Jatropha Genome Database
- JcCB0104641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0104641.10 - phase: 1 /partial
(112 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G18270.2 | Symbols: | ketose-bisphosphate aldolase class-II ... 175 4e-45
AT1G18270.1 | Symbols: | ketose-bisphosphate aldolase class-II ... 175 4e-45
AT4G20930.1 | Symbols: | 3-hydroxyisobutyrate dehydrogenase, pu... 62 5e-11
AT1G71170.1 | Symbols: | 6-phosphogluconate dehydrogenase NAD-b... 50 3e-07
AT1G71180.1 | Symbols: | 6-phosphogluconate dehydrogenase NAD-b... 50 4e-07
AT1G17650.1 | Symbols: GLYR2, GR2 | GLYR2 (GLYOXYLATE REDUCTASE ... 46 4e-06
AT3G25530.1 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | GLYR1 (GLYOX... 46 4e-06
AT3G25530.2 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | GLYR1 (GLYOX... 46 4e-06
>AT1G18270.2 | Symbols: | ketose-bisphosphate aldolase class-II
family protein | chr1:6283634-6293772 REVERSE
Length = 1374
Score = 175 bits (444), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 95/107 (88%)
Query: 1 EGKNLKLVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGS 60
EGK+LKLVDAPVSGGVKRA+ G LTIMASG DEAL G VL+ALSEKLYVIKGGCGAGS
Sbjct: 433 EGKDLKLVDAPVSGGVKRAAMGELTIMASGTDEALKSAGLVLSALSEKLYVIKGGCGAGS 492
Query: 61 GVKMVNQLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGTSWF 107
GVKMVNQLLAGVHIASAAEAMAFGARLGLNTR LF+ I NS GTSW
Sbjct: 493 GVKMVNQLLAGVHIASAAEAMAFGARLGLNTRKLFNVISNSGGTSWM 539
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%)
Query: 7 LVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGVKMVN 66
+VDA V G+ DG L I+ASG +++ L A+ + LY +G GAGS VKMVN
Sbjct: 120 VVDAYVLKGMSELLDGKLMIIASGRSDSITRAQPYLTAMCQNLYTFEGEIGAGSKVKMVN 179
Query: 67 QLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGTSWF 107
+LL G+H+ +A EA++ G++ G++ IL+D I N+ G SW
Sbjct: 180 ELLEGIHLVAAVEAISLGSQAGVHPWILYDIISNAAGNSWI 220
>AT1G18270.1 | Symbols: | ketose-bisphosphate aldolase class-II
family protein | chr1:6283634-6293772 REVERSE
Length = 1373
Score = 175 bits (444), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 95/107 (88%)
Query: 1 EGKNLKLVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGS 60
EGK+LKLVDAPVSGGVKRA+ G LTIMASG DEAL G VL+ALSEKLYVIKGGCGAGS
Sbjct: 432 EGKDLKLVDAPVSGGVKRAAMGELTIMASGTDEALKSAGLVLSALSEKLYVIKGGCGAGS 491
Query: 61 GVKMVNQLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGTSWF 107
GVKMVNQLLAGVHIASAAEAMAFGARLGLNTR LF+ I NS GTSW
Sbjct: 492 GVKMVNQLLAGVHIASAAEAMAFGARLGLNTRKLFNVISNSGGTSWM 538
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%)
Query: 7 LVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGVKMVN 66
+VDA V G+ DG L I+ASG +++ L A+ + LY +G GAGS VKMVN
Sbjct: 119 VVDAYVLKGMSELLDGKLMIIASGRSDSITRAQPYLTAMCQNLYTFEGEIGAGSKVKMVN 178
Query: 67 QLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGTSWF 107
+LL G+H+ +A EA++ G++ G++ IL+D I N+ G SW
Sbjct: 179 ELLEGIHLVAAVEAISLGSQAGVHPWILYDIISNAAGNSWI 219
>AT4G20930.1 | Symbols: | 3-hydroxyisobutyrate dehydrogenase,
putative | chr4:11198627-11201036 REVERSE
Length = 347
Score = 62.4 bits (150), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 7 LVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGVKMVN 66
++DAPVSGGV A GTLT M G ++A + +L ++ + + GG G GS K+ N
Sbjct: 164 MLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMG-RTSIYCGGSGNGSAAKICN 222
Query: 67 QLLAGVHIASAAEAMAFGARLGLNTRILFDFIVNSEGTSW 106
L V + +EA+A G LG++ L + + S G W
Sbjct: 223 NLAMAVSMLGTSEALALGQSLGISASTLTEVLNTSSGRCW 262
>AT1G71170.1 | Symbols: | 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein |
chr1:26830673-26831572 FORWARD
Length = 299
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 8 VDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGVKMVNQ 67
VDAPVSGG A +G LTI A GD E + V+ + + GG G+G K+ NQ
Sbjct: 129 VDAPVSGGDAGAREGKLTIFAGGDSEIVEWLAPVMKTMG--IVRFMGGAGSGQSCKIGNQ 186
Query: 68 LLAGVHIASAAEAMAFGARLGLNT 91
+ G ++ AE + F + GL+
Sbjct: 187 ICVGSNMIGLAEGIVFAEKAGLDP 210
>AT1G71180.1 | Symbols: | 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein |
chr1:26832335-26833291 FORWARD
Length = 318
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 3 KNLKLVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSGV 62
+N VDAPVSGG A +GTL I A GD E + V+ + Y+ G G+G
Sbjct: 145 RNCWAVDAPVSGGDAGAREGTLGIFAGGDSEIVEWLSPVMKNIGTVTYM--GEAGSGQSC 202
Query: 63 KMVNQLLAGVHIASAAEAMAFGARLGLNT 91
K+ NQ+ ++ AE + F + GL+T
Sbjct: 203 KIGNQIAGASNLVGLAEGIVFAEKAGLDT 231
>AT1G17650.1 | Symbols: GLYR2, GR2 | GLYR2 (GLYOXYLATE REDUCTASE 2);
glyoxylate reductase (NADP)/ phosphogluconate
dehydrogenase (decarboxylating) | chr1:6069594-6071964
REVERSE
Length = 358
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 7 LVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAAL-SEKLYVIKGGCGAGSGVKMV 65
++APVSG K A DG L + +GD L + K Y+ G G G+ +K+V
Sbjct: 181 FLEAPVSGSKKPAEDGQLIFLTAGDKPLYEKAAPFLDIMGKSKFYL--GEVGNGAAMKLV 238
Query: 66 NQLLAGVHIASAAEAMAFGARLGLNTRILFDFI 98
++ G +AS AE + ++GL+ +L + +
Sbjct: 239 VNMIMGSMMASFAEGILLSQKVGLDPNVLVEVV 271
>AT3G25530.1 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | GLYR1
(GLYOXYLATE REDUCTASE 1); 3-hydroxybutyrate
dehydrogenase/ phosphogluconate dehydrogenase
(decarboxylating) | chr3:9271949-9273514 REVERSE
Length = 289
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 2 GKNLKLVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSG 61
GK + V+ PVSG K A DG L I+A+GD + L ++ + + G G G+
Sbjct: 110 GKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYL-GQVGNGAK 168
Query: 62 VKMVNQLLAGVHIASAAEAMAFGARLGLNTRILFDFI 98
+K++ ++ G + + +E + + GL++ L D +
Sbjct: 169 MKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDIL 205
>AT3G25530.2 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | GLYR1
(GLYOXYLATE REDUCTASE 1); 3-hydroxybutyrate
dehydrogenase/ phosphogluconate dehydrogenase
(decarboxylating) | chr3:9271949-9273514 REVERSE
Length = 278
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 2 GKNLKLVDAPVSGGVKRASDGTLTIMASGDDEALIHTGAVLAALSEKLYVIKGGCGAGSG 61
GK + V+ PVSG K A DG L I+A+GD + L ++ + + G G G+
Sbjct: 99 GKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYL-GQVGNGAK 157
Query: 62 VKMVNQLLAGVHIASAAEAMAFGARLGLNTRILFDFI 98
+K++ ++ G + + +E + + GL++ L D +
Sbjct: 158 MKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDIL 194