Jatropha Genome Database
- JcCB0103641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0103641.10 + phase: 0
(165 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60910.1 | Symbols: AGL8, FUL | AGL8 (agamous-like 8); transc... 99 2e-21
AT5G60910.2 | Symbols: AGL8, FUL | AGL8 (agamous-like 8); transc... 98 2e-21
AT1G69120.1 | Symbols: AP1, AGL7 | AP1 (APETALA1); DNA binding /... 93 8e-20
AT1G26310.1 | Symbols: CAL, CAL1, agl10 | CAL (CAULIFLOWER); DNA... 80 6e-16
AT2G45660.1 | Symbols: AGL20, SOC1 | AGL20 (AGAMOUS-LIKE 20); tr... 57 6e-09
AT3G30260.1 | Symbols: AGL79 | AGL79 (AGAMOUS-LIKE 79); DNA bind... 57 6e-09
AT3G61120.1 | Symbols: AGL13 | AGL13 (AGAMOUS-LIKE 13); DNA bind... 56 9e-09
AT1G24260.2 | Symbols: SEP3, AGL9 | SEP3 (SEPALLATA3); DNA bindi... 56 1e-08
AT1G24260.1 | Symbols: SEP3, AGL9 | SEP3 (SEPALLATA3); DNA bindi... 56 1e-08
AT2G03710.3 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA bind... 54 3e-08
AT2G45650.1 | Symbols: AGL6 | AGL6 (AGAMOUS-LIKE 6); DNA binding... 54 3e-08
AT2G03710.2 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA bind... 54 4e-08
AT2G03710.1 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA bind... 54 4e-08
AT5G15800.2 | Symbols: SEP1, AGL2 | SEP1 (SEPALLATA1); DNA bindi... 53 8e-08
AT5G15800.1 | Symbols: SEP1, AGL2 | SEP1 (SEPALLATA1); DNA bindi... 53 1e-07
AT3G58780.1 | Symbols: SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA b... 52 2e-07
AT3G58780.2 | Symbols: SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA b... 52 2e-07
AT4G22950.1 | Symbols: AGL19, GL19 | AGL19 (AGAMOUS-LIKE 19); tr... 50 4e-07
AT2G42830.2 | Symbols: SHP2, AGL5 | SHP2 (SHATTERPROOF 2); prote... 50 6e-07
AT2G42830.1 | Symbols: SHP2, AGL5 | SHP2 (SHATTERPROOF 2); prote... 49 1e-06
AT3G02310.1 | Symbols: SEP2, AGL4 | SEP2 (SEPALLATA 2); DNA bind... 49 1e-06
AT2G14210.1 | Symbols: ANR1, AGL44 | AGL44 (AGAMOUS-LIKE 44); DN... 47 4e-06
>AT5G60910.1 | Symbols: AGL8, FUL | AGL8 (agamous-like 8);
transcription factor | chr5:24502736-24506013 REVERSE
Length = 242
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
VL +K +FMGEDLDSLSLKELQ+LE Q+D+A+K IRSRKNQ M+ESIS LQKKDKALQ+
Sbjct: 104 VLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQD 163
Query: 83 QNNQLXXXXXXXXXXMAXXXXXXXXXXXAVNSSPVLIPQ 121
NN L NSS VL+PQ
Sbjct: 164 HNNSLLKKIKEREKKTG---QQEGQLVQCSNSSSVLLPQ 199
>AT5G60910.2 | Symbols: AGL8, FUL | AGL8 (agamous-like 8);
transcription factor | chr5:24502736-24504934 REVERSE
Length = 180
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
VL +K +FMGEDLDSLSLKELQ+LE Q+D+A+K IRSRKNQ M+ESIS LQKKDKALQ+
Sbjct: 42 VLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQD 101
Query: 83 QNNQLXXXXXXXXXXMAXXXXXXXXXXXAVNSSPVLIPQ 121
NN L NSS VL+PQ
Sbjct: 102 HNNSLLKKIKEREKKTG---QQEGQLVQCSNSSSVLLPQ 137
>AT1G69120.1 | Symbols: AP1, AGL7 | AP1 (APETALA1); DNA binding /
protein binding / protein heterodimerization/
transcription activator/ transcription factor |
chr1:25982576-25986102 REVERSE
Length = 256
Score = 92.8 bits (229), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 58/65 (89%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
+L ++ H++GEDL ++S KELQNLEQQ+D+ALKHIR+RKNQ MYESI+ELQKK+KA+QE
Sbjct: 104 LLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQE 163
Query: 83 QNNQL 87
QN+ L
Sbjct: 164 QNSML 168
>AT1G26310.1 | Symbols: CAL, CAL1, agl10 | CAL (CAULIFLOWER); DNA
binding / transcription factor | chr1:9100330-9103510
REVERSE
Length = 255
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 56/65 (86%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
+L ++ H++GE+L+ +SLK+LQNLEQQ+++ALKHIRSRKNQ M ES++ LQ+K+K +QE
Sbjct: 106 LLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQE 165
Query: 83 QNNQL 87
+N+ L
Sbjct: 166 ENSML 170
>AT2G45660.1 | Symbols: AGL20, SOC1 | AGL20 (AGAMOUS-LIKE 20);
transcription factor | chr2:18807799-18810193 REVERSE
Length = 214
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 24 LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
L SK +GE + + S++ELQ +EQQ++ ++K IR+RK Q E I +L++K+KAL +
Sbjct: 104 LEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAE 163
Query: 84 NNQL 87
N +L
Sbjct: 164 NEKL 167
>AT3G30260.1 | Symbols: AGL79 | AGL79 (AGAMOUS-LIKE 79); DNA binding
/ transcription factor | chr3:11909119-11912880 FORWARD
Length = 249
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISEL 73
VL S H GE++D LS+++LQ +E Q+D+ALK RSRKNQ M ESI++L
Sbjct: 104 VLQRSLRHLRGEEVDGLSIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQL 154
>AT3G61120.1 | Symbols: AGL13 | AGL13 (AGAMOUS-LIKE 13); DNA binding
/ transcription factor | chr3:22618414-22620466 REVERSE
Length = 244
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 28 KTH--FMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQNN 85
+TH +GEDL+ +S+KELQ LE+Q++ AL R +K Q M E + EL++K++ L + NN
Sbjct: 104 RTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINN 163
Query: 86 QL 87
+L
Sbjct: 164 KL 165
>AT1G24260.2 | Symbols: SEP3, AGL9 | SEP3 (SEPALLATA3); DNA binding
/ protein binding / transcription factor |
chr1:8593790-8595862 REVERSE
Length = 251
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
L ++ + +GEDL LS KEL++LE+Q+DS+LK IR+ + Q M + +++LQ K++ L E
Sbjct: 107 ALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTE 166
Query: 83 QNNQL 87
N L
Sbjct: 167 TNKTL 171
>AT1G24260.1 | Symbols: SEP3, AGL9 | SEP3 (SEPALLATA3); DNA binding
/ protein binding / transcription factor |
chr1:8593790-8595862 REVERSE
Length = 250
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
L ++ + +GEDL LS KEL++LE+Q+DS+LK IR+ + Q M + +++LQ K++ L E
Sbjct: 106 ALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTE 165
Query: 83 QNNQL 87
N L
Sbjct: 166 TNKTL 170
>AT2G03710.3 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA binding
/ transcription factor | chr2:1129622-1131242 FORWARD
Length = 187
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
+L S+ H +GE+L + + EL++LE+Q+D++L+ IRS K + M + +S+L+ K++ L E
Sbjct: 104 ILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLE 163
Query: 83 QNNQL 87
N L
Sbjct: 164 TNRDL 168
>AT2G45650.1 | Symbols: AGL6 | AGL6 (AGAMOUS-LIKE 6); DNA binding /
transcription factor | chr2:18804453-18806291 FORWARD
Length = 252
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 20 FRTVLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKA 79
+ +++ T++ + +GEDL + +KELQ LE+Q+++AL R RK Q M E + +L+KK++
Sbjct: 100 YESLVRTNR-NLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQ 158
Query: 80 LQEQNNQL 87
L + N QL
Sbjct: 159 LGDINKQL 166
>AT2G03710.2 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA binding
/ transcription factor | chr2:1129622-1131628 FORWARD
Length = 257
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
+L S+ H +GE+L + + EL++LE+Q+D++L+ IRS K + M + +S+L+ K++ L E
Sbjct: 104 ILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLE 163
Query: 83 QNNQL 87
N L
Sbjct: 164 TNRDL 168
>AT2G03710.1 | Symbols: SEP4, AGL3 | SEP4 (SEPALLATA 4); DNA binding
/ transcription factor | chr2:1129622-1131628 FORWARD
Length = 258
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
+L S+ H +GE+L + + EL++LE+Q+D++L+ IRS K + M + +S+L+ K++ L E
Sbjct: 104 ILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLE 163
Query: 83 QNNQL 87
N L
Sbjct: 164 TNRDL 168
>AT5G15800.2 | Symbols: SEP1, AGL2 | SEP1 (SEPALLATA1); DNA binding
/ transcription factor | chr5:5151594-5153767 REVERSE
Length = 262
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 24 LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
L + + +GEDL L+ KEL+ LE+Q+D +LK +RS K Q M + +S+LQ K++ L E
Sbjct: 105 LQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLET 164
Query: 84 NNQL 87
N L
Sbjct: 165 NRAL 168
>AT5G15800.1 | Symbols: SEP1, AGL2 | SEP1 (SEPALLATA1); DNA binding
/ transcription factor | chr5:5151594-5153767 REVERSE
Length = 251
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 24 LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
L + + +GEDL L+ KEL+ LE+Q+D +LK +RS K Q M + +S+LQ K++ L E
Sbjct: 105 LQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLET 164
Query: 84 NNQL 87
N L
Sbjct: 165 NRAL 168
>AT3G58780.1 | Symbols: SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA
binding / protein binding / transcription factor |
chr3:21739150-21741766 FORWARD
Length = 248
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 18 RHFRTVLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKD 77
R R + N+++ H +GE L SL+ KEL+NLE +++ + +RS+KN+ + I +QK++
Sbjct: 114 RQIRDIQNSNR-HIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKRE 172
Query: 78 KALQEQN 84
LQ N
Sbjct: 173 MELQHNN 179
>AT3G58780.2 | Symbols: SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA
binding / protein binding / transcription factor |
chr3:21739150-21741766 FORWARD
Length = 241
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 18 RHFRTVLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKD 77
R R + N+++ H +GE L SL+ KEL+NLE +++ + +RS+KN+ + I +QK++
Sbjct: 107 RQIRDIQNSNR-HIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKRE 165
Query: 78 KALQEQN 84
LQ N
Sbjct: 166 MELQHNN 172
>AT4G22950.1 | Symbols: AGL19, GL19 | AGL19 (AGAMOUS-LIKE 19);
transcription factor | chr4:12023946-12027421 REVERSE
Length = 219
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 24 LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
L SK +GE +D+ S++ELQ LE Q+D +L IR++K Q + E I +L+ +++ L ++
Sbjct: 103 LEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKE 162
Query: 84 NNQL 87
N L
Sbjct: 163 NKDL 166
>AT2G42830.2 | Symbols: SHP2, AGL5 | SHP2 (SHATTERPROOF 2); protein
binding / transcription factor | chr2:17820602-17823806
FORWARD
Length = 248
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 18 RHFRTVLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKD 77
R R + N ++ H +GE L SL+ KEL+NLE +++ + +RS+K++ + I +QK+
Sbjct: 114 RQIRDIQNLNR-HILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRV 172
Query: 78 KALQEQNNQL 87
K ++ QN+ +
Sbjct: 173 KEIELQNDNM 182
>AT2G42830.1 | Symbols: SHP2, AGL5 | SHP2 (SHATTERPROOF 2); protein
binding / transcription factor | chr2:17820602-17823806
FORWARD
Length = 246
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 18 RHFRTVLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKD 77
R R + N ++ H +GE L SL+ KEL+NLE +++ + +RS+K++ + I +QK++
Sbjct: 114 RQIRDIQNLNR-HILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRE 172
Query: 78 KALQEQN 84
LQ N
Sbjct: 173 IELQNDN 179
>AT3G02310.1 | Symbols: SEP2, AGL4 | SEP2 (SEPALLATA 2); DNA binding
/ protein binding / transcription factor |
chr3:464554-466687 REVERSE
Length = 250
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 24 LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
L + + +GEDL L+ KEL+ LE+Q+D +LK +R K Q M + +S+LQ K+ L +
Sbjct: 105 LQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDA 164
Query: 84 NNQL 87
N L
Sbjct: 165 NRAL 168
>AT2G14210.1 | Symbols: ANR1, AGL44 | AGL44 (AGAMOUS-LIKE 44); DNA
binding / transcription factor | chr2:6018841-6023585
FORWARD
Length = 234
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 40/57 (70%)
Query: 31 FMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQNNQL 87
+GE+L ++ +LQNLE Q+ ++LK +R +K+Q M I EL +K + +Q++N++L
Sbjct: 111 LVGEELSGMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHEL 167