Jatropha Genome Database
- JcCB0104911.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0104911.10 + phase: 0 /pseudo/partial
(421 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G03360.1 | Symbols: | F-box family protein | chr3:795218-796... 69 6e-12
AT5G02700.1 | Symbols: | F-box family protein | chr5:609381-611... 67 2e-11
AT3G28410.1 | Symbols: | F-box family protein | chr3:10640152-1... 65 1e-10
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 61 1e-09
AT4G10400.2 | Symbols: | F-box family protein | chr4:6446335-64... 58 1e-08
AT4G10400.1 | Symbols: | F-box family protein | chr4:6446335-64... 58 1e-08
AT1G78750.1 | Symbols: | F-box family protein | chr1:29613122-2... 56 4e-08
AT1G49610.1 | Symbols: | F-box family protein | chr1:18361679-1... 56 5e-08
AT1G55660.1 | Symbols: | F-box family protein | chr1:20800694-2... 55 7e-08
AT5G03100.1 | Symbols: | F-box family protein | chr5:726832-727... 55 7e-08
AT4G09920.1 | Symbols: | F-box family protein | chr4:6224691-62... 55 1e-07
AT1G69630.1 | Symbols: | F-box family protein | chr1:26191640-2... 55 1e-07
AT3G42770.1 | Symbols: | F-box family protein | chr3:14867122-1... 54 1e-07
AT4G26340.1 | Symbols: | F-box family protein | chr4:13324130-1... 54 2e-07
AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-1... 53 3e-07
AT5G02930.1 | Symbols: | F-box family protein | chr5:682577-684... 53 4e-07
AT3G52680.2 | Symbols: | F-box family protein | chr3:19527075-1... 53 4e-07
AT3G52680.1 | Symbols: | F-box family protein | chr3:19527075-1... 53 4e-07
AT1G13570.1 | Symbols: | F-box family protein | chr1:4642528-46... 52 6e-07
AT5G25860.1 | Symbols: | F-box family protein | chr5:9016908-90... 52 6e-07
AT5G54820.1 | Symbols: | F-box family protein | chr5:22269859-2... 52 6e-07
AT5G02910.1 | Symbols: | F-box family protein | chr5:677120-678... 52 8e-07
AT1G80960.3 | Symbols: | F-box protein-related | chr1:30416065-... 52 9e-07
AT4G26350.1 | Symbols: | F-box family protein | chr4:13326853-1... 52 9e-07
AT5G56420.2 | Symbols: | F-box family protein | chr5:22850863-2... 51 1e-06
AT5G56420.1 | Symbols: | F-box family protein | chr5:22850863-2... 51 1e-06
AT4G13960.1 | Symbols: | F-box family protein | chr4:8060681-80... 51 1e-06
AT5G56690.1 | Symbols: | F-box family protein | chr5:22939723-2... 51 2e-06
AT1G80960.1 | Symbols: | F-box protein-related | chr1:30416065-... 51 2e-06
AT1G80960.2 | Symbols: | F-box protein-related | chr1:30416065-... 51 2e-06
AT5G22660.2 | Symbols: | F-box family protein | chr5:7536328-75... 50 2e-06
AT5G02920.1 | Symbols: | ubiquitin-protein ligase | chr5:680541... 50 2e-06
AT1G51370.2 | Symbols: | F-box family protein | chr1:19045615-1... 50 2e-06
AT3G03040.1 | Symbols: | F-box family protein | chr3:684685-686... 50 3e-06
AT3G58880.1 | Symbols: | F-box family protein | chr3:21768485-2... 50 3e-06
AT1G58310.1 | Symbols: | F-box family protein | chr1:21631947-2... 50 3e-06
AT4G15060.1 | Symbols: | F-box protein-related | chr4:8599035-8... 50 3e-06
AT1G32020.1 | Symbols: | F-box family protein | chr1:11512552-1... 50 3e-06
AT1G51370.1 | Symbols: | F-box family protein | chr1:19045615-1... 50 3e-06
AT5G38390.1 | Symbols: | F-box family protein | chr5:15366432-1... 50 3e-06
AT4G00160.1 | Symbols: | F-box family protein | chr4:63465-6536... 50 3e-06
AT5G22660.1 | Symbols: | F-box family protein | chr5:7536906-75... 50 4e-06
AT3G49150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 6e-06
AT5G22730.1 | Symbols: | F-box family protein | chr5:7551632-75... 49 6e-06
AT1G16930.1 | Symbols: | F-box family protein | chr1:5789987-57... 49 6e-06
AT1G56400.1 | Symbols: | F-box family protein | chr1:21111805-2... 49 7e-06
AT3G29830.1 | Symbols: | F-box family protein | chr3:11737049-1... 49 9e-06
AT5G22720.1 | Symbols: | F-box family protein | chr5:7549565-75... 49 9e-06
AT5G53840.1 | Symbols: | F-box family protein (FBL13) | chr5:21... 49 9e-06
>AT3G03360.1 | Symbols: | F-box family protein | chr3:795218-796918
FORWARD
Length = 481
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 114/264 (43%), Gaps = 52/264 (19%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHAS--RSELNFDCKSAGLD 59
D IS+LPD+IL +LS L + A+KT +LSR+WRH++ S R + C
Sbjct: 37 DLISRLPDDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSFHRDRPDAPC------ 90
Query: 60 YTKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRV-----AFCLG-PKFAYDIDRWITFA 113
+N+ L++Y+ P + SFR+ A C+ P DID WI FA
Sbjct: 91 -----------------INRILDRYRAPKMMSFRICSCCRAACISRPDTHADIDSWINFA 133
Query: 114 VKLGVEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELN-SCILKQDF------ 166
+ VE L + Y + + F +++ S LK L L+ C K+DF
Sbjct: 134 MSRNVENLSL--------YLDEDKYDIPEFLYIN--SSLKQLYLDFGC--KKDFISLNPK 181
Query: 167 -NGQLHSLKFIDLIFTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLT 225
+ SLK + L + + ILS C LE L L +C VL + +
Sbjct: 182 CSVSWTSLKNLSLYHCNISDESIAIILSGCPILESLLLFFCKKLKVLDLSKSPRLITLEI 241
Query: 226 VSFCKGLEEIELSATNLTTLEVFG 249
C+ +E +L A ++ L +
Sbjct: 242 TRRCR-MEPTQLVAPHIRCLRLIN 264
>AT5G02700.1 | Symbols: | F-box family protein | chr5:609381-611679
REVERSE
Length = 456
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 74/258 (28%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D I+ +PD+IL +LS + A++T +LSR+WRH++ C++ LD T
Sbjct: 27 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVW--------------CETPCLDIT 72
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
H +N+ L Y P I+SF++ L +D WI FA+ V+ L
Sbjct: 73 LKHGA----------MNQTLTSYTAPIITSFKLVMDLNSNTVPQVDSWIEFALSRNVQNL 122
Query: 122 KIICS--CYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFIDLI 179
+ Y +YR Y +S LK L++ +L F D+I
Sbjct: 123 SVFVRDFTYSKTYRFPDIFYL--------SSSLKLLDV--------------TLDFFDMI 160
Query: 180 FTPLDQSILLFILSMCC----NLERLRLAWCLCPA-----VLSFCGPFLQLKMLTVSFCK 230
T C +L L L +C P +LS C P L+ LT+ C+
Sbjct: 161 PT-------------CTVSWKSLRNLTLRFCQIPDESIHNILSGC-PILE--SLTLDTCR 204
Query: 231 GLEEIELSAT-NLTTLEV 247
LE ++LS + NL L++
Sbjct: 205 LLERLDLSKSPNLRRLDI 222
>AT3G28410.1 | Symbols: | F-box family protein |
chr3:10640152-10642071 REVERSE
Length = 465
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 74/258 (28%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D I+ +PD+IL +LS + A++T +LSR+WRH++ C++ LD
Sbjct: 28 DFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVW--------------CETPCLDIK 73
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
H N+ L Y P I+SF++ L +D WI FA+ V+ L
Sbjct: 74 LKHG----------ETNQTLTSYTAPIITSFKLVMDLNDNTVPQVDSWIEFALSRNVQNL 123
Query: 122 KIICS--CYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFIDLI 179
+ Y +YR Y +S LK L++ +L F D+I
Sbjct: 124 SVFVRDFTYTKTYRFPDIFYI--------SSSLKQLDV--------------TLDFFDMI 161
Query: 180 FTPLDQSILLFILSMCC----NLERLRLAWCLCPA-----VLSFCGPFLQLKMLTVSFCK 230
T C +L L L +C P +LS C P L+ LT+ C+
Sbjct: 162 PT-------------CAVSWKSLRNLTLRFCQIPDESMHNILSGC-PILE--SLTLDTCR 205
Query: 231 GLEEIELSAT-NLTTLEV 247
LE ++LS + NL L++
Sbjct: 206 LLERLDLSKSPNLRRLDI 223
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE
Length = 737
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 181/440 (41%), Gaps = 80/440 (18%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
+D IS+LPDE+L +LS ++ K+AV T +LS++W+++++ S L+ D + + +
Sbjct: 4 KDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLV-----SNLDIDDRQS-VPK 57
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDR---WITFAVKLG 117
TK ++ + + ++ +V+K L+ +G +I + +G + D R WI + G
Sbjct: 58 TKQNRIEIHR-NYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHG 116
Query: 118 VEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELN---SCILKQDFNGQLHSLK 174
V L + + G K + A F+ + L L + + L QD + L
Sbjct: 117 VMDLDVFITLKG----KSPPVPAMIFK----SKTLVKLRVGRGFTIKLSQDVSLPLLRTL 168
Query: 175 FIDLIFTPLDQSILLFILSMCCNLERLRLAWCLCPA-VLSFCGPFLQLKMLTVSFCKGLE 233
+D + +++ ++S C LE L + C S P LK L + F +
Sbjct: 169 CLDSVNFVGGHNVVGTLISRCPVLEELVVEERRCVDWTCSVSSP--SLKRLHIRFDRKFT 226
Query: 234 EIELSATNLTTLEVFGDRTNFNIVFSDVPNLQ-NVLCQKPCTSSFPDDLFKQFENAAPQL 292
I L A NL + G V PN++ + L + + N
Sbjct: 227 SISLDAPNLIYYKHSG------YVLGKYPNVKLDSLIEARLNLRMDETRMVGVRNG---- 276
Query: 293 QSLKYIPSSIATFGN-----------LKQLEFIFYS---------------GNEPYNIWK 326
SL IP+ + N LE +++S GN+ W+
Sbjct: 277 -SLGSIPADMRNLINGIRNVRILHLSSHTLELLYFSCKEMPLFDSLVSLSIGNDKARGWQ 335
Query: 327 IIPVLIA-CPLLQIFNLTIRLGIHLYDAVNIEER---------TMKEIQK-YHYSRLKEV 375
++P+LI P L+ I +G+ Y I R T + I S++K +
Sbjct: 336 MLPLLIKNSPNLETL---IFMGLDHY----ITNRCGDVCVCYDTDESITSCLSSSQVKVL 388
Query: 376 EIGGFQGTETQLALALYFLK 395
EI +QGT +L +FL+
Sbjct: 389 EILSYQGTTRELNQMKHFLE 408
>AT4G10400.2 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 409
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPDE+L +LS + K AV T +LS++W L++ ++L F K
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWL-----TKLKFGSKRYSESEF 56
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
K +C ++++ L ++ P I SFR+ DI W+ AV + +L
Sbjct: 57 KRLQC---------FLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIREL 107
Query: 122 KIICSCYG 129
KI S YG
Sbjct: 108 KIYSSHYG 115
>AT4G10400.1 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 409
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPDE+L +LS + K AV T +LS++W L++ ++L F K
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWL-----TKLKFGSKRYSESEF 56
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
K +C ++++ L ++ P I SFR+ DI W+ AV + +L
Sbjct: 57 KRLQC---------FLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIREL 107
Query: 122 KIICSCYG 129
KI S YG
Sbjct: 108 KIYSSHYG 115
>AT1G78750.1 | Symbols: | F-box family protein |
chr1:29613122-29614695 REVERSE
Length = 458
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 180/443 (40%), Gaps = 73/443 (16%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LP+ +L VL L KD VK+ +LS +WR+L+ + S +F ++ ++
Sbjct: 18 DWISNLPETLLCQVLFYLPTKDVVKSSVLSSRWRNLWKYVPGFNLSYCDFHVRNT---FS 74
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLG----PKFAYDIDRWITFAVKLG 117
H F+++V+ F+ + SFR+ + PK A I RWI V
Sbjct: 75 YDHN------TFLRFVDSFMGFNSQSCLQSFRLEYDSSGYGEPKLAL-IRRWINSVVSRK 127
Query: 118 VEQLKII-CSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFI 176
V+ L ++ SC + LY L +L L+ L L SLK +
Sbjct: 128 VKYLGVLDDSCDNYEFEMPPTLYT--------CETLVYLTLDGLSLASPKFVSLPSLKEL 179
Query: 177 DL-IFTPLDQSILLFILSMCCNLERLRLAWCLCP----------AVLSFCGPFLQLKMLT 225
L I D L ++S C LE L + C ++LSF +ML
Sbjct: 180 HLSIVKFADHMALETLISQCPVLENLNINRSFCDDFEFTCVRSQSLLSFTHVADTDEMLN 239
Query: 226 VSFCKGLEEIELSATNLTTLEVFGDRTN--FNIVFSDVPNLQNVLCQKPCTSSFPDDLFK 283
++ +L L+ + N ++V +D+ + N++C+K P+DL K
Sbjct: 240 EDLVVAIDAPKLKYLRLSDHRIASFILNDLASLVEADIDTVFNLICKKMFN---PNDLNK 296
Query: 284 Q-----FENAAPQLQSLKYIPSSIAT------------FGNLKQLEFIFYSGNEPYNIWK 326
+ F +++L S++ F NL L FY W+
Sbjct: 297 RNMIRDFLVGISSIKTLIIASSTLEVIYDYSRCEPLPLFRNLSSLRVDFYGYK-----WE 351
Query: 327 IIPVLI-ACPLLQIFNLTIRLGIHLY---DAVNIEERTMKEIQKYHYSRLKEVEIGGFQG 382
++P+ + +CP L+ ++ +G Y + +NI + Y +++ +G
Sbjct: 352 MLPIFLESCPNLK----SLVVGSANYREKEGINILSVPRGFLSSLEYVKIER----PLKG 403
Query: 383 TETQLALALYFLKNAVELERMVI 405
++ L Y L+N+ L+++ +
Sbjct: 404 EAMEMKLVSYLLENSTILKKLTL 426
>AT1G49610.1 | Symbols: | F-box family protein |
chr1:18361679-18363192 REVERSE
Length = 354
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 21/120 (17%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPD IL LS + K A++T +LS++WRH++ ++ LD+
Sbjct: 26 DSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVW--------------SETPSLDFD 71
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
+K V +++K L Y+ I +F + G Y ID WI FA+ VE L
Sbjct: 72 DCYKLD------VDFIDKTLALYRARKIMTFDLWITNGINLPY-IDGWIKFAMSRNVENL 124
>AT1G55660.1 | Symbols: | F-box family protein |
chr1:20800694-20802340 FORWARD
Length = 492
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D ISQLPDE+L VLS L+ KDAV T +LS +W+ L++ L+Y
Sbjct: 53 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWL--------------PKLEYN 98
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAF---CLGPKFAYDIDRWITFAVKLG 117
H +++ L +K P I S + F +G DI W++ AV +
Sbjct: 99 FRHYSVSEGQGLARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVS 157
>AT5G03100.1 | Symbols: | F-box family protein | chr5:726832-727980
FORWARD
Length = 307
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 109/277 (39%), Gaps = 60/277 (21%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPDEIL +L+ K A++T +LS++W+H++ ++ C D
Sbjct: 9 DFISSLPDEILHHILANTPTKLAIRTSVLSKRWKHVWYET-----PSISIVCNRVDPDS- 62
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
+NK L+ Y P I SF V +ID WI A+ E +
Sbjct: 63 ---------------LNKTLSSYSTPKIKSFDVTISRDVTVP-EIDTWINLALSRKAENV 106
Query: 122 KIICSCYGISYRKQHELYAFSFQHLSDASELKHLELN--SCILKQDFNGQLHSLKFIDLI 179
+ + + YR + + S LK L L CIL SL+ + L
Sbjct: 107 SLRFTSH---YRFRDTFFI--------NSSLKQLSLTLVYCILNPKCVVSWSSLRNLSLN 155
Query: 180 FTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKGLEEIELSA 239
+ + IL+ C LE LT++ C L +++LS
Sbjct: 156 RCKVSDDSIAKILTGCSLLES-----------------------LTLNLCDRLNDLDLSK 192
Query: 240 T-NLTTLEVFGDR-TNFNIVFSDVPNLQNVLCQKPCT 274
+ +L LE+ GDR T IV + L+ Q+P T
Sbjct: 193 SLSLRRLEILGDRWTPERIVAPHIRYLRLENYQRPST 229
>AT4G09920.1 | Symbols: | F-box family protein |
chr4:6224691-6225905 FORWARD
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D I LPDE+L +LS + K AV T +LS++W L++ ++L F K
Sbjct: 2 DRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWL-----TKLKFGSKRYSESEF 56
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
K +C ++++ L ++ P I SFR+ DI W+ AV + +L
Sbjct: 57 KRLQC---------FLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIREL 107
Query: 122 KIICSCYG 129
KI S YG
Sbjct: 108 KIYSSHYG 115
>AT1G69630.1 | Symbols: | F-box family protein |
chr1:26191640-26193174 REVERSE
Length = 451
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS+LPD +L VL L KD VKT +LSR+WR+L+ GLD
Sbjct: 18 DWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHV--------------PGLDLD 63
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYD---IDRWITFAVKLGV 118
+ Q++ F+ +V+ FL+ + F + + ++ D I RWI V V
Sbjct: 64 NTD-FQEFN-TFLSFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRKV 121
Query: 119 EQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFIDL 178
+ + ++ YG S+ Q ++ + L L+L L L SLK +DL
Sbjct: 122 QHIDVLDDSYG-SWEVQLPSSIYTCESLV------SLKLCGLTLASPEFVSLPSLKVMDL 174
Query: 179 IFTPL-DQSILLFILSMCCNLERLRLAWCLCPAV 211
I T D L +++ C LE L + C +
Sbjct: 175 IITKFADDMGLETLITKCPVLESLTIERSFCDEI 208
>AT3G42770.1 | Symbols: | F-box family protein |
chr3:14867122-14870083 FORWARD
Length = 532
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 7 LPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYTKSHKC 66
LPDE+L +LS L K+A T LLS++WR L+ L+FD +
Sbjct: 4 LPDELLVQILSFLPTKEATSTSLLSKRWRTLF-----TLSPNLDFDNSLLLQSKKRKWNM 58
Query: 67 QQYTCAFVQWVNKFLNQYKGPNISSFRVAF--CLGP-KFAYDIDRWITFAVKLGVEQLKI 123
+ +FV +V+ L G I SF + F LG D++RWI A++ GV +L +
Sbjct: 59 RNIQKSFVGFVDSTLALQGGKGIKSFSLKFKETLGDVNGEVDVNRWICNALEHGVSELHL 118
Query: 124 ICSCYGISYRKQHELYAFSFQHLSDASELKHLEL--NSCILKQDFNGQLHSLK--FIDLI 179
I Y K+ L + F +++L L L SC L SLK F+D I
Sbjct: 119 -----RIDYTKRCHLPSEIFT----STKLVKLSLVTQSCFPVVPNCISLPSLKVLFLDSI 169
Query: 180 FTPLDQSILLFILSMCCNLERLRL 203
+ + Q L L+ C LE L +
Sbjct: 170 WFEVPQ--FLIFLTACPALEDLTI 191
>AT4G26340.1 | Symbols: | F-box family protein |
chr4:13324130-13325559 FORWARD
Length = 419
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D ISQL D++L +LS + KD V T LLS++W+ L++ SEL +D DY
Sbjct: 2 DRISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLV-----SELEYDDSYHTGDYK 56
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPK-FAYDIDRWITFAVKLGVEQ 120
+F Q+V + L P I + LGP A DI WI FA+ + Q
Sbjct: 57 ----------SFSQFVYRSLLSNNAPVIKHLHLN--LGPDCPAIDIGLWIGFALTRRLRQ 104
Query: 121 LKI 123
LKI
Sbjct: 105 LKI 107
>AT3G44810.1 | Symbols: | F-box family protein |
chr3:16358496-16359983 REVERSE
Length = 448
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 7 LPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYTKSHKC 66
LPDE+L VLS L K A T +LS++WR L+ A R L+FD
Sbjct: 12 LPDELLVHVLSSLETKQAASTSVLSKRWRTLF-----AVRRNLDFDDSIISHPEVGEQNM 66
Query: 67 QQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKF-AYDIDRWITFAVKLGVEQLKIIC 125
+F +V+K L I+ F + + G K +DRWI A++ GV +L +
Sbjct: 67 DDVQESFRDFVDKRLAFQGSVPINKFSLIY--GDKHDDVRVDRWINTALEHGVSELHL-- 122
Query: 126 SCYGISYRKQHELYAFSFQ 144
C R+ H + F+
Sbjct: 123 -CLTSVTRRLHRFPSNVFR 140
>AT5G02930.1 | Symbols: | F-box family protein | chr5:682577-684480
FORWARD
Length = 469
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 38/211 (18%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPD +L + S + + A++T +LS++WRH++ H S L K
Sbjct: 28 DSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSFEWLKVSPK------- 80
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRW-----ITFAVKL 116
+NK L Y I SF L +++Y+ D I FA+
Sbjct: 81 --------------LINKTLASYTASKIKSFH----LCTRYSYEADTHHVNSSIEFAMSH 122
Query: 117 GVEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFI 176
V+ L +++R+ Y F +++S LK +EL L SLK +
Sbjct: 123 NVDDL-------SLAFRRCSPFYNFDDCFYTNSS-LKRVELRYVDLMPRCMVSWTSLKNL 174
Query: 177 DLIFTPLDQSILLFILSMCCNLERLRLAWCL 207
L + L ILS C LE L L +C+
Sbjct: 175 SLTDCTMSDESFLEILSGCPILESLSLKFCM 205
>AT3G52680.2 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 456
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 176/433 (40%), Gaps = 69/433 (15%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
+D IS+LPD +L +LS L V T +LS++WR L+ L FD DY
Sbjct: 20 KDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLW-----KLVPNLEFDSD----DY 70
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFC-LGPKFAYDIDRWITFAVKLGVE 119
H YT F + V K +K P + SFR+ F P DI W+ A +
Sbjct: 71 ESEH----YT--FSEIVCKSFLSHKAPVLESFRLKFVNFNP---VDIGLWVGIAFSRHLR 121
Query: 120 QLKIICSCYGISYRKQHELYAFSF-QHLSDASELKHLELNSCILKQDFNGQL-HSLKFID 177
+L + Y K F+F L + L+ L+L CIL + L SL+ +
Sbjct: 122 EL--VLDFYPAELGKG---VTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLH 176
Query: 178 LIFTPL-DQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKGLEEIE 236
L F D+S + +LS C LE LRL + G +K+ T IE
Sbjct: 177 LEFVRYKDESSVRNLLSGCPGLEELRL----------YRGDDSDIKVFT---------IE 217
Query: 237 LSATNLTTLEVFGDRTNFNIVFSDVPNLQNVLCQKPCTSSFPDDLFKQFENAAPQLQSLK 296
+ + T+ D F + P L+ +L ++ F + + E ++ S+
Sbjct: 218 VPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPELVEANIAEVTSIT 277
Query: 297 YIPSSIATFG-------NLKQLEFIFYSGNEPYNI------------WKIIPVLIA-CPL 336
I + +F NL L+ + +G+ Y + W ++ +++ P
Sbjct: 278 -IEKFLGSFTSVSRLLLNLSPLKITYPTGSMFYQLVSLEMYTREAEWWNLLTLMLENSPK 336
Query: 337 LQIFNLTIR-LGIHLYDAVNIEERTMKEIQKYHYSRLKEVEIGGFQ-GTETQLALALYFL 394
LQ+ LT R H V+ + K++ + S+L+ F G E + +A Y L
Sbjct: 337 LQVLKLTDRSQNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRFDWGREEEKEIATYIL 396
Query: 395 KNAVELERMVISS 407
KN L++ S+
Sbjct: 397 KNGRRLKKATFST 409
>AT3G52680.1 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 456
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 176/433 (40%), Gaps = 69/433 (15%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
+D IS+LPD +L +LS L V T +LS++WR L+ L FD DY
Sbjct: 20 KDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLW-----KLVPNLEFDSD----DY 70
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFC-LGPKFAYDIDRWITFAVKLGVE 119
H YT F + V K +K P + SFR+ F P DI W+ A +
Sbjct: 71 ESEH----YT--FSEIVCKSFLSHKAPVLESFRLKFVNFNP---VDIGLWVGIAFSRHLR 121
Query: 120 QLKIICSCYGISYRKQHELYAFSF-QHLSDASELKHLELNSCILKQDFNGQL-HSLKFID 177
+L + Y K F+F L + L+ L+L CIL + L SL+ +
Sbjct: 122 EL--VLDFYPAELGKG---VTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLH 176
Query: 178 LIFTPL-DQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKGLEEIE 236
L F D+S + +LS C LE LRL + G +K+ T IE
Sbjct: 177 LEFVRYKDESSVRNLLSGCPGLEELRL----------YRGDDSDIKVFT---------IE 217
Query: 237 LSATNLTTLEVFGDRTNFNIVFSDVPNLQNVLCQKPCTSSFPDDLFKQFENAAPQLQSLK 296
+ + T+ D F + P L+ +L ++ F + + E ++ S+
Sbjct: 218 VPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPELVEANIAEVTSIT 277
Query: 297 YIPSSIATFG-------NLKQLEFIFYSGNEPYNI------------WKIIPVLIA-CPL 336
I + +F NL L+ + +G+ Y + W ++ +++ P
Sbjct: 278 -IEKFLGSFTSVSRLLLNLSPLKITYPTGSMFYQLVSLEMYTREAEWWNLLTLMLENSPK 336
Query: 337 LQIFNLTIR-LGIHLYDAVNIEERTMKEIQKYHYSRLKEVEIGGFQ-GTETQLALALYFL 394
LQ+ LT R H V+ + K++ + S+L+ F G E + +A Y L
Sbjct: 337 LQVLKLTDRSQNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRFDWGREEEKEIATYIL 396
Query: 395 KNAVELERMVISS 407
KN L++ S+
Sbjct: 397 KNGRRLKKATFST 409
>AT1G13570.1 | Symbols: | F-box family protein |
chr1:4642528-4643930 REVERSE
Length = 416
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LP I+ ++L+ L+++DA++T +LS KWR Y ++ ++L FD K
Sbjct: 6 DFISDLPQSIIENILTRLSIRDAIRTSVLSSKWR-----YKWSTLTDLVFDEKCVS---P 57
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
+ +C T V+++ L ++GP I F+++ + DID+W+ F + G+++L
Sbjct: 58 SNDRCVVET-NLVRFITGVLLLHQGP-IHKFQLSTSFK-QCRPDIDQWLLFLSRNGIKEL 114
>AT5G25860.1 | Symbols: | F-box family protein |
chr5:9016908-9018424 REVERSE
Length = 448
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
D ++ LPDEILA +LS L K AV T L+S++WR+L+ + S+ + + L Y
Sbjct: 11 RDAVNCLPDEILAKILSYLPTKRAVSTSLISKRWRNLFALMIQLFESQHHLYLDDSDLVY 70
Query: 61 TKSHKCQQYTC--AFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGV 118
+ K + +F +V+K L I + L DID+W+ A++ GV
Sbjct: 71 PEEGKGEMKDVQESFGDFVDKTLTDCN--TIKKLSILCPLKCCAHKDIDQWLHHAMERGV 128
Query: 119 EQLKI 123
L +
Sbjct: 129 VDLDM 133
>AT5G54820.1 | Symbols: | F-box family protein |
chr5:22269859-22271777 FORWARD
Length = 472
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 20/230 (8%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSE---LNFDCKSAG 57
+D +S LPD +L ++S L +K+ V+T +LS++WR+L L + S E +N D A
Sbjct: 6 QDRLSSLPDILLIMIISFLPLKECVRTSVLSKRWRYLCLETTNLSFKESDYVNPDITDA- 64
Query: 58 LDYTKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLG 117
+Y++ + + C+ +WV+ +Q + SF + F F ID I +AV
Sbjct: 65 -EYSRIVAYRSFFCSVDKWVSITQHQV----VESFEICFSHLVGFEDKIDALIEYAVSTR 119
Query: 118 VEQLKIICSCYG------ISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLH 171
V+ L + S ISYR H +Y + + + L+ L++ C K D + ++
Sbjct: 120 VKNLVVDLSNPSWRSNGDISYR--HFMYTLP-KSVYSLTTLESLKIYGC--KFDPSKFVN 174
Query: 172 SLKFIDLIFTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQL 221
+ L + L +LS +L+ L + C + S G F +L
Sbjct: 175 PVLLRSLSIGWVRLENLHSLLSKSPSLQSLSIKNCWGVDITSMAGQFREL 224
>AT5G02910.1 | Symbols: | F-box family protein | chr5:677120-678907
FORWARD
Length = 458
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPDEIL +LS + K A++T LLS++WR Y+ + L+ DC+ A +
Sbjct: 11 DFISSLPDEILHHILSSVPTKSAIRTSLLSKRWR-----YVWSETPSLSIDCRRADPNS- 64
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
++K L+ + P I+SF + L + ++ I FA+ E+L
Sbjct: 65 ---------------IDKTLSFFSAPKITSFHLHTTLLNRID-SVNGCIEFAISHNAEKL 108
Query: 122 KIICSCYGI 130
+ Y +
Sbjct: 109 SLESRDYRV 117
>AT1G80960.3 | Symbols: | F-box protein-related |
chr1:30416065-30418220 FORWARD
Length = 462
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 181/434 (41%), Gaps = 79/434 (18%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS+LPD++L +LS L+ ++A++T ++S++W H++ H L FD + +
Sbjct: 50 DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSH-----LVFDMRK---NII 101
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYD-----IDRWITFAVKL 116
S+ + + + +N ++G + C+ Y ++ WI +
Sbjct: 102 NSNNTLDGSNPVATLITQVINNHRG------HLESCVIIHVPYQGGNGMLNSWIRLLSCV 155
Query: 117 GVEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFN----GQLHS 172
++ + YG ++ ++ + + FS LS S L L L+S L+ L +
Sbjct: 156 KRTKVLTLRYHYG-TWDRKFKTFNFSPDSLSHPS-LMSLSLHSYFLESSHPLRNCSNLRT 213
Query: 173 LKFIDLIFTPLDQSILLFILSMCCNLERLRLAW-CLCPAVLSFCGPFLQLKMLTVSFCKG 231
LK + ++ + + +L+ C LE L L C + + +LK+L VS +
Sbjct: 214 LKLLSIVAPEI--GVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSSLER 271
Query: 232 LEEIELSATNLTTLEVFGDRTNFNIVFSDVPNLQNVLCQKPCTSSFPDDLFKQFENAAPQ 291
++ IE+S T+L L + ++ C++ DDL Q +PQ
Sbjct: 272 IDAIEVSTTSLDILAII-----------------DICCRR-------DDLSLQ----SPQ 303
Query: 292 LQSLK-------YIPS---SIATFGNLKQLEFIFYSGNEPYNIWKIIPVLIACPLLQIFN 341
LQ + Y+P +I+ ++ EF+ N Y + ++ VL +I
Sbjct: 304 LQFNRNFWVLGPYVPHISYNISEEKSIGNEEFV----NTIYEVERLRQVL-GLWTRKILE 358
Query: 342 LTI--------RLGIHLYDAVNIEERTMKEIQKYHYSRLKEVEIGGFQGTETQLALALYF 393
L I R +D E+ K+ R+ V + F G+E + AL
Sbjct: 359 LEIIFKDNNGPREENKSWDKKLWEDNNKKDPFPNAKFRVDTVWMYNFSGSEEEFALMTCL 418
Query: 394 LKNAVELERMVISS 407
++ +E+M+I +
Sbjct: 419 IRQGTVVEKMMIKT 432
>AT4G26350.1 | Symbols: | F-box family protein |
chr4:13326853-13328315 FORWARD
Length = 431
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 32/209 (15%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D ISQ PD +L +LS + KD + T LLS++W L+ +L + D+T
Sbjct: 2 DIISQCPDHLLLRILSFIPTKDVIVTSLLSKRWGSLWRWV-----PKLEY-------DFT 49
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCL--GPKFAYDIDRWITFAVKLGVE 119
+ + FV++V + L Q P + S + + DI WI AV V
Sbjct: 50 RQNM------RFVKFVYRSLLQNNAPVLESLHLKNIILYAECRTVDIGGWIDIAVSRRVR 103
Query: 120 QLKIICSCYGISYRKQHELYAF----SFQHLSDASELKHLELNSCILKQDFNGQLHSLKF 175
+L+I +C +R LY SF L + L C+ +LH L+
Sbjct: 104 ELEISINCSDEKFRLPSSLYTCGTLESFILTIKHCHLVDVPLAVCLPSLK---KLH-LRC 159
Query: 176 IDLIFTPLDQSILLFILSMCCNLERLRLA 204
I + + LL ++S C NLE LRLA
Sbjct: 160 IGWAY----NATLLRLISGCTNLEELRLA 184
>AT5G56420.2 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 422
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 180/443 (40%), Gaps = 94/443 (21%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
D +SQLPD+ L +LS L KD + T LLS++WR L+ LN+D
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLV-----PRLNYDL------- 52
Query: 61 TKSHKCQQYTCA-FVQWVNKFLNQYKGPNISSFRV---AFCLGPKFAYDIDRWITFAVKL 116
+ TC F Q+V++ L +K P + S + + C + D+ W+ V
Sbjct: 53 ----RLHDNTCPRFSQFVDRSLLLHKAPTLESLNIKIGSICFTAE--KDVGVWVRIGVDR 106
Query: 117 GVEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFN-----GQLH 171
V +L +SY E + L S L L+L + L +D + L
Sbjct: 107 FVREL-------SVSYCSGEEPIRLP-KCLFTCSTLAVLKLENITL-EDASCYVCFQSLK 157
Query: 172 SLKFIDLIFTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKG 231
+L +D+ + LD L I+S C +LE L + C P +K++TV+
Sbjct: 158 TLHLLDVKY--LDDQSLPRIISSCSSLEDLVVQRC----------PGDNVKVVTVT-APS 204
Query: 232 LEEIELSATNLTTLEVF-GDRTNFNIVFSDVPNLQNVLCQK------------PCTSSFP 278
L+ + L ++ + F GD F I D P L+ V + +
Sbjct: 205 LKTLSLHKSS----QAFEGDDDGFLI---DTPKLKRVDIEDYWGGFCYIENMPEVVEANV 257
Query: 279 DDLFKQFENAAPQLQSLKYIPSSIAT----------FGNLKQLEFIFYSGNEPYNIWKII 328
D ++K E + S+K + + T F L LE + W ++
Sbjct: 258 DVIYKNTEKLLGSITSVKRLALCLITSDAAYPAGTIFSQLVHLELCTCAP----RWWDLL 313
Query: 329 PVLIA-CPLLQIFNLTIRLGIHLYDA----VNIEERTMKEIQKYHYSRLKEVEIGGFQGT 383
LI P L++ L + H+ A + ++ + + +H L+ + ++G+
Sbjct: 314 TRLIEDSPKLRVLKLRQK---HIRRAPSPRASWKQPALPKCLLFH---LETFKWELYEGS 367
Query: 384 ETQLALALYFLKNAVELERMVIS 406
+ Q +A + LK+A+ L+ +IS
Sbjct: 368 QKQKEVATFILKHAIRLKTAIIS 390
>AT5G56420.1 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 422
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 180/443 (40%), Gaps = 94/443 (21%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
D +SQLPD+ L +LS L KD + T LLS++WR L+ LN+D
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLV-----PRLNYDL------- 52
Query: 61 TKSHKCQQYTCA-FVQWVNKFLNQYKGPNISSFRV---AFCLGPKFAYDIDRWITFAVKL 116
+ TC F Q+V++ L +K P + S + + C + D+ W+ V
Sbjct: 53 ----RLHDNTCPRFSQFVDRSLLLHKAPTLESLNIKIGSICFTAE--KDVGVWVRIGVDR 106
Query: 117 GVEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFN-----GQLH 171
V +L +SY E + L S L L+L + L +D + L
Sbjct: 107 FVREL-------SVSYCSGEEPIRLP-KCLFTCSTLAVLKLENITL-EDASCYVCFQSLK 157
Query: 172 SLKFIDLIFTPLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKG 231
+L +D+ + LD L I+S C +LE L + C P +K++TV+
Sbjct: 158 TLHLLDVKY--LDDQSLPRIISSCSSLEDLVVQRC----------PGDNVKVVTVT-APS 204
Query: 232 LEEIELSATNLTTLEVF-GDRTNFNIVFSDVPNLQNVLCQK------------PCTSSFP 278
L+ + L ++ + F GD F I D P L+ V + +
Sbjct: 205 LKTLSLHKSS----QAFEGDDDGFLI---DTPKLKRVDIEDYWGGFCYIENMPEVVEANV 257
Query: 279 DDLFKQFENAAPQLQSLKYIPSSIAT----------FGNLKQLEFIFYSGNEPYNIWKII 328
D ++K E + S+K + + T F L LE + W ++
Sbjct: 258 DVIYKNTEKLLGSITSVKRLALCLITSDAAYPAGTIFSQLVHLELCTCAP----RWWDLL 313
Query: 329 PVLIA-CPLLQIFNLTIRLGIHLYDA----VNIEERTMKEIQKYHYSRLKEVEIGGFQGT 383
LI P L++ L + H+ A + ++ + + +H L+ + ++G+
Sbjct: 314 TRLIEDSPKLRVLKLRQK---HIRRAPSPRASWKQPALPKCLLFH---LETFKWELYEGS 367
Query: 384 ETQLALALYFLKNAVELERMVIS 406
+ Q +A + LK+A+ L+ +IS
Sbjct: 368 QKQKEVATFILKHAIRLKTAIIS 390
>AT4G13960.1 | Symbols: | F-box family protein |
chr4:8060681-8062231 REVERSE
Length = 434
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D +S LPDE+L +LS LT K+A T +LS++WR+L+ +++ N D + +
Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLF-TFVP------NLDIDDSVFLHP 54
Query: 62 KSHKCQQYTC--AFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVE 119
+ K +Y +F+++V++ L I + G ++ +D WI+ A+ GV
Sbjct: 55 QEGKEDRYEIQKSFMKFVDRVLALQGNSPIKKLSLKLRTGFD-SHRVDGWISNALARGVT 113
Query: 120 QLKII 124
+L ++
Sbjct: 114 ELDLL 118
>AT5G56690.1 | Symbols: | F-box family protein |
chr5:22939723-22941099 FORWARD
Length = 402
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 4 ISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYTKS 63
IS LPD++L +L+ L K A+ T +LS++WR L++ +L + + ++D + G + +
Sbjct: 4 ISGLPDDLLVKILAFLPTKVAISTSVLSKQWRFLWM-WLPKLKYD-DYDDITDGFNSVSA 61
Query: 64 HKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQLKI 123
+ + ++ K L ++ P I S + F G D+ W+ AV V +L I
Sbjct: 62 FQ------TYRDFIAKNLPLHRAPIIESLSLGFRCGTLQPEDLKSWVEVAVSRSVRELSI 115
Query: 124 ICSCYGISYRKQHELYAFSFQHLSDASELKHLEL------NSCILKQDFNGQLHSLKFID 177
+ YR + L + S LK + C+L +L +++
Sbjct: 116 LA-----YYRNNYALSSSSLYTCKSLVTLKGFNIRVDVPPTVCLLPSLRTLELKRVRY-- 168
Query: 178 LIFTPLDQSILLFILSMCCNLERLRL 203
L++ L +LS C LE L +
Sbjct: 169 -----LNEDSLRMLLSFCPVLEYLSI 189
>AT1G80960.1 | Symbols: | F-box protein-related |
chr1:30416065-30418220 FORWARD
Length = 486
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 28/257 (10%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS+LPD++L +LS L+ ++A++T ++S++W H++ H L FD + +
Sbjct: 50 DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSH-----LVFDMRK---NII 101
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYD-----IDRWITFAVKL 116
S+ + + + +N ++G + C+ Y ++ WI +
Sbjct: 102 NSNNTLDGSNPVATLITQVINNHRG------HLESCVIIHVPYQGGNGMLNSWIRLLSCV 155
Query: 117 GVEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFN----GQLHS 172
++ + YG ++ ++ + + FS LS S L L L+S L+ L +
Sbjct: 156 KRTKVLTLRYHYG-TWDRKFKTFNFSPDSLSHPS-LMSLSLHSYFLESSHPLRNCSNLRT 213
Query: 173 LKFIDLIFTPLDQSILLFILSMCCNLERLRLAW-CLCPAVLSFCGPFLQLKMLTVSFCKG 231
LK + ++ + + +L+ C LE L L C + + +LK+L VS +
Sbjct: 214 LKLLSIVAPEI--GVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSSLER 271
Query: 232 LEEIELSATNLTTLEVF 248
++ IE+S T+L L +
Sbjct: 272 IDAIEVSTTSLDILAII 288
>AT1G80960.2 | Symbols: | F-box protein-related |
chr1:30416065-30418220 FORWARD
Length = 486
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 28/257 (10%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS+LPD++L +LS L+ ++A++T ++S++W H++ H L FD + +
Sbjct: 50 DWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSH-----LVFDMRK---NII 101
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYD-----IDRWITFAVKL 116
S+ + + + +N ++G + C+ Y ++ WI +
Sbjct: 102 NSNNTLDGSNPVATLITQVINNHRG------HLESCVIIHVPYQGGNGMLNSWIRLLSCV 155
Query: 117 GVEQLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFN----GQLHS 172
++ + YG ++ ++ + + FS LS S L L L+S L+ L +
Sbjct: 156 KRTKVLTLRYHYG-TWDRKFKTFNFSPDSLSHPS-LMSLSLHSYFLESSHPLRNCSNLRT 213
Query: 173 LKFIDLIFTPLDQSILLFILSMCCNLERLRLAW-CLCPAVLSFCGPFLQLKMLTVSFCKG 231
LK + ++ + + +L+ C LE L L C + + +LK+L VS +
Sbjct: 214 LKLLSIVAPEI--GVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSSLER 271
Query: 232 LEEIELSATNLTTLEVF 248
++ IE+S T+L L +
Sbjct: 272 IDAIEVSTTSLDILAII 288
>AT5G22660.2 | Symbols: | F-box family protein |
chr5:7536328-7537853 REVERSE
Length = 450
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
ED IS LPD +L+ +LS L ++AV T +LS +W+ L+LS + LD
Sbjct: 12 EDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLS--------------TPVLDI 57
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQ 120
T F+ + +FL+ +K + +++F + + I WI AVK ++
Sbjct: 58 DIDAFDDATT--FISFATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQH 115
Query: 121 LKI 123
L++
Sbjct: 116 LEV 118
>AT5G02920.1 | Symbols: | ubiquitin-protein ligase |
chr5:680541-681317 FORWARD
Length = 258
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 33/207 (15%)
Query: 2 DCISQLPDEILASVLS*LTVKD-AVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
D IS LPDEIL +LS + + ++T +LS++WRH++ H L+F
Sbjct: 28 DSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPH-----LSF--------- 73
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKF-AYDIDRWITFAVKLGVE 119
++ + +NK L Y I+SF + C + A + I FA+ V+
Sbjct: 74 -------EWLMVSPKLINKTLASYTASKITSFHL--CTSYSYEAGHVHSSIEFAMSHNVD 124
Query: 120 QLKIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFIDLI 179
L + S + + Y +S LK +EL S L SL+ + L
Sbjct: 125 NLSLAFSSFPPCNKFPDFFYT--------SSSLKRVELRSASLTPSCIVSWTSLRDLSLT 176
Query: 180 FTPLDQSILLFILSMCCNLERLRLAWC 206
L L ILS C LE L L +C
Sbjct: 177 RCNLSDKSFLKILSGCPILESLSLKFC 203
>AT1G51370.2 | Symbols: | F-box family protein |
chr1:19045615-19046748 FORWARD
Length = 346
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLD- 59
ED ISQLP+ +++ +L L+ KD+V+T LS KWR+L+ S GLD
Sbjct: 18 EDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSV--------------PGLDL 63
Query: 60 --YTKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLG 117
Y S+ T V +V F + ++ I R+ YD+ WI A
Sbjct: 64 DPYASSN-----TNTIVSFVESFFDSHRDSWIRKLRLDLGYHHD-KYDLMSWIDAATTRR 117
Query: 118 VEQLKIIC 125
++ L + C
Sbjct: 118 IQHLDVHC 125
>AT3G03040.1 | Symbols: | F-box family protein | chr3:684685-686277
FORWARD
Length = 472
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 175/452 (38%), Gaps = 101/452 (22%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D +S LPDE+ +LS LT K++ T +LS+KWR+L+ A L+FD
Sbjct: 2 DLLSSLPDEVRCLILSFLTTKESASTSVLSKKWRNLF-----ALVPNLDFDDSEFLHPEE 56
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
+ +F+ +V++ L+ +I F + G A ++RW+ ++ V +
Sbjct: 57 GKRERDGILQSFMDFVDRVLSLQGNSSIRKFSLKCETGVPPAR-VNRWLCEVLQRDVSDI 115
Query: 122 KIICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFIDLIFT 181
+ G Y EL+ + L +L+L S + G +
Sbjct: 116 DLTID-LGYGYYLPEELFV--------SETLVNLKLKSAFNIDWWPGAEGT-------SL 159
Query: 182 PLDQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKGLEEIE-LSAT 240
P+ +S+ ++ + + C+ E L C F L+ L +S + L+ E +S+
Sbjct: 160 PMLKSLCVYGVRVFCDDELQELLPC-----------FPVLEELQMSNMQWLDSDETVSSA 208
Query: 241 NLTTLEVFGDRT-NFNIVFSDVPNLQNVLCQKPCTSSFP-----------------DDLF 282
LTTL + G R+ N + D PNL + + +P DD
Sbjct: 209 TLTTLHITGIRSENPKSISFDTPNLLSFVYTDFVAEDYPLVNMKNLSLARLALRANDDQI 268
Query: 283 KQFE----------------------NAAPQLQSLKYIPS----------SIATFGNLKQ 310
K+ N +Q L P S+ F N+K+
Sbjct: 269 KRVRGPSNDLLEYDVVRHFGNVVKLMNGIQNVQELHLCPDTLELLSVCCESMPVFNNVKK 328
Query: 311 LEFIFYSGNEPYNIWKIIPVLIA-CPLLQ-------IFNLTIRLGIHLYDAVNIEERTMK 362
L + YS + W+ +PVL+ CP L+ + ++T + G DA + R K
Sbjct: 329 L--LIYSDED--RGWQAVPVLLRNCPRLETLIFEGIVHHVTDKCG----DACDCIFRKDK 380
Query: 363 EIQKYHYSRLKEVEIGGFQGTETQLALALYFL 394
+ +K VEI GF T + L +FL
Sbjct: 381 G-RSLKSCPVKVVEINGFGVTMKEKYLIEHFL 411
>AT3G58880.1 | Symbols: | F-box family protein |
chr3:21768485-21770167 REVERSE
Length = 454
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 48/221 (21%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D +S LPD++L +LS LT K+A T +LS++WR YL A L FD SA L+
Sbjct: 3 DLVSSLPDDLLGHILSLLTTKEAALTSILSKRWR-----YLIAFVPYLEFD-DSAFLNPE 56
Query: 62 KSHKCQQYT-CAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDID---RWITFAVKLG 117
+ + ++ T +F+ +V++ L + I F L K D+D +WI ++ G
Sbjct: 57 EGKQTREGTRQSFIDFVDRVLALHGDSPIRKFS----LKCKTGVDLDLLNQWICNVLQRG 112
Query: 118 VEQLKIICS----CYGISYRKQHELY----------AFSFQHLSDASELKHLELNSCILK 163
V + + C I L AF +H+S LK L L+S +
Sbjct: 113 VLLIDLSMDLGHRCMFIEIFMSRTLVELKLGSGCRIAFGPEHISALPMLKTLTLDS--VS 170
Query: 164 QDFNGQLHSLKFIDLIFTPLDQSILLFILSMCCNLERLRLA 204
+GQL L LS C LE L LA
Sbjct: 171 WSDSGQLERL------------------LSACPALEALNLA 193
>AT1G58310.1 | Symbols: | F-box family protein |
chr1:21631947-21633642 FORWARD
Length = 505
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 25/138 (18%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFD--------- 52
D IS LPD +L +LS L K+A T +L++KWR YL AS L+FD
Sbjct: 8 DIISGLPDSLLCHILSFLNTKEAASTSVLAKKWR-----YLFASVPNLDFDDSVHLRLGK 62
Query: 53 --CKSAGLDYTK--SHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDR 108
+G DY K + + Q + +F+ +V++ L + F + + DI R
Sbjct: 63 RNPAVSGEDYLKMINERSDQLSTSFMDFVDQVLRLQDNSPLHKFSLKI----RDCVDIVR 118
Query: 109 ---WITFAVKLGVEQLKI 123
WI ++ GV L++
Sbjct: 119 IICWILKVLERGVSDLEL 136
>AT4G15060.1 | Symbols: | F-box protein-related |
chr4:8599035-8601761 FORWARD
Length = 572
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS+LPD++L VL L K AV T +LS++W L++ L+Y
Sbjct: 172 DKISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWL--------------PKLEYH 217
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKF-AYDIDRWITFAVKLGVEQ 120
++ ++N L ++ P I S R+ F LG +I +WI AV V +
Sbjct: 218 NTNYSASEEQRLRSFINLNLQLHRAPIIESLRLKFSLGRSIKPQNIKQWIIIAVFRCVRE 277
Query: 121 LKI 123
L I
Sbjct: 278 LSI 280
>AT1G32020.1 | Symbols: | F-box family protein |
chr1:11512552-11513067 REVERSE
Length = 171
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPD ++A ++S L +KD++KT +LS++W ++L + D K+ D+
Sbjct: 4 DRISTLPDHLVAKIVSYLGIKDSIKTSVLSKRWEFVWLKV-------VGLDLKNC--DFP 54
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
+ Q VNK++ G ++ F+V F WI AV GV+ L
Sbjct: 55 PNGIASQMV------VNKYMEFNSGLHMQYFKVNFGGNTVCTNRFLEWIATAVDRGVQHL 108
>AT1G51370.1 | Symbols: | F-box family protein |
chr1:19045615-19047141 FORWARD
Length = 435
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLD- 59
ED ISQLP+ +++ +L L+ KD+V+T LS KWR+L+ S GLD
Sbjct: 18 EDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSV--------------PGLDL 63
Query: 60 --YTKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLG 117
Y S+ T V +V F + ++ I R+ YD+ WI A
Sbjct: 64 DPYASSN-----TNTIVSFVESFFDSHRDSWIRKLRLDLGYHHD-KYDLMSWIDAATTRR 117
Query: 118 VEQLKIIC 125
++ L + C
Sbjct: 118 IQHLDVHC 125
>AT5G38390.1 | Symbols: | F-box family protein |
chr5:15366432-15368053 FORWARD
Length = 456
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 187/438 (42%), Gaps = 83/438 (18%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D +S LP E+L +LS LT K+A T +LS++WR+L ++++ N D
Sbjct: 2 DLLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNL-IAFVP------NVD--------I 46
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
H ++ F+ +V++ L I+ F + C G + +D WI + GV +L
Sbjct: 47 VDHDIREL---FMDFVDRVLALQGNSPINKFSLD-CSGVD-SDRVDCWIQNVMVRGVSEL 101
Query: 122 KI---ICSCYGISYR------KQHELYAFSFQHLS--DAS----ELKHLELNSCILK-QD 165
+ + S + Y + +L ++S D S LK L L S +L +
Sbjct: 102 NLSIFVDSVFEDDYNLFPKVFENKKLVKLGLSYISWLDGSIFLPMLKTLVLESVLLSVEK 161
Query: 166 FNGQLHSLKFID-LIFTPL---DQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQL 221
F LH+L ++ L+ + ++ ++ I+S +L+ L + + +C LSF P L
Sbjct: 162 FEILLHALPALEELVMNNIYWKERDVVDLIVS-SESLKTLTINFIVCTHTLSFDTPILA- 219
Query: 222 KMLTVSFCKGLEEIELSATNLTTLEVFGDRTNFNIVFSDVPNLQNVLCQKPCTSSFPDDL 281
L+ S + E NL F R + +V D+ ++ ++ D L
Sbjct: 220 -YLSYSGYVVDDYAEAKMENL-----FEARISLLVVEGDISRVRALINNDLLEDDEYDVL 273
Query: 282 FKQFENAAPQLQSLKYIP----------------SSIATFGNLKQLEFIFYSGNEPYNIW 325
QFEN + ++ I S+ F NLK L I + N W
Sbjct: 274 --QFENVWKLMNGIRNIRCLYLSPNTLEVLSLCCESMPVFKNLKSLS-IKSAENRG---W 327
Query: 326 KIIPVLIA-CPLLQ-------IFNLTIRLGIHLYDAVNIEERTMKEIQKYHYSRLKEVEI 377
+ +PVL+ CP L+ + ++T + G DA + R K + +K +EI
Sbjct: 328 QAMPVLLRNCPHLETLVLEGLLHHVTDKCG----DACDCVSREDKG-RSLTSCPVKVLEI 382
Query: 378 GGFQGTETQLALALYFLK 395
GFQGT ++ + +FL+
Sbjct: 383 KGFQGTTKEMNMIKHFLE 400
>AT4G00160.1 | Symbols: | F-box family protein | chr4:63465-65365
FORWARD
Length = 453
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
+D IS+LPD +L +LS L K V T + S++WR L+ L FD + DY
Sbjct: 15 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLW-----KLVPNLEFDSE----DY 65
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQ 120
+QYT F + V K +K P + SFR+ F DI W+ A + +
Sbjct: 66 DDK---EQYT--FSEIVCKSFLSHKAPVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRE 120
Query: 121 LKIICSCYG 129
L ++ + G
Sbjct: 121 LVLVAADTG 129
>AT5G22660.1 | Symbols: | F-box family protein |
chr5:7536906-7537853 REVERSE
Length = 315
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
ED IS LPD +L+ +LS L ++AV T +LS +W+ L+LS + LD
Sbjct: 12 EDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLS--------------TPVLDI 57
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQ 120
T F+ + +FL+ +K + +++F + + I WI AVK ++
Sbjct: 58 DIDAFDDATT--FISFATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQH 115
Query: 121 LKI 123
L++
Sbjct: 116 LEV 118
>AT3G49150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: protein insertion into membrane; LOCATED
IN: integral to membrane; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), 60 kDa inner membrane insertion
protein (InterPro:IPR001708), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G59240.1); Has
1228 Blast hits to 1197 proteins in 21 species: Archae -
0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 1199;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:18218858-18221877 FORWARD
Length = 630
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
+D IS LP+ ++ +LS L ++D+ T +LS+KW+HL+ A R L FD L+
Sbjct: 15 KDIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLF-----AFRPNLEFDDAVVYLNP 69
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQ 120
++ F +V++ L+ I+ F + C + RWI+ ++ GV
Sbjct: 70 DG----ERNETIFENFVDRVLSLQGDYPINKFSLT-CRDFTDPTCVSRWISNVMERGVSD 124
Query: 121 LKIICSCY 128
L + C Y
Sbjct: 125 LDLRCIVY 132
>AT5G22730.1 | Symbols: | F-box family protein |
chr5:7551632-7553219 REVERSE
Length = 466
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
ED IS+LPD ++ +L L +KD V+T LS +W+ L+L L+ D
Sbjct: 27 EDLISKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWLLI-----PRLDLD-------- 73
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYD---IDRWITFAVKLG 117
S + Q Y AFV ++NKF++ I ++ K D + RWI F V+
Sbjct: 74 --SEEFQDYN-AFVGFMNKFIDFSGEEKICLDKLKLS-SRKTVNDLPCVTRWIDFVVRRK 129
Query: 118 VEQLKIIC 125
++ L + C
Sbjct: 130 LKHLDVEC 137
>AT1G16930.1 | Symbols: | F-box family protein |
chr1:5789987-5791534 FORWARD
Length = 449
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 33/173 (19%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPD +L +LS L+ K++V T +LS++WR+L+L L+ D + D
Sbjct: 15 DRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHV-----PVLDLDSNNFPDDD- 68
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGV--- 118
FV +VN+FL ++ F++ + + A WI +K V
Sbjct: 69 ----------VFVSFVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHF 118
Query: 119 ----------EQLKIICSCYGISYRKQHELYAFSFQHLSDAS----ELKHLEL 157
E +K+ S Y +LY + H S ++ HL++
Sbjct: 119 NVHNEVDDDDELVKMPLSLYSCERLVNLQLYRVALDHPESVSLPCVKIMHLDM 171
>AT1G56400.1 | Symbols: | F-box family protein |
chr1:21111805-21113621 REVERSE
Length = 479
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 7/121 (5%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
+D +S LPD +L ++S L+ K+ ++T +L+++WR+L + S E + +D+
Sbjct: 12 QDRLSNLPDVLLIMIISCLSFKECIRTSVLAKRWRYLCRETRNISFKETEY------VDH 65
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQ 120
S K + +F ++ +++++Y G I + + F + F ++ I FAV V+
Sbjct: 66 FVSDK-RSKRVSFAAYMCQWVSRYHGRYIETLEIYFSIPSDFLAAVESLIEFAVSRQVKN 124
Query: 121 L 121
L
Sbjct: 125 L 125
>AT3G29830.1 | Symbols: | F-box family protein |
chr3:11737049-11738847 FORWARD
Length = 464
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 2 DCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDYT 61
D IS LPD +L +LS L+ KD VKT +LS++WR++ + S E + + DY
Sbjct: 8 DRISSLPDVVLVMILSFLSFKDNVKTSILSKRWRNICYEAKNISFKESEY-VDISVFDYV 66
Query: 62 KSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQL 121
+FV+++ ++++ I SF + F +I I F++ V++L
Sbjct: 67 SKR------VSFVRYMLNWVSRVPIKVIESFEICLGFPVGFEVEIKSLIEFSISRQVKKL 120
>AT5G22720.1 | Symbols: | F-box family protein |
chr5:7549565-7551174 REVERSE
Length = 422
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 33/142 (23%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGL-- 58
ED ISQLPD ++ +L L K AV T +LS++WR L+LS + GL
Sbjct: 22 EDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLS--------------TPGLVL 67
Query: 59 ---DYTKSHKCQQYTCAFVQWVNKFLNQYKGPN--ISSFRVAFCLGPKFAYDIDRWITFA 113
D+T + AFV +V+KFL + + +++ G + RWI F
Sbjct: 68 ISNDFTDYN-------AFVSFVDKFLGFSREQKLCLHKLKLSIRKGENDQDCVTRWIDFV 120
Query: 114 VK-----LGVEQLKIICSCYGI 130
L VE C C+ +
Sbjct: 121 ATPKLKHLDVEIGPTRCECFEV 142
>AT5G53840.1 | Symbols: | F-box family protein (FBL13) |
chr5:21859148-21860672 REVERSE
Length = 444
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 174/448 (38%), Gaps = 101/448 (22%)
Query: 1 EDCISQLPDEILASVLS*LTVKDAVKTRLLSRKWRHLYLSYLHASRSELNFDCKSAGLDY 60
E+ +SQLPD ++ +LS L+ KDAV+T +LS +WR+L+ L+FD
Sbjct: 17 EERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLW-----QLVPVLDFD-------- 63
Query: 61 TKSHKCQQYTCAFVQWVNKFLNQYKGPNISSFRVAFCLGPKFAYDIDRWITFAVKLGVEQ 120
S + + ++ FV + F +K I RV Y + WI + ++
Sbjct: 64 --SRELRSFS-EFVSFAGSFFYLHKDSYIQKLRVCI-YDLAGNYYLTSWIDLVTRHRIQH 119
Query: 121 LKI---ICSCYGISYRKQHELYAFSFQHLSDASELKHLELNSCILKQDFNGQLHSLKFID 177
+ I CS +G+ LY L HL+L+ + L LK +D
Sbjct: 120 IDISVFTCSGFGVI---PLSLYT--------CDTLVHLKLSRVTMVNVEFVSLPCLKILD 168
Query: 178 LIFTPL-DQSILLFILSMCCNLERLRLAWCLCPAVLSFCGPFLQLKMLTVSFCKGLEEIE 236
L F +++ L I+S C P L+ + S ++ I+
Sbjct: 169 LDFVNFTNETTLDKIIS---------------------CSPVLEELTIVKSSEDNVKIIQ 207
Query: 237 LSATNLTTLEVFGDRTNFNIVFSDVPNLQNVLCQKPCTSSF------------------- 277
+ + L +E+ N + D P LQ + + S
Sbjct: 208 VRSQTLKRVEIHRRFDRHNGLVIDTPLLQFLSIKAHSIKSIEFINLGFTTKVDIDVNLLD 267
Query: 278 PDDL-----FKQFENAAPQLQSLKYIPSSIATFGNLKQLE----FIFYSGNEPY----NI 324
P+DL + F +++SL +I + +LE F + S N+
Sbjct: 268 PNDLSNRSMTRDFFTTISRVRSLVIRHGTIKDIFHYMELEPLQQFCYLSELSAVCSISNL 327
Query: 325 WKIIPVLIACPLLQIFNLTIRLGIHLYDAVNIEERTMKEIQKYH------YSRLKEVEI- 377
++ +L +CP L+ +L + V+ E+ +E+ S LK V++
Sbjct: 328 EMLLNLLKSCPKLESLSLKL---------VDYEKNKKEEVMSSTVPPPCLVSSLKFVKLE 378
Query: 378 GGFQGTETQLALALYFLKNAVELERMVI 405
G T+L +A YFL+N+ LE++ +
Sbjct: 379 SQLLGCGTELKVARYFLENSTILEKLTL 406