Jatropha Genome Database

JcCB0101051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0101051.10 + phase: 2 /partial
         (161 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02230.1 | Symbols: RGP1, ATRGP1 | RGP1 (REVERSIBLY GLYCOSYLA...   290   4e-79
AT3G08900.1 | Symbols: RGP3, RGP | RGP3 (REVERSIBLY GLYCOSYLATED...   286   4e-78
AT5G15650.1 | Symbols: RGP2, ATRGP2 | RGP2 (REVERSIBLY GLYCOSYLA...   285   7e-78
AT5G50750.1 | Symbols: RGP4 | RGP4 (REVERSIBLY GLYCOSYLATED POLY...   268   9e-73
AT5G16510.2 | Symbols:  | reversibly glycosylated polypeptide, p...   154   2e-38
AT5G16510.1 | Symbols:  | reversibly glycosylated polypeptide, p...   154   2e-38

>AT3G02230.1 | Symbols: RGP1, ATRGP1 | RGP1 (REVERSIBLY GLYCOSYLATED
           POLYPEPTIDE 1); cellulose synthase (UDP-forming) |
           chr3:415463-417304 FORWARD
          Length = 357

 Score =  290 bits (741), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 136/159 (85%), Positives = 143/159 (89%)

Query: 3   RYVDVVLTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCAKVIC 62
           RYVD V+TIPKGTLFPMCGMNLAF+RELIGPAMYFGLMGDGQPIGRYDDMWAGWC KVIC
Sbjct: 198 RYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVIC 257

Query: 63  DHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVVLPKECTNVVKCYI 122
           DHLGLGVKTGLPYI+HSKASNPFVNLKKEYKGI+WQEDIIPFFQS  L KE   V +CY+
Sbjct: 258 DHLGLGVKTGLPYIYHSKASNPFVNLKKEYKGIFWQEDIIPFFQSAKLTKEAVTVQQCYM 317

Query: 123 ELSKLVKEKLGTIDPYFHKLGDAMVTWIEAWVELNSPAQ 161
           ELSKLVKEKL  IDPYF KL DAMVTWIEAW ELN P +
Sbjct: 318 ELSKLVKEKLSPIDPYFDKLADAMVTWIEAWDELNPPTK 356


>AT3G08900.1 | Symbols: RGP3, RGP | RGP3 (REVERSIBLY GLYCOSYLATED
           POLYPEPTIDE 3); transferase, transferring hexosyl groups
           | chr3:2708347-2709714 REVERSE
          Length = 362

 Score =  286 bits (732), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 131/156 (83%), Positives = 142/156 (91%)

Query: 3   RYVDVVLTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCAKVIC 62
           RYVD V+TIPKGTLFPMCGMNLAF+RELIGPAMYFGLMGDGQPIGRYDDMWAGWC KVIC
Sbjct: 194 RYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVIC 253

Query: 63  DHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVVLPKECTNVVKCYI 122
           DH+G GVKTGLPYIWHSKASNPFVNLKKEY GI+WQE+ IPFFQSV LPKECT+V +CY+
Sbjct: 254 DHMGWGVKTGLPYIWHSKASNPFVNLKKEYNGIFWQEEAIPFFQSVTLPKECTSVQQCYL 313

Query: 123 ELSKLVKEKLGTIDPYFHKLGDAMVTWIEAWVELNS 158
           EL+KLV+EKLG +DPYF  L   MVTWIEAW ELNS
Sbjct: 314 ELAKLVREKLGKVDPYFITLATGMVTWIEAWEELNS 349


>AT5G15650.1 | Symbols: RGP2, ATRGP2 | RGP2 (REVERSIBLY GLYCOSYLATED
           POLYPEPTIDE 2); transferase, transferring hexosyl groups
           | chr5:5092203-5094093 FORWARD
          Length = 360

 Score =  285 bits (730), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 132/158 (83%), Positives = 143/158 (90%)

Query: 3   RYVDVVLTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCAKVIC 62
           RYVD V+TIPKGTLFPMCGMNLAF+R+LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVIC
Sbjct: 198 RYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVIC 257

Query: 63  DHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVVLPKECTNVVKCYI 122
           DHL LGVKTGLPYI+HSKASNPFVNLKKEYKGI+WQE+IIPFFQ+  L KE   V +CYI
Sbjct: 258 DHLSLGVKTGLPYIYHSKASNPFVNLKKEYKGIFWQEEIIPFFQNAKLSKEAVTVQQCYI 317

Query: 123 ELSKLVKEKLGTIDPYFHKLGDAMVTWIEAWVELNSPA 160
           ELSK+VKEKL ++DPYF KL DAMVTWIEAW ELN PA
Sbjct: 318 ELSKMVKEKLSSLDPYFDKLADAMVTWIEAWDELNPPA 355


>AT5G50750.1 | Symbols: RGP4 | RGP4 (REVERSIBLY GLYCOSYLATED
           POLYPEPTIDE 4); transferase, transferring hexosyl groups
           | chr5:20641066-20642470 FORWARD
          Length = 364

 Score =  268 bits (686), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 118/159 (74%), Positives = 136/159 (85%)

Query: 3   RYVDVVLTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCAKVIC 62
           RYVD V+TIPK  L+PMCGMNLAFNREL+GPAMYFGLMG+GQPI RYDDMWAGW AKV+C
Sbjct: 194 RYVDAVMTIPKRVLYPMCGMNLAFNRELVGPAMYFGLMGEGQPISRYDDMWAGWAAKVVC 253

Query: 63  DHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVVLPKECTNVVKCYI 122
           DHLG GVKTGLPY+WHSKASNPFVNLKKE+KG++WQED++PFFQ++ L KE     KCY+
Sbjct: 254 DHLGFGVKTGLPYLWHSKASNPFVNLKKEHKGLHWQEDMVPFFQNLRLSKESDTAAKCYM 313

Query: 123 ELSKLVKEKLGTIDPYFHKLGDAMVTWIEAWVELNSPAQ 161
           E+S + KEKL  +DPYF KL DAMV WIEAW ELN P +
Sbjct: 314 EISNMTKEKLTKVDPYFEKLADAMVVWIEAWEELNPPVK 352


>AT5G16510.2 | Symbols:  | reversibly glycosylated polypeptide,
           putative | chr5:5393296-5394342 FORWARD
          Length = 348

 Score =  154 bits (389), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 3/160 (1%)

Query: 4   YVDVVLTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYD---DMWAGWCAKV 60
           YVD V+T+P   + P+ G+N+AFNREL+GPA+   L   G+   R++   D+W G C K 
Sbjct: 189 YVDAVMTVPAKAMLPISGINIAFNRELVGPALVPALRLAGEGKVRWETLEDVWCGMCLKH 248

Query: 61  ICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVVLPKECTNVVKC 120
           I DHLG GVKTGLPY+W ++  +   +L+K+++G+   E  +PFF S+ LP+    V  C
Sbjct: 249 ISDHLGYGVKTGLPYVWRNERGDAVESLRKKWEGMKLMEKSVPFFDSLKLPETALKVEDC 308

Query: 121 YIELSKLVKEKLGTIDPYFHKLGDAMVTWIEAWVELNSPA 160
            IEL+K VKE+LG+ DP F +  DAMV W++ W  +NS A
Sbjct: 309 VIELAKAVKEQLGSDDPAFTQAADAMVKWVQLWNSVNSSA 348


>AT5G16510.1 | Symbols:  | reversibly glycosylated polypeptide,
           putative | chr5:5393296-5394342 FORWARD
          Length = 348

 Score =  154 bits (389), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 3/160 (1%)

Query: 4   YVDVVLTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYD---DMWAGWCAKV 60
           YVD V+T+P   + P+ G+N+AFNREL+GPA+   L   G+   R++   D+W G C K 
Sbjct: 189 YVDAVMTVPAKAMLPISGINIAFNRELVGPALVPALRLAGEGKVRWETLEDVWCGMCLKH 248

Query: 61  ICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVVLPKECTNVVKC 120
           I DHLG GVKTGLPY+W ++  +   +L+K+++G+   E  +PFF S+ LP+    V  C
Sbjct: 249 ISDHLGYGVKTGLPYVWRNERGDAVESLRKKWEGMKLMEKSVPFFDSLKLPETALKVEDC 308

Query: 121 YIELSKLVKEKLGTIDPYFHKLGDAMVTWIEAWVELNSPA 160
            IEL+K VKE+LG+ DP F +  DAMV W++ W  +NS A
Sbjct: 309 VIELAKAVKEQLGSDDPAFTQAADAMVKWVQLWNSVNSSA 348