Jatropha Genome Database
- JcCB0100471.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0100471.10 + phase: 2 /pseudo/partial
(72 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62360.1 | Symbols: STM, BUM1, SHL, WAM1, BUM, WAM | STM (SHO... 128 6e-31
AT4G08150.1 | Symbols: KNAT1, BP, BP1 | KNAT1 (KNOTTED-LIKE FROM... 93 3e-20
AT1G23380.1 | Symbols: KNAT6, KNAT6L, KNAT6S | KNAT6; DNA bindin... 80 2e-16
AT1G23380.2 | Symbols: KNAT6, KNAT6L, KNAT6S | KNAT6; DNA bindin... 80 2e-16
AT1G70510.1 | Symbols: KNAT2, ATK1 | KNAT2 (KNOTTED-LIKE FROM AR... 78 9e-16
AT1G75430.1 | Symbols: BLH11 | BLH11 (BEL1-LIKE HOMEODOMAIN 11);... 48 1e-06
AT1G62990.1 | Symbols: KNAT7, IXR11 | KNAT7 (KNOTTED-LIKE HOMEOB... 48 2e-06
AT4G32040.1 | Symbols: KNAT5 | KNAT5 (KNOTTED1-LIKE HOMEOBOX GEN... 47 4e-06
AT1G19700.2 | Symbols: BEL10, BLH10 | BEL10 (BEL1-LIKE HOMEODOMA... 46 5e-06
AT1G19700.1 | Symbols: BEL10, BLH10 | BEL10 (BEL1-LIKE HOMEODOMA... 46 5e-06
AT5G25220.1 | Symbols: KNAT3 | KNAT3 (KNOTTED1-LIKE HOMEOBOX GEN... 46 5e-06
AT5G25220.2 | Symbols: KNAT3 | KNAT3 (KNOTTED1-LIKE HOMEOBOX GEN... 46 5e-06
AT5G11060.1 | Symbols: KNAT4 | KNAT4 (KNOTTED1-LIKE HOMEOBOX GEN... 46 6e-06
>AT1G62360.1 | Symbols: STM, BUM1, SHL, WAM1, BUM, WAM | STM (SHOOT
MERISTEMLESS); transcription factor |
chr1:23058796-23061722 REVERSE
Length = 382
Score = 128 bits (322), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/69 (89%), Positives = 65/69 (94%), Gaps = 2/69 (2%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHP-HYYVDNVLGNPFP 64
E QKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHP HY++DNVLGNPFP
Sbjct: 314 EQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHHYFMDNVLGNPFP 373
Query: 65 MD-ISPTLL 72
MD IS T+L
Sbjct: 374 MDHISSTML 382
>AT4G08150.1 | Symbols: KNAT1, BP, BP1 | KNAT1 (KNOTTED-LIKE FROM
ARABIDOPSIS THALIANA); transcription factor |
chr4:5147969-5150610 REVERSE
Length = 398
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA-THPHY---YVDNVLGN 61
ES+K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD HPH+ Y+D
Sbjct: 331 ESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMDGHYMG 390
Query: 62 PFPMDISP 69
P + P
Sbjct: 391 DGPYRLGP 398
>AT1G23380.1 | Symbols: KNAT6, KNAT6L, KNAT6S | KNAT6; DNA binding /
transcription activator/ transcription factor |
chr1:8297499-8302492 REVERSE
Length = 327
Score = 80.5 bits (197), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYVD 56
E K+ALA++TGLDQKQINNWFINQRKRHWKPSE+M F +MD + ++ +
Sbjct: 276 EGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTE 326
>AT1G23380.2 | Symbols: KNAT6, KNAT6L, KNAT6S | KNAT6; DNA binding /
transcription activator/ transcription factor |
chr1:8297499-8302492 REVERSE
Length = 329
Score = 80.5 bits (197), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYVD 56
E K+ALA++TGLDQKQINNWFINQRKRHWKPSE+M F +MD + ++ +
Sbjct: 278 EGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTE 328
>AT1G70510.1 | Symbols: KNAT2, ATK1 | KNAT2 (KNOTTED-LIKE FROM
ARABIDOPSIS THALIANA 2); transcription factor |
chr1:26576635-26582145 FORWARD
Length = 310
Score = 78.2 bits (191), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYVD 56
E K++LAE TGLDQKQINNWFINQRKRHWKPSE+M F +MD ++ ++ +
Sbjct: 259 TEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSNETFFTE 310
>AT1G75430.1 | Symbols: BLH11 | BLH11 (BEL1-LIKE HOMEODOMAIN 11);
transcription factor | chr1:28308121-28309517 REVERSE
Length = 290
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKP 37
E++KL LA TGL + Q++NWFIN R R WKP
Sbjct: 232 EAEKLVLASQTGLSKNQVSNWFINARVRLWKP 263
>AT1G62990.1 | Symbols: KNAT7, IXR11 | KNAT7 (KNOTTED-LIKE HOMEOBOX
OF ARABIDOPSIS THALIANA 7); DNA binding / transcription
activator/ transcription factor | chr1:23337468-23340348
FORWARD
Length = 291
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 22/31 (70%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHW 35
E K L E TGL KQINNWFINQRKR+W
Sbjct: 245 TEDDKAKLVEETGLQLKQINNWFINQRKRNW 275
>AT4G32040.1 | Symbols: KNAT5 | KNAT5 (KNOTTED1-LIKE HOMEOBOX GENE
5); transcription activator/ transcription factor |
chr4:15494127-15496009 FORWARD
Length = 383
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHW 35
E K L + TGL KQINNWFINQRKR+W
Sbjct: 332 TEEDKAKLVQETGLQLKQINNWFINQRKRNW 362
>AT1G19700.2 | Symbols: BEL10, BLH10 | BEL10 (BEL1-LIKE HOMEODOMAIN
10); DNA binding / transcription factor |
chr1:6809958-6811854 REVERSE
Length = 538
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKP 37
ES+K+ LA+ TGL + Q+ NWFIN R R WKP
Sbjct: 381 ESEKIMLAKQTGLSKNQVANWFINARVRLWKP 412
>AT1G19700.1 | Symbols: BEL10, BLH10 | BEL10 (BEL1-LIKE HOMEODOMAIN
10); DNA binding / transcription factor |
chr1:6809958-6811854 REVERSE
Length = 538
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 6 ESQKLALAESTGLDQKQINNWFINQRKRHWKP 37
ES+K+ LA+ TGL + Q+ NWFIN R R WKP
Sbjct: 381 ESEKIMLAKQTGLSKNQVANWFINARVRLWKP 412
>AT5G25220.1 | Symbols: KNAT3 | KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE
3); transcription activator/ transcription factor |
chr5:8736208-8738115 FORWARD
Length = 431
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHW 35
E K L + TGL KQINNWFINQRKR+W
Sbjct: 373 TEEDKARLVQETGLQLKQINNWFINQRKRNW 403
>AT5G25220.2 | Symbols: KNAT3 | KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE
3); transcription activator/ transcription factor |
chr5:8736208-8738087 FORWARD
Length = 419
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHW 35
E K L + TGL KQINNWFINQRKR+W
Sbjct: 373 TEEDKARLVQETGLQLKQINNWFINQRKRNW 403
>AT5G11060.1 | Symbols: KNAT4 | KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE
4); transcription activator/ transcription factor |
chr5:3510408-3512967 FORWARD
Length = 393
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 5 VESQKLALAESTGLDQKQINNWFINQRKRHW 35
E K L + TGL KQINNWFINQRKR+W
Sbjct: 337 TEEDKARLVQETGLQLKQINNWFINQRKRNW 367