Jatropha Genome Database

JcCB0098751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0098751.20 + phase: 0 /partial
         (227 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33070.1 | Symbols:  | pyruvate decarboxylase, putative | chr...   401   e-112
AT5G01320.1 | Symbols:  | pyruvate decarboxylase, putative | chr...   397   e-111
AT5G54960.1 | Symbols: PDC2 | PDC2 (pyruvate decarboxylase-2); c...   390   e-109
AT5G01330.1 | Symbols: PDC3 | PDC3 (pyruvate decarboxylase-3); c...   345   9e-96

>AT4G33070.1 | Symbols:  | pyruvate decarboxylase, putative |
           chr4:15952519-15954676 REVERSE
          Length = 607

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/227 (86%), Positives = 208/227 (91%), Gaps = 2/227 (0%)

Query: 1   MDTKIGSLDTCKPTNGDLCSPPNSTVSTIQGSVSPTFHTPP--DSTLGRHLARRLVQIGV 58
           MDTKIGS+D CKPTNGD+CSP N TV+TI  SV  +  T    D+TLGRHLARRLVQ GV
Sbjct: 1   MDTKIGSIDDCKPTNGDVCSPTNGTVATIHNSVPSSAITINYCDATLGRHLARRLVQAGV 60

Query: 59  SDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 118
           +DVFSVPGDFNLTLLDHL+AEP LNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL
Sbjct: 61  TDVFSVPGDFNLTLLDHLMAEPDLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 120

Query: 119 SVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCFQAVV 178
           SVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTC+QAVV
Sbjct: 121 SVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVV 180

Query: 179 NNLEDAHEQIDTAISTALKESKPVYLSVSCNLPGIPHPTFSREPVPF 225
           NNL+DAHEQID AISTALKESKPVY+SVSCNL  IPH TFSR+PVPF
Sbjct: 181 NNLDDAHEQIDKAISTALKESKPVYISVSCNLAAIPHHTFSRDPVPF 227


>AT5G01320.1 | Symbols:  | pyruvate decarboxylase, putative |
           chr5:129484-131625 REVERSE
          Length = 603

 Score =  397 bits (1020), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/225 (84%), Positives = 207/225 (92%), Gaps = 2/225 (0%)

Query: 1   MDTKIGSLDTCKPTNGDLCSPPNSTVSTIQGSVSPTFHTPPDSTLGRHLARRLVQIGVSD 60
           MDTKIG++DTCKPT GD+ SPP++ V+TIQ S   T  T  +STLGRHL+RRLVQ GV+D
Sbjct: 1   MDTKIGAIDTCKPTTGDIGSPPSNAVATIQDSAPIT--TTSESTLGRHLSRRLVQAGVTD 58

Query: 61  VFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSV 120
           VFSVPGDFNLTLLDHLIAEP LN IGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSV
Sbjct: 59  VFSVPGDFNLTLLDHLIAEPELNNIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSV 118

Query: 121 LNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCFQAVVNN 180
           LNAIAGAYSENLPVICIVGGPNSND+GTNRILHHTIGLPDFSQELRCFQTVTC+QAVVNN
Sbjct: 119 LNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNN 178

Query: 181 LEDAHEQIDTAISTALKESKPVYLSVSCNLPGIPHPTFSREPVPF 225
           LEDAHEQID AI+TALKESKPVY+S+SCNL   PHPTF+R+PVPF
Sbjct: 179 LEDAHEQIDKAIATALKESKPVYISISCNLAATPHPTFARDPVPF 223


>AT5G54960.1 | Symbols: PDC2 | PDC2 (pyruvate decarboxylase-2);
           carboxy-lyase/ catalytic/ magnesium ion binding /
           pyruvate decarboxylase/ thiamin pyrophosphate binding |
           chr5:22310858-22312681 REVERSE
          Length = 607

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/227 (83%), Positives = 205/227 (90%), Gaps = 2/227 (0%)

Query: 1   MDTKIGSLDTCKPTNGDLCSPPNSTVSTIQGS--VSPTFHTPPDSTLGRHLARRLVQIGV 58
           MDTKIGS+D C PTN D+  PPN  VST+Q +  +  T  +P D+TLGR+LARRLV+IGV
Sbjct: 1   MDTKIGSIDACNPTNHDIGGPPNGGVSTVQNTSPLHSTTVSPCDATLGRYLARRLVEIGV 60

Query: 59  SDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 118
           +DVFSVPGDFNLTLLDHLIAEP L LIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL
Sbjct: 61  TDVFSVPGDFNLTLLDHLIAEPNLKLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 120

Query: 119 SVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCFQAVV 178
           SVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDF+QELRCFQ VTCFQAV+
Sbjct: 121 SVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAVTCFQAVI 180

Query: 179 NNLEDAHEQIDTAISTALKESKPVYLSVSCNLPGIPHPTFSREPVPF 225
           NNLE+AHE IDTAISTALKESKPVY+S+SCNLP IP PTFSR PVPF
Sbjct: 181 NNLEEAHELIDTAISTALKESKPVYISISCNLPAIPLPTFSRHPVPF 227


>AT5G01330.1 | Symbols: PDC3 | PDC3 (pyruvate decarboxylase-3);
           carboxy-lyase/ catalytic/ magnesium ion binding /
           pyruvate decarboxylase/ thiamin pyrophosphate binding /
           transferase | chr5:132538-134807 REVERSE
          Length = 592

 Score =  345 bits (886), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 170/212 (80%), Positives = 189/212 (89%), Gaps = 4/212 (1%)

Query: 17  DLCSPPNSTVSTIQGSVSPTFHT---PPDSTLGRHLARRLVQIGVSDVFSVPGDFNLTLL 73
           D+ S P++ V+TIQ S +PT  T      +TLGRHL+RRLVQ GV+D+F+VPGDFNL+LL
Sbjct: 2   DVRSLPSNGVATIQDS-APTAATILGSSAATLGRHLSRRLVQAGVTDIFTVPGDFNLSLL 60

Query: 74  DHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLP 133
           D LIA P LN IGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLP
Sbjct: 61  DQLIANPELNNIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLP 120

Query: 134 VICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCFQAVVNNLEDAHEQIDTAIS 193
           VICIVGGPNSND+GTNRILHHTIGLPDFSQELRCFQTVTC+QAVVN+LEDAHEQID AI+
Sbjct: 121 VICIVGGPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNHLEDAHEQIDKAIA 180

Query: 194 TALKESKPVYLSVSCNLPGIPHPTFSREPVPF 225
           TAL+ESKPVY+S+SCNL  IPHPTF+  PVPF
Sbjct: 181 TALRESKPVYISISCNLAAIPHPTFASYPVPF 212