Jatropha Genome Database

JcCB0101161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0101161.10 - phase: 0 /partial
         (242 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G72520.1 | Symbols:  | lipoxygenase, putative | chr1:27308611...   289   1e-78
AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion b...   287   4e-78
AT1G67560.1 | Symbols:  | lipoxygenase family protein | chr1:253...   114   8e-26
AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion b...   103   1e-22
AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase | chr1:20525798...   100   8e-22
AT3G45140.1 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lip...    88   6e-18

>AT1G72520.1 | Symbols:  | lipoxygenase, putative |
           chr1:27308611-27312589 FORWARD
          Length = 926

 Score =  289 bits (739), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 157/249 (63%), Positives = 179/249 (71%), Gaps = 8/249 (3%)

Query: 1   MALAKEIMGSSL-FDKSLSISTSKVFLNHSFHQKXXXXXXXXXXXXXXRMVKRVVRAPVA 59
           MALA EIMGS L F++S S++ S      S  +K               M        VA
Sbjct: 1   MALANEIMGSRLIFERSSSLA-SPFHSRFSIKKKTQRTQFSINPFDPRPMRAVNSSGVVA 59

Query: 60  AISEDLIKASNTNT------NNILPEKAVKFKVRAVITVRNKHKEDLKETIAKKWDAFMD 113
           AISEDL+K    +T           EK+VKFKVRAV TVRNK+KED KET+ K  DAF D
Sbjct: 60  AISEDLVKTLRISTVGRKQEKEEEEEKSVKFKVRAVATVRNKNKEDFKETLVKHLDAFTD 119

Query: 114 KLGRNVVLELISNEVDPKTNAPKKSKEAVLNDWSKKSNFKAERVHYTADFIVDSHFGIPG 173
           K+GRNVVLEL+S +VDPKTN PKKSK AVL DWSKKSN KAERVHYTA+F VDS FG PG
Sbjct: 120 KIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYTAEFTVDSAFGSPG 179

Query: 174 AITVSNKHQNEFFLETITLEGFARGPVHFPCNSWVQAKKDHPGKRIFFSNEPYLPSETPA 233
           AITV+NKHQ EFFLE+IT+EGFA GPVHFPCNSWVQ++KDHP KRI F+N+PYLPSETP+
Sbjct: 180 AITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPS 239

Query: 234 GLRALREKE 242
           GLR LREKE
Sbjct: 240 GLRTLREKE 248


>AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion
           binding / lipoxygenase/ metal ion binding /
           oxidoreductase, acting on single donors with
           incorporation of molecular oxygen, incorporation of two
           atoms of oxygen | chr1:5977512-5981384 FORWARD
          Length = 919

 Score =  287 bits (735), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 151/248 (60%), Positives = 179/248 (72%), Gaps = 12/248 (4%)

Query: 1   MALAKEIMGSSLFDKSLSISTSKVFLNHSFHQKXXXXXXXXXXXXXXRMVKRVVRAPVAA 60
           MALAKE+MG  L  +  S+ +S      + H K              R  ++     VAA
Sbjct: 1   MALAKELMGYPLITERSSLVSS------ASHFKKRTQSTQFSINPFDRRPRKTKSGVVAA 54

Query: 61  ISEDLIKAS--NTNTNNILPEK----AVKFKVRAVITVRNKHKEDLKETIAKKWDAFMDK 114
           ISEDL+K    +T T +   E+    AVKFKVRAV+TVRNK+KEDLKET+ K  DAF DK
Sbjct: 55  ISEDLVKTLRFSTTTGDRKSEEEEKAAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFADK 114

Query: 115 LGRNVVLELISNEVDPKTNAPKKSKEAVLNDWSKKSNFKAERVHYTADFIVDSHFGIPGA 174
           +GRN+VLELIS ++DPKT  PKKS  AVL DWSKKS  KAERVHYTA+F VD+ FG PGA
Sbjct: 115 IGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGA 174

Query: 175 ITVSNKHQNEFFLETITLEGFARGPVHFPCNSWVQAKKDHPGKRIFFSNEPYLPSETPAG 234
           ITV NKHQ EFFLE+IT+EGFA GPVHFPCNSWVQ++KDHP KRIFF+N+PYLP+ETP+G
Sbjct: 175 ITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSG 234

Query: 235 LRALREKE 242
           LR LREKE
Sbjct: 235 LRVLREKE 242


>AT1G67560.1 | Symbols:  | lipoxygenase family protein |
           chr1:25319926-25324117 FORWARD
          Length = 917

 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 9/202 (4%)

Query: 48  RMVKRVV-RAPVAAISEDLIKASNTNTNNI--LPEKAVKFK----VRAVITVRNKHKEDL 100
           R V+ V+ R   A   ED  K++N    N    P +  K+     V AV+ +R K KE L
Sbjct: 37  RQVRAVISREEKAVDQEDGKKSTNKPLINSSQFPWQRSKYTGSKTVTAVVKIRKKIKEKL 96

Query: 101 KETIAKKWDAFMDKLGRNVVLELISNEVDPKTNAPKKSKEAVLNDWSKKSNFKAERVHYT 160
            E    + + FM  +G+ ++++L+S E+DP+T   +KS E+ +    K        + +T
Sbjct: 97  TERFEHQLELFMKAIGQGMLIQLVSEEIDPETGKGRKSLESPVMGLPKAVK-DPRYLVFT 155

Query: 161 ADFIVDSHFGIPGAITVSNKHQNEFFLETITLEGFARGPVHFPCNSWVQAKKDHPGKRIF 220
           ADF V  +FG PGAI V+N    E  L  I +E  +   + FP N+W+ +K D+P  RI 
Sbjct: 156 ADFTVPINFGKPGAILVTNLLSTEICLSEIIIED-STDTILFPANTWIHSKNDNPQARII 214

Query: 221 FSNEPYLPSETPAGLRALREKE 242
           F ++P LPSETP G++ LREK+
Sbjct: 215 FRSQPCLPSETPDGIKELREKD 236


>AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion
           binding / lipoxygenase/ metal ion binding /
           oxidoreductase, acting on single donors with
           incorporation of molecular oxygen, incorporation of two
           atoms of oxygen | chr3:7927011-7931167 FORWARD
          Length = 886

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 9/172 (5%)

Query: 80  KAVKFKVRAVITVRNKHKEDLKETIAKKWDAFMDKLGRNVVLELISN-EVDPKTNAPKK- 137
           K    K+   + V  K+  D K+ +A   D   + LGR V L LIS+ + DP      + 
Sbjct: 29  KTTTMKIEGEVVVMKKNLLDFKDVMASLLDRVNELLGRRVSLHLISSHQPDPANEKRGRL 88

Query: 138 SKEAVLNDWSKK--SNFKAERVHYTADFIVDSHFGIPGAITVSNKHQNEFFLETITLEGF 195
            K A L  W  K  ++  AE   +   F  D   G P A  + N H ++F+L+++TL GF
Sbjct: 89  GKAAHLEKWVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGF 148

Query: 196 ARG-----PVHFPCNSWVQAKKDHPGKRIFFSNEPYLPSETPAGLRALREKE 242
             G      +HF CNSW+     +   R+FFSN+ YLPSETP  ++ LRE+E
Sbjct: 149 PDGEGGATAIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEE 200


>AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase |
           chr1:20525798-20530143 FORWARD
          Length = 859

 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 85/162 (52%), Gaps = 4/162 (2%)

Query: 85  KVRAVITVRNKHKEDLKETIAKKWDAFMDKLGRNVVLELISNEVDPKTNAPKK--SKEAV 142
           KV+  + +  K+  D  +  A   D   + LG  + L L+S++V    N  K    K A 
Sbjct: 20  KVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKAAH 79

Query: 143 LNDW-SKKSNFKAERVHYTADFIVDSHFGIPGAITVSNKHQNEFFLETITLEGF-ARGPV 200
           L DW +  ++  A    +   F  ++ FG PGA  + N H +EF L+++TLE     G V
Sbjct: 80  LEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRV 139

Query: 201 HFPCNSWVQAKKDHPGKRIFFSNEPYLPSETPAGLRALREKE 242
           H+ CNSW+   K +   R+FFSN+ YLP ETPA L   RE+E
Sbjct: 140 HYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEE 181


>AT3G45140.1 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2);
           lipoxygenase | chr3:16525437-16529233 FORWARD
          Length = 896

 Score = 87.8 bits (216), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 12/176 (6%)

Query: 67  KASNTNTNNILPEKAVKFKVRAVITVRNKHKEDLKETIAKKWDAFMDKLGRNVVLELISN 126
           +A+     N + E     KV+  IT + +  E +  T ++  D   D  GR++++ELIS 
Sbjct: 56  RANIEQEGNTVKEPIQNIKVKGYITAQEEFLEGI--TWSRGLDDIADIRGRSLLVELISA 113

Query: 127 EVDPKTNAPKKSKEAVLNDWSKKSNFKAERVHYTADFIVDSHFGIPGAITVSNKHQNEFF 186
           + D +           + D++++   +A    Y  +F +   FG  GAI + N++  + F
Sbjct: 114 KTDQRIT---------VEDYAQRVWAEAPDEKYECEFEMPEDFGPVGAIKIQNQYHRQLF 164

Query: 187 LETITLEGFARGPVHFPCNSWVQAKKDHPGKRIFFSNEPYLPSETPAGLRALREKE 242
           L+ + L+    G + F C SWV  K   P KRIFFS++ YLPS+TP  L+  R++E
Sbjct: 165 LKGVELK-LPGGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEE 219