Jatropha Genome Database

JcCB0099081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0099081.10 + phase: 0 /partial
         (158 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07650.1 | Symbols:  | formin homology 2 domain-containing pr...   184   2e-47
AT5G58160.1 | Symbols:  | actin binding | chr5:23533724-23539465...   176   5e-45
AT5G07760.1 | Symbols:  | formin homology 2 domain-containing pr...   175   1e-44
AT2G25050.1 | Symbols:  | formin homology 2 domain-containing pr...   169   5e-43
AT5G07770.1 | Symbols:  | formin homology 2 domain-containing pr...   169   7e-43
AT5G07780.1 | Symbols:  | formin homology 2 domain-containing pr...   164   2e-41
AT3G32400.1 | Symbols:  | formin homology 2 domain-containing pr...   160   3e-40
AT1G31810.1 | Symbols:  | actin binding | chr1:11399922-11405761...   153   5e-38
AT1G42980.1 | Symbols:  | formin homology 2 domain-containing pr...    62   1e-10

>AT5G07650.1 | Symbols:  | formin homology 2 domain-containing
           protein / FH2 domain-containing protein |
           chr5:2416375-2421814 REVERSE
          Length = 815

 Score =  184 bits (466), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 89/124 (71%), Positives = 108/124 (87%)

Query: 1   VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
           VLA+K+  LLDFH DL SLE A+KIQLKSLAEE+QAI KGLEK+ ++L ASE DGPVS+V
Sbjct: 668 VLASKASDLLDFHKDLESLESASKIQLKSLAEEIQAITKGLEKLNKQLTASESDGPVSQV 727

Query: 61  FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
           FRK LK+FIS+AET+VA+V++LYS VG+NADALA YFGEDP   PFE+VT TLL+F+RLF
Sbjct: 728 FRKVLKDFISMAETQVATVSSLYSSVGKNADALAHYFGEDPNHYPFEKVTTTLLSFIRLF 787

Query: 121 RKAH 124
           +KAH
Sbjct: 788 KKAH 791



 Score =  170 bits (430), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/124 (66%), Positives = 103/124 (83%)

Query: 1   VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
           VLA+++  LLD + DL SLE A+KIQ+KSLA+ +QAIIK LEK+KQEL ASE DGP SEV
Sbjct: 329 VLASEASELLDVYKDLQSLESASKIQVKSLAQNIQAIIKRLEKLKQELTASETDGPASEV 388

Query: 61  FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
           F  TLK+FIS+AETE+A+V +LYSVV + ADAL  YFGEDP +CPFEQ+T TL NF++LF
Sbjct: 389 FCNTLKDFISIAETEMATVLSLYSVVRKKADALPPYFGEDPNQCPFEQLTMTLFNFIKLF 448

Query: 121 RKAH 124
           +KAH
Sbjct: 449 KKAH 452


>AT5G58160.1 | Symbols:  | actin binding | chr5:23533724-23539465
            FORWARD
          Length = 1324

 Score =  176 bits (446), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 98/124 (79%)

Query: 1    VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
            +LA K P +LDF  +L SLEPATKIQLK LAEEMQAI KGLEKV QEL+ SE DGP+S  
Sbjct: 1139 ILAEKIPEVLDFTKELSSLEPATKIQLKFLAEEMQAINKGLEKVVQELSLSENDGPISHN 1198

Query: 61   FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
            F K LKEF+  AE EV S+ +LYS VGRN D L LYFGEDPA+CPFEQV +TLLNFVRLF
Sbjct: 1199 FNKILKEFLHYAEAEVRSLASLYSGVGRNVDGLILYFGEDPAKCPFEQVVSTLLNFVRLF 1258

Query: 121  RKAH 124
             +AH
Sbjct: 1259 NRAH 1262


>AT5G07760.1 | Symbols:  | formin homology 2 domain-containing
           protein / FH2 domain-containing protein |
           chr5:2468239-2473657 FORWARD
          Length = 853

 Score =  175 bits (443), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 102/124 (82%)

Query: 1   VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
           VLA+++  LLD H DL SLE A+K QLKSLAEEMQ II+ LEK+ QEL A+E DGP S+V
Sbjct: 361 VLASEASDLLDVHKDLQSLESASKKQLKSLAEEMQDIIRDLEKLNQELTAAETDGPDSQV 420

Query: 61  FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
           FR TLK+FIS+AETEV +V +LYSVVG+NA AL  YFGEDP  CPFEQVTATLL+F+RLF
Sbjct: 421 FRNTLKDFISIAETEVKTVLSLYSVVGKNAVALVNYFGEDPKWCPFEQVTATLLHFIRLF 480

Query: 121 RKAH 124
            KAH
Sbjct: 481 EKAH 484



 Score =  151 bits (382), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/108 (70%), Positives = 88/108 (81%)

Query: 1   VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
           VLA+K+  LLDFH DL +LE A+KI LKSLAEEM AI KGL+K+ QEL ASE DGP+SEV
Sbjct: 698 VLASKASDLLDFHKDLENLESASKIHLKSLAEEMVAITKGLQKLNQELTASESDGPISEV 757

Query: 61  FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQ 108
           FRK LK+FISVAET+VA+V++LYS VG N DAL  YFGEDP   PFEQ
Sbjct: 758 FRKLLKDFISVAETQVATVSSLYSSVGGNTDALVHYFGEDPNDYPFEQ 805


>AT2G25050.1 | Symbols:  | formin homology 2 domain-containing protein
            / FH2 domain-containing protein | chr2:10654108-10659383
            REVERSE
          Length = 1111

 Score =  169 bits (429), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 99/124 (79%)

Query: 1    VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
            VLA K P LL+F  DLVSLE ATKIQLK LAEEMQAI KGLEKV QE  ASE DG +S+ 
Sbjct: 957  VLAEKLPELLNFPKDLVSLEAATKIQLKYLAEEMQAISKGLEKVVQEFTASETDGQISKH 1016

Query: 61   FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
            FR  LKEF+SVAE EV S+ +LYS VG +ADALALYFGEDPAR PFEQV +TL NFVR+F
Sbjct: 1017 FRMNLKEFLSVAEGEVRSLASLYSTVGGSADALALYFGEDPARVPFEQVVSTLQNFVRIF 1076

Query: 121  RKAH 124
             ++H
Sbjct: 1077 VRSH 1080


>AT5G07770.1 | Symbols:  | formin homology 2 domain-containing
           protein / FH2 domain-containing protein |
           chr5:2474816-2479022 FORWARD
          Length = 722

 Score =  169 bits (428), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 86/124 (69%), Positives = 101/124 (81%)

Query: 1   VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
           VLA+K+  LLDFH DL SLE   +I LKSLAEE+ AI KGLEK+KQEL ASE DGPVS+V
Sbjct: 426 VLASKAADLLDFHKDLQSLESTLEINLKSLAEEIHAITKGLEKLKQELTASETDGPVSQV 485

Query: 61  FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
           FRK LK+FIS AET+VA+V+ LYS    NADALA YFGEDP   PFE+V+ATLL+F+RLF
Sbjct: 486 FRKLLKDFISSAETQVATVSTLYSSARINADALAHYFGEDPNHYPFEKVSATLLSFIRLF 545

Query: 121 RKAH 124
           +KAH
Sbjct: 546 KKAH 549


>AT5G07780.1 | Symbols:  | formin homology 2 domain-containing
           protein / FH2 domain-containing protein |
           chr5:2479707-2482638 FORWARD
          Length = 464

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 100/124 (80%), Gaps = 3/124 (2%)

Query: 1   VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
           VLA+K+  LLDFH DL SLE A+KIQLKSLAEE+QAI KGLEK+KQEL ASE DGPVS+V
Sbjct: 320 VLASKASDLLDFHKDLESLESASKIQLKSLAEEIQAITKGLEKLKQELTASETDGPVSQV 379

Query: 61  FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
           FRK LKEFIS AET+VA+V  LY     NA+ALA YFG      PFEQVTATLL+F+RLF
Sbjct: 380 FRKLLKEFISNAETQVATVMALYYPARGNAEALAHYFG---YHYPFEQVTATLLSFIRLF 436

Query: 121 RKAH 124
           +KAH
Sbjct: 437 KKAH 440


>AT3G32400.1 | Symbols:  | formin homology 2 domain-containing
           protein / FH2 domain-containing protein |
           chr3:13356995-13360572 REVERSE
          Length = 488

 Score =  160 bits (405), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 83/124 (66%), Positives = 95/124 (76%)

Query: 1   VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
           VLA K P LL+F  D+VSLE AT IQLK LAEEMQA  KGLEKV QE  ASE D  +S+ 
Sbjct: 334 VLAEKLPGLLNFPKDMVSLEAATNIQLKYLAEEMQATSKGLEKVVQEFTASETDCQISKH 393

Query: 61  FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
           F   LKEF+SVAE EV S+ +LYS VG +ADALALYFGEDPAR PFEQV +TL NFVR+F
Sbjct: 394 FHMNLKEFLSVAEGEVRSLASLYSTVGGSADALALYFGEDPARVPFEQVVSTLQNFVRIF 453

Query: 121 RKAH 124
            ++H
Sbjct: 454 VRSH 457


>AT1G31810.1 | Symbols:  | actin binding | chr1:11399922-11405761
            REVERSE
          Length = 1230

 Score =  153 bits (386), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 77/123 (62%), Positives = 95/123 (77%)

Query: 1    VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
            ++  K P LLDF  DLV LE A+KI+LK+LAEEMQA  KGLEKV+QEL ASE DG +S  
Sbjct: 1062 LVGEKMPELLDFANDLVHLEAASKIELKTLAEEMQAATKGLEKVEQELMASENDGAISLG 1121

Query: 61   FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
            FRK LKEF+ +A+ EV ++ +LYS VGRNAD+L+ YFGEDPARCPFEQVT  L  F++ F
Sbjct: 1122 FRKVLKEFLDMADEEVKTLASLYSEVGRNADSLSHYFGEDPARCPFEQVTKILTLFMKTF 1181

Query: 121  RKA 123
             K+
Sbjct: 1182 IKS 1184


>AT1G42980.1 | Symbols:  | formin homology 2 domain-containing
           protein / FH2 domain-containing protein |
           chr1:16133344-16135456 FORWARD
          Length = 299

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 9   LLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEVFRKTLKEF 68
           LLDF  DLV LE A++I+L+++  +MQ +    E+V  E  ASE DG     +R  + +F
Sbjct: 160 LLDFGNDLVHLEAASRIELETITNKMQELFDIEEEVNDEFLASENDGANFVGYRNVVHDF 219

Query: 69  ISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAH 124
           +   + +   +  LY+ VG   ++   Y  E P+   F++ T  L  FV  F K+ 
Sbjct: 220 LCTIDGDKQLLNILYAEVGGLVNS---YIAEYPSGVRFKEATNILTRFVETFYKSR 272