Jatropha Genome Database
- JcCB0103411.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0103411.10 + phase: 0 /partial
(323 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23670.2 | Symbols: LCB2 | LCB2; protein binding / serine C-p... 602 e-172
AT5G23670.1 | Symbols: LCB2 | LCB2; protein binding / serine C-p... 602 e-172
AT3G48780.1 | Symbols: ATSPT1, SPT1 | SPT1 (SERINE PALMITOYLTRAN... 588 e-168
AT3G48790.1 | Symbols: | serine C-palmitoyltransferase, putativ... 311 4e-85
AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1 (LO... 111 7e-25
AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1 (LO... 111 7e-25
AT5G04620.2 | Symbols: ATBIOF | ATBIOF (BIOTIN F); 8-amino-7-oxo... 83 3e-16
AT5G04620.1 | Symbols: ATBIOF | ATBIOF (BIOTIN F); 8-amino-7-oxo... 78 6e-15
>AT5G23670.2 | Symbols: LCB2 | LCB2; protein binding / serine
C-palmitoyltransferase | chr5:7981889-7985037 FORWARD
Length = 489
Score = 602 bits (1551), Expect = e-172, Method: Compositional matrix adjust.
Identities = 277/323 (85%), Positives = 303/323 (93%)
Query: 1 MIAIPYLTALTTYFSYGLLFAFGQIRDFFRKIIDWWSSNNLQGYAPICLGLEDFYIRRLY 60
MI IPYLTA++TYFSYGLLFAFGQ+RDFFR+ IDWW ++NLQGYAPICLG EDFYIRRLY
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFTSNLQGYAPICLGHEDFYIRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLIRTSNVKRCLNLGSYNYLGFAAADEYC 120
RIQDCF RPI+SAPDAWFDVVERYSNDNNKTL RT+ RCLNLGSYNYLGF + DEYC
Sbjct: 61 HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120
Query: 121 TPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPV 180
TPRVIESLKK+S STCSSRVDAGTT++H ELE+CV FVGKPAA+VFGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV 180
Query: 181 LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWK 240
LIGKGGLIISDSLNH+SIVNGARGSGATIRVFQHNTPSHLE VLREQIA+GQPRTHRPWK
Sbjct: 181 LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTA 300
KIIV+VEGIYSMEGE+C LPE++AICKKYKAY YLDEAHSIGA+GK+G+G+CELLGVDTA
Sbjct: 241 KIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDTA 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAGS 323
DVD+MMGTFTKSFGSCGGYIAGS
Sbjct: 301 DVDVMMGTFTKSFGSCGGYIAGS 323
>AT5G23670.1 | Symbols: LCB2 | LCB2; protein binding / serine
C-palmitoyltransferase | chr5:7981889-7985037 FORWARD
Length = 489
Score = 602 bits (1551), Expect = e-172, Method: Compositional matrix adjust.
Identities = 277/323 (85%), Positives = 303/323 (93%)
Query: 1 MIAIPYLTALTTYFSYGLLFAFGQIRDFFRKIIDWWSSNNLQGYAPICLGLEDFYIRRLY 60
MI IPYLTA++TYFSYGLLFAFGQ+RDFFR+ IDWW ++NLQGYAPICLG EDFYIRRLY
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFTSNLQGYAPICLGHEDFYIRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLIRTSNVKRCLNLGSYNYLGFAAADEYC 120
RIQDCF RPI+SAPDAWFDVVERYSNDNNKTL RT+ RCLNLGSYNYLGF + DEYC
Sbjct: 61 HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120
Query: 121 TPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPV 180
TPRVIESLKK+S STCSSRVDAGTT++H ELE+CV FVGKPAA+VFGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV 180
Query: 181 LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWK 240
LIGKGGLIISDSLNH+SIVNGARGSGATIRVFQHNTPSHLE VLREQIA+GQPRTHRPWK
Sbjct: 181 LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTA 300
KIIV+VEGIYSMEGE+C LPE++AICKKYKAY YLDEAHSIGA+GK+G+G+CELLGVDTA
Sbjct: 241 KIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDTA 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAGS 323
DVD+MMGTFTKSFGSCGGYIAGS
Sbjct: 301 DVDVMMGTFTKSFGSCGGYIAGS 323
>AT3G48780.1 | Symbols: ATSPT1, SPT1 | SPT1 (SERINE
PALMITOYLTRANSFERASE 1); serine C-palmitoyltransferase |
chr3:18089346-18092276 FORWARD
Length = 489
Score = 588 bits (1515), Expect = e-168, Method: Compositional matrix adjust.
Identities = 271/323 (83%), Positives = 298/323 (92%)
Query: 1 MIAIPYLTALTTYFSYGLLFAFGQIRDFFRKIIDWWSSNNLQGYAPICLGLEDFYIRRLY 60
MI IPYLTA++TYFSYGLLFAFGQ+RD+ R I DWW +NNLQGYAPICL EDFYIRRLY
Sbjct: 1 MITIPYLTAVSTYFSYGLLFAFGQLRDYSRLIFDWWRTNNLQGYAPICLAHEDFYIRRLY 60
Query: 61 LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLIRTSNVKRCLNLGSYNYLGFAAADEYC 120
RIQDCFGRPI+SAPDAW DVVER S+DNNKTL RT+ RCLNLGSYNYLGF + DEYC
Sbjct: 61 HRIQDCFGRPISSAPDAWIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120
Query: 121 TPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPV 180
TPRVIESLKK+S STCSSRVDAGTT++H ELE CVA +VG+PAA++FGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEDCVAKYVGQPAAVIFGMGYATNSAIIPV 180
Query: 181 LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWK 240
LIGKGGLIISDSLNH SIVNGARGSGATIRVFQHNTP HLE+VL+EQIA+GQPRTHRPWK
Sbjct: 181 LIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPGHLEKVLKEQIAEGQPRTHRPWK 240
Query: 241 KIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTA 300
KIIV+VEGIYSMEGE+C LPEI++ICKKYKAY YLDEAHSIGA+GK+GRGVCELLGVDT+
Sbjct: 241 KIIVVVEGIYSMEGEICHLPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTS 300
Query: 301 DVDIMMGTFTKSFGSCGGYIAGS 323
DVDIMMGTFTKSFGSCGGYIAGS
Sbjct: 301 DVDIMMGTFTKSFGSCGGYIAGS 323
>AT3G48790.1 | Symbols: | serine C-palmitoyltransferase, putative |
chr3:18093404-18095181 FORWARD
Length = 350
Score = 311 bits (796), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 145/182 (79%), Positives = 164/182 (90%), Gaps = 7/182 (3%)
Query: 142 AGTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNG 201
+GTTA+H ELE+CVA FVGKPAA+VFGMGY+TNSAI+ VLIGKGGLIISDSLNH SI+NG
Sbjct: 6 SGTTAVHGELEECVAKFVGKPAAVVFGMGYLTNSAIISVLIGKGGLIISDSLNHTSIING 65
Query: 202 ARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPE 261
ARGSGATIRVFQHN +L+E I +GQPRTHRPWKKIIV+VEGIYSMEGE+C LPE
Sbjct: 66 ARGSGATIRVFQHN-------ILKEHIIEGQPRTHRPWKKIIVVVEGIYSMEGEICDLPE 118
Query: 262 IIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIA 321
I+++C +YKAY YLDEAHSIGA+GK+GRGVCELLGVDT +VDIMMGTFTKS GSCGGYIA
Sbjct: 119 IVSVCSEYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTTEVDIMMGTFTKSLGSCGGYIA 178
Query: 322 GS 323
GS
Sbjct: 179 GS 180
>AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1
(LONG-CHAIN BASE1); protein binding / serine
C-palmitoyltransferase | chr4:17218598-17221124 FORWARD
Length = 482
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 10/231 (4%)
Query: 96 TSNVKRCLNLGSYNYLGFAAAD---EYCTPRVIESLKKYSPSTCSSRVDAGTTALHNELE 152
T N K +N S NYLG + E CT +L+KY +C R GT +H + E
Sbjct: 105 TVNGKDVVNFASANYLGLIGHEKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLDCE 160
Query: 153 KCVADFVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNGARGSGATIRVF 212
++ F+G P +I++ G T + +P KG +I++D H I NG + S +TI F
Sbjct: 161 TRISKFLGTPDSILYSYGLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIVYF 220
Query: 213 QHNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAY 272
+HN L L E+I R+ + I + E +Y G++ L EI+ + +KY+
Sbjct: 221 KHNDMESLRITL-EKIMTKYKRSKNLRRYI--VAEAVYQNSGQIAPLDEIVKLKEKYRFR 277
Query: 273 TYLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
LDE++S G +G+SGRG+ E V +D++ + + GG+ G+
Sbjct: 278 VILDESNSFGVLGRSGRGLAEHHSVPIEKIDVVTAAMGHALATEGGFCTGN 328
>AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1
(LONG-CHAIN BASE1); protein binding / serine
C-palmitoyltransferase | chr4:17218598-17221124 FORWARD
Length = 482
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 10/231 (4%)
Query: 96 TSNVKRCLNLGSYNYLGFAAAD---EYCTPRVIESLKKYSPSTCSSRVDAGTTALHNELE 152
T N K +N S NYLG + E CT +L+KY +C R GT +H + E
Sbjct: 105 TVNGKDVVNFASANYLGLIGHEKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLDCE 160
Query: 153 KCVADFVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNGARGSGATIRVF 212
++ F+G P +I++ G T + +P KG +I++D H I NG + S +TI F
Sbjct: 161 TRISKFLGTPDSILYSYGLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIVYF 220
Query: 213 QHNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAY 272
+HN L L E+I R+ + I + E +Y G++ L EI+ + +KY+
Sbjct: 221 KHNDMESLRITL-EKIMTKYKRSKNLRRYI--VAEAVYQNSGQIAPLDEIVKLKEKYRFR 277
Query: 273 TYLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
LDE++S G +G+SGRG+ E V +D++ + + GG+ G+
Sbjct: 278 VILDESNSFGVLGRSGRGLAEHHSVPIEKIDVVTAAMGHALATEGGFCTGN 328
>AT5G04620.2 | Symbols: ATBIOF | ATBIOF (BIOTIN F);
8-amino-7-oxononanoate synthase/ transaminase |
chr5:1327292-1329934 FORWARD
Length = 476
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 30/247 (12%)
Query: 95 RTSNVKRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSPSTCSSRVDAGTTALHNELEKC 154
R K+ L +YLG ++ ++K+Y S + G T H LE
Sbjct: 97 RKGRFKKLLLFSGNDYLGLSSHPTISNA-AANAVKEYGMGPKGSALICGYTTYHRLLESS 155
Query: 155 VADFVGKPAAIVFGMGYVTNSAILPVLIGKGGL--------------IISDSLNHNSIVN 200
+A K +V G+ N A + + L I SD+LNH SI++
Sbjct: 156 LAQLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID 215
Query: 201 GAR----GSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGEL 256
G R + V++H HL +L ++ K+ +V+ + ++SM+G+
Sbjct: 216 GVRLAERQGNVEVFVYRHCDMYHLNSLL----------SNCKMKRKVVVTDSLFSMDGDF 265
Query: 257 CKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSC 316
+ E+ + KKY +D+AH G++G GV E + ADVD+ +GT +K+ G
Sbjct: 266 APMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCH 324
Query: 317 GGYIAGS 323
GG+IA S
Sbjct: 325 GGFIACS 331
>AT5G04620.1 | Symbols: ATBIOF | ATBIOF (BIOTIN F);
8-amino-7-oxononanoate synthase/ transaminase |
chr5:1328004-1329934 FORWARD
Length = 343
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 29/199 (14%)
Query: 143 GTTALHNELEKCVADFVGKPAAIVFGMGYVTNSAILPVLIGKGGL--------------I 188
G T H LE +A K +V G+ N A + + L I
Sbjct: 11 GYTTYHRLLESSLAQLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAI 70
Query: 189 ISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWKKIIV 244
SD+LNH SI++G R + V++H HL +L ++ K+ +V
Sbjct: 71 FSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLL----------SNCKMKRKVV 120
Query: 245 IVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTADVDI 304
+ + ++SM+G+ + E+ + KKY +D+AH G++G GV E + ADVD+
Sbjct: 121 VTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDL 179
Query: 305 MMGTFTKSFGSCGGYIAGS 323
+GT +K+ G GG+IA S
Sbjct: 180 CVGTLSKAAGCHGGFIACS 198