + G +V +++A Y G + + AE+I +
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN- 339
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+P TY I++ + K KE F L + L P+ + +I Y K+ Y
Sbjct: 340 DCKPDVATYNILINRLCKEGK-KEVAVGF--LDEASKKGLIPNNLSYAPLIQAYCKSKEY 396
Query: 140 EKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+ A K+ M +R VTY L + + + + ++ G+ PD Y +L
Sbjct: 397 DIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNML 456
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
++ K R A +F EMLD +
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNI 481
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ K+GN A +++ M GY N V++ AL+ G N + R+ G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A TY +L+ + EA ++ + ++ +P+ +++++ + K G +
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG---EPNLVSYNVLLTGFCKEGRTD 263
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A +F + + + V+YN L + + ++E + + +M P VV+Y +LI
Sbjct: 264 DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 198 NAYGKARREEEALAVFEEM 216
N+ R E+AL V +EM
Sbjct: 324 NSLAFHGRTEQALQVLKEM 342
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K+ +EA K+L + G PN+VS+ L+ + + GR ++A A+FR + G
Sbjct: 217 LLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + ++Y I+L+ +++EA + + +RA P ++++I G E
Sbjct: 277 FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRA---PSVVTYNILINSLAFHGRTE 333
Query: 141 KARKMFSLMTQ--REIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
+A ++ M++ + + +YN + + E V K D+M +P+ +Y
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY-- 391
Query: 196 LINAYG 201
NA G
Sbjct: 392 --NAIG 395
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 76 MQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRK 135
+ T G +P+ +L + N+ K+A V E ++S + + PD + ++ K
Sbjct: 97 LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVS---SGIIPDASAYTYLVNQLCK 153
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVS 192
GN A ++ M P +TVTYN+L + + + + +++ + GL P+ +
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 193 YALLINAYGKARREEEALAVFEEMLDAG 220
Y+ L+ A K R +EA+ + +E++ G
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 30 NFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
+F+ E ++T G+ PNV T L+ + R A + M + G P A Y
Sbjct: 90 SFSHLESLVTG----GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
++ + A ++ E + D P + ++ ++ G+ ++ + +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEK-MEDHGYP--SNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 150 TQREIPHSTVTYNSLMSFETNYK-----EVSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
Q+ + + TY+ L+ E YK E K+ D++ G +P++VSY +L+ + K
Sbjct: 203 MQKGLAPNAFTYSFLL--EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 205 REEEALAVFEEM 216
R ++A+A+F E+
Sbjct: 261 RTDDAMALFREL 272
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 8/214 (3%)
Query: 11 WDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAE 70
WD D L+ + K G E ++ + G++ +VV+ L+ + +
Sbjct: 164 WDPVVFDM--LVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCW 221
Query: 71 AIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
++ M +G P+ T+ I+ F + F+E ++ E + E +PD ++ ++
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKM---EEEGFEPDLVTYNTLV 278
Query: 131 YMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQ 187
Y + G ++A ++ +M +R + VTY SL + + +E + + +M G++
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
PD +SY LI AY K +++ + EML V
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 372
>AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) |
chr1:6760032-6762581 FORWARD
Length = 725
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 17 DSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM 76
D +LI H K+ + + E+IL M++ G P++++ TAL+ Y + G + A F +
Sbjct: 386 DYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENL 445
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
++ G P Y+ ++ +V K K E + + + + E LK ++++ ++ Y +
Sbjct: 446 KSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKE---LKASEEVYMALLRAYAQM 502
Query: 137 GNYEKARKMFSLMT-QREIPHSTVTYNSLMSFETNYKEVSKI---YDQMQRSGLQPDVVS 192
G+ A + S M + P S Y+ + +V K +D+M++ G +PD
Sbjct: 503 GDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKC 562
Query: 193 YALLINAYGKARREEEALAVFEEMLDAGV 221
A L+ AY ++AL + ++ G+
Sbjct: 563 IANLVRAYKGENSLDKALRLLLQLEKDGI 591
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + GKQG EAE+ M + G P+ +++ ++ Y R GR + A + +
Sbjct: 588 IIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHF 647
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS+ TY +++ FV+ ++ + + +L D L P+ ++ +I + K G+++
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLED---GLSPNVVLYTALIGHFLKKGDFK 704
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS 166
+ +F LM + +I H + Y +L+S
Sbjct: 705 FSFTLFGLMGENDIKHDHIAYITLLS 730
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 37 ILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFV 96
++ + ++ + P+V ++ ++ + + A AI M+ LG P+ Y I+ +
Sbjct: 534 LVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLG 593
Query: 97 EGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPH 156
+ + EAEE F +L + ++PD+ + +MI Y + G ++A ++ + + +
Sbjct: 594 KQGRVVEAEETFAKML---ESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRP 650
Query: 157 STVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGK 202
S+ TY L+S + K D+M GL P+VV Y LI + K
Sbjct: 651 SSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK 699
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L K+G EAE + +M GY + V +T LM+ Y + A ++ RM
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERS 302
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E + ++ F++ + +F ++ + ++ + +H+MI Y K GN +
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMI---KKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 141 KARKMFSLMTQRE-IPHSTVTYNSLMSFETNYKEVSKIYDQMQR---SGLQPDVVSYALL 196
A ++F T E I + Y +L+ + K D + R +G+ PD ++Y +L
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVL 419
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
+ K + A+ + + +LD G
Sbjct: 420 LKMLPKCHELKYAMVILQSILDNGC 444
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 40/198 (20%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKM--GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
L++ GN+ + + K+ PN+ H ++ Y GR + A MQ
Sbjct: 763 LVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQK 822
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G P+ +TY I++K+ +E + A ++FE +PDQ M+ ++ + +
Sbjct: 823 EGIVPNLVTYTILMKSHIEAGDIESAIDLFEG------TNCEPDQVMYSTLL---KGLCD 873
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
+++ +LM +MQ+SG+ P+ SY L+
Sbjct: 874 FKRPLDALALML-----------------------------EMQKSGINPNKDSYEKLLQ 904
Query: 199 AYGKARREEEALAVFEEM 216
+R EA+ V ++M
Sbjct: 905 CLCYSRLTMEAVKVVKDM 922
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 66 YNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKM 125
Y A + +M LG P +Y ++K + N ++ + + + PD
Sbjct: 493 YIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNII---QELDFVPDVDT 549
Query: 126 FHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQ 182
+ +++ K + + A + M + + + Y+S++ + E + + +M
Sbjct: 550 YLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKML 609
Query: 183 RSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
SG+QPD ++Y ++IN Y + R +EA + EE++
Sbjct: 610 ESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ K G+ A K+ M +V S AL+ G R + A +++RM+T G
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMP----VRDVASWNALIAGLVSGNRASEAMELYKRMETEG 205
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
S +T L KE E +F +D + + + I MY K G +
Sbjct: 206 IRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-------NVIVSNAAIDMYSKCGFVD 258
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
KA ++F T ++ S VT+N++++ + E + I+D+++ +G++PD VSY +
Sbjct: 259 KAYQVFEQFTGKK---SVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAAL 315
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
A A E L+VF M GV
Sbjct: 316 TACRHAGLVEYGLSVFNNMACKGV 339
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 45/235 (19%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K G +A K+L+ M G +P+ + A+++A G ++ M
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P A T+ I++ + +EAEE+F + E++ P F+ +I K+G +
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEI---EKSGCSPSVATFNALIDGLCKSGELK 460
Query: 141 KAR-----------------------KMFSLMTQ--------REIPH--------STVTY 161
+AR + F M + R++ H V+Y
Sbjct: 461 EARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSY 520
Query: 162 NSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
N L++ ++ K+ + +Q GL PD V+Y LIN + REEEA +F
Sbjct: 521 NVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 35/230 (15%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K+G ++A+K+ M G +PN V++T L+ + G ++A +F MQT G P ++
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSV 269
Query: 87 TYQIILKTFVEGNKFKEAEEV--------------------------------FEPLLSD 114
+ +L F + + EA E+ FE +
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Query: 115 ERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---Y 171
+ +KPD ++ ++I KAG E A K+ S M + I T YN+++
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 172 KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+E + +M + PD ++ +LI + + EA +F E+ +G
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ ++G+ ++A K+ M G P+ V+H AL++ + + GR A + R + G
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
Y ++ ++ +A E++ +L + +KPD ++ ++I KAG E
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANML---KKNIKPDIILYTILIQGLSKAGKIE 355
Query: 141 KARKMFSLMTQREIPHSTVTYNSL------------------------------------ 164
A K+ S M + I T YN++
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 165 --MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
M +E +I+ ++++SG P V ++ LI+ K+ +EA + +M
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 45 GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFV-EGNKFKE 103
G + + L+ AY + G A F RM+ P TY +IL+ + E F
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 104 AEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNS 163
A V+ +L + P+ F +++ K G A+KMF MT R I + VTY
Sbjct: 182 AFAVYNEML---KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 164 LMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEA---LAVFEE 215
L+S + + K++ +MQ SG PD V++ L++ + K R EA L +FE+
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK 296
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M K +PN+ + LM+ + GR ++A+ +F M G P+ +TY I++ +
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
+A ++F + + + PD + ++ + K G +A ++ L +
Sbjct: 249 ADDARKLFYEM---QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 161 YNSLMS--FETN-YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
Y+SL+ F Y + ++Y M + ++PD++ Y +LI KA + E+AL + M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 218 DAGV 221
G+
Sbjct: 366 SKGI 369
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 45 GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEA 104
G+ P+VV+ ++++ +GG+ + R M+ + P+ +TY ++ + + N ++ A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 105 EEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL 164
++ ++ + D ++ +++ KAG+ +A K F ++ + + VTY +L
Sbjct: 314 LALYSQMVV---RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 165 MSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ ++S I QM + P+VV+Y+ +IN Y K EEA+++ +M D V
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL---GPEP 83
+ G EA IL M M PN+ ++ ++ ++ A+AIF+ +TL G +
Sbjct: 620 ENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT---SSKHKRADAIFKTHETLLSYGIKL 676
Query: 84 SALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKAR 143
S Y ++ T + K+A V + E PD F+ +++ Y + KA
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDM---EARGFIPDTVTFNSLMHGYFVGSHVRKAL 733
Query: 144 KMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
+S+M + I + TYN+++ ++ KEV K +M+ G++PD +Y LI+
Sbjct: 734 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 793
Query: 201 GKARREEEALAVFEEMLDAGV 221
K + ++ ++ EM+ G+
Sbjct: 794 AKIGNMKGSMTIYCEMIADGL 814
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K+G EA +L M PN ++ +++ + G+ A + + M+ +G
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E + ++ + KE + + + ++S + DQ + +I ++ K G+ E
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK---GVTLDQINYTSLIDVFFKGGDEE 521
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK--IYDQMQRSGLQPDVVSYALLIN 198
A M +R +P V+YN L+S + +V Y M+ G++PD+ ++ +++N
Sbjct: 522 AALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMN 581
Query: 199 AYGKARREEEALAVFEEMLDAGV 221
+ K E L ++++M G+
Sbjct: 582 SQRKQGDSEGILKLWDKMKSCGI 604
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 6/185 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K G +A ++ M G+ P+ V+ +LM Y G A + + M G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ TY I++ + KE ++ + S ++PD ++ +I K GN +
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS---RGMRPDDFTYNALISGQAKIGNMK 800
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLI 197
+ ++ M + T TYN L+S N + ++ +M + G+ P+ +Y +I
Sbjct: 801 GSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMI 860
Query: 198 NAYGK 202
+ K
Sbjct: 861 SGLCK 865
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + KQG+ K+ M G P+++S ++ G+ A I +M +
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVF---EPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
P+ TY+I L T +K K A+ +F E LLS +K +++++ +I K G
Sbjct: 639 IHPNLTTYRIFLDT---SSKHKRADAIFKTHETLLS---YGIKLSRQVYNTLIATLCKLG 692
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYA 194
+KA + M R TVT+NSLM ++ ++ Y M +G+ P+V +Y
Sbjct: 693 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
+I A +E EM G+
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGM 779
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR-RMQTLGPEPSALTYQI 90
++ I + M G +P+V + L+ ++ + GR + A ++ R R+ ++ +TY
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISI----DTVTYNT 166
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
++ E A+E ++ L + + PD ++ +I + K GN+ +A+ + ++
Sbjct: 167 VISGLCEHGL---ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 151 QREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
+ + +T+ L+S N + + Y M SG PDVV+++ +IN K + E
Sbjct: 224 ELNL----ITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 211 AVFEEM 216
+ EM
Sbjct: 280 LLLREM 285
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
K G+ EAEK + + PNVV++TAL++ + G ++AE I +M P+ +
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
TY ++ +V+ +EA + + E + P+ + +I KAG E A ++
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKM---EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 147 SLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
M + + ++L++ KEV + M G+ D ++Y LI+ + K
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M + G P++ + +M + + G ++ +M++ G +PS ++ I++ E K
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
+EA + ++ E + P+ + + + K + K + I S
Sbjct: 624 MEEAIHILNQMMLME---IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 161 YNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
YN+L++ K+ + + M+ G PD V++ L++ Y +AL+ + M+
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 218 DAGV 221
+AG+
Sbjct: 741 EAGI 744
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ A K+G ++ +++L M K G PN V++ L+ Y + G A I M+
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P TY I++ +E E+ + + S L+PD ++ +I + G
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKS---LKLQPDVVTYNTLIDGCFELGLSL 362
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF----ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+ARK+ M + + VT+N + + E K+ + + G PD+V+Y L
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I AY K AL + EM G+
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGI 447
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 36 KILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTF 95
K+ ++ G++P++V++ L++AY + G + A + R M G + + +T IL
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 96 VEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIP 155
+ K EA + L S + D+ + +I + + EKA +M+ M + +I
Sbjct: 462 CKERKLDEAHNL---LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Query: 156 HSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAV 212
+ T+NSL+ ++ + + +D++ SGL PD ++ +I Y K R E+A
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 213 FEEML 217
+ E +
Sbjct: 579 YNESI 583
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 99/202 (49%), Gaps = 7/202 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYM-NKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
L+ + +G +A +L M ++ P+ V++ +++A + GR ++ + + M+
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P+ +TY ++ + + KEA ++ E + ++ + PD ++++I AG+
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM---KQTNVLPDLCTYNILINGLCNAGSM 326
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMS--FETNYK-EVSKIYDQMQRSGLQPDVVSYALL 196
+ ++ M ++ VTYN+L+ FE E K+ +QM+ G++ + V++ +
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 197 INAYGKARREEEALAVFEEMLD 218
+ K + E +E++D
Sbjct: 387 LKWLCKEEKREAVTRKVKELVD 408
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 50/244 (20%)
Query: 15 EMDSIRLIT---AHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
+M++I L T A K+ +EA +L +K G+ + V++ L+ + R + A
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
++ M+ + P+ T+ ++ K + A E F+ L + L PD F+ +I
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL---AESGLLPDDSTFNSIIL 564
Query: 132 MYRKAGNYEKARKMF------------------------------------SLMTQREIP 155
Y K G EKA + + +L+ +RE+
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV- 623
Query: 156 HSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLINAY---GKARREEEA 209
TVTYN+++S K++ + YD +M+ GL+PD +Y I+ GK +E
Sbjct: 624 -DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Query: 210 LAVF 213
L F
Sbjct: 683 LKKF 686
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 57 MEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVE---GNKFKEAEEVFEPLLS 113
+ AY G+ + A IF++M L +P+ LT +L V A EVF+ ++
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMV- 196
Query: 114 DERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM-TQREIPHSTVTYNSL---MSFET 169
+ + + + F++++ Y G E A M M ++ ++ VTYN++ MS +
Sbjct: 197 --KIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 170 NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
++ ++ M+++GL P+ V+Y L+ Y K +EA + E M V
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
>AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076) |
chr3:11238421-11240125 FORWARD
Length = 540
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 92/182 (50%), Gaps = 5/182 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+A K+ ++ A KI M K G PN+V+ L+ + G+ G+ ++ +++LG
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P T+ +L + N++++ ++F+ + S+ L ++ +++ + +K G +E
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCL--NEYLYNTAMVSCQKLGYWE 407
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA K+ M + ST +YN ++S K +Y+ M + +P+ +Y L+
Sbjct: 408 KAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Query: 198 NA 199
+
Sbjct: 468 RS 469
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF--RRM 76
+ + A G+ G E + + Y +MG++ ++V T +++ Y + ++ I RR+
Sbjct: 209 VGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK------SKCIIYARRV 262
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEV-FEPLLSDERAPLKPDQKMFHMMIYMYRK 135
L + + +T+ ++ +VE KEA EV F+ L++D A + P +++ +
Sbjct: 263 FDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCAR 320
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
G+ R + + N+++SF Y + + Q GL+ DV+SY
Sbjct: 321 FGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK-DVISYNS 379
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
LI R EE+ +F EM +G+
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGI 405
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
NVVS TA++ Y R G +NA A+F M PE ++ IL + F EA +F
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDM----PERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF- 167
++++ ++P++ ++ + G + A+ + + +R++ NSL+
Sbjct: 248 RRMINEPS--IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLY 305
Query: 168 --ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
N +E S ++ + L ++ +IN + R EEA+AVFEEM+ +
Sbjct: 306 GKCGNLEEASSVFKMASKKSL----TAWNSMINCFALHGRSEEAIAVFEEMMKLNI 357
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 35/203 (17%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
+E+ + +++A + G A+ I + + + +V +L++ YG+ G A ++F
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
+ + + S + ++ F + +EA VFE ++ +KPD F ++
Sbjct: 319 K----MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSY 193
G K R F LMT R G++P + Y
Sbjct: 375 THGGLVSKGRGYFDLMT-------------------------------NRFGIEPRIEHY 403
Query: 194 ALLINAYGKARREEEALAVFEEM 216
LI+ G+A R +EAL V M
Sbjct: 404 GCLIDLLGRAGRFDEALEVMSTM 426
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 21 LITAHGK-QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
LITA K G A+++L ++ + + ++ + R +A+A+ M +
Sbjct: 843 LITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISK 902
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
GP P + +++ + EA+EV + + E LKPD + ++I Y K G
Sbjct: 903 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLM---ESRGLKPDVYTYTVIISGYAKGGMM 959
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALL 196
++A+++ + ++ S VTY++L+ Y E K+ ++M R G+QP+ Y L
Sbjct: 960 DEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKL 1019
Query: 197 INAYG-KARREEEALAVFEEMLDAGV 221
I ++ KA E+A +FEEM G+
Sbjct: 1020 IQSFCLKALDWEKAEVLFEEMKQKGL 1045
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + + N +A+ +L M G AP ++ A + G + A+ + + M++ G
Sbjct: 879 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG 938
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P TY +I+ + +G EA+E+ L ++ K +H +I Y K Y+
Sbjct: 939 LKPDVYTYTVIISGYAKGGMMDEAQEI---LAEAKKKHKKLSPVTYHALIRGYCKIEEYD 995
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM-SF---ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+A K+ + M + + + YN L+ SF ++++ ++++M++ GL + +S L+
Sbjct: 996 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLI 1055
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 67.8 bits (164), Expect = 6e-12, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 41/233 (17%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+LI A + N +A + + P++ ++T ++ Y R A A+F M+
Sbjct: 605 KLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRR 664
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+P +TY ++L + E + +E E F+ + PD + +MI Y +
Sbjct: 665 DVKPDVVTYSVLLNSDPELDMKREME-AFDVI---------PDVVYYTIMINRYCHLNDL 714
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLM-------------SFET----------------- 169
+K +F M +REI VTY L+ +F+
Sbjct: 715 KKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKI 774
Query: 170 -NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ E +I+DQM SG+ PD Y LI K +EA +F+ M+++GV
Sbjct: 775 GDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGV 827
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M P+VV +T ++ Y A+F+ M+ P +TY ++LK E N
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNL 748
Query: 101 FKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVT 160
+E + F+ +KPD + ++I K G+ +A+++F M + +
Sbjct: 749 SREMK-AFD---------VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAP 798
Query: 161 YNSLMSF--ETNY-KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
Y +L++ + Y KE I+D+M SG++PDVV Y LI + +A+ + +EML
Sbjct: 799 YTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEML 858
Query: 218 DAGV 221
+ G+
Sbjct: 859 EKGI 862
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
+AE ++ M K G P+V ++A++E + + A +F +M + + IL
Sbjct: 309 DAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSIL 368
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
+ + + F EA ++F+ + D+ +++ K G E+A ++F MT +
Sbjct: 369 QCYCQMGNFSEAYDLFKEF---RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK 425
Query: 153 EIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLINAYGKARREEEA 209
I + Y +L+ + S +D +M +G PD+V Y +L +EA
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 210 LAVFEEMLDAGV 221
+ M + GV
Sbjct: 486 FETLKMMENRGV 497
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 87/219 (39%), Gaps = 31/219 (14%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
QG ++A ++ M+ G P++V + L G A + M+ G +P+ +T
Sbjct: 444 QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERA---------------------------PLK 120
+ ++++ ++ + +AE +E L R PL
Sbjct: 504 HNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPL- 562
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKI 177
P F + + + KA+ + M + + Y L+ N ++ +
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 622
Query: 178 YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
++ + + PD+ +Y ++IN Y + ++A A+FE+M
Sbjct: 623 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 85 ALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARK 144
+ Y+ +++ + ++AE V +L E+ + PD ++ +I +RK N KA
Sbjct: 291 GIAYRKVVRGLCYEMRIEDAESV---VLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVD 347
Query: 145 MFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYG 201
+F+ M ++ + V +S++ N+ E ++ + + + + D V Y + +A G
Sbjct: 348 VFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALG 407
Query: 202 KARREEEALAVFEEMLDAGV 221
K + EEA+ +F EM G+
Sbjct: 408 KLGKVEEAIELFREMTGKGI 427
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +GK G A+++ +A N+ +T +M+AY + + A +F +M T
Sbjct: 278 LINMYGKCGKVLYAQRVFDDT----HAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ T+ I+L + E + K+ + + +L ++ + + + ++ MY K+G+ E
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVL---KSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALLI 197
ARK FS MT R+I VT+N+++S +++ +E + +D+M +G P+ +++ ++
Sbjct: 391 DARKAFSGMTFRDI----VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVL 446
Query: 198 NAYGKARREEEALAVFEEML 217
A E+ L F +++
Sbjct: 447 QACSHIGFVEQGLHYFNQLM 466
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 15 EMDSI---RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
+MDS+ ++ G EAE + M G++PN+ +++L+ +Y G Y A+
Sbjct: 234 QMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+ M+++G P+ + +LK +++G F + E+ L E A ++ + M++
Sbjct: 294 LMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL---ESAGYAENEMPYCMLMD 350
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM----SFETNYKEVSKIYDQMQRSGLQ 187
KAG E+AR +F M + + S NS+M +KE ++ + + +
Sbjct: 351 GLSKAGKLEEARSIFDDMKGKGV-RSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
D+V ++ AY +A E + + ++M + V
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAV 443
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 42/228 (18%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEA--------------------- 59
+++ K G + K+ M + G P+VV++ L+
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN 231
Query: 60 --------YG-------RGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEA 104
YG GR AE ++M+ G P+ Y +L ++ +K+A
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 105 EEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSL 164
+E+ + S L P++ M ++ +Y K G ++++R++ S + + + Y L
Sbjct: 292 DELMTEMKS---IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 165 M---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEA 209
M S +E I+D M+ G++ D + +++I+A +++R +EA
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA 396
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 100/232 (43%), Gaps = 43/232 (18%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ ++ +G++ +A++++T M +G PN V T L++ Y +GG ++ + + +++ G
Sbjct: 278 LLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG 337
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPL----------------------------- 111
+ + Y +++ + K +EA +F+ +
Sbjct: 338 YAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAK 397
Query: 112 -LS--DERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
LS E K D M + M+ Y +AG E +M M ++ + T++ L+ +
Sbjct: 398 ELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF 457
Query: 169 TN-------YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
Y+ ++ + R L+ ++ S LI GK R + EA +V+
Sbjct: 458 IKEKLHLLAYQTTLDMHSKGHR--LEEELCSS--LIYHLGKIRAQAEAFSVY 505
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 38 LTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVE 97
L+ + ++ V ++ +G GR+ + +F MQ G + S TY +K FV
Sbjct: 86 LSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVG 143
Query: 98 GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHS 157
+A E+++ + DE K + + + ++ K G + K+F M + +
Sbjct: 144 AKNVSKALEIYQSI-PDEST--KINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 158 TVTYNSLMS----FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
VTYN+L++ + Y + ++ ++ +G+Q D V Y ++ R EEA
Sbjct: 201 VVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFI 260
Query: 214 EEM 216
++M
Sbjct: 261 QQM 263
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 98/204 (48%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A+G+ GN + A + + + V+ + L+ YG G Y+ I+ M+ LG
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ + Y ++ + + +A+ +++ L+++ P+ + ++ Y +A +
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG---FTPNWSTYAALVRAYGRARYGD 367
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRS-GLQPDVVSYALL 196
A ++ M ++ + + + YN+L+S + + E +I+ M+ PD +++ L
Sbjct: 368 DALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSL 427
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
I Y + R EA A +M +AG
Sbjct: 428 ITVYACSGRVSEAEAALLQMREAG 451
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 34/202 (16%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
RLI + G+ +A+ I + G+ PN ++ AL+ AYGR ++A AI+R M+
Sbjct: 320 RLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEK 379
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G + + Y +L + EA E+F+ + + E PD F +I +Y +G
Sbjct: 380 GLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC--DPDSWTFSSLITVYACSGRV 437
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
+A QM+ +G +P + +I
Sbjct: 438 SEAEAALL--------------------------------QMREAGFEPTLFVLTSVIQC 465
Query: 200 YGKARREEEALAVFEEMLDAGV 221
YGKA++ ++ + F+++L+ G+
Sbjct: 466 YGKAKQVDDVVRTFDQVLELGI 487
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 41/204 (20%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+ + G A + M+ G P+ V+ A+++AYGR G + A +++ R +T
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
A+T F +I +Y +GNY+
Sbjct: 276 WRIDAVT--------------------------------------FSTLIRIYGVSGNYD 297
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLI 197
++ M + + V YN L+ K + IY + +G P+ +YA L+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
AYG+AR ++ALA++ EM + G+
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGL 381
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 76 MQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRK 135
++T+ P + Y + +K F + +++E++F+ +L ER +KPD F +I R+
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEML--ERG-IKPDNATFTTIISCARQ 222
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVS 192
G ++A + F M+ VT +++ N +YD+ + + D V+
Sbjct: 223 NGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVT 282
Query: 193 YALLINAYGKARREEEALAVFEEMLDAGV 221
++ LI YG + + L ++EEM GV
Sbjct: 283 FSTLIRIYGVSGNYDGCLNIYEEMKALGV 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 25/157 (15%)
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
G GG+ +A+ PE + L +L+T K + EV
Sbjct: 135 GFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETM------KPSREVI------------ 176
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKI 177
++++ + ++RK+ + EK+ K+F M +R I T+ +++S K +
Sbjct: 177 ----LYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEW 232
Query: 178 YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
+++M G +PD V+ A +I+AYG+A + AL++++
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYD 269
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 6/197 (3%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
G + KI M K G P+ ++ L+ R GR + A+ +F M P+ +T
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
Y ++ EA E + S ++P+ + ++ K G +A ++F
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKS---KGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 148 LMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
+M R + VTY +L++ E +E ++ D+M GL+PD Y +I+ +
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 205 REEEALAVFEEMLDAGV 221
+ EA +EM+ G+
Sbjct: 347 KFREAANFLDEMILGGI 363
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALME---AYGRGGRYNNAEAIFRR 75
+RL++A+ F AE ++ +M VVS L+ YGR R ++ +F +
Sbjct: 59 LRLVSAN----KFKAAEDLIV---RMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHK 111
Query: 76 MQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI-YMYR 134
M+ +PS Y +L VE N+ A + ++ + L P +++I + R
Sbjct: 112 MKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM---REIGLPPTVASLNVLIKALCR 168
Query: 135 KAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVV 191
G + K+F M +R + TY +L+S + E K++ +M P VV
Sbjct: 169 NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
Query: 192 SYALLINAYGKARREEEALAVFEEMLDAGV 221
+Y LIN ++ +EA+ EEM G+
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI N +EA + L M G PNV ++++LM+ + GR A +F M G
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY ++ + K +EA E+ + + LKPD ++ +I + +
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRM---NLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 141 KARKMFSLMTQREIPHSTVTYN--------SLMSFETNYKEVS-KIYDQMQRSGLQPDVV 191
+A M I + +T+N + NY + +Y M+ G+ +V
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVE 409
Query: 192 SYALLINAYGKARREEEALAVFEEMLDAGV 221
+ L+ K ++A+ + +E++ G
Sbjct: 410 TLESLVKCLCKKGEFQKAVQLVDEIVTDGC 439
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 106/198 (53%), Gaps = 24/198 (12%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L++ + K G +EA K+ M + NVVS TAL++ Y G+ + AE++F +M
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKM---- 136
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PE + +++ ++L F++ + +A +++E ++ D+ D MI+ K G +
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYE-MIPDK------DNIARTSMIHGLCKEGRVD 189
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDV--VSYALLIN 198
+AR++F M++R S +T+ +++ T Y + +++ D + + P+ VS+ ++
Sbjct: 190 EAREIFDEMSER----SVITWTTMV---TGYGQNNRVDDARKIFDVMPEKTEVSWTSMLM 242
Query: 199 AYGKARREEEALAVFEEM 216
Y + R E+A +FE M
Sbjct: 243 GYVQNGRIEDAEELFEVM 260
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + ++GN A TY ++M + +S T +++ Y R G +N + IFR MQ+ G
Sbjct: 308 IVKGYVERGNLKLAR---TYFDQMP-VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG 363
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P T +L + E + + ++ +K D + + +I MY K G E
Sbjct: 364 MIPDEFTMVSVLTACAHLGSLEIGEWIKTYI---DKNKIKNDVVVGNALIDMYFKCGCSE 420
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALLI 197
KA+K+F M QR+ T+ +++ N +E K++ QMQ +QPD ++Y ++
Sbjct: 421 KAQKVFHDMDQRD----KFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVL 476
Query: 198 NAYGKARREEEALAVFEEM 216
+A + ++A F +M
Sbjct: 477 SACNHSGMVDQARKFFAKM 495
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 15 EMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR 74
E + ++TA G+ E I TY++K +VV AL++ Y + G A+ +F
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 75 RMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYR 134
M + T+ ++ + +EA +VF + + ++PD + ++
Sbjct: 428 DMD----QRDKFTWTAMVVGLANNGQGQEAIKVFFQM---QDMSIQPDDITYLGVLSACN 480
Query: 135 KAGNYEKARKMFSLM-TQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSY 193
+G ++ARK F+ M + I S V Y ++ V + Y+ +++ + P+ + +
Sbjct: 481 HSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVW 540
Query: 194 ALLINA 199
L+ A
Sbjct: 541 GALLGA 546
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 67.0 bits (162), Expect = 8e-12, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI A +G ++A + M G PNV ++T L++ R G+ A + R+M
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS +TY ++ + + + A FE L E+ KP+ + F+ ++ + G
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPA---FELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
KA + M + V+YN L + E + K+ M ++PD +++ +I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
NA+ K + + A A ML G+
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGI 507
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 30 NFNEAEKILTYMNK-MGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
N +A K+ M+K + APN VS++ L+ GR A + +M G +PS TY
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAP--LKPDQKMFHMMIYMYRKAGNYEKARKMF 146
+++K + +A +F DE P KP+ + ++I + G E+A +
Sbjct: 305 TVLIKALCDRGLIDKAFNLF-----DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 147 SLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQ---MQRSGLQPDVVSYALLINAYGKA 203
M + I S +TYN+L++ V ++ M++ +P+V ++ L+ +
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 204 RREEEALAVFEEMLDAGV 221
+ +A+ + + MLD G+
Sbjct: 420 GKPYKAVHLLKRMLDNGL 437
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++G+ N A K+L+ MN P+ ++ TA++ A+ + G+ + A A M G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+T ++ + K ++A + E L+ R P ++++ M K +
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVK-MRILTTPHS--LNVILDMLSKGCKVK 563
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+ M + + + S VTY +L+ +++ +I + M+ SG P+V Y ++I
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N + R EEA + M D+GV
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGV 647
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
E +L +NK+G P+VV++T L++ R G + I M+ G P+ Y II+
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
+ + +EAE++ + + + + P+ + +M+ Y G ++A + M +R
Sbjct: 624 NGLCQFGRVEEAEKLLSAM---QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 153 EIPHSTVTYNSLM 165
+ Y+SL+
Sbjct: 681 GYELNDRIYSSLL 693
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G A ++LT M K PNV + LME R G+ A + +RM G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P ++Y +++ A ++ L S ++PD F +I + K G +
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTA---YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM 165
A LM ++ I VT +L+
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLI 518
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 16 MDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRR 75
+D ++ A K G AE ++ + K+G+ + T+L+ + RG +A +F
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 76 M-QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYR 134
M + + P++++Y I++ E + +EA + + + E+ +P + + ++I
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM--GEKG-CQPSTRTYTVLIKALC 312
Query: 135 KAGNYEKARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVV 191
G +KA +F M R + TY L + + +E + + +M + + P V+
Sbjct: 313 DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
Query: 192 SYALLINAYGKARREEEALAVFEEM 216
+Y LIN Y K R A + M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVM 397
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A KQG + A L M + G + + V+ T L++ + G+ +A I + +
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + +IL +G K KE + + + L P + ++ ++G+
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKI---NKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 141 KARKMFSLMTQRE-IPHS---TVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+ ++ LM +P+ T+ N L F +E K+ MQ SG+ P+ V+Y ++
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQF-GRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
+ Y + + AL M++ G
Sbjct: 658 VKGYVNNGKLDRALETVRAMVERG 681
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P++VS T L++ A + ++ G +P Y I+K F +K EA V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 167
++ + + ++PDQ ++ +I+ KAG E+AR M T TY SLM+
Sbjct: 288 YKKM---KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Query: 168 ETNYKE---VSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
E + ++M+ G P+ +Y L++ KAR ++ + ++E M +GV
Sbjct: 345 MCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 5/200 (2%)
Query: 24 AHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEP 83
+ + ++L M G P+ V+ + + GR + A+ + + + P
Sbjct: 133 CRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP 192
Query: 84 SALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKAR 143
TY +LK + E + + D +KPD F ++I + N +A
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD--FDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 144 KMFSLMTQREIPHSTVTYNSLM-SFETNYK--EVSKIYDQMQRSGLQPDVVSYALLINAY 200
+ S + YN++M F T K E +Y +M+ G++PD ++Y LI
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 201 GKARREEEALAVFEEMLDAG 220
KA R EEA + M+DAG
Sbjct: 311 SKAGRVEEARMYLKTMVDAG 330
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 6/202 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI N EA +++ + G+ P+ + +M+ + + + A ++++M+ G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP +TY ++ + + +EA + ++ A +PD + ++ + G
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD---AGYEPDTATYTSLMNGMCRKGESL 352
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A + M R + TYN+L+ + + K +Y+ M+ SG++ + YA L+
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 198 NAYGKARREEEALAVFEEMLDA 219
+ K+ + EA VF+ +D+
Sbjct: 413 RSLVKSGKVAEAYEVFDYAVDS 434
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 56 LMEAYGR-GGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD 114
LM YG GR N A I M G PS+ ++ IL V F E ++F +S
Sbjct: 137 LMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF---VSA 193
Query: 115 ERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---Y 171
+ ++ D +++I ++GN E A ++ Q++ + +T++ L+ N +
Sbjct: 194 PKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKF 253
Query: 172 KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+E K+ ++M++ ++PD +++ +LI+ K R EE + + E M G
Sbjct: 254 EEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC 303
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 6/193 (3%)
Query: 31 FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQI 90
F+E KI K+G + L++ G A + P+ +T+
Sbjct: 183 FDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSP 242
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
+++ F KF+EA ++ E + E+ ++PD F+++I RK G E+ + M
Sbjct: 243 LIRGFCNKGKFEEAFKLLERM---EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 151 QREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREE 207
+ + TY ++ + K E ++ QM G++P +SY ++ + +
Sbjct: 300 VKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVV 359
Query: 208 EALAVFEEMLDAG 220
E V +M++ G
Sbjct: 360 EMDWVLRQMVNHG 372
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +G F EA K+L M K P+ ++ L+ + GR + RM+ G
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG 302
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLS 113
EP+ TYQ +L ++ + EA+E+ ++S
Sbjct: 303 CEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMIS 335
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNK-MGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+I +GK G+ ++A ++ + K +G V + +L+ A ++ A A+ RRM
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G +P TY I++ + K KEA+E + + R P + ++I AG
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM---SRRGFNPPARGRDLLIEGLLNAGYL 268
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALL 196
E A++M S MT+ T+N L+ + EV ++Y + GL D+ +Y L
Sbjct: 269 ESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTL 328
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
I A K + +EA + ++ G
Sbjct: 329 IPAVSKIGKIDEAFRLLNNCVEDG 352
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 96/222 (43%), Gaps = 7/222 (3%)
Query: 4 WLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRG 63
W R+ + + M+ L + + KIL M + + + ++E YG+
Sbjct: 100 WARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKN 159
Query: 64 GRYNNAEAIFRRM-QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD 122
G + A +F + +TLG + + Y +L + F A + ++ R LKPD
Sbjct: 160 GHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMI---RKGLKPD 216
Query: 123 QKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVSK-IYD 179
++ + +++ + AG ++A++ M++R + L+ Y E +K +
Sbjct: 217 KRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVS 276
Query: 180 QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+M + G PD+ ++ +LI A K+ E + ++ G+
Sbjct: 277 KMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGL 318
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K G+ + K+ M +G P+ S + AY G ++A + RM+
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYD 308
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ T+ I+KT + K +A + + ++ + PD ++ ++ +
Sbjct: 309 LVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI---QKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A K+ S M + + TYN ++ + ++I++ M P V +Y ++I
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Query: 198 NAYGKAR-REEEALAVFEEMLDAGV 221
+ + + + EEA FE M+D G+
Sbjct: 426 HGLVRKKGKLEEACRYFEMMIDEGI 450
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
+EA + M + G P V L+ + N+A+ F + + G PSA TY I+
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
++ + A +VF+ +L ER + D ++ ++ K+G+ + KMF M
Sbjct: 215 VRGWARIRDASGARKVFDEML--ERNCV-VDLLAYNALLDALCKSGDVDGGYKMFQEMGN 271
Query: 152 REIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
+ ++ + + +V K+ D+M+R L P+V ++ +I K + ++
Sbjct: 272 LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
Query: 209 ALAVFEEMLDAG 220
A + +EM+ G
Sbjct: 332 AYLLLDEMIQKG 343
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 4/202 (1%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A K G E E +L M + P+ + L + R A + M G
Sbjct: 138 LLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAG 196
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P TY + TF + EA ++F+ +++ A P K F +MI K E
Sbjct: 197 HKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAE 256
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ ++ M TY + M E K D+M G PD+V+Y +
Sbjct: 257 ECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFL 316
Query: 198 NAYGKARREEEALAVFEEMLDA 219
+ R+ +EAL ++ M+++
Sbjct: 317 RVLCENRKTDEALKLYGRMVES 338
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYA---PNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
I + G +EA + +M G A P + ++ A + + + RM +
Sbjct: 208 IDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIS 267
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G P TY+ +++ K EA + + + S++ P PD ++ + + +
Sbjct: 268 TGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM-SNKGYP--PDIVTYNCFLRVLCENRK 324
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVS-KIYDQMQRSGLQPDVVSYAL 195
++A K++ M + S TYN L+S FE + + + + +M + DV +Y
Sbjct: 325 TDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCA 384
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
+IN R +EA + EE+++ G+
Sbjct: 385 MINGLFDCHRAKEACFLLEEVVNKGL 410
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + + G F++A K+ M++ NVV+ +L+ + R + +FR+MQ
Sbjct: 277 LLKLYMESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM 332
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
S T IL +E+ +L + KPD + + ++ MY K G E
Sbjct: 333 IGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE---KPDVPLLNSLMDMYGKCGEVE 389
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
+R++F +M +++ + N + N +EV +++ M SG+ PD +++ L++
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNC-YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
Query: 201 GKARREEEALAVFEEM 216
E L++FE M
Sbjct: 449 SDTGLTEYGLSLFERM 464
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 13/174 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT-L 79
++ + GN E + +M + G AP+ ++ AL+ G ++F RM+T
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
P+ Y ++ K KEA +V E + P KP ++ ++ R GN
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETM------PFKPSASIWGSLLNSCRLHGNV 522
Query: 140 E----KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPD 189
A+++F L P + V +++ + + V KI + M++ G++ +
Sbjct: 523 SVGEIAAKELFVLEPHN--PGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKE 574
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 7 TQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRY 66
TQ+ +E+ +LI + +EA +L M PNV ++T L++A G+
Sbjct: 217 TQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQK 276
Query: 67 NNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMF 126
+ A +F++M G +P Y +++++F G+ EA + E +L + L P+ +
Sbjct: 277 SEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN---GLMPNVITY 333
Query: 127 HMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS 166
+ +I + K N KA + S M ++ + +TYN+L++
Sbjct: 334 NALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIA 372
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K G EA++ +T++ + G P+ ++T+ + + R + A +F+ M G
Sbjct: 161 LVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG 220
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ ++Y ++ E K EA + + D P + + + ++I +G
Sbjct: 221 CHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCP---NVRTYTVLIDALCGSGQKS 277
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM-SFET--NYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +F M++ I Y L+ SF + E S + + M +GL P+V++Y LI
Sbjct: 278 EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALI 337
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ K + +A+ + +ML+
Sbjct: 338 KGFCK-KNVHKAMGLLSKMLE 357
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 6/198 (3%)
Query: 2 LEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYG 61
+ WL Q D IT H ++ + A K+ M + G N VS+T L+
Sbjct: 178 VTWL-IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF 236
Query: 62 RGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKP 121
+ + A ++ +M+ P+ TY +++ + EA +F+ + + +KP
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM---SESGIKP 293
Query: 122 DQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVSKIYD 179
D M+ ++I + ++A + M + + + +TYN+L+ + N + +
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLS 353
Query: 180 QMQRSGLQPDVVSYALLI 197
+M L PD+++Y LI
Sbjct: 354 KMLEQNLVPDLITYNTLI 371
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + ++GN E ++ ++ G N V++ L+ + ++ E I M
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +TY I++ + A + F +L E+ L PD ++ ++ K G +
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQML--EQKCL-PDIVTYNTVLGAMSKEGMVD 401
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ L+ P +TYNS+ ++ + K+ ++Y QM +G+ PD ++ LI
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+ +A EEA V +E + G
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRG 484
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFR----RMQTLGPE 82
K+G+ A +L M+ G P+V+++ ++ Y NAE R ++Q G
Sbjct: 186 KKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD---YGNAEQAIRFWKDQLQN-GCP 241
Query: 83 PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKA 142
P +TY ++++ A EV E + + PD ++ ++ + GN E+
Sbjct: 242 PFMITYTVLVELVCRYCGSARAIEVLEDMAVE---GCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 143 RKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLINA 199
+ + + +TVTYN+L+ +++ EV +I + M ++ P V++Y +LIN
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 200 YGKARREEEALAVFEEMLD 218
KAR A+ F +ML+
Sbjct: 359 LCKARLLSRAIDFFYQMLE 377
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 6/191 (3%)
Query: 34 AEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILK 93
A ++L M G P++V++ +L+ R G ++ + + + G E + +TY +L
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 94 TFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQRE 153
+ + E EE+ + P ++++I KA +A F M +++
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCP---TVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 154 IPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
VTYN++ MS E + ++ ++ + P +++Y +I+ K ++AL
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 211 AVFEEMLDAGV 221
++ +MLDAG+
Sbjct: 440 ELYHQMLDAGI 450
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+L+ K+G+ E EK+L + K G PN+ ++ ++ + G + A + +
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
GP+P +TY ++ + +KF+EAE ++++ L+PD ++ +I Y K G
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG---LEPDSYTYNTLIAGYCKGGMV 337
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALL 196
+ A ++ TY SL+ + E ++ ++++ G++P+V+ Y L
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I EA + EM + G+
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGL 422
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 7/204 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + Q A +IL M G P+V ++ +L+ + ++ + ++ M G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ T+ I+L++ K EA + E + + + PD F +I + K G+ +
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEM---KNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 141 KARKMFSLMTQR-EIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPDVVSYALL 196
A +F M + ++ ST TYN ++ T N K++ +M L PD +Y L+
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 197 INAYGKARREEEALAVFEEMLDAG 220
++ + K EM++ G
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENG 667
Score = 63.9 bits (154), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +G N A + G PNV+ + L++ G A + M G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P T+ I++ + +A+ + + ++S P D F+++I+ Y E
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP---DIFTFNILIHGYSTQLKME 478
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A ++ +M + TYNSL++ + +++V + Y M G P++ ++ +L+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + R+ +EAL + EEM + V
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSV 562
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI QG EA ++ M++ G P V + L+ + G ++A+ + + M + G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P T+ I++ + K + A E+ + +L + + PD ++ ++ K +E
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG---VDPDVYTYNSLLNGLCKTSKFE 513
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+ + M ++ + T+N L+ Y+++ + + ++M+ + PD V++ LI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 198 NAYGKARREEEALAVFEEMLDA 219
+ + K + A +F +M +A
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEA 595
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSH------TALMEAYGRGGRYNNAEAIFR 74
+I G G F E++L M + NV +H M+ YGR G+ A +F
Sbjct: 46 VIEKLGYYGKFEAMEEVLVDMRE-----NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFE 100
Query: 75 RMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYR 134
RM EP+ +Y I+ V+ F +A +V+ + +R + PD F + + +
Sbjct: 101 RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY--MRMRDRG-ITPDVYSFTIRMKSFC 157
Query: 135 KAGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYK-EVSKIYDQMQRSGLQPDVV 191
K A ++ + M+ + + V Y +++ +E N+K E +++ +M SG+ +
Sbjct: 158 KTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS 217
Query: 192 SYALLINAYGKARREEEALAVFEEMLDAGV 221
++ L+ K +E + ++++ GV
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 25 HGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPS 84
+G++G EA + M+ P V S+ A+M G ++ A ++ RM+ G P
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 85 ALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARK 144
++ I +K+F + ++ A + + S +++ Y G YE+ K
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCE--------MNVVAYCTVVGGFYEENFK 197
Query: 145 -----MFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+F M + T+N L+ + + KE K+ D++ + G+ P++ +Y L
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 197 INA 199
I
Sbjct: 258 IQG 260
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 10/205 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAP-----NVVSHTALMEAYGRGGRYNNAEAIFRR 75
++ A + G F+EA K+ + K P N+ + ++ Y GG++ A +FR+
Sbjct: 316 VLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 76 MQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRK 135
M P L++ ++ + EAE+++ + E +KPD+ + +++ K
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM---EEKNVKPDEYTYGLLMDTCFK 432
Query: 136 AGNYEKARKMFSLMTQREIPHSTVTYNSLMS--FETNYKEVSKIYDQMQRSGLQPDVVSY 193
G ++ + M + + + YN L + + +K + M S L+ D +Y
Sbjct: 433 EGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAY 492
Query: 194 ALLINAYGKARREEEALAVFEEMLD 218
++ A +A R +E L + +EMLD
Sbjct: 493 KFIMRALSEAGRLDEMLKIVDEMLD 517
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 84 SALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP--LKPDQKMFHMMIYMYRKAGNYEK 141
SA+ Y +L+ E KF EA ++F+ + + P L + F++M+ Y G +E+
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 142 ARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPDVVSYALLIN 198
A ++F M + T+++N+LM+ + + E K+Y +M+ ++PD +Y LL++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 199 AYGKARREEEALAVFEEMLDAGV 221
K + +E A ++ M+++ +
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNL 451
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 37/227 (16%)
Query: 30 NFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQ 89
N AE +L ++G P+V+++ L++ Y R + A A+ RRM+ G EP TY
Sbjct: 28 NLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYN 87
Query: 90 IILKTFVEGNKFKEAEEVFEPLLSDERAP------------------------------- 118
++ + ++F+ +L +P
Sbjct: 88 SLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHL 147
Query: 119 --LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK 176
L P +++++ K+G+ + A ++F + R P +TYN L++ + V
Sbjct: 148 AGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPE-LMTYNILINGLCKSRRVGS 206
Query: 177 I---YDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ ++++SG P+ V+Y ++ Y K +R E+ L +F +M G
Sbjct: 207 VDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 100 KFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTV 159
KF+ E L+ R + PD ++ +I Y + ++A + M + I
Sbjct: 25 KFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVT 84
Query: 160 TYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEE 215
TYNSL+S V +++D+M SGL PD+ SY L++ Y K R EA + E
Sbjct: 85 TYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE 143
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 9/201 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI K + ++ + K GY PN V++T +++ Y + R +F +M+ G
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLL-SDERAPLKPDQKMFHMMIYMYRKAGNY 139
++ ++ + +EA E L+ S R+ D ++ ++ +Y K GN
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRS---QDIVSYNTLLNLYFKDGNL 310
Query: 140 EKARKMFSLMTQREIPHS----TVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
+ + + + + T+ N L++ N K + G+QP VV+
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNI-GNTGGAEKHLACIGEMGMQPSVVTCNC 369
Query: 196 LINAYGKARREEEALAVFEEM 216
LI+ KA + A+ +F M
Sbjct: 370 LIDGLCKAGHVDRAMRLFASM 390
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ +GK G +EA +L M + N VS T ++ Y + GR + A +F+RM
Sbjct: 188 LLAGYGKVGEMDEARSLLEMMP--CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP +T +L + + E + + D R + + + +I MY K+GN
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYV--DHRG-MNRAVSLNNAVIDMYAKSGNIT 302
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALLI 197
KA +F + +R + VT+ ++++ + E ++++M ++G++P+ V++ ++
Sbjct: 303 KALDVFECVNERNV----VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
Query: 198 NA 199
+A
Sbjct: 359 SA 360
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + + G + A ++ M G +V + TA++ G A +FR+M G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A+T + + EV + + D + + ++ MY K G E
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAV---KMGFIDDVLVGNSLVDMYSKCGKLE 404
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVVSYALLI 197
ARK+F + +++ T+NS+++ K Y+ +MQ + L+P+++++ +I
Sbjct: 405 DARKVFDSVKNKDV----YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 198 NAYGKARREEEALAVFEEM 216
+ Y K E EA+ +F+ M
Sbjct: 461 SGYIKNGDEGEAMDLFQRM 479
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 13 FSEMD---SIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNA 69
F+E D +L++ + K G +A K+ M + N+ + +A++ AY R R+
Sbjct: 110 FTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREV 165
Query: 70 EAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMM 129
+FR M G P + IL+ + + + ++ + + ++ + +
Sbjct: 166 AKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI---KLGMSSCLRVSNSI 222
Query: 130 IYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNS-LMSFETN--YKEVSKIYDQMQRSGL 186
+ +Y K G + A K F M +R++ + +NS L+++ N ++E ++ +M++ G+
Sbjct: 223 LAVYAKCGELDFATKFFRRMRERDV----IAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 187 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
P +V++ +LI Y + + + A+ + ++M G+
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGI 313
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 40/229 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+IT + + G +A ++ T M PN+++ ++ Y + G A +F+RM+ G
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 81 P-EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP--------------------- 118
+ + T+ +I+ +++ K EA E+F + P
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV 543
Query: 119 -------LKPDQKMFHM----MIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
L+ + H + Y K+G+ E +R +F M ++I +T+NSL+
Sbjct: 544 REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDI----ITWNSLIGG 599
Query: 167 --FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
+Y +++QM+ G+ P+ + + +I A+G +E VF
Sbjct: 600 YVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K ++E++ + + Y + +S +L+ Y + GRYN A +FR+M T
Sbjct: 247 LVDMYAKSARIEDSERVFSRL----YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK 302
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P A+ + ++ +++ +L R + + ++ MY K GN +
Sbjct: 303 VKPGAVAFSSVIPACAHLATLHLGKQLHGYVL---RGGFGSNIFIASALVDMYSKCGNIK 359
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
ARK+F M + V++ +++ + + E ++++M+R G++P+ V++ ++
Sbjct: 360 AARKIFDRMNVLD----EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 415
Query: 198 NAYGKARREEEALAVFEEM 216
A +EA F M
Sbjct: 416 TACSHVGLVDEAWGYFNSM 434
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
+VVS+ ++ Y + G Y +A + R M T +P + T +L F E + +E+
Sbjct: 170 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 229
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF- 167
++ R + D + ++ MY K+ E + ++FS + R+ +++NSL++
Sbjct: 230 GYVI---RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD----GISWNSLVAGY 282
Query: 168 --ETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
Y E +++ QM + ++P V+++ +I A
Sbjct: 283 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 316
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 4/196 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L + + G +A ++ M + G APNVVS TA+ + G + NA +F +MQ G
Sbjct: 64 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 123
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+A T +LK + +EV L R L D + ++ MY K+G+ +
Sbjct: 124 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCL---RKNLICDAYVATALVDMYGKSGDLQ 180
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
A ++F + + + F + ++ + M +G++PD +++ +++
Sbjct: 181 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAA-FSVMLEAGMEPDAITFTSVLSVC 239
Query: 201 GKARREEEALAVFEEM 216
+ +E F+ M
Sbjct: 240 KNSGLVQEGWKYFDLM 255
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 35/197 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNK-MGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
L+ + KQ + AE +L M + G P+VVS+ +++ A A F M+T
Sbjct: 493 LLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTR 552
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G P+ ++Y ++K F + K A VF+ +++D R +K D ++M++ Y + G
Sbjct: 553 GIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR--VKVDLIAWNMLVEGYCRLGLI 610
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
E A+++ S +M+ +G P+V +Y L N
Sbjct: 611 EDAQRVVS--------------------------------RMKENGFYPNVATYGSLANG 638
Query: 200 YGKARREEEALAVFEEM 216
+AR+ +AL +++E+
Sbjct: 639 VSQARKPGDALLLWKEI 655
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 83 PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKA 142
P + Y ++K +++ + + + E + + PD+ + ++ + AG ++A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 143 RKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQR----SGLQPDVVSYALLIN 198
R++ + M + +P + +TYN L+ ++ + D ++ +G++PDVVSY ++I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 199 AYGKARREEEALAVFEEMLDAGV 221
ALA F EM G+
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGI 554
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 97/207 (46%), Gaps = 9/207 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKM---GYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ 77
L+ + K G + ++L M + P+ V++T ++ A+ G + A + M
Sbjct: 420 LMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMA 479
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
+G + +TY ++LK + + + AE++ + D A ++PD ++++I
Sbjct: 480 RMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTED--AGIEPDVVSYNIIIDGCILID 537
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSG-LQPDVVSY 193
+ A F+ M R I + ++Y +LM + K ++++D+M ++ D++++
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAW 597
Query: 194 ALLINAYGKARREEEALAVFEEMLDAG 220
+L+ Y + E+A V M + G
Sbjct: 598 NMLVEGYCRLGLIEDAQRVVSRMKENG 624
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 86/222 (38%), Gaps = 27/222 (12%)
Query: 4 WLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVV---SHTALMEAY 60
W+ T +D +E+ + K +F L +++ NVV S T LM+
Sbjct: 116 WIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCL 175
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPL-LSDERAPL 119
G G A A F RM+ +P Y I+ FK+A + + + L R P
Sbjct: 176 GEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYP- 234
Query: 120 KPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYD 179
PD + ++I Y + G RK + E ++++
Sbjct: 235 -PDTYTYTILISSYCRYGMQTGCRK---------------------AIRRRMWEANRMFR 272
Query: 180 QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+M G PDVV+Y LI+ K R AL +FE+M G
Sbjct: 273 EMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 96/242 (39%), Gaps = 49/242 (20%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF------- 73
+I+ K G E EK+L M + G+ P+ +S++ L+E GR GR N++ IF
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 74 ----------------------------RRMQTLGPEPSALTYQIILKTFVEGNKFKEAE 105
RRM EP+ TY ++ ++G K +A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 106 EVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN----YEKARKMFSLMTQREIPHSTVTY 161
E+FE +LS P F + Y Y+K+RK +++ Y
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISES-------AY 433
Query: 162 NSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
L+ + + + ++D+MQ SG DV Y +++ E A+ V EE +
Sbjct: 434 KLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMR 493
Query: 219 AG 220
G
Sbjct: 494 KG 495
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 18 SIRLITAHGKQGNFNEAEKILTYMN----KMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
SI ++ +GN + E ++T+ + + G +V S++ ++ A GR ++ +
Sbjct: 116 SIDIVADVLNRGNLS-GEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVL 174
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
+ M G P I + +FV + + A E+FE E +K + F+ ++
Sbjct: 175 KGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEE---SESFGVKCSTESFNALLRCL 231
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDV 190
+ + A+ +F+ + IP + +YN ++S + EV K+ +M SG PD
Sbjct: 232 CERSHVSAAKSVFN-AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDC 290
Query: 191 VSYALLINAYGKARREEEALAVFEEMLDAG 220
+SY+ LI G+ R +++ +F+ + G
Sbjct: 291 LSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 14 SEMDSIR---LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAE 70
SE DS R LI A G+ +E ++L K G P + L+ + G Y
Sbjct: 209 SEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMS 268
Query: 71 AIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
+ M PS YQ I+K K EA +F+ L A PD+ ++ MI
Sbjct: 269 EVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA---PDRVVYTTMI 325
Query: 131 YMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKI---YDQMQRSGLQ 187
+ + G ARK++ M ++ + + YN ++ E+S + Y++M R+G
Sbjct: 326 RGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYG 385
Query: 188 PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
++S +I + + +EA +F+ M + GV
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV 419
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
EA I + GYAP+ V +T ++ + G +A ++ M G P+ Y +++
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
+ + E + +L R + MI + G ++A ++F M++
Sbjct: 361 HGHFKRGEISLVEAFYNEML---RNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSET 417
Query: 153 EIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ + +TYN+L+ E ++ K+Y +++ GL+P ++YA L+
Sbjct: 418 GVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I H K+G + E M + GY ++S +++ + G+ + A IF+ M G
Sbjct: 359 MIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETG 418
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPL 111
P+A+TY ++K F + NK ++ ++++ L
Sbjct: 419 VTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G N AE + + K S ++ +Y G + A ++ +M ++G
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQK----DVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +T+ +L + ++ +++ LS + L+ D+ + ++ MY K GN +
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIH---LSISESRLETDELLLSALLDMYSKCGNEK 462
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
+A ++F+ + ++++ TV ++ S +E +D+MQ+ GL+PD V+ +++A
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGS-HGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521
Query: 201 GKARREEEALAVFEEM 216
G A +E L F +M
Sbjct: 522 GHAGLIDEGLKFFSQM 537
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 105/212 (49%), Gaps = 16/212 (7%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
S+ ++ A + N + I Y+ + ++ + +L++ Y + G N AE +F
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 74 RRMQTLGPEPSALTYQIILKTFVE-GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYM 132
+ Q + A ++ +++ +++ GN FK A EV++ ++S +KPD F ++
Sbjct: 368 SKTQ----KDVAESWNVMISSYISVGNWFK-AVEVYDQMVS---VGVKPDVVTFTSVLPA 419
Query: 133 YRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFET---NYKEVSKIYDQMQRSGLQPD 189
+ EK +++ +++ + + ++L+ + N KE +I++ + + D
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK----D 475
Query: 190 VVSYALLINAYGKARREEEALAVFEEMLDAGV 221
VVS+ ++I+AYG + EAL F+EM G+
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGL 507
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 33 EAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIIL 92
E I Y + G+ P++V TAL++ YG G+ +AE IF RM E + +++ I+
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM----AEKNVISWNSII 403
Query: 93 KTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
+V+ K A E+F+ L + L PD ++ Y ++ + + R++ + + +
Sbjct: 404 AAYVQNGKNYSALELFQELWD---SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 153 EIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEA 209
+T+ NSL+ + + ++ K ++ + L DVVS+ +I AY +
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHI----LLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 210 LAVFEEMLDAGV 221
+ +F EM+ + V
Sbjct: 517 VWLFSEMIASRV 528
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGY-APNVVSHTALMEAYGRGGRYNN--AEAIFRRMQ 77
I G G +EA + + +MG PN ++ L+EA + + EA + M+
Sbjct: 147 FIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMR 206
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
G T +L+ + K + A VF +LS R L D+ + +++ + K G
Sbjct: 207 DCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILS--RGWL--DEHISTILVVSFCKWG 262
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYA 194
+KA ++ ++ +R+I + TY L+ E+ + +++++M+R G+ D+ Y
Sbjct: 263 QVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYD 322
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
+LI K + E AL+++ E+ +G+
Sbjct: 323 VLIGGLCKHKDLEMALSLYLEIKRSGI 349
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 6/193 (3%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ G +A K L + G+ ++V+ TA ++ + + +FR + G P +
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMF 146
Y +++K + + EA+ +F ++S LKP ++ MI + K G ++
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKG---LKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 147 SLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKA 203
M + E +TY SL + E +++M+ P+ +++ LI K
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 204 RREEEALAVFEEM 216
EAL F EM
Sbjct: 733 GWSGEALVYFREM 745
Score = 47.0 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 16/154 (10%)
Query: 71 AIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
+++ +M G P +TY ++K+ + K + ++ ++ L+ D + + +I
Sbjct: 840 SVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV---KSGLEWDLFICNTLI 896
Query: 131 YMYRKAGNYEKARKMFSLMTQREIPHST-VTYNSLMSFETNYKEVSK---IYDQMQRSGL 186
+MY + ARK+F E+PH VT+NS++ +V ++D+M
Sbjct: 897 HMYGSFRDQASARKLFD-----EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS---- 947
Query: 187 QPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ DVV+++ +I+ Y K +AL +F++M+ G
Sbjct: 948 ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 981
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 27 KQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL 86
+ G +EA+ + M G PN++S T +M + G A R+MQ G P+A
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 87 TYQIILKTFVEGNKFKEAEEVFEPLLSD-ERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
+ + L + ++ + + + L + ++ MY K G+ KA K+
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET---SLVDMYAKCGDINKAEKV 604
Query: 146 FSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARR 205
F E+P S S + N KE +Y ++ GL+PD ++ +++A A
Sbjct: 605 FGSKLYSELPLSNAMI-SAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGD 663
Query: 206 EEEALAVFEEML 217
+A+ +F +++
Sbjct: 664 INQAIEIFTDIV 675
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K G+ N+AEK+ + +K+ Y+ +S+ A++ AY G A A++R ++ +G
Sbjct: 588 LVDMYAKCGDINKAEKV--FGSKL-YSELPLSN-AMISAYALYGNLKEAIALYRSLEGVG 643
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +T +L +A E+F ++S + +KP + + +M+ + AG E
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVS--KRSMKPCLEHYGLMVDLLASAGETE 701
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQP---DVVSYALLI 197
KA ++ M + P + + + + S N + +++ D + R L+ + +Y +
Sbjct: 702 KALRLIEEMPFK--PDARMIQSLVAS--CNKQRKTELVDYLSRKLLESEPENSGNYVTIS 757
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
NAY +E + + E M G+
Sbjct: 758 NAYAVEGSWDEVVKMREMMKAKGL 781
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 45/229 (19%)
Query: 26 GKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSA 85
K F E ++I ++ K+G ++ HT+L+ Y + GR +A +F + P
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK----SPHRDV 200
Query: 86 LTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
++Y ++K + + A+++F+ + P+K D ++ MI Y + GNY++A ++
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEI------PVK-DVVSWNAMISGYAETGNYKEALEL 253
Query: 146 FSLMTQREIPHSTVTYNSLMS----------------------FETNYKEVSKIYDQMQR 183
F M + + T +++S F +N K V+ + D +
Sbjct: 254 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 313
Query: 184 SG------------LQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
G DV+S+ LI Y +EAL +F+EML +G
Sbjct: 314 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Score = 54.3 bits (129), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 53/217 (24%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ + + G +A K+ +K + +VVS+TAL++ Y G NA+ +F +
Sbjct: 175 LISMYVQNGRLEDAHKVF---DKSPHR-DVVSYTALIKGYASRGYIENAQKLFDEI---- 226
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQ----------------- 123
P +++ ++ + E +KEA E+F+ ++ + ++PD+
Sbjct: 227 PVKDVVSWNAMISGYAETGNYKEALELFKDMM---KTNVRPDESTMVTVVSACAQSGSIE 283
Query: 124 ------------------KMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
K+ + +I +Y K G E A +F + +++ +++N+L+
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV----ISWNTLI 339
Query: 166 SFETN---YKEVSKIYDQMQRSGLQPDVVSYALLINA 199
T+ YKE ++ +M RSG P+ V+ ++ A
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
PN++ + + +A ++ M +LG P++ T+ +LK+ + FKE +++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
+L + D + +I MY + G E A K+F R++ V+Y +L+
Sbjct: 157 HGHVL---KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV----VSYTALIKG 209
Query: 167 -FETNYKE-VSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
Y E K++D++ DVVS+ +I+ Y + +EAL +F++M+ V
Sbjct: 210 YASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 51 VSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEP 110
VS T+ + R GR A F M G EP+ +T+ +L F E
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEALGD 93
Query: 111 LLSDERAPLKPDQKMFHMM-----IYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
LL L D+ H+M I MY K G ++KAR +F M + ++VT+N+++
Sbjct: 94 LLHGYACKLGLDRN--HVMVGTAIIGMYSKRGRFKKARLVFDYMEDK----NSVTWNTMI 147
Query: 166 SFETNYKEV---SKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+V +K++D+M + D++S+ +IN + K +EEAL F EM +GV
Sbjct: 148 DGYMRSGQVDNAAKMFDKMP----ERDLISWTAMINGFVKKGYQEEALLWFREMQISGV 202
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 98/234 (41%), Gaps = 53/234 (22%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I + K+G F +A + YM N V+ +++ Y R G+ +NA +F +M
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMED----KNSVTWNTMIDGYMRSGQVDNAAKMFDKM---- 166
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPD------------------ 122
PE +++ ++ FV+ +EA F + + + +KPD
Sbjct: 167 PERDLISWTAMINGFVKKGYQEEALLWFREM---QISGVKPDYVAIIAALNACTNLGALS 223
Query: 123 -----------------QKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
++ + +I +Y + G E AR++F M +R + V++NS++
Sbjct: 224 FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV----VSWNSVI 279
Query: 166 ---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
+ N E + +MQ G +PD V++ + A EE L F+ M
Sbjct: 280 VGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMG-YAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
+I A + ++E+ + Y K PNVVS+ ++ A+ G + A ++R +
Sbjct: 186 IIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILAN 245
Query: 80 GP-EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
P PS++TY+ + K V+ + +A + +LS +A D +++ +I Y G+
Sbjct: 246 APFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQA---ADSTVYNNLIRGYLDLGD 302
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYAL 195
++KA + F + + + + + M + + N KE + Y + + + +
Sbjct: 303 FDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNV 362
Query: 196 LINAYGKARREEEALAVFEEMLD 218
L+ + K +++EA A+F EMLD
Sbjct: 363 LLEVFLKFGKKDEAWALFNEMLD 385
Score = 47.0 bits (110), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 20 RLITAHGKQGNFNEAEKILTY-MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
++I AH +GN +EA ++ + + +AP+ V++ L + + GR +A ++ R M +
Sbjct: 221 QIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLS 280
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G + Y +++ +++ F +A E F+ L S + + M Y + K +
Sbjct: 281 KGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKS--KCTVYDGIVNATFMEYWFEKGND 338
Query: 139 YEKARKMFSLMTQR---EIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVS--- 192
E SL+ ++ P V + F E ++++M + P+++S
Sbjct: 339 KEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKK-DEAWALFNEMLDNHAPPNILSVNS 397
Query: 193 --YALLINAYGKARREEEALAVFEEM 216
+++N K EA+ F+++
Sbjct: 398 DTVGIMVNECFKMGEFSEAINTFKKV 423
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
Query: 31 FNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQI 90
+AEK+ M M P VV++ L+E Y R R A + M+ E + + +
Sbjct: 266 LKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNP 325
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
I+ E + EA + E E P ++ ++ + KAG+ A K+ +M
Sbjct: 326 IIDGLGEAGRLSEALGMMERFFVCESG---PTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 151 QREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREE 207
R + +T TYN + + + + + +Y ++ +G PD ++Y L++ + +
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 208 EALAVFEEMLDAGV 221
A+ V +EM + G+
Sbjct: 443 LAMQVNKEMKNRGI 456
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMG------YAPNVVSHTALMEAYGRGGRYNNAEAIFR 74
L+ A K+G+ EA Y+ ++G + P+V L+ + R + AE ++
Sbjct: 218 LLDALCKEGHVREAS---MYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 75 RMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYR 134
M+ + +P+ +TY +++ + + + A EV E + + A ++ + +F+ +I
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEM---KMAEMEINFMVFNPIIDGLG 331
Query: 135 KAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQMQRSGLQPDVV 191
+AG +A M E + VTYNSL+ ++ SKI M G+ P
Sbjct: 332 EAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTT 391
Query: 192 SYALLINAYGKARREEEALAVFEEMLDAG 220
+Y + K + EE + ++ ++++AG
Sbjct: 392 TYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 35/201 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I G+ G +EA ++ P +V++ +L++ + + G A I + M T G
Sbjct: 326 IIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRG 385
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ TY K F + NK +E ++ L+ A PD+ +H+++ M + G
Sbjct: 386 VDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE---AGHSPDRLTYHLILKMLCEDGK-- 440
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
SL Q + +M+ G+ PD+++ +LI+
Sbjct: 441 -----LSLAMQ-------------------------VNKEMKNRGIDPDLLTTTMLIHLL 470
Query: 201 GKARREEEALAVFEEMLDAGV 221
+ EEA F+ + G+
Sbjct: 471 CRLEMLEEAFEEFDNAVRRGI 491
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A + G+ A +++ G+ +V + M + +++ M +LG
Sbjct: 154 LVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLG 213
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ T+ +++ +F + +K EA VF +L + + P+ F+MMI K G+
Sbjct: 214 YVENVNTFNLVIYSFCKESKLFEALSVFYRML---KCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 141 KARKMFS---LMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYA 194
A ++ +M+ + + VTYNS+++ + +I M +SG+ + +Y
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
L++AYG+A +EAL + +EM G+
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGL 357
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K G + AE+I M K G N ++ AL++AYGR G + A + M + G
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 81 PEPSALTYQ-IILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+ + Y I+ F+EG + E L ++ D+ +++ + G
Sbjct: 357 LVVNTVIYNSIVYWLFMEG----DIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYV 412
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALL 196
++A + ++++++ V +N+LM K+++ +I M GL D +S+ L
Sbjct: 413 KEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTL 472
Query: 197 INAYGKARREEEALAVFEEML 217
I+ Y K + E AL +++ M+
Sbjct: 473 IDGYLKEGKLERALEIYDGMI 493
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K+G A +I M KM N+V + +++ + G AEA+ M+
Sbjct: 472 LIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI-- 529
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+TY +L ++ +EA+++ + + F++MI K G+YE
Sbjct: 530 --KDIVTYNTLLNESLKTGNVEEADDILSKM-QKQDGEKSVSLVTFNIMINHLCKFGSYE 586
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQP 188
KA+++ M +R + ++TY +L++ + ++ +V +++D + G+ P
Sbjct: 587 KAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ ++G E +IL+ M G N+VS ++ + R G + A +F+++ LG
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P +T +L + + + ++ + L D+ + MI MY K+G+
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI---KQGLLKDKCVISAMIDMYGKSGH-- 302
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN--YKEVSKIYDQMQRSGLQPDVVSYALLIN 198
+ SL Q E+ + V + N + ++++ + ++ +VVS+ +I
Sbjct: 303 -VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 199 AYGKARREEEALAVFEEMLDAGV 221
+ ++ EAL +F EM AGV
Sbjct: 362 GCAQNGKDIEALELFREMQVAGV 384
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 18 SIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ 77
S +LI ++ FN+A+ +L + P + S ++L+ A + + + +F RM
Sbjct: 53 SAKLIASYSNYNCFNDADLVLQSIPD----PTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
+ G P + + K E + FK +++ + L D + M +MY + G
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIH---CVSCVSGLDMDAFVQGSMFHMYMRCG 165
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYA 194
ARK+F M+ +++ VT ++L+ + + +EV +I +M+ SG++ ++VS+
Sbjct: 166 RMGDARKVFDRMSDKDV----VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221
Query: 195 LLINAYGKARREEEALAVFEEMLDAG 220
+++ + ++ +EA+ +F+++ G
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLG 247
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
IT + G ++A ++ + NVVS T+++ + G+ A +FR MQ G
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
+P+ +T +L + R L + + +I MY K G
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAV---RVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 142 ARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
++ +F++M + + V +NSLM S KEV I++ + R+ L+PD +S+ L++
Sbjct: 442 SQIVFNMMPTKNL----VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 199 AYGKARREEEALAVFEEM 216
A G+ +E F+ M
Sbjct: 498 ACGQVGLTDEGWKYFKMM 515
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 5/200 (2%)
Query: 24 AHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEP 83
+ + ++L M G P+ V+ + + GR + A+ + + + P
Sbjct: 133 CRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP 192
Query: 84 SALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKAR 143
TY +LK + E + + D +KPD F ++I + N +A
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD--VKPDLVSFTILIDNVCNSKNLREAM 250
Query: 144 KMFSLMTQREIPHSTVTYNSLM-SFETNYK--EVSKIYDQMQRSGLQPDVVSYALLINAY 200
+ S + YN++M F T K E +Y +M+ G++PD ++Y LI
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 201 GKARREEEALAVFEEMLDAG 220
KA R EEA + M+DAG
Sbjct: 311 SKAGRVEEARMYLKTMVDAG 330
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P++VS T L++ A + ++ G +P Y I+K F +K EA V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS 166
++ + + ++PDQ ++ +I+ KAG E+AR M T TY SLM+
Sbjct: 288 YKKM---KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 43 KMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFK 102
KMG ++VS ++ Y + A ++ RM+ G EP A++ +L + +
Sbjct: 268 KMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 103 EAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYN 162
+++ + ER L P+ + + +I MY K G EKAR +F M R++ V++
Sbjct: 327 LGKKIHGYI---ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV----VSWT 379
Query: 163 SLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
+++S F + ++ ++Q SGL PD +++ + A A EE + F+ M D
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G +A + M + +VVS TA++ AYG GR +A A+F ++Q G
Sbjct: 350 LIDMYAKCGCLEKARDVFENMK----SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P ++ + L +E F+ L++D + P + M+ + +AG +
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFK-LMTDHY-KITPRLEHLACMVDLLGRAGKVK 463
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVS-YALLINA 199
+A + M+ P+ V L + + + + L P+ Y LL N
Sbjct: 464 EAYRFIQDMSME--PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521
Query: 200 YGKARREEEALAVFEEMLDAGV 221
Y KA R EE + M G+
Sbjct: 522 YAKAGRWEEVTNIRNIMKSKGL 543
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 43 KMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFK 102
KMG ++VS ++ Y + A ++ RM+ G EP A++ +L + +
Sbjct: 268 KMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 103 EAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYN 162
+++ + ER L P+ + + +I MY K G EKAR +F M R++ V++
Sbjct: 327 LGKKIHGYI---ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV----VSWT 379
Query: 163 SLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
+++S F + ++ ++Q SGL PD +++ + A A EE + F+ M D
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G +A + M + +VVS TA++ AYG GR +A A+F ++Q G
Sbjct: 350 LIDMYAKCGCLEKARDVFENMK----SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P ++ + L +E F+ L++D + P + M+ + +AG +
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFK-LMTDHYK-ITPRLEHLACMVDLLGRAGKVK 463
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVS-YALLINA 199
+A + M+ P+ V L + + + + L P+ Y LL N
Sbjct: 464 EAYRFIQDMSME--PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521
Query: 200 YGKARREEEALAVFEEMLDAGV 221
Y KA R EE + M G+
Sbjct: 522 YAKAGRWEEVTNIRNIMKSKGL 543
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I A K+G +A ++ M P+V +++A R A +FR + G
Sbjct: 288 MINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKG 347
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPL--LSDERAPLKPDQKMFHMMIYMYRKAGN 138
P+P+ +TY +LK K + E+V+E + + + P+ F Y+ + +
Sbjct: 348 PDPNVVTYNSLLKHLC---KIRRTEKVWELVEEMELKGGSCSPNDVTFS---YLLKYSQR 401
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYAL 195
+ + M + + ++ YN + + ++V +I+ +M+RSGL PD +Y +
Sbjct: 402 SKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTI 461
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
I+ + EAL+ F+EM+ G+
Sbjct: 462 RIHGLHTKGKIGEALSYFQEMMSKGM 487
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 7/203 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ GK F E ++ M+K N ++ L+ Y + + A +F R + G
Sbjct: 149 ILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFG 208
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + + +L ++K E E L R D K +M++ + GN
Sbjct: 209 IDDDLVAFHGLLMWLC---RYKHV-EFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A++ + + + V+Y ++++ T ++ K +Y M + PDV +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 198 NAYGKARREEEALAVFEEMLDAG 220
+A +R EAL VF E+ + G
Sbjct: 325 DALCFKKRIPEALEVFREISEKG 347
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5949006-5949644 REVERSE
Length = 212
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 36/179 (20%)
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+F+ M+ + Y II+ + KF EA +F LL + L+PD + ++MMI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLI---SGLQPDVQTYNMMI- 56
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM--------------------SFET-- 169
+ + +A K+++ M +R + T+TYNS++ +F T
Sbjct: 57 ---RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLI 113
Query: 170 -NYKEVSKIYD------QMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
Y + +++ D +M R G+ +V++Y LI+ + + AL +F+EM+ GV
Sbjct: 114 NGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
>AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22704630-22706126 REVERSE
Length = 498
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 7/176 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A + EA I ++ + P+V + L+ + G E + M G
Sbjct: 182 LLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRG 240
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+++TY I + F + F EA +FE + +R ++ +I+ A N
Sbjct: 241 FKPNSVTYGIRIDGFCKKRNFGEALRLFEDM---DRLDFDITVQILTTLIHGSGVARNKI 297
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSY 193
KAR++F +++R + YN+LMS +VS K+ +M+ G++PD V++
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
I E L ++ D M+ L+ + G+ E M K G+ PN V++ ++ +
Sbjct: 198 IFEKLHSRFNPDVKTMNI--LLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGF 255
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEG-----NKFKEAEEVFEPLLSDE 115
+ + A +F M L + +T QI L T + G NK K A ++F+ +
Sbjct: 256 CKKRNFGEALRLFEDMDRLDFD---ITVQI-LTTLIHGSGVARNKIK-ARQLFDEI---S 307
Query: 116 RAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM-----SFETN 170
+ L PD ++ ++ K G+ A K+ M ++ I +VT++S+ S E
Sbjct: 308 KRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFG 367
Query: 171 YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ V + Y +M+ L P + +L+ + L +++ ML+ G
Sbjct: 368 FNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFS 147
+ I+L+ F + KEA +FE L S PD K ++++ +++AG+ +
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR----FNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 148 LMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKAR 204
M +R ++VTY + + N+ E ++++ M R V LI+ G AR
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 205 REEEALAVFEEMLDAGV 221
+ +A +F+E+ G+
Sbjct: 295 NKIKARQLFDEISKRGL 311
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 7/170 (4%)
Query: 56 LMEAYGRGGRYNNAEAIFRRMQTLG-PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD 114
+ Y G + A +F +G + ++ TY ++ +FV+ F+ A V + + +
Sbjct: 600 FLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFEN 659
Query: 115 ERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF---ETNY 171
A D ++++I K G + A + +T++ V YN+L++ T
Sbjct: 660 FCAA---DIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRL 716
Query: 172 KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
E ++++D M+ +G+ PDVVSY +I KA + +EA + MLDAG
Sbjct: 717 DEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGC 766
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAI-FRRMQTL 79
L+ + + G F A +L YM ++G N + +++ A + A +I F+ ++
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEAS 192
Query: 80 GPEPSALTYQIILKTFVEG--------------NKFKEAEEVFEPLLSDERAPLKPDQKM 125
T ++I+ +++ G + E + VFE L +R K D
Sbjct: 193 DNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR--FKFDTWS 250
Query: 126 FHMMIYMYRKAGNYEKARKMFSLMTQREIPHST------VTYNSLMSFETNY---KEVSK 176
+++ I+ + G+ + A +F M +R + + TYNSL+ + K+
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 177 IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
++D+++ SG +PD +Y +LI K+ R ++A+ ++ EM
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM 350
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
RL+ +GK +A K+L M + NVVS TA++ Y + G + A +F M
Sbjct: 92 RLLIFYGKCDCLEDARKVLDEMPE----KNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMF--HMMIYMYRKAG 137
+P+ T+ +L + + + +++ ++ D +F ++ MY KAG
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK-----WNYDSHIFVGSSLLDMYAKAG 202
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
++AR++F + +R++ T + +E +++ ++ G+ P+ V+YA L+
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLD-EEALEMFHRLHSEGMSPNYVTYASLL 261
Query: 198 NA 199
A
Sbjct: 262 TA 263
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
I++W H + S L+ + K G EA +I + + +VVS TA++ Y
Sbjct: 179 IVKWNYDSHIFVGSS-----LLDMYAKAGQIKEAREIFECLPER----DVVSCTAIIAGY 229
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLK 120
+ G A +F R+ + G P+ +TY +L ++ +L R L
Sbjct: 230 AQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL---RRELP 286
Query: 121 PDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKI 177
+ + +I MY K GN AR++F M +R + +++N+++ + + +EV ++
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNMPER----TAISWNAMLVGYSKHGLGREVLEL 342
Query: 178 YDQMQ-RSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+ M+ ++PD V+ +++ R E+ L +F+ M+
Sbjct: 343 FRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I G+ G ++A ++ M A + +++AY R G A +F +MQ G
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNA----TWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PS + IL + +V L+ R D + +++ MY K G
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLV---RCQFDDDVYVASVLMTMYVKCGELV 383
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALLI 197
KA+ +F + ++I + +NS++S ++ +E KI+ +M SG P+ V+ ++
Sbjct: 384 KAKLVFDRFSSKDI----IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439
Query: 198 NAYGKARREEEALAVFEEM 216
A A + EE L +FE M
Sbjct: 440 TACSYAGKLEEGLEIFESM 458
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 13 FSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAP--NVVSHTALMEAYGRGGRYNNAE 70
F EM +++ +G + + I+ N P NVVS TA+++ Y + G AE
Sbjct: 71 FDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAE 130
Query: 71 AIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMI 130
++F RM PE + +++ ++ ++ + +A ++++ + P+K +M+
Sbjct: 131 SLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYDMM------PVKDVVASTNMIG 180
Query: 131 YMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDV 190
+ R+ G ++AR +F M +R + VT+ +++ T Y++ +++ + + P+
Sbjct: 181 GLCRE-GRVDEARLIFDEMRERNV----VTWTTMI---TGYRQNNRVDVARKLFEVMPEK 232
Query: 191 --VSYALLINAYGKARREEEALAVFEEM 216
VS+ ++ Y + R E+A FE M
Sbjct: 233 TEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 38 LTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVE 97
+ +K G+ + VS +M Y G+ A A FR+M+ +P+A+T+ I++ E
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Query: 98 GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHS 157
+ + V L+ P + + ++ MY K G E + K F ++ + I
Sbjct: 617 LSALRVGMSVHSSLIQCGFCSQTP---VGNSLVDMYAKCGMIESSEKCFIEISNKYI--- 670
Query: 158 TVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
V++N+++S + S ++ MQ + L+PD VS+ +++A A EE +FE
Sbjct: 671 -VSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFE 729
Query: 215 EM 216
EM
Sbjct: 730 EM 731
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + K G+ ++A + M K P+V + L+ Y R +++ A +FR M+ G
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP+ +++ +++ F+ K +E ++ ++ + + +++ + G +
Sbjct: 259 CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMI---ELGCRFSEATCEILVDGLCREGRVD 315
Query: 141 KARKM-FSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
A + L+ +R +P S Y SL + E ++ +++ + G P ++ L
Sbjct: 316 DACGLVLDLLNKRVLP-SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
+ K+ R E+A E+M++AG+
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNAGI 399
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
SE D L+ + A +++ + K G P ++ T L+E + GR A
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 74 RRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMY 133
+M G P ++T+ ++L+ + +A + LL+ + +PD+ +H+++ +
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR--LLASSKG-YEPDETTYHVLVSGF 448
Query: 134 RKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
K G ++ + + M +++ TYN LM
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 85/233 (36%), Gaps = 35/233 (15%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + + F+ A + M + G PNVVS L+ + G+ + M LG
Sbjct: 234 LINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP-----------LKPDQKMFHMM 129
S T +I++ + +A + LL+ P L + K M
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353
Query: 130 IYM---------------------YRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM--- 165
M RK+G EKA M I +VT+N L+
Sbjct: 354 EMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDL 413
Query: 166 SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 218
+ + +++ G +PD +Y +L++ + K R +E + EMLD
Sbjct: 414 CSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLD 466
>AT5G03560.2 | Symbols: | nucleobase:cation symporter |
chr5:901452-902719 REVERSE
Length = 363
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 1 ILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAY 60
I +RT+ + + +++++ A K G +EA ++ + + P+VV+HTA++EAY
Sbjct: 187 IFHKMRTEGFTN----EAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 61 GRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTF-VEGNKFKEAEEVFEPLLSDERAPL 119
G+ +F RM G P+A TY +++K +G K+A++ ++ + +
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGN---GM 299
Query: 120 KPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
P+ + + + + G E AR++ M
Sbjct: 300 SPNAATYTAVFEAFVREGKEESARELLQEM 329
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 47/232 (20%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ H K + A +I N++G N+V+ A++ Y R G ++A +F M
Sbjct: 305 LLDMHAKCRDIQSARRIF---NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM---- 357
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLS------DE------------------- 115
P+ + +++ ++ + + A E FE ++ DE
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 116 --------RAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS- 166
+ +K + + +I+MY + GN +A+++F M +R++ V+YN+L +
Sbjct: 418 DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDV----VSYNTLFTA 473
Query: 167 FETNYK--EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
F N E + +M+ G++PD V+Y ++ A +A +E +F+ +
Sbjct: 474 FAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+IT K + A K Y ++M +VVS A++ Y + G +A +F M LG
Sbjct: 204 MITGFAKVKDLENARK---YFDRMP-EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEV---FEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
P+ T+ I+ + F+ + L+ ++R L K ++ M+ K
Sbjct: 260 VRPNETTWVIV----ISACSFRADPSLTRSLVKLIDEKRVRLNCFVKT--ALLDMHAKCR 313
Query: 138 NYEKARKMFS-LMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSY 193
+ + AR++F+ L TQR + VT+N+++S T ++S +++D M + +VVS+
Sbjct: 314 DIQSARRIFNELGTQRNL----VTWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSW 365
Query: 194 ALLINAYGKARREEEALAVFEEMLDAG 220
LI Y + A+ FE+M+D G
Sbjct: 366 NSLIAGYAHNGQAALAIEFFEDMIDYG 392
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM-QTLGPEPSALTYQI 90
N+ ++ ++ G P+ S ++++ GR G +F+ + + LG +
Sbjct: 88 NDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFG------ILFQALVEKLGFFKDPYVRNV 141
Query: 91 ILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT 150
I+ +V+ + A +VF+ + + + +++MI Y K GN E+A K+F +M
Sbjct: 142 IMDMYVKHESVESARKVFDQISQRKGSD-------WNVMISGYWKWGNKEEACKLFDMMP 194
Query: 151 QREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEAL 210
+ ++ TV + + + K +D+M + VVS+ +++ Y + E+AL
Sbjct: 195 ENDVVSWTVMITGFAKVK-DLENARKYFDRMP----EKSVVSWNAMLSGYAQNGFTEDAL 249
Query: 211 AVFEEMLDAGV 221
+F +ML GV
Sbjct: 250 RLFNDMLRLGV 260
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
PNV ++ + + + N+ ++ + G P A ++ +++K+ +F +
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS---AGRFG---IL 122
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 167
F+ L+ E+ D + ++++ MY K + E ARK+F ++QR+ V + +
Sbjct: 123 FQALV--EKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKW 180
Query: 168 ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
N +E K++D M + DVVS+ ++I + K + E A F+ M + V
Sbjct: 181 -GNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSV 229
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL-G 80
I + + + + ++ + K + V S AL+ A Y A+ ++ M + G
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP TY ++K F E + + + ER +KP+ F +MI + +
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEM---ERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 141 KARKMFSLMTQREIPHSTVTYN---SLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+ K+ ++M R + TYN + KE + D M +G++P+ V+Y+ LI
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
+ + EEA +F+ M++ G
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGC 323
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 20 RLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTL 79
R+I + G+ + + I+ M + G PN S ++ + + + + M+
Sbjct: 192 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 251
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
G TY I +++ + K KEA+ + + +LS A +KP+ + +I+ + ++
Sbjct: 252 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLS---AGMKPNTVTYSHLIHGFCNEDDF 308
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLM-------SFETNYKEVSKIYDQMQRSGLQPDVVS 192
E+A+K+F +M R + Y +L+ FET +S + M+++ + P
Sbjct: 309 EEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFET---ALSLCKESMEKNWV-PSFSI 364
Query: 193 YALLINAYGKARREEEA 209
L+N K + EEA
Sbjct: 365 MKSLVNGLAKDSKVEEA 381
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 7/211 (3%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
SE ++R I +G+ + + + + + V S AL+ A Y A ++
Sbjct: 110 SESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVY 169
Query: 74 RRMQTL-GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYM 132
M + G EP TY +++ E + + + ER +KP F +MI
Sbjct: 170 LEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEM---ERKWIKPTAASFGLMIDG 226
Query: 133 YRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYK---EVSKIYDQMQRSGLQPD 189
+ K +++ RK+ +M + + TYN ++ K E + D + ++P+
Sbjct: 227 FYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPN 286
Query: 190 VVSYALLINAYGKARREEEALAVFEEMLDAG 220
V+Y+LLI+ + +EA+ +FE M+ G
Sbjct: 287 SVTYSLLIHGFCSEENLDEAMNLFEVMVCNG 317
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I K+ F+E K++ M++ G V ++ +++ + + A+A+ + +
Sbjct: 223 MIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR 282
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+++TY +++ F EA +FE ++ + KPD + + +I+ K G++E
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCN---GYKPDSECYFTLIHCLCKGGDFE 339
Query: 141 KA 142
A
Sbjct: 340 TA 341
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ + K GN +A + M ++ N VS +++ Y + G A +++RM G
Sbjct: 387 LISLYYKSGNLQDARWVFDRMPEL----NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P+ +T+ +L K E +E F + E ++P+ + + MI + +AG E
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTM--KETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSG-----LQPDVVS-YA 194
+A + M + +V + +L+ +K ++ +R+ +QP + Y
Sbjct: 501 EAERFIDAMPYKP---GSVAWAALLGACRKHKNMA----LAERAANELMVMQPLAATPYV 553
Query: 195 LLINAYGKARREEEALAVFEEM 216
+L N Y AR+ EE +V + M
Sbjct: 554 MLANMYADARKWEEMASVRKSM 575
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I KQ ++A+++L M G +P+VV+ + L+ Y + R +N IF M G
Sbjct: 16 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 75
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +TY ++ F + A+++ ++S + PD FH M+ AG
Sbjct: 76 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS---CGVAPDYITFHCML-----AGLCS 127
Query: 141 KA--RKMFSLM 149
K RK F+++
Sbjct: 128 KKELRKAFAIL 138
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 157 STVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVF 213
+T+TYNS++ + + ++ D M G PDVV+++ LIN Y KA+R + + +F
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 214 EEMLDAGV 221
EM G+
Sbjct: 69 CEMHRRGI 76
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 12 DFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
D + M S L++ + G N+A K+ + +VV+ TAL Y GR+ A
Sbjct: 145 DVAAMTS--LLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTTSGRHREAID 198
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+F++M +G +P + +L V E + + + E ++ + + ++
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM---EEMEMQKNSFVRTTLVN 255
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS-FETNY--KEVSKIYDQMQRSGLQP 188
+Y K G EKAR +F M +++I VT+++++ + +N KE +++ QM + L+P
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDI----VTWSTMIQGYASNSFPKEGIELFLQMLQENLKP 311
Query: 189 DVVS 192
D S
Sbjct: 312 DQFS 315
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 43 KMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFK 102
K G+ +V + T+L+ Y GR N+A +F + P+ S +T+ + + + +
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI----PDRSVVTWTALFSGYTTSGRHR 194
Query: 103 EAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYN 162
EA ++F+ ++ +KPD ++ G+ + + M + E+ ++
Sbjct: 195 EAIDLFKKMV---EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 163 SLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+L++ ++ K ++D M ++ D+V+++ +I Y +E + +F +ML
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+A+ + ++ +L +G+ P+VV+ T +ME GR + A + R+++ G
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + ++K + K + A+ F + ER P+ + ++++I Y G +
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEM---ERKGYLPNVETYNLLIAGYCDVGMLD 370
Query: 141 KARKMFSLMTQREIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRS----GLQPDVVSY 193
A F+ M I + T+N+L +S + KI + MQ S G + D Y
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--PY 428
Query: 194 ALLINAYGKARREEEALAVFEEM 216
+I + K R E+AL +M
Sbjct: 429 NCVIYGFYKENRWEDALEFLLKM 451
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + G A++ M + GY PNV ++ L+ Y G ++A F M+T
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ T+ +++ G + + ++ E ++ D ++ +IY + K +E
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILE-MMQDSDTVHGARIDPYNCVIYGFYKENRWE 442
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSF--ETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
A + F L ++ P + L+S + ++ YDQM G P ++ LI+
Sbjct: 443 DALE-FLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 199 AYGKARREEEALAVFEEMLDAG 220
Y + + EE+L + +M+ G
Sbjct: 502 RYSQHGKIEESLELINDMVTRG 523
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 16/187 (8%)
Query: 36 KILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTF 95
K+L M G APN V + L+ A + G+ A ++ M+ EP+ +T+ I++ +
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAY 258
Query: 96 VEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIP 155
K ++ + E S PD ++ + G +A ++ + +
Sbjct: 259 CNEQKLIQSMVLLEKCFS---LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGK 315
Query: 156 HSTVTYNSLMSFETNYKEVSKI------YDQMQRSGLQPDVVSYALLINAYGKARREEEA 209
V N+L+ Y + K+ + +M+R G P+V +Y LLI Y + A
Sbjct: 316 VDVVACNTLVK---GYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSA 372
Query: 210 LAVFEEM 216
L F +M
Sbjct: 373 LDTFNDM 379
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 39 TYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPE-PSALTYQIILKTFVE 97
+ +N++G +PN +H +++ AY A +FR M LGP P ++ +LK
Sbjct: 95 SILNRIG-SPNGFTHNSVIRAYANSSTPEVALTVFREM-LLGPVFPDKYSFTFVLKACAA 152
Query: 98 GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHS 157
F+E ++ + ++ L D + + ++ +Y ++G +E ARK+ M R+
Sbjct: 153 FCGFEEGRQIHGLFI---KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD---- 205
Query: 158 TVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFE 214
V++NSL+S + E ++D+M+ + +V S+ +I+ Y A +EA VF+
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFD 261
Query: 215 EM 216
M
Sbjct: 262 SM 263
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 6 RTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGR 65
R W+F +I+ + G EA+++ M +VVS A++ AY G
Sbjct: 235 RNVESWNF-------MISGYAAAGLVKEAKEVFDSMP----VRDVVSWNAMVTAYAHVGC 283
Query: 66 YNNAEAIFRRMQTLGPE-PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQK 124
YN +F +M E P T +L + E V + ++ ++ +
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYI---DKHGIEIEGF 340
Query: 125 MFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQM 181
+ ++ MY K G +KA ++F ++R++ T+NS++S + + K+ +I+ +M
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVS----TWNSIISDLSVHGLGKDALEIFSEM 396
Query: 182 QRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
G +P+ +++ +++A ++A +FE M
Sbjct: 397 VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM 431
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ A F E +I K G +V L+ YGR G + A + RM
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM---- 201
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P A+++ +L ++E EA +F+ + +ER + + ++ MI Y AG +
Sbjct: 202 PVRDAVSWNSLLSAYLEKGLVDEARALFDEM--EER-----NVESWNFMISGYAAAGLVK 254
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQM-QRSGLQPDVVSYALL 196
+A+++F M R++ V++N++++ + Y EV +++++M S +PD + +
Sbjct: 255 EAKEVFDSMPVRDV----VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSV 310
Query: 197 INA 199
++A
Sbjct: 311 LSA 313
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSAL-- 86
GN +A+ L + K+G+ P V+++ + A R G+ A + + E S L
Sbjct: 799 GNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEA---LSELASFEGERSLLDQ 854
Query: 87 -TYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
TY I+ ++ ++A + + S + KP ++ +I + K EK +
Sbjct: 855 YTYGSIVHGLLQRGDLQKA---LDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLET 911
Query: 146 FSLMTQREIPHSTVTYNSLMSFETNYKEVSKI------YDQMQRSGLQPDVVSYALLINA 199
M S VTY +++ Y + K+ + M+ G PD +Y+ IN
Sbjct: 912 CQKMEGESCEPSVVTYTAMI---CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 200 YGKARREEEALAVFEEMLDAGV 221
+A + E+AL + EMLD G+
Sbjct: 969 LCQACKSEDALKLLSEMLDKGI 990
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 98/239 (41%), Gaps = 42/239 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI+ +GK + + M K G+ + ++ ++ + GR + A ++ M G
Sbjct: 230 LISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKG 289
Query: 81 PEPSALTYQIIL-----------------------------------KTFVEGNKFKEAE 105
TY+++L K+F K KEA
Sbjct: 290 ITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEAL 349
Query: 106 EVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM 165
E+ L + E + D K F +++ +A A ++ +M +R++ S V Y ++
Sbjct: 350 ELIRELKNKE---MCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIII 405
Query: 166 SFETNYKEVSKIYDQ---MQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
S +VSK +Q +++SG P V +Y ++ K ++ E+ +F EM++ G+
Sbjct: 406 SGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
Q + A K + + G + +++ L++ + I R + G P
Sbjct: 39 QRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFL 98
Query: 88 YQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFH--MMIYMYRKAGNYEKARKM 145
+++ +V+ N +A ++F+ + P + + MI Y K ++KA ++
Sbjct: 99 VNVLINMYVKFNLLNDAHQLFDQM---------PQRNVISWTTMISAYSKCKIHQKALEL 149
Query: 146 FSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARR 205
LM + + + TY+S++ +V ++ + + GL+ DV + LI+ + K
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 206 EEEALAVFEEML 217
E+AL+VF+EM+
Sbjct: 210 PEDALSVFDEMV 221
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A F E +I + K+GY +V + +L+ +Y G + A +F R+
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI---- 176
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PEP +++ ++K +V+ K A +F R + + + MI Y +A +
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLF-------RKMAEKNAISWTTMISGYVQADMNK 229
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A ++F M ++ V+ + +S + + I+ + ++ ++ D V +LI
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289
Query: 198 NAYGKARREEEALAVFEEM 216
+ Y K EEAL VF+ +
Sbjct: 290 DMYAKCGEMEEALEVFKNI 308
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 102/228 (44%), Gaps = 41/228 (17%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++ GNF A + + + P+ VS ++++ Y + G+ + A +FR+M
Sbjct: 156 LINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIALTLFRKM---- 207
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAP---------------------- 118
E +A+++ ++ +V+ + KEA ++F + + + P
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 119 ----------LKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
++ D + ++I MY K G E+A ++F + ++ + T + ++
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY-AYH 326
Query: 169 TNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
+ +E + +MQ+ G++P+V+++ ++ A EE +F M
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
>AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1258581-1260265 FORWARD
Length = 532
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 7/187 (3%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
++AE + M + G+ + + + ++ Y G++ + + ++ + P +TY +
Sbjct: 179 DKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLW 237
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
L F GN + AE+V+ L + L PD + ++ +Y K N EKAR M +
Sbjct: 238 LTAFASGNDVEGAEKVY---LKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEK 294
Query: 152 REIPHSTVTYNSLMSFETNYKE---VSKIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
+ V Y SL+S N + V+ + +++ S + + Y +I+A K E+
Sbjct: 295 LVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQ 354
Query: 209 ALAVFEE 215
A +++E
Sbjct: 355 AKGLYDE 361
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 67 NNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMF 126
N+AE F M +A T +L ++V+ +AE +FE + E LK
Sbjct: 146 NSAEKFFEDMPDQMRGHAACTS--LLHSYVQNKLSDKAEALFEKM--GECGFLKSCLPYN 201
Query: 127 HMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNS-LMSFET--NYKEVSKIYDQMQR 183
HM+ MY G +EK + + R P VTYN L +F + + + K+Y + +
Sbjct: 202 HML-SMYISRGQFEKVPVLIKELKIRTSP-DIVTYNLWLTAFASGNDVEGAEKVYLKAKE 259
Query: 184 SGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
L PD V+Y++L N Y K E+A +EM
Sbjct: 260 EKLNPDWVTYSVLTNLYAKTDNVEKARLALKEM 292
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L++ + + G +A+ + M +VS TA++ Y G Y A FR MQ G
Sbjct: 181 LLSGYARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP ++ +L + + + + + L ++ R LK + + +I MY K G
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIH--LYAERRGFLK-QTGVCNALIEMYSKCGVIS 293
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A ++F M +++ +++++++S + N + +++MQR+ ++P+ +++ L+
Sbjct: 294 QAIQLFGQMEGKDV----ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLL 349
Query: 198 NAYGKARREEEALAVFEEM 216
+A +E L F+ M
Sbjct: 350 SACSHVGMWQEGLRYFDMM 368
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 18/139 (12%)
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
PEP +Y I+L +V F++A+ F +R P K D ++ MI Y + G E
Sbjct: 34 PEPDTFSYNIMLSCYVRNVNFEKAQSFF------DRMPFK-DAASWNTMITGYARRGEME 86
Query: 141 KARKMF-SLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQP--DVVSYALLI 197
KAR++F S+M + E V++N+++S Y E + + P VV++ +I
Sbjct: 87 KARELFYSMMEKNE-----VSWNAMIS---GYIECGDLEKASHFFKVAPVRGVVAWTAMI 138
Query: 198 NAYGKARREEEALAVFEEM 216
Y KA++ E A A+F++M
Sbjct: 139 TGYMKAKKVELAEAMFKDM 157
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+ + + G+ +A ++ K+ VV+ TA++ Y + + AEA+F+ M
Sbjct: 106 MISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTV-- 159
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ +T+ ++ +VE ++ ++ ++F +L + ++P+ + + +
Sbjct: 160 -NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE---GIRPNSSGLSSALLGCSELSALQ 215
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
R++ ++++ + + SL+S E+ K+++ M++ DVV++ +I
Sbjct: 216 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMI 271
Query: 198 NAYGKARREEEALAVFEEMLD 218
+ Y + ++AL +F EM+D
Sbjct: 272 SGYAQHGNADKALCLFREMID 292
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT-L 79
L+ + + + ++A K+ M+ +VVS +++E+Y + G+ A +F RM
Sbjct: 168 LVAMYSRCRSLSDARKVFDEMSVW----DVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 80 GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMF--HMMIYMYRKAG 137
G P +T +L +++ ++ E Q MF + ++ MY K G
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI-----QNMFVGNCLVDMYAKCG 278
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYA 194
++A +FS M+ +++ V++N++++ + +++ +++++MQ ++ DVV+++
Sbjct: 279 MMDEANTVFSNMSVKDV----VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
I+ Y + EAL V +ML +G+
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGI 361
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 43 KMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFK 102
+ G+ ++ T +++ Y + G+ A F M P S +++ ++ ++ +
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEM----PHRSEVSWTALISGYIRCGELD 161
Query: 103 EAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYN 162
A ++F+ + P D +++ M+ + K+G+ AR++F MT + + +T+
Sbjct: 162 LASKLFDQM------PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWT 211
Query: 163 SLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
+++ N K++ K++D M L VS+ +I Y + ++ +E + +F+EM
Sbjct: 212 TMIHGYCNIKDIDAARKLFDAMPERNL----VSWNTMIGGYCQNKQPQEGIRLFQEM 264
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + G+ + A K+ T + + +VVS +++ + + G + A +F++M++
Sbjct: 172 LIHCYFSCGDLDSACKVFTTIKE----KDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ S +T +L + + +V + E + + + + M+ MY K G+ E
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYI---EENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A+++F M +++ VT+ +++ + +Y+ ++ + M Q D+V++ LI
Sbjct: 285 DAKRLFDAMEEKD----NVTWTTMLDGYAISEDYEAAREVLNSMP----QKDIVAWNALI 336
Query: 198 NAYGKARREEEALAVFEEM 216
+AY + + EAL VF E+
Sbjct: 337 SAYEQNGKPNEALIVFHEL 355
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE
Length = 838
Score = 57.8 bits (138), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 38 LTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVE 97
L +M ++G P+V+ +T L++ Y G + A+ +FR M G P+ TY +++
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 98 GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQR 152
+F+EA + + + E P+ ++ ++ RKAG +ARK+ M ++
Sbjct: 772 AGEFREACWLLKEM---ESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P++V+ ++L+ Y R G + A +F ++ G +P + I+L + E + +EV
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM-- 165
++ R L+ D K+ +I MY K G + A +F+ + ++ I V++NSL+
Sbjct: 331 HSYVI---RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNI----VSFNSLILG 383
Query: 166 ----SF-ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
F T +++ ++I + GL PD ++++ L+ + + +FE M
Sbjct: 384 LGLHGFASTAFEKFTEILEM----GLIPDEITFSALLCTCCHSGLLNKGQEIFERM 435
>AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4445461-4447290 FORWARD
Length = 609
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ KQ F EA K+ + K V++ + AY R +YN AE +F M G
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+ + Y I+ + + + +A + + ++ KP+ +++ +I M+ +A +
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM---KQRGCKPNIWIYNSLIDMHGRAMDLR 475
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
+A K++ M + ++ V+Y S++S KE+ + +Y + + + + D +++
Sbjct: 476 RAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMV 535
Query: 198 NAYGKARREEEALAVFEEM 216
+ K R +E + + ++M
Sbjct: 536 GVFSKTSRIDELMRLLQDM 554
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
I A+ + +N+AE + M K G+ VV+++ +M+ YG+ R ++A + +M+ G
Sbjct: 395 INAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGC 454
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
+P+ Y ++ + AE++++ + +RA + PD+ + MI Y ++ E+
Sbjct: 455 KPNIWIYNSLIDMHGRAMDLRRAEKIWKEM---KRAKVLPDKVSYTSMISAYNRSKELER 511
Query: 142 ARKMFS--LMTQREIPHSTV-TYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
+++ M + +I + + S + E+ ++ M+ G + D Y+ +N
Sbjct: 512 CVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALN 571
Query: 199 AYGKA 203
A A
Sbjct: 572 ALRDA 576
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 53 HTALMEAYGRGGRYNNAEAIFRRMQTLG-PEPSALTYQIILKTFVEGNKFKEAEEVFEPL 111
+T + + + GR A + M+ G PE S L Y ++++ F E + E++F+
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSEL-YSMLIRAFAEAREVVITEKLFKEA 309
Query: 112 LSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM---SFE 168
+ L D +M ++ MY + GN E ++ + M + E+ + +++ S +
Sbjct: 310 GGKK---LLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQ 366
Query: 169 TNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 220
+ E K+Y+ + + V+YA+ INAY + + +A +F+EM+ G
Sbjct: 367 RGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM--QT 78
+ ++ K G EA ++L M G + ++ L+ A+ E +F+ +
Sbjct: 254 VCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKK 313
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
L +P + +++L EGN E E + + +A LK + ++ + K
Sbjct: 314 LLKDPE-MCLKVVLMYVREGN----METTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 139 YEKARKMFSLMTQREIPHSTVTY----NSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYA 194
+ +A K++ + E VTY N+ E Y + ++D+M + G VV+Y+
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLE-KYNKAEMLFDEMVKKGFDKCVVAYS 427
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
+++ YGK RR +A+ + +M G
Sbjct: 428 NIMDMYGKTRRLSDAVRLMAKMKQRGC 454
>AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9158380-9159897 FORWARD
Length = 505
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P+ +++ +++ + G A ++ M G + + I++T ++ N+F EA +V
Sbjct: 213 PDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKV 272
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 167
F ++S L D + +MI K G + ARK+F M +R + +T+ SL+
Sbjct: 273 FYVMVSKRGGDL--DGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 168 ETNYKEVSKIYDQMQRSGLQ-PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
+ V + Y ++ G++ PD+ Y LI K +R EA VF +M+ G
Sbjct: 331 LLVKRRVVEAYGLVE--GVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGC 383
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
NVVS TA++ YG+ GR A IF MQ G +P T + + +E +
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFE 168
++ + L + + ++ +Y K G+ + + ++F+ M R+ V++ +++S
Sbjct: 395 GKAIT---SGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD----AVSWTAMVSAY 447
Query: 169 TNYK---EVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEM 216
+ E +++D+M + GL+PD V+ +I+A +A E+ F+ M
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 45/202 (22%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
NVVS +++ Y + GR + A +F M PE + +++ ++K V+ + EA +F
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREI-------------- 154
E R P + D + M+ K G ++AR++F M +R I
Sbjct: 195 E------RMP-RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNN 247
Query: 155 -------------PHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLIN 198
++N++++ +E++K ++D+M + +V+S+ +I
Sbjct: 248 RIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMIT 303
Query: 199 AYGKARREEEALAVFEEMLDAG 220
Y + + EEAL VF +ML G
Sbjct: 304 GYVENKENEEALNVFSKMLRDG 325
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 97/198 (48%), Gaps = 23/198 (11%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+IT + K G+ EA ++ +++ NVV+ TA++ Y R + + AE +F+ M
Sbjct: 83 VITGYIKLGDMREARELF---DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM---- 135
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKM--FHMMIYMYRKAGN 138
PE + +++ ++ + + + +A E+F+ + P++ + ++ M+ + G
Sbjct: 136 PERNVVSWNTMIDGYAQSGRIDKALELFDEM---------PERNIVSWNSMVKALVQRGR 186
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLIN 198
++A +F M +R++ T + L E +++D M + +++S+ +I
Sbjct: 187 IDEAMNLFERMPRRDVVSWTAMVDGLAK-NGKVDEARRLFDCMP----ERNIISWNAMIT 241
Query: 199 AYGKARREEEALAVFEEM 216
Y + R +EA +F+ M
Sbjct: 242 GYAQNNRIDEADQLFQVM 259
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K G A K+ + N + +++S +++ Y G A ++ +M+ G
Sbjct: 372 LLNMYSKSGELIAARKM--FDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG 429
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+PSA+TY +L ++ E F+ L+ DE PL+ + + ++ + +AG +
Sbjct: 430 FKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEH--YTCLVDLCGRAGRLK 487
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVVSYALLI 197
+ R S Y +++S + EVS ++ ++ +G D +Y L+
Sbjct: 488 DVTNFINCDDAR---LSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMS 543
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N Y + EEA + +M + G+
Sbjct: 544 NIYAANGKREEAAEMRMKMKEKGL 567
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ +GK G+ EA ++ M+K N VS +AL+ Y + G + A IFR M+
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSK----KNSVSWSALLGGYCQNGEHEKAIEIFREME--- 358
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E + +LK + +E+ + R + + +I +Y K+G +
Sbjct: 359 -EKDLYCFGTVLKACAGLAAVRLGKEIHGQYV---RRGCFGNVIVESALIDLYGKSGCID 414
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS-FETNYK--EVSKIYDQMQRSGLQPDVVSYALLI 197
A +++S M+ R + +T+N+++S N + E ++ M + G++PD +S+ ++
Sbjct: 415 SASRVYSKMSIRNM----ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470
Query: 198 NAYGKARREEEA 209
A G +E
Sbjct: 471 TACGHTGMVDEG 482
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +GK G + A ++ + M+ N+++ A++ A + GR A + F M G
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P +++ IL E F +L + +KP + + MI + +AG +E
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYF--VLMAKSYGIKPGTEHYSCMIDLLGRAGLFE 516
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRS--GLQPDV-VSYALLI 197
+A +L+ + E + + L+ + S++ +++ + L+P +SY LL
Sbjct: 517 EAE---NLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLS 573
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N Y R +AL + + M+ GV
Sbjct: 574 NMYKAIGRHGDALNIRKLMVRRGV 597
>AT2G30780.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13116547-13118059 FORWARD
Length = 452
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 47 APNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEE 106
AP VV++ L+ YGR N EA F +Q + P+++TY ++ ++ + + E
Sbjct: 171 APTVVTYNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLIAGYMTAWNWDKMEA 230
Query: 107 VFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLM 149
F+ + +R P++PD + +M+ Y +GN + +M+ ++
Sbjct: 231 TFQEM---KRGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVI 270
>AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16091120-16092454 FORWARD
Length = 444
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 8/207 (3%)
Query: 20 RLITAHGKQGNFNEAEKI--LTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQ 77
RL+++ K + + + I L + K ++P + +T +M GGR ++ +M+
Sbjct: 210 RLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMK 269
Query: 78 TLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
EP + Y I+L+ + + +A+++F+ LL A PD +++ I K
Sbjct: 270 CDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLA---PDVYTYNVYINGLCKQN 326
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYA 194
+ E A KM S M + + VTYN L+ ++S+ ++ +M+ +G+ + ++
Sbjct: 327 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFD 386
Query: 195 LLINAYGKARREEEALAVFEEMLDAGV 221
++I+AY + A + EE + V
Sbjct: 387 IMISAYIEVDEVVCAHGLLEEAFNMNV 413
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTY 88
G N A + M+ +VV+ ++E Y R G + A +F M+ P +
Sbjct: 160 GRINYARNVFDEMSHR----DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 89 QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSL 148
I+ + ++E L+ ++ ++ D + ++ MY AG + AR+ F
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIEND---VRMDTHLLTALVTMYAGAGCMDMAREFFRK 272
Query: 149 MTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
M+ R + ST + S + I+DQ ++ D+V + +I+AY ++ +E
Sbjct: 273 MSVRNLFVSTAMVSG-YSKCGRLDDAQVIFDQTEKK----DLVCWTTMISAYVESDYPQE 327
Query: 209 ALAVFEEMLDAGV 221
AL VFEEM +G+
Sbjct: 328 ALRVFEEMCCSGI 340
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 14 SEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF 73
S + S +IT + KQGN A + M + ++VS +++ Y + G N+A +F
Sbjct: 191 SLVSSTAMITCYAKQGNVEAARALFDSMCER----DIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 74 RRMQTLG-PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYM 132
+++ G P+P +T L + + + + S ++ + K+ +I M
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR---IRLNVKVCTGLIDM 303
Query: 133 YRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQR-SGLQP 188
Y K G+ E+A +F+ +++I V +N++++ ++ +++++MQ +GLQP
Sbjct: 304 YSKCGSLEEAVLVFNDTPRKDI----VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQP 359
Query: 189 DVVSYALLINAYGKARREEEALAVFEEM 216
+++ + A A E + +FE M
Sbjct: 360 TDITFIGTLQACAHAGLVNEGIRIFESM 387
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 19 IRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
LI + E +K+ ++ G+ P +V L+ Y + G +A +F M
Sbjct: 89 CNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM-- 146
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
P ++ +++ + E +EA ++F+ + + D + M+ Y K
Sbjct: 147 --PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT-------EKDSYSWTAMVTGYVKKDQ 197
Query: 139 YEKARKMFSLMTQREIPHS-----TVTYNSLMSFETNYKEVSK-IYDQMQRSGLQPDVVS 192
E+A ++SLM QR +P+S TV+ + K I+ + R+GL D V
Sbjct: 198 PEEALVLYSLM-QR-VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 193 YALLINAYGKARREEEALAVFEEMLDAGV 221
++ L++ YGK +EA +F+++++ V
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 41 MNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNK 100
M++ G N V++T L++ + G + A+ IF+ M + G P +TY I+L + K
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 101 FKEA------EEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREI 154
++A E+ ++ S +KP+ + MI + K G E+A +F M +
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 155 PHSTVTYNSLMSF---ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALA 211
+ TYN+L+ + + +++ +M+ D +Y L+ + R ++
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKG--- 183
Query: 212 VFEEML 217
F EML
Sbjct: 184 -FLEML 188
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 14/199 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K ++A ++ ++ PN V T L Y + G A +F RM+ G
Sbjct: 201 LVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
P L + ++ T++ K K+A +F + S PD +++MI + K G
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-------PDVVAWNVMISGHGKRGCET 309
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
A + F M + + + T S++S N ++ + + GL ++ + L+
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 198 NAYGKARREEEALAVFEEM 216
+ Y K + E A VFE +
Sbjct: 370 SMYSKCEKMEAAAKVFEAL 388
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
++V T +M + + G Y A ++ M+ G P T+ +L+ + +E +
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS-- 166
+ D+ + +I MY K G+ + + ++F M +R + V++NSL++
Sbjct: 756 SLIF---HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGY 809
Query: 167 FETNYKEVS-KIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+ Y E + KI+D M++S + PD +++ ++ A A + + +FE M+
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI 861
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Query: 13 FSEMDSIRL-ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
FSE+ S L I+ K G E+ L M K G AP+V + AL+EA + A+
Sbjct: 394 FSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKK 453
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
++ M G + + TY ++++ E + +E+ +F+ +L ER ++PD+ ++ +I
Sbjct: 454 LWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKML--ERG-IEPDETIYMSLIE 510
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN 170
K E A ++F +R+ H TVT L F N
Sbjct: 511 GLCKETKIEAAMEVFRKCMERD--HKTVTRRVLSEFVLN 547
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Query: 32 NEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQII 91
+ A + L YM G P + + + L + R + ++ + + + G +Y ++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
+ + + +E+ + + ++ L PD +++ +I KA A+K++ M
Sbjct: 404 ISFLCKAGRVRESYTALQEM---KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFV 460
Query: 152 REIPHSTVTYNSL---MSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEE 208
+ TYN L +S E +E +++D+M G++PD Y LI K + E
Sbjct: 461 EGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEA 520
Query: 209 ALAVFEEMLD 218
A+ VF + ++
Sbjct: 521 AMEVFRKCME 530
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 16/212 (7%)
Query: 12 DFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
DFS L++ + K G F+EA I M A ++VS AL+ Y G A+
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMP----AKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
IF+ M+ E + L++ I++ E +E ++F + +R +P F I
Sbjct: 373 IFKEMK----EKNILSWMIMISGLAENGFGEEGLKLFSCM---KREGFEPCDYAFSGAIK 425
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQP--D 189
G Y ++ + + + S N+L+ T Y + + + Q P D
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI---TMYAKCGVVEEARQVFRTMPCLD 482
Query: 190 VVSYALLINAYGKARREEEALAVFEEMLDAGV 221
VS+ LI A G+ EA+ V+EEML G+
Sbjct: 483 SVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 18/199 (9%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++T + K G F+ E++L M+ +V++ A++ Y G Y A + RRM + G
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDD---NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG 281
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E TY +++ + ++V +L E D ++ +Y K G ++
Sbjct: 282 IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS----LVSLYYKCGKFD 337
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQMQRSGLQPDVVSYALLI 197
+AR +F M +++ V++N+L+S + E I+ +M+ + +++S+ ++I
Sbjct: 338 EARAIFEKMPAKDL----VSWNALLSGYVSSGHIGEAKLIFKEMK----EKNILSWMIMI 389
Query: 198 NAYGKARREEEALAVFEEM 216
+ + EE L +F M
Sbjct: 390 SGLAENGFGEEGLKLFSCM 408
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 22/188 (11%)
Query: 16 MDSIR---LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAI 72
+DS+ LI A G+ G+ EA + M K G P+ ++ ++ A G +
Sbjct: 481 LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKY 540
Query: 73 FRRMQTL-GPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
F M+T+ P A Y ++ KF +AE V E L P KP +++ ++
Sbjct: 541 FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL------PFKPTAEIWEALLS 594
Query: 132 MYRKAGNYE----KARKMFSLMTQREIPHSTVTY---NSLMSFETNYKEVSKIYDQMQRS 184
R GN E A K+F L IP TY +++ + ++EV+++ M+
Sbjct: 595 GCRVHGNMELGIIAADKLFGL-----IPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR 649
Query: 185 GLQPDVVS 192
G++ +V
Sbjct: 650 GVKKEVAC 657
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 55 ALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSD 114
A++ Y + G +A ++FR MQ P+ +T IL + + V + + S
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 115 ERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNY 171
+ + + +I MY K G+ +AR++F LMT++ + VT+N+++S
Sbjct: 450 D---FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK----NEVTWNTMISGYGLHGQG 502
Query: 172 KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+E I+ +M SG+ P V++ ++ A A +E +F M+
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 11/200 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
+I+ + + G +A + M K ++PN V+ T ++ A + G + + + +++
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E S ++ + + EA +F+ + K ++ ++ MI Y G +
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMT-------KKNEVTWNTMISGYGLHGQGQ 503
Query: 141 KARKMFSLMTQREIPHSTVTYNSLM---SFETNYKEVSKIYDQM-QRSGLQPDVVSYALL 196
+A +F M I + VT+ ++ S KE +I++ M R G +P V YA +
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 197 INAYGKARREEEALAVFEEM 216
++ G+A + AL E M
Sbjct: 564 VDILGRAGHLQRALQFIEAM 583
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + + G ++A M GY P+ V+ ++++ A + GR + + + G
Sbjct: 164 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 223
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
E + ++ + + + A VFE + A MI G +
Sbjct: 224 IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS-------MISCLAIHGKGK 276
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYALLI 197
+A +MFS M ++ +T+ ++++ + E KI+ +M+ ++P+V + LI
Sbjct: 277 EALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLI 336
Query: 198 NAYGKARREEEALAVFEEM 216
+ G++ + +EA + +EM
Sbjct: 337 HLLGRSGKLKEAYRLVKEM 355
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI +GK G+ A ++ + NV++ A++ +Y + A A+F RM +
Sbjct: 425 LIDLYGKMGDLTVAWRMFCEADT-----NVITWNAMIASYVHCEQSEKAIALFDRMVSEN 479
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+PS++T +L V + + + + E + + + +I MY K G+ E
Sbjct: 480 FKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH---EMNLSLSAALIDMYAKCGHLE 536
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
K+R++F Q++ V +N ++S + +V ++DQM+ S ++P ++ L+
Sbjct: 537 KSRELFDAGNQKD----AVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 592
Query: 198 NAYGKARREEEALAVFEEM 216
+A A E+ +F +M
Sbjct: 593 SACTHAGLVEQGKKLFLKM 611
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 7 TQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRY 66
T+H + S S LI + K G+ ++ ++ N+ + V ++ YG G
Sbjct: 513 TEHEMNLSL--SAALIDMYAKCGHLEKSRELFDAGNQ----KDAVCWNVMISGYGMHGDV 566
Query: 67 NNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMF 126
+A A+F +M+ +P+ T+ +L ++ +++F L + +KP+ K +
Sbjct: 567 ESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF---LKMHQYDVKPNLKHY 623
Query: 127 HMMIYMYRKAGNYEKARKMFSLMTQREIPHST--VTYNSLMSFETNYKEVS---KIYDQM 181
++ + ++GN E+A T +P S V + +L+S + E ++ ++
Sbjct: 624 SCLVDLLSRSGNLEEAES-----TVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERA 678
Query: 182 QRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
S Q D Y +L N Y A + EEA E M ++GV
Sbjct: 679 VASDPQNDGY-YIMLANMYSAAGKWEEAERAREMMRESGV 717
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 29 GNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA---IFRRMQTLGPEPSA 85
G+FN + +++ + PN S ++ G +N+ EA ++RRM+ G +P
Sbjct: 75 GDFNYS----SFLFSVTEEPNHYSFNYMIR--GLTNTWNDHEAALSLYRRMKFSGLKPDK 128
Query: 86 LTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
TY + + + V L + L+ D + H +I MY K G ARK+
Sbjct: 129 FTYNFVFIACAKLEEIGVGRSVHSSLF---KVGLERDVHINHSLIMMYAKCGQVGYARKL 185
Query: 146 FSLMTQREIPHSTVTYNSLMS--FETNY-KEVSKIYDQMQRSGLQPD 189
F +T+R+ TV++NS++S E Y K+ ++ +M+ G +PD
Sbjct: 186 FDEITERD----TVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 228
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + K G A K+ + + + VS +++ Y G +A +FR+M+ G
Sbjct: 169 LIMMYAKCGQVGYARKLFDEITE----RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG 224
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP T +L + + E ++ + + + +I MY K G+ +
Sbjct: 225 FEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK---IGLSTFLGSKLISMYGKCGDLD 281
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMS-FETNYK--EVSKIYDQMQRSGLQPDVVSYALLI 197
AR++F+ M +++ V + ++++ + N K E K++ +M+++G+ PD + + ++
Sbjct: 282 SARRVFNQMIKKD----RVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVL 337
Query: 198 NA-----------------------------------YGKARREEEALAVFEEM 216
+A YGK R EEAL VFE M
Sbjct: 338 SACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 391
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 12 DFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
D S +S L++ + K GN N+A KI + +++ PN+VS+ ++ Y G A
Sbjct: 472 DLSVQNS--LVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALK 525
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+F +++ G EP+ +T+ +L V + F+ + S PD + M+
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH--YACMVD 583
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMS 166
+ ++G + A + S M + PHS V + SL+S
Sbjct: 584 LLGRSGLLDDASNLISTMPCK--PHSGV-WGSLLS 615
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
++ + K G +A + M + NV++ TA+++ Y + G + + +F RM+ G
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
Query: 81 P-EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+ ++ T ++ K + +++E ++ L+S R PL+ D + + ++ MY K G
Sbjct: 270 DVKVNSNTLAVMFKACRDFVRYREGSQI-HGLVS--RMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
+A+ +F +M ++ +V++NSL++ K++S+ Y+ ++ + D+VS+ +I
Sbjct: 327 GEAKAVFGVMKNKD----SVSWNSLITGLVQRKQISEAYELFEKMPGK-DMVSWTDMIKG 381
Query: 200 YGKARREEEALAVFEEM 216
+ + + +F M
Sbjct: 382 FSGKGEISKCVELFGMM 398
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 51 VSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEP 110
++ TA++ A+ G Y A F +M P++ T+ +L E ++
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 111 LLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM---SF 167
++ + + D + + ++ MY K GN A K+FS +++ I V+YN+++ S+
Sbjct: 464 VV---KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI----VSYNTMISGYSY 516
Query: 168 ETNYKEVSKIYDQMQRSGLQPDVVSYALLINA 199
K+ K++ ++ SG +P+ V++ L++A
Sbjct: 517 NGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI++ K G + ++ M+ G N+ + AL++ R G+ A + +++
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P + + ++ + A +V + + E P+ PD ++ AG E
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKA-ETHPIDPDHISIGALMKACCNAGQVE 626
Query: 141 KARKMFSLMTQ---REIPHS-TVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALL 196
+A++++ ++ + R P T+ NS S ++ IY M+ + PD V ++ L
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSC-SKSGDWDFACSIYKDMKEKDVTPDEVFFSAL 685
Query: 197 INAYGKARREEEALAVFEEMLDAGV 221
I+ G A+ +EA + ++ G+
Sbjct: 686 IDVAGHAKMLDEAFGILQDAKSQGI 710
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYA--PNVVSHTALMEAYGRGGRYNNAEAIFRRMQT 78
LI+A G+ G + A +L M + P+ +S ALM+A G+ A+ +++ +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK 637
Query: 79 LGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGN 138
G + Y I + + + + A +++ + + + PD+ F +I + A
Sbjct: 638 YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM---KEKDVTPDEVFFSALIDVAGHAKM 694
Query: 139 YEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQMQRSGLQPDVVSYAL 195
++A + + I T++Y+SLM N +K+ ++Y++++ L+P + +
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNA 754
Query: 196 LINAYGKARREEEALAVFEEMLDAGV 221
LI A + + +A+ +E+ G+
Sbjct: 755 LITALCEGNQLPKAMEYLDEIKTLGL 780
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K NF + K+ M + NVV+ T L+ Y R + +F RMQ G
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKE----RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 81 PEPSALTYQIILKTFVE---GNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAG 137
+P++ T+ L E G + + V D+ P+ + +I +Y K G
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS------NSLINLYLKCG 243
Query: 138 NYEKARKMFSLMTQREIPHSTVTYNSLMS 166
N KAR +F + E+ S VT+NS++S
Sbjct: 244 NVRKARILFD---KTEVK-SVVTWNSMIS 268
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ A+ K G EA K+ + ++ ++V+ +A++ Y + G A +F + G
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDD----KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ T+ IL N + F R L + ++ MY K GN E
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR--LDSSLCVSSALLTMYAKKGNIE 547
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVVSYALLI 197
A ++F +R+ V++NS++S + + K ++ +M++ ++ D V++ +
Sbjct: 548 SAEEVF----KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 603
Query: 198 NAYGKARREEEALAVFEEML 217
A A EE F+ M+
Sbjct: 604 AACTHAGLVEEGEKYFDIMV 623
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 12 DFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
D S S L+T + K+GN AE++ K ++VS +++ Y + G+ A
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVF----KRQREKDLVSWNSMISGYAQHGQAMKALD 582
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
+F+ M+ + +T+ + +E E+ F+ ++ D + P ++ M+
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD--CKIAPTKEHNSCMVD 640
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYK--EVSKIYDQMQRSGLQPD 189
+Y +AG EKA K+ M P + + ++++ +K E+ ++ + + D
Sbjct: 641 LYSRAGQLEKAMKVIENMPN---PAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 697
Query: 190 VVSYALLINAYGKA 203
+Y LL N Y ++
Sbjct: 698 SAAYVLLSNMYAES 711
>AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 17 DSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM 76
+++ ++ K G EA K+ M G P VV +TA++EA+ + + +A+ IFR+M
Sbjct: 133 NAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKM 192
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
Q G P+A +Y ++++ N +A +L +P P F ++ +
Sbjct: 193 QNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP---TFVELVDALCRV 249
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQ 180
E+A+ + Q+ F N K V + D+
Sbjct: 250 KGVEQAQSAIDTLNQK-------------GFAVNVKAVKEFMDK 280
>AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 17 DSIRLITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRM 76
+++ ++ K G EA K+ M G P VV +TA++EA+ + + +A+ IFR+M
Sbjct: 133 NAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKM 192
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
Q G P+A +Y ++++ N +A +L +P P F ++ +
Sbjct: 193 QNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP---TFVELVDALCRV 249
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQ 180
E+A+ + Q+ F N K V + D+
Sbjct: 250 KGVEQAQSAIDTLNQK-------------GFAVNVKAVKEFMDK 280
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
+ VS +++ AY + Y A +F RM G +P T +L + ++
Sbjct: 373 HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH 432
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMT-QREIPHSTVTYNSLM-- 165
+ ++ + PD + + +I MY + G ++R++F M +RE+ +T+N+++
Sbjct: 433 QIVVK----TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREV----ITWNAMIGG 484
Query: 166 -SFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
+F N E ++ M+ +G+ P +++ ++NA A +EA A F M+
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMM 537
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 92/193 (47%), Gaps = 29/193 (15%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMG-----------YAPNVVSHTALMEAYGRGGRYNNA 69
LI +G++G A + + + + NVVS ++++AY + G +A
Sbjct: 241 LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSA 300
Query: 70 EAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMM 129
+F +M+ + +++ ++ +V ++ ++A +F + P + D ++MM
Sbjct: 301 RLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEM------PNR-DAHSWNMM 349
Query: 130 IYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM-SFETN--YKEVSKIYDQMQRSGL 186
+ Y GN E AR F ++ TV++NS++ ++E N YKE ++ +M G
Sbjct: 350 VSGYASVGNVELARHYFEKTPEKH----TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE 405
Query: 187 QPDVVSYALLINA 199
+PD + L++A
Sbjct: 406 KPDPHTLTSLLSA 418
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 92 LKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQ 151
L + EA ++FE L + ++ MI Y K +ARK+F +M +
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVT-------WNTMISGYVKRREMNQARKLFDVMPK 99
Query: 152 REIPHSTVTYNSLMSFETNY------KEVSKIYDQMQRSGLQPDVVSYALLINAYGKARR 205
R++ VT+N+++S + +E K++D+M D S+ +I+ Y K RR
Sbjct: 100 RDV----VTWNTMISGYVSCGGIRFLEEARKLFDEMP----SRDSFSWNTMISGYAKNRR 151
Query: 206 EEEALAVFEEM 216
EAL +FE+M
Sbjct: 152 IGEALLLFEKM 162
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 22 ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGP 81
I+ + K GN A ++ + P+V +++A++ + + G N A IF M+T G
Sbjct: 501 ISMYAKSGNMPLANQVFIEVQN----PDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Query: 82 EPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEK 141
+P+ + +L G + + F+ + +D R + P++K F ++ + + G
Sbjct: 557 KPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYR--INPNEKHFTCLVDLLGRTGRLSD 614
Query: 142 ARKMFSLMTQREIPHSTVTYNSLMSFETNYKEV---SKIYDQMQRSGLQPDVV-SYALLI 197
A + ++ P VT+ +L+S YK+ ++ +++ L+P+ SY LL
Sbjct: 615 AENLILSSGFQDHP---VTWRALLSSCRVYKDSVIGKRVAERLME--LEPEASGSYVLLH 669
Query: 198 NAYGKARREEEALAVFEEMLDAGV 221
N Y + A V E M D GV
Sbjct: 670 NIYNDSGVNSSAEEVRELMRDRGV 693
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 28 QGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALT 87
+G + I Y K+G ++V TAL++ Y + G A +F M P + +T
Sbjct: 265 EGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM----PSKNVVT 320
Query: 88 YQIILKTFVEGNKFKE--AEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKM 145
Y ++ F++ ++ + + E F+ + +R L+P F +++ A E R++
Sbjct: 321 YNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Query: 146 FSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQ--RSGLQPDVVSYALLINAYGKA 203
+L+ + ++L+ Y + D MQ S + D+ S+ +I+ + +
Sbjct: 381 HALICKNNFQSDEFIGSALIEL---YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQN 437
Query: 204 RREEEALAVFEEMLDAGV 221
+ E A +F ++ + +
Sbjct: 438 EQLESAFDLFRQLFSSHI 455
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 49 NVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVF 108
NVV T L+ + + R A +FR+M P+ T IL + + + V
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 109 EPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLM-SF 167
++ R ++ D F I MY + GN + AR +F +M +R + ++++S++ +F
Sbjct: 336 GYMI---RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV----ISWSSMINAF 388
Query: 168 ETN--YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML-DAGV 221
N ++E + +M+ + P+ V++ L++A + +E FE M D GV
Sbjct: 389 GINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 15 EMDSIRL---ITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEA 71
EMD++ I + + GN A + M + NV+S ++++ A+G G + A
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPE----RNVISWSSMINAFGINGLFEEALD 399
Query: 72 IFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIY 131
F +M++ P+++T+ +L KE + FE + D + P+++ + M+
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDY--GVVPEEEHYACMVD 457
Query: 132 MYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQR-SGLQPDV 190
+ +AG +A+ M + + + + +L+S +KEV + ++ ++P+
Sbjct: 458 LLGRAGEIGEAKSFIDNMPVKPMASA---WGALLSACRIHKEVDLAGEIAEKLLSMEPEK 514
Query: 191 VS-YALLINAYGKA 203
S Y LL N Y A
Sbjct: 515 SSVYVLLSNIYADA 528
>AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8034036-8035292 REVERSE
Length = 418
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIF----RRM 76
LI ++G+ F+ A K+ M+K+G VVS AL+ A + +F +R
Sbjct: 108 LIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRY 167
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
+ P+ ++Y +++K++ + K ++A E+ + E ++ F ++ K
Sbjct: 168 NNITPD--KISYGMLIKSYCDSGKPEKAMEIMRDM---EVKGVEVTIIAFTTILGSLYKN 222
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYN-SLMSFETNYKE-VSKIYDQMQRSGLQPDVVSYA 194
G ++A ++ M + YN LM+ E V ++ ++M GL+PD VSY
Sbjct: 223 GLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYN 282
Query: 195 LLINAYGKARREEEALAVFE 214
L+ AY EA V+E
Sbjct: 283 YLMTAYCVKGMMSEAKKVYE 302
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 67 NNAEAIFRRMQTLGPEPSALTY--QIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQK 124
+ A AI++ + P + Y ++ ++ + +F + E + E S + P +
Sbjct: 47 DKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIE---SHKNNPKIKTET 103
Query: 125 MFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSFETN---YKEVSKIYDQM 181
+I Y +A ++ A KMF M + P + V++N+L++ + ++ V +++D+
Sbjct: 104 FLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEF 163
Query: 182 -QR-SGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 221
QR + + PD +SY +LI +Y + + E+A+ + +M GV
Sbjct: 164 PQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGV 205
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI ++G+ FN A + M++ G + VS AL+ A ++ +F +
Sbjct: 108 LIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI---- 163
Query: 81 PE------PSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYR 134
P+ P ++Y I++K++ + ++A E+ + + ++ F ++
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQM---QGKGMEVTTIAFTTILSSLY 220
Query: 135 KAGNYEKARKMFSLMTQREIPHSTVTYN-SLMSFETNYKE-VSKIYDQMQRSGLQPDVVS 192
K G E A +++ M ++ YN +MS + E V ++ ++M GL+PD +S
Sbjct: 221 KKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTIS 280
Query: 193 YALLINAYGKARREEEALAVFE 214
Y L+ AY + +EA V+E
Sbjct: 281 YNYLMTAYCERGMLDEAKKVYE 302
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 77 QTLGPEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKA 136
+ P S ++ ++ + +F + E + E +D + +P + +I Y +A
Sbjct: 59 HSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEP---FYSTLIRSYGQA 115
Query: 137 GNYEKARKMFSLMTQREIPHSTVTYNSLMS---FETNYKEVSKIYDQM-QR-SGLQPDVV 191
+ A + F M Q P S V++N+L++ N+ +V +++D++ QR + + PD +
Sbjct: 116 SMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKI 175
Query: 192 SYALLINAYGKARREEEALAVFEEMLDAGV 221
SY +LI +Y + E+A+ + +M G+
Sbjct: 176 SYGILIKSYCDSGTPEKAIEIMRQMQGKGM 205
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
P+ +S+ L+++Y G A I R+MQ G E + + + IL + + + + A+ +
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 167
+ ++ + + D +++ I M + + E+ +++ M+ + T++YN LM+
Sbjct: 232 WNEMV---KKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTA 287
Query: 168 ETN---YKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEE 215
E K+Y+ ++ + P+ ++ LI +R E+ A+F++
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKK 338
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 8/196 (4%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
LI + G N A+++ M + NVVS T L+ + + G Y A + + M G
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPE----KNVVSWTTLINGFSQTGDYETAISTYFEMLEKG 288
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
+P+ T +L + + +L + +K D+ + ++ MY K G +
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN---GIKLDRAIGTALVDMYAKCGELD 345
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
A +FS M ++I T + + + + + QM SG +PD V + ++ A
Sbjct: 346 CAATVFSNMNHKDILSWTAMIQG-WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 201 GKARREEEALAVFEEM 216
+ + L F+ M
Sbjct: 405 LNSSEVDLGLNFFDSM 420
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 48 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 107
PNVVS T L+ Y + + A ++FR M PE S +T+ ++ F + + +EA
Sbjct: 36 PNVVSITNLISGYLKKHEFEEALSLFRAM----PERSVVTWNAVIGGFSQTGRNEEAVNT 91
Query: 108 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTV-TYNSLMS 166
F +L + + P++ F I ++ + + + + V +NSL+S
Sbjct: 92 FVDMLRE--GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLIS 149
Query: 167 FET---NYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEML 217
F + N ++ +++++ Q ++VS+ +I Y R EEA+A+FE+M+
Sbjct: 150 FYSKCGNMEDSLLAFNKLEEE--QRNIVSWNSMIWGYAHNGRGEEAVAMFEKMV 201
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 11/193 (5%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L+ + K GN N+A+++ M NVVS +L+ + + G A +F+ M
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGD----RNVVSWNSLITCFEQNGPAVEALDVFQMMLESR 248
Query: 81 PEPSALTYQIILKTFVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYE 140
EP +T ++ + K +EV ++ +++ L+ D + + + MY K +
Sbjct: 249 VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK--LRNDIILSNAFVDMYAKCSRIK 306
Query: 141 KARKMFSLMTQREIPHSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQPDVVSYALLINAY 200
+AR +F M R + T + S + + K ++ +M + +VVS+ LI Y
Sbjct: 307 EARFIFDSMPIRNVIAET-SMISGYAMAASTKAARLMFTKMA----ERNVVSWNALIAGY 361
Query: 201 GKARREEEALAVF 213
+ EEAL++F
Sbjct: 362 TQNGENEEALSLF 374
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 99/199 (49%), Gaps = 22/199 (11%)
Query: 21 LITAHGKQGNFNEAEKILTYMNKMGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLG 80
L++ +GK G +E+ ++L M + +VV+ AL+ Y + A A F+ M+ G
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRR----DVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 458
Query: 81 PEPSALTYQIILKT-FVEGNKFKEAEEVFEPLLSDERAPLKPDQKMFHMMIYMYRKAGNY 139
+ +T +L + G+ + + + ++S A + D+ + + +I MY K G+
Sbjct: 459 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS---AGFESDEHVKNSLITMYAKCGDL 515
Query: 140 EKARKMFSLMTQREIPHSTVTYNSLMSFETNY---KEVSKIYDQMQRSGLQPDVVSYALL 196
++ +F+ + R I +T+N++++ ++ +EV K+ +M+ G+ D S++
Sbjct: 516 SSSQDLFNGLDNRNI----ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 571
Query: 197 INAYGKARREEEALAVFEE 215
++A K LAV EE
Sbjct: 572 LSAAAK-------LAVLEE 583