Jatropha Genome Database

JcCB0098751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0098751.10 + phase: 1 /TE
         (1323 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   219   7e-57
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    82   3e-15
ATMG00710.1 | Symbols: ORF120 | hypothetical protein | chrM:2075...    79   2e-14
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...    70   1e-11
ATMG00300.1 | Symbols: ORF145A | hypothetical protein | chrM:896...    67   6e-11
AT4G00980.1 | Symbols:  | zinc knuckle (CCHC-type) family protei...    53   1e-06

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  219 bits (559), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 195/347 (56%), Gaps = 20/347 (5%)

Query: 800  ILISDEGEPESFQDVQSCKDRDCWRKAMQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYK 859
            + I+   EP ++ +    K+   W  AM +E+ +++   T+E   LP  K+ +  KWVYK
Sbjct: 78   VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134

Query: 860  LKKD-DGNLVRYKARLVVKGFTQKKGIDFDEIFSPVVKMSSIRVVLGLVANLNLELEQLD 918
            +K + DG + RYKARLV KG+TQ++GIDF E FSPV K++S++++L + A  N  L QLD
Sbjct: 135  IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194

Query: 919  VKTAFLHGDLEEEIYMEQPEGFKVKGKEDM----VCRLKKSLYGLKQAPRQWYKSFDSFM 974
            +  AFL+GDL+EEIYM+ P G+  +  + +    VC LKKS+YGLKQA RQW+  F   +
Sbjct: 195  ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254

Query: 975  VNQGYKRTDADPCVYVQKFSDGKFIILLLYVDDMLIVGPDAHMISKLKSDLSKAFDMKDL 1034
            +  G+ ++ +D   Y  K +   F+ +L+YVDD++I   +   + +LKS L   F ++DL
Sbjct: 255  IGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313

Query: 1035 GSARRILRMEIIRDRKSCKLWLSQEKYIERVLERFNMKNAKSVSTPLAAHFKLSKKSYPS 1094
            G  +  L +EI   R +  + + Q KY   +L+   +   K  S P+      S  S   
Sbjct: 314  GPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHS--- 368

Query: 1095 TEKEKGDMSNV-PYSSAIRSLMYAMVCTKPAIAHAVGVVSRFLSNPR 1140
                 GD  +   Y   I  LMY  + T+  I+ AV  +S+F   PR
Sbjct: 369  ----GGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPR 410


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 4/119 (3%)

Query: 795 RSSDYILISDEGEPESFQDVQSCKDRDCWRKAMQEEMNSLKKNDTYEPVKLPKGKRTLKN 854
           + S  I  + + EP+S   + + KD   W +AMQEE+++L +N T+  V  P  +  L  
Sbjct: 15  KYSLTITTTIKKEPKSV--IFALKDPG-WCQAMQEELDALSRNKTWILVPPPVNQNILGC 71

Query: 855 KWVYKLK-KDDGNLVRYKARLVVKGFTQKKGIDFDEIFSPVVKMSSIRVVLGLVANLNL 912
           KWV+K K   DG L R KARLV KGF Q++GI F E +SPVV+ ++IR +L +   L +
Sbjct: 72  KWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130


>ATMG00710.1 | Symbols: ORF120 | hypothetical protein |
           chrM:207553-207915 REVERSE
          Length = 120

 Score = 79.3 bits (194), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 1/79 (1%)

Query: 582 MNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSH 641
           MNRTIIE+VRSML    LPK F  +A NTAV++IN  PS  ++F +P++VW     +YS+
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 642 LRVFGFKAFMHVPKEQRLK 660
           LR FG  A++H   E +LK
Sbjct: 61  LRRFGCVAYIHC-DEGKLK 78


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 14/143 (9%)

Query: 999  IILLLYVDDMLIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQ 1058
            + LLLYVDD+L+ G    +++ L   LS  F MKDLG     L ++I        L+LSQ
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQ 58

Query: 1059 EKYIERVLERFNMKNAKSVSTPLAAHF--KLSKKSYPSTEKEKGDMSNVPYSSAIRSLMY 1116
             KY E++L    M + K +STPL       +S   YP       D S+  + S + +L Y
Sbjct: 59   TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-------DPSD--FRSIVGALQY 109

Query: 1117 AMVCTKPAIAHAVGVVSRFLSNP 1139
             +  T+P I++AV +V + +  P
Sbjct: 110  -LTLTRPDISYAVNIVCQRMHEP 131


>ATMG00300.1 | Symbols: ORF145A | hypothetical protein |
           chrM:89617-90054 REVERSE
          Length = 145

 Score = 67.4 bits (163), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 6/117 (5%)

Query: 376 GNWKLTKGSLVVARGKLCCSLYKTHTIICAGQLN---TVADDASPNLWHRRLAHVSERGL 432
           G  K+ KG   + +G    SLY     +  G+ N   T  D+    LWH RLAH+S+RG+
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDET--RLWHSRLAHMSQRGM 84

Query: 433 NMLAKKSLIPLAK-GKTNPCDYCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEV 488
            +L KK  +  +K      C+ C++GK HRV+F        N L+ VHSD+ G   V
Sbjct: 85  ELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSV 141


>AT4G00980.1 | Symbols:  | zinc knuckle (CCHC-type) family protein |
           chr4:422732-424580 REVERSE
          Length = 488

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 10/207 (4%)

Query: 78  KDPQVLWKKLENMYEATNAQGKVFMMHKVMNLKLSEGRSITQHLNDFEGLVTELAVSGMS 137
           K  + LW +L+ +Y+   ++ K   + K +  ++ E R I + +  F  +   +  +GM 
Sbjct: 281 KHAKELWDELKWVYQCDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMF 340

Query: 138 LEDEMQACLLLGSLPDSWDTLVVSLSNSAPNGV-VTMSMVKXXXXXXXXXXXDV----AS 192
           L++      ++   P SW      L       V + M  VK            V    A+
Sbjct: 341 LDEAFHVSTIISKFPPSWRGFCTRLMEEEYLPVWMLMERVKAEEELLRNGAKGVTYRPAT 400

Query: 193 TSSQALVTENRGRSKSRGPRHVKSGGRSKSREMR---KCYHCGKEGHLKRNCRLFKQDNA 249
            SSQ   T + G +  RG + V    +   R+ R    C +CG++GHL ++C   K D  
Sbjct: 401 GSSQMERTPSLG-TTHRGSQSVGWKRKEPERDERVIIVCDNCGRKGHLAKHCWGSKSDER 459

Query: 250 DRRQENDRNTSATVSGVDGEVTLVTHD 276
              + N R  S+  + V+ E    T++
Sbjct: 460 ASGKSN-RINSSVAAPVESETQATTNN 485