Jatropha Genome Database
- JcCB0100701.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0100701.10 - phase: 0
(240 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30620.2 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4); UDP-ar... 377 e-105
AT1G30620.1 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4); UDP-ar... 377 e-105
AT1G30620.3 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4); UDP-ar... 372 e-103
AT4G20460.2 | Symbols: | NAD-dependent epimerase/dehydratase fa... 348 2e-96
AT4G20460.1 | Symbols: | NAD-dependent epimerase/dehydratase fa... 316 8e-87
AT5G44480.1 | Symbols: DUR | DUR (DEFECTIVE UGE IN ROOT); UDP-gl... 291 3e-79
AT4G10960.1 | Symbols: UGE5 | UGE5 (UDP-D-glucose/UDP-D-galactos... 134 3e-32
AT1G64440.1 | Symbols: RHD1, REB1, UGE4 | RHD1 (ROOT HAIR DEFECT... 134 6e-32
AT4G23920.1 | Symbols: UGE2 | UGE2 (UDP-D-glucose/UDP-D-galactos... 133 1e-31
AT1G12780.1 | Symbols: UGE1 | UGE1 (UDP-D-glucose/UDP-D-galactos... 125 3e-29
AT1G63180.1 | Symbols: UGE3 | UGE3 (UDP-D-glucose/UDP-D-galactos... 119 2e-27
AT4G30440.1 | Symbols: GAE1 | GAE1 (UDP-D-GLUCURONATE 4-EPIMERAS... 79 2e-15
AT2G34850.1 | Symbols: MEE25 | MEE25 (maternal effect embryo arr... 69 2e-12
AT4G00110.1 | Symbols: GAE3 | GAE3 (UDP-D-GLUCURONATE 4-EPIMERAS... 65 3e-11
AT1G53500.1 | Symbols: MUM4, RHM2, ATRHM2, ATMUM4 | MUM4 (MUCILA... 64 6e-11
AT3G23820.1 | Symbols: GAE6 | GAE6 (UDP-D-GLUCURONATE 4-EPIMERAS... 63 2e-10
AT1G78570.1 | Symbols: RHM1, ROL1, ATRHM1 | RHM1 (RHAMNOSE BIOSY... 63 2e-10
AT1G02000.1 | Symbols: GAE2 | GAE2 (UDP-D-GLUCURONATE 4-EPIMERAS... 63 2e-10
AT3G14790.1 | Symbols: RHM3, ATRHM3 | RHM3 (RHAMNOSE BIOSYNTHESI... 62 2e-10
AT2G45310.1 | Symbols: GAE4 | GAE4 (UDP-D-GLUCURONATE 4-EPIMERAS... 62 2e-10
AT4G12250.1 | Symbols: GAE5 | GAE5 (UDP-D-GLUCURONATE 4-EPIMERAS... 62 3e-10
AT3G53520.3 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID ... 49 3e-06
AT3G53520.2 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID ... 49 3e-06
AT3G53520.1 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID ... 49 3e-06
AT2G47650.1 | Symbols: UXS4 | UXS4 (UDP-XYLOSE SYNTHASE 4); UDP-... 48 6e-06
>AT1G30620.2 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4);
UDP-arabinose 4-epimerase/ catalytic |
chr1:10855496-10857970 FORWARD
Length = 419
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/248 (75%), Positives = 206/248 (83%), Gaps = 11/248 (4%)
Query: 1 MLNIGRNRNQPRNNRSMPLGGLDYADPKRKGNIVGKIFLAAALTALCIIMLKQSPTFNTR 60
M + GR R+Q R NRSM LGGLDYADPK+K N +GKI L A+LTALCI MLKQSPTFNT
Sbjct: 1 MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60
Query: 61 SLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120
S+FS HE GVTHVLVTGGAGYIGSHAALRLLK+ YRVTIVDNLSRGNL AV++LQELFPE
Sbjct: 61 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120
Query: 121 PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180
PGRLQFIYADLGDAKAVNKIF+ENAFDAVMHFAAVAYVGEST PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180
Query: 181 ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTPQV-----------IAEILRVYVNQFDL 229
E+MAAH VKTLIYSSTCATYGEP+ MPITE+TPQV +I+ + D+
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240
Query: 230 CVCLIKIF 237
V +++ F
Sbjct: 241 AVMILRYF 248
>AT1G30620.1 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4);
UDP-arabinose 4-epimerase/ catalytic |
chr1:10855496-10857970 FORWARD
Length = 419
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/248 (75%), Positives = 206/248 (83%), Gaps = 11/248 (4%)
Query: 1 MLNIGRNRNQPRNNRSMPLGGLDYADPKRKGNIVGKIFLAAALTALCIIMLKQSPTFNTR 60
M + GR R+Q R NRSM LGGLDYADPK+K N +GKI L A+LTALCI MLKQSPTFNT
Sbjct: 1 MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60
Query: 61 SLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120
S+FS HE GVTHVLVTGGAGYIGSHAALRLLK+ YRVTIVDNLSRGNL AV++LQELFPE
Sbjct: 61 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 120
Query: 121 PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180
PGRLQFIYADLGDAKAVNKIF+ENAFDAVMHFAAVAYVGEST PLKYYHNITSNTLVVL
Sbjct: 121 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 180
Query: 181 ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTPQV-----------IAEILRVYVNQFDL 229
E+MAAH VKTLIYSSTCATYGEP+ MPITE+TPQV +I+ + D+
Sbjct: 181 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 240
Query: 230 CVCLIKIF 237
V +++ F
Sbjct: 241 AVMILRYF 248
>AT1G30620.3 | Symbols: HSR8, MUR4, UXE1 | MUR4 (MURUS 4);
UDP-arabinose 4-epimerase/ catalytic |
chr1:10855496-10857970 FORWARD
Length = 418
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/248 (75%), Positives = 205/248 (82%), Gaps = 12/248 (4%)
Query: 1 MLNIGRNRNQPRNNRSMPLGGLDYADPKRKGNIVGKIFLAAALTALCIIMLKQSPTFNTR 60
M + GR R+Q R NRSM LGGLDYADPK+K N +GKI L A+LTALCI MLKQSPTFNT
Sbjct: 1 MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60
Query: 61 SLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120
S FS HE GVTHVLVTGGAGYIGSHAALRLLK+ YRVTIVDNLSRGNL AV++LQELFPE
Sbjct: 61 S-FSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPE 119
Query: 121 PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180
PGRLQFIYADLGDAKAVNKIF+ENAFDAVMHFAAVAYVGEST PLKYYHNITSNTLVVL
Sbjct: 120 PGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVL 179
Query: 181 ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTPQV-----------IAEILRVYVNQFDL 229
E+MAAH VKTLIYSSTCATYGEP+ MPITE+TPQV +I+ + D+
Sbjct: 180 ETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDM 239
Query: 230 CVCLIKIF 237
V +++ F
Sbjct: 240 AVMILRYF 247
>AT4G20460.2 | Symbols: | NAD-dependent epimerase/dehydratase
family protein | chr4:11029767-11031765 REVERSE
Length = 411
Score = 348 bits (893), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/216 (79%), Positives = 189/216 (87%), Gaps = 3/216 (1%)
Query: 1 MLNIGRNRNQPRNNRSMPLGG-LDYADPKRKGNIVGKIFLAAALTALCIIMLKQSPTFNT 59
ML+ R R+Q RN R PLGG ++Y +PKRK N++GKI L +LTALCI MLK +P+F +
Sbjct: 1 MLSFSRARSQGRNTR--PLGGGMEYLEPKRKSNVMGKIILVVSLTALCIFMLKHAPSFTS 58
Query: 60 RSLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFP 119
+ FS EEGVTHVLVTGGAGYIGSHAALRLLKD YRVTIVDNLSRGNLGAVKVLQ LFP
Sbjct: 59 PTAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFP 118
Query: 120 EPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVV 179
EPGRLQFIYADLGDAKAV+KIFSENAFDAVMHFAAVAYVGEST+DPLKYYHNITSNTLVV
Sbjct: 119 EPGRLQFIYADLGDAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVV 178
Query: 180 LESMAAHDVKTLIYSSTCATYGEPEKMPITEDTPQV 215
LE++A H VK LIYSSTCATYGEP+KMPI E TPQV
Sbjct: 179 LEAVARHKVKKLIYSSTCATYGEPDKMPIVEVTPQV 214
>AT4G20460.1 | Symbols: | NAD-dependent epimerase/dehydratase
family protein | chr4:11029767-11031572 REVERSE
Length = 379
Score = 316 bits (810), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 154/182 (84%), Positives = 165/182 (90%)
Query: 34 VGKIFLAAALTALCIIMLKQSPTFNTRSLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKD 93
+GKI L +LTALCI MLK +P+F + + FS EEGVTHVLVTGGAGYIGSHAALRLLKD
Sbjct: 1 MGKIILVVSLTALCIFMLKHAPSFTSPTAFSRSEEGVTHVLVTGGAGYIGSHAALRLLKD 60
Query: 94 GYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFA 153
YRVTIVDNLSRGNLGAVKVLQ LFPEPGRLQFIYADLGDAKAV+KIFSENAFDAVMHFA
Sbjct: 61 SYRVTIVDNLSRGNLGAVKVLQGLFPEPGRLQFIYADLGDAKAVDKIFSENAFDAVMHFA 120
Query: 154 AVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLIYSSTCATYGEPEKMPITEDTP 213
AVAYVGEST+DPLKYYHNITSNTLVVLE++A H VK LIYSSTCATYGEP+KMPI E TP
Sbjct: 121 AVAYVGESTLDPLKYYHNITSNTLVVLEAVARHKVKKLIYSSTCATYGEPDKMPIVEVTP 180
Query: 214 QV 215
QV
Sbjct: 181 QV 182
>AT5G44480.1 | Symbols: DUR | DUR (DEFECTIVE UGE IN ROOT);
UDP-glucose 4-epimerase/ binding / catalytic/ coenzyme
binding | chr5:17921515-17923643 FORWARD
Length = 436
Score = 291 bits (744), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/239 (67%), Positives = 178/239 (74%), Gaps = 24/239 (10%)
Query: 1 MLNIGRNRNQPRNNRSMPLGG------------------------LDYADPKRKGNIVGK 36
MLN R Q R+ R + LGG +D +PK K N+ GK
Sbjct: 1 MLNSSGVRTQRRSPRPLSLGGRKIITPTKFAYDHHNPDKVLDFVEMDCLEPKTKNNLTGK 60
Query: 37 IFLAAALTALCIIMLKQSPTFNTRSLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYR 96
+ L A+L L II++ QS +F + S FS EEGVTHVLVTGGAGYIGSHAALRLL+D YR
Sbjct: 61 LLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYR 120
Query: 97 VTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVA 156
VTIVDNLSRGNLGAVK LQ+LFP+ GRLQFIYADLGD AV KIFSENAFDAVMHFAAVA
Sbjct: 121 VTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVA 180
Query: 157 YVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLIYSSTCATYGEPEKMPITEDTPQV 215
YVGEST+ PLKYYHNITSNTL VLE+MA H VK LIYSSTCATYGEPEKMPITEDTPQV
Sbjct: 181 YVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCATYGEPEKMPITEDTPQV 239
>AT4G10960.1 | Symbols: UGE5 | UGE5 (UDP-D-glucose/UDP-D-galactose
4-epimerase 5); UDP-glucose 4-epimerase/ protein
dimerization | chr4:6716083-6718472 REVERSE
Length = 351
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPG-RLQFIYAD 130
+VLV+GGAGYIGSH L+LL GY V +VDNL + +++ +++L E G RL F D
Sbjct: 5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64
Query: 131 LGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKT 190
L D A+ KIFSE FDAV+HFA + VGES PL YY+N T+ +LE MA H K
Sbjct: 65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124
Query: 191 LIYSSTCATYGEPEKMPITEDTP-----------QVIAEILR-VYVNQFDLCVCLIKIF 237
L++SS+ YG P+++P TE+ P I EI R VY + + + L++ F
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLRYF 183
>AT1G64440.1 | Symbols: RHD1, REB1, UGE4 | RHD1 (ROOT HAIR DEFECTIVE
1); UDP-glucose 4-epimerase/ protein dimerization |
chr1:23937102-23939565 FORWARD
Length = 348
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGR-LQFIY 128
V ++LVTGGAGYIGSH L+LL GY ++DNL +L +++ +++L + G+ L
Sbjct: 2 VGNILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQ 61
Query: 129 ADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDV 188
DL D A+ K+FSE FDAVMHFA + VGES PL YY+N T+ +LE MAAH
Sbjct: 62 VDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGC 121
Query: 189 KTLIYSSTCATYGEPEKMPITEDTP 213
K L++SS+ YG P+++P TE++P
Sbjct: 122 KKLVFSSSATVYGWPKEVPCTEESP 146
>AT4G23920.1 | Symbols: UGE2 | UGE2 (UDP-D-glucose/UDP-D-galactose
4-epimerase 2); UDP-glucose 4-epimerase/ protein
dimerization | chr4:12431416-12433666 FORWARD
Length = 350
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPG-RLQFIYADL 131
VLVTGGAGYIGSH L+LL+ GY +VDN + +++ +++L E G RL F DL
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 132 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTL 191
D A+ KIFSE FDAV+HFA + VGES PL YY+N T+ +LE MA + K L
Sbjct: 65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124
Query: 192 IYSSTCATYGEPEKMPITEDTP 213
++SS+ YG P+++P TE++P
Sbjct: 125 VFSSSATVYGWPKEVPCTEESP 146
>AT1G12780.1 | Symbols: UGE1 | UGE1 (UDP-D-glucose/UDP-D-galactose
4-epimerase 1); UDP-glucose 4-epimerase/ protein
dimerization | chr1:4356124-4358120 REVERSE
Length = 351
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 95/142 (66%), Gaps = 2/142 (1%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELF-PE-PGRLQFIYA 129
++LVTGGAG+IG+H ++LLKDG++V+I+DN + AV ++EL P+ +L F
Sbjct: 8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLG 67
Query: 130 DLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVK 189
DL + + K+FS+ FDAV+HFA + VGES +P +Y+ N T+ + E+MA ++ K
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 190 TLIYSSTCATYGEPEKMPITED 211
+++SS+ YG+PEK+P ED
Sbjct: 128 MMVFSSSATVYGQPEKIPCMED 149
>AT1G63180.1 | Symbols: UGE3 | UGE3 (UDP-D-glucose/UDP-D-galactose
4-epimerase 3); UDP-glucose 4-epimerase/ protein
dimerization | chr1:23427559-23429384 REVERSE
Length = 351
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Query: 72 HVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELF-PE-PGRLQFIYA 129
++LVTGGAG+IG+H ++LL G++VTI+DNL + AV ++EL P+ +L+F
Sbjct: 8 NILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNLG 67
Query: 130 DLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVK 189
DL + + K+FS FDAV+HFA + VGES +P +Y+ N T+ + E+MA ++ K
Sbjct: 68 DLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 190 TLIYSSTCATYGEPEKMPITED 211
+++SS+ YG+PE +P ED
Sbjct: 128 MMVFSSSATVYGQPEIVPCVED 149
>AT4G30440.1 | Symbols: GAE1 | GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE
1); UDP-glucuronate 4-epimerase/ catalytic |
chr4:14881976-14883265 REVERSE
Length = 429
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 60 RSLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFP 119
R+ +H G VLVTG G++GSH +L L K G V +DN + ++K +
Sbjct: 77 RTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLL 136
Query: 120 EPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVV 179
+ + DL DAK + K+F AF VMH AA A V + +P Y H+ + + +
Sbjct: 137 SSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNL 196
Query: 180 LE-SMAAHDVKTLIYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVNQ 226
LE AA+ ++++S+ + YG EK+P +E D P + EI Y +
Sbjct: 197 LEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEITHTYNHI 256
Query: 227 FDLCVCLIKIFLWY 240
+ L + ++ F Y
Sbjct: 257 YGLAITGLRFFTVY 270
>AT2G34850.1 | Symbols: MEE25 | MEE25 (maternal effect embryo arrest
25); UDP-glucose 4-epimerase/ binding / catalytic/
coenzyme binding | chr2:14704792-14705768 REVERSE
Length = 236
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 183 MAAHDVKTLIYSSTCATYGEPEKMPITEDTPQV 215
MAAH VKTLIYSSTCATYGEPEKMPITE+TPQV
Sbjct: 1 MAAHGVKTLIYSSTCATYGEPEKMPITEETPQV 33
>AT4G00110.1 | Symbols: GAE3 | GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE
3); UDP-glucuronate 4-epimerase/ catalytic |
chr4:38702-39994 REVERSE
Length = 430
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 51 LKQSPTFNTRSLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGA 110
++ S TR FSV LVTG AG++G+H + L + G V +DN + +
Sbjct: 79 VRSSARLRTRRGFSV--------LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPS 130
Query: 111 VKVLQELFPEPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYH 170
+K ++ E + + D+ DA + K+F F VMH AA A V + +P Y H
Sbjct: 131 LKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVH 190
Query: 171 NITSNTLVVLE-SMAAHDVKTLIYSSTCATYGEPEKMPITE----DTPQVI--------A 217
+ + + +LE +A+ ++++S+ + YG K+P +E D P +
Sbjct: 191 SNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGE 250
Query: 218 EILRVYVNQFDLCVCLIKIFLWY 240
EI Y + + L + ++ F Y
Sbjct: 251 EIAHTYNHIYGLSLTGLRFFTVY 273
>AT1G53500.1 | Symbols: MUM4, RHM2, ATRHM2, ATMUM4 | MUM4
(MUCILAGE-MODIFIED 4);
UDP-4-keto-6-deoxy-glucose-3,5-epimerase/
UDP-4-keto-rhamnose-4-keto-reductase/ UDP-L-rhamnose
synthase/ UDP-glucose 4,6-dehydratase/ catalytic |
chr1:19967157-19969239 REVERSE
Length = 667
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD--GYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYA 129
++L+TG AG+I SH A RL+++ Y++ ++D L +K L F P +F+
Sbjct: 10 NILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY--CSDLKNLDPSFSSPN-FKFVKG 66
Query: 130 DLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLES-MAAHDV 188
D+ VN + D +MHFAA +V S + ++ N T V+LE+ +
Sbjct: 67 DIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 126
Query: 189 KTLIYSSTCATYGEPEK 205
+ I+ ST YGE ++
Sbjct: 127 RRFIHVSTDEVYGETDE 143
>AT3G23820.1 | Symbols: GAE6 | GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE
6); UDP-glucuronate 4-epimerase/ catalytic |
chr3:8603645-8605027 FORWARD
Length = 460
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
VLVTG AG++GSH +L L K G V DN + ++K ++ E ++ + DL
Sbjct: 114 VLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLN 173
Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLE-SMAAHDVKTL 191
D + K+F F ++H AA A V + +P Y + + + +LE + AA+ +
Sbjct: 174 DGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAI 233
Query: 192 IYSSTCATYGEPEKMPITED------------TPQVIAEILRVYVNQFDLCVCLIKIFLW 239
+++S+ + YG + P +E+ T + EI Y + + L + ++ F
Sbjct: 234 VWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 293
Query: 240 Y 240
Y
Sbjct: 294 Y 294
>AT1G78570.1 | Symbols: RHM1, ROL1, ATRHM1 | RHM1 (RHAMNOSE
BIOSYNTHESIS 1); UDP-L-rhamnose synthase/ UDP-glucose
4,6-dehydratase/ catalytic | chr1:29550110-29552207
FORWARD
Length = 669
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD--GYRVTIVDNLSRGNLGAVKVLQELFP--EPGRLQFI 127
++L+TG AG+I SH A RL++ Y++ ++D L L+ L P +F+
Sbjct: 8 NILITGAAGFIASHVANRLIRSYPDYKIVVLDKLD-----YCSNLKNLNPSKHSPNFKFV 62
Query: 128 YADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLES-MAAH 186
D+ A VN + D +MHFAA +V S + ++ N T V+LE+
Sbjct: 63 KGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
Query: 187 DVKTLIYSSTCATYGEPEK 205
++ I+ ST YGE ++
Sbjct: 123 QIRRFIHVSTDEVYGETDE 141
>AT1G02000.1 | Symbols: GAE2 | GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE
2); UDP-glucuronate 4-epimerase/ catalytic |
chr1:346052-347356 FORWARD
Length = 434
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 60 RSLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFP 119
RS V VLVTG AG++G+H + L + G V +DN + ++K ++
Sbjct: 81 RSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALL 140
Query: 120 EPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVV 179
E + + D+ D + K+F F VMH AA A V + +P Y H+ + + +
Sbjct: 141 ERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNL 200
Query: 180 LE-SMAAHDVKTLIYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVNQ 226
LE +A+ ++++S+ + YG K+P +E D P + EI Y +
Sbjct: 201 LEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHI 260
Query: 227 FDLCVCLIKIFLWY 240
+ L + ++ F Y
Sbjct: 261 YGLSLTGLRFFTVY 274
>AT3G14790.1 | Symbols: RHM3, ATRHM3 | RHM3 (RHAMNOSE BIOSYNTHESIS
3); UDP-L-rhamnose synthase/ catalytic |
chr3:4964791-4966875 FORWARD
Length = 664
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD--GYRVTIVDNLSRGNLGAVKVLQELFPEPG--RLQFI 127
++L+TG AG+I SH A RL++ Y++ ++D L L+ L P +F+
Sbjct: 8 NILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD-----YCSNLKNLNPSKSSPNFKFV 62
Query: 128 YADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLES-MAAH 186
D+ A VN + D +MHFAA +V S + ++ N T V+LE+
Sbjct: 63 KGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
Query: 187 DVKTLIYSSTCATYGEPEK 205
++ I+ ST YGE ++
Sbjct: 123 QIRRFIHVSTDEVYGETDE 141
>AT2G45310.1 | Symbols: GAE4 | GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE
4); binding / catalytic/ coenzyme binding / racemase and
epimerase, acting on carbohydrates and derivatives |
chr2:18682652-18683965 FORWARD
Length = 437
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 69 GVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIY 128
G+T VLVTG AG++G+H + L + G V +DN + ++K + E + +
Sbjct: 96 GIT-VLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVE 154
Query: 129 ADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLE-SMAAHD 187
D+ D + + K+F +F VMH AA A V + +P Y H+ + + +LE + +
Sbjct: 155 GDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNP 214
Query: 188 VKTLIYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVNQFDLCVCLIK 235
++++S+ + YG K+P +E D P + EI Y + + L + ++
Sbjct: 215 QPAIVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 274
Query: 236 IFLWY 240
F Y
Sbjct: 275 FFTVY 279
>AT4G12250.1 | Symbols: GAE5 | GAE5 (UDP-D-GLUCURONATE 4-EPIMERASE
5); UDP-glucuronate 4-epimerase/ catalytic |
chr4:7289538-7290848 REVERSE
Length = 436
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
VLVTG +G++G+H ++ L + G V +DN +R +K ++ E + + D+
Sbjct: 98 VLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDIN 157
Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLE-SMAAHDVKTL 191
DA + K+F F VMH AA A V + +P Y ++ + + +LE S +A+ +
Sbjct: 158 DAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAI 217
Query: 192 IYSSTCATYGEPEKMPITE 210
+++S+ + YG K+P +E
Sbjct: 218 VWASSSSVYGLNSKVPFSE 236
>AT3G53520.3 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID
DECARBOXYLASE 1); UDP-glucuronate decarboxylase/
catalytic | chr3:19841635-19843520 FORWARD
Length = 354
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
++VTGGAG++GSH +L+ G V ++DN G + L LF P R + I D+
Sbjct: 122 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR---KENLVHLFSNP-RFELIRHDV- 176
Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLI 192
V I E D + H A A +P+K TL +L +A +
Sbjct: 177 ----VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML-GLAKRVGARFL 229
Query: 193 YSSTCATYGEPEKMPITE 210
+ST YG+P + P E
Sbjct: 230 LTSTSEVYGDPLEHPQKE 247
>AT3G53520.2 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID
DECARBOXYLASE 1); UDP-glucuronate decarboxylase/
catalytic | chr3:19841635-19844057 FORWARD
Length = 433
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
++VTGGAG++GSH +L+ G V ++DN G + L LF P R + I D+
Sbjct: 122 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF---TGRKENLVHLFSNP-RFELIRHDV- 176
Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLI 192
V I E D + H A A +P+K TL +L +A +
Sbjct: 177 ----VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML-GLAKRVGARFL 229
Query: 193 YSSTCATYGEPEKMPITE 210
+ST YG+P + P E
Sbjct: 230 LTSTSEVYGDPLEHPQKE 247
>AT3G53520.1 | Symbols: UXS1, ATUXS1 | UXS1 (UDP-GLUCURONIC ACID
DECARBOXYLASE 1); UDP-glucuronate decarboxylase/
catalytic | chr3:19841635-19844057 FORWARD
Length = 435
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
++VTGGAG++GSH +L+ G V ++DN G + L LF P R + I D+
Sbjct: 122 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF---TGRKENLVHLFSNP-RFELIRHDV- 176
Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLI 192
V I E D + H A A +P+K TL +L +A +
Sbjct: 177 ----VEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML-GLAKRVGARFL 229
Query: 193 YSSTCATYGEPEKMPITE 210
+ST YG+P + P E
Sbjct: 230 LTSTSEVYGDPLEHPQKE 247
>AT2G47650.1 | Symbols: UXS4 | UXS4 (UDP-XYLOSE SYNTHASE 4);
UDP-glucuronate decarboxylase/ catalytic |
chr2:19538751-19541364 REVERSE
Length = 443
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 60/141 (42%), Gaps = 12/141 (8%)
Query: 70 VTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYA 129
V V+VTGGAG++GSH RL+ G V +VDN G V F P + I
Sbjct: 120 VLRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENV---MHHFNNPN-FEMIRH 175
Query: 130 DLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVK 189
D+ V I E D + H A A +P+K TL +L +A
Sbjct: 176 DV-----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVGA 227
Query: 190 TLIYSSTCATYGEPEKMPITE 210
+ +ST YG+P + P E
Sbjct: 228 RFLLTSTSEVYGDPLQHPQVE 248