Jatropha Genome Database

JcCB0099601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0099601.10 - phase: 0 /partial
         (51 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27450.1 | Symbols: NLP1, ATNLP1, CPA | NLP1 (NITRILASE-LIKE ...    73   4e-14
AT2G27450.2 | Symbols: NLP1, ATNLP1, CPA | NLP1 (NITRILASE-LIKE ...    58   1e-09

>AT2G27450.1 | Symbols: NLP1, ATNLP1, CPA | NLP1 (NITRILASE-LIKE
          PROTEIN 1); N-carbamoylputrescine amidase/ hydrolase,
          acting on carbon-nitrogen (but not peptide) bonds |
          chr2:11737666-11739577 REVERSE
          Length = 299

 Score = 72.8 bits (177), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 1/48 (2%)

Query: 1  MEKE-KGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          ME E + REVVVS+LQFAC+DDI+TNV  AERLVR AH  GANIILIQ
Sbjct: 1  METEGRRREVVVSSLQFACSDDISTNVAAAERLVREAHAKGANIILIQ 48


>AT2G27450.2 | Symbols: NLP1, ATNLP1, CPA | NLP1 (NITRILASE-LIKE
          PROTEIN 1); N-carbamoylputrescine amidase/ hydrolase,
          acting on carbon-nitrogen (but not peptide) bonds |
          chr2:11737666-11739577 REVERSE
          Length = 326

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/75 (48%), Positives = 40/75 (53%), Gaps = 28/75 (37%)

Query: 1  MEKE-KGREVVVSALQFACTDDITTNVDTAER---------------------------L 32
          ME E + REVVVS+LQFAC+DDI+TNV  AER                           L
Sbjct: 1  METEGRRREVVVSSLQFACSDDISTNVAAAERFVSLSSSLPLSNYQSLPSSSSFKFPYAL 60

Query: 33 VRAAHGNGANIILIQ 47
          VR AH  GANIILIQ
Sbjct: 61 VREAHAKGANIILIQ 75