Jatropha Genome Database

JcCB0097471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0097471.10 + phase: 0 
         (511 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45300.1 | Symbols:  | 3-phosphoshikimate 1-carboxyvinyltrans...   766   0.0  
AT1G48860.1 | Symbols:  | 3-phosphoshikimate 1-carboxyvinyltrans...   751   0.0  
AT1G48860.2 | Symbols:  | 3-phosphoshikimate 1-carboxyvinyltrans...   735   0.0  

>AT2G45300.1 | Symbols:  | 3-phosphoshikimate
           1-carboxyvinyltransferase /
           5-enolpyruvylshikimate-3-phosphate / EPSP synthase |
           chr2:18677518-18679868 FORWARD
          Length = 520

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/514 (74%), Positives = 426/514 (82%), Gaps = 9/514 (1%)

Query: 3   LKNNYAFPNLSKPQRPKSLPSVSFKSQFH--GSPISRGLIQCQRRGDCTV--RMGSIRVS 58
           ++N     NLSK  + KS  SVS K+Q H    PIS      ++ G   +   +  ++V 
Sbjct: 11  VQNPSLISNLSKSSQRKSPLSVSLKTQQHPRAYPISSSW-GLKKSGMTLIGSELRPLKVM 69

Query: 59  ASVATAEKPSTVPEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLLNSDD 118
           +SV+TAEK S   EIVLQPI+EISG +KLPGSKSLSNRILLLAALSEGTTVVDNLLNSDD
Sbjct: 70  SSVSTAEKAS---EIVLQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVDNLLNSDD 126

Query: 119 VRYMLGALRTLGLHVEDNSELKQAIVGGCGGYFPVGKESKDDIELFLGNAGTAMRPLTAA 178
           + YML AL+ LGL+VE +SE  +A+V GCGG FP   +SK DIEL+LGNAGTAMRPLTAA
Sbjct: 127 INYMLDALKRLGLNVETDSENNRAVVEGCGGIFPASIDSKSDIELYLGNAGTAMRPLTAA 186

Query: 179 VTAAGGNSSYILDGVPRMRERPIGDLVVGLKQLGADVACS-PTNCPPVRVNAKGGLPGGK 237
           VTAAGGN+SY+LDGVPRMRERPIGDLVVGLKQLGADV C+  TNCPPVRVNA GGLPGGK
Sbjct: 187 VTAAGGNASYVLDGVPRMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGK 246

Query: 238 VKLSGSISSQYXXXXXXXXXXXXGDVEIEIIDKLISIPYVEMTLKLMERYGVNVEHSGSW 297
           VKLSGSISSQY            GDVEIEI+DKLIS+PYVEMTLKLMER+GV+VEHS SW
Sbjct: 247 VKLSGSISSQYLTALLMSAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSVEHSDSW 306

Query: 298 DRFFIRGGQKYRSPGNSYVEGDASSASYFLXXXXXXXXXXXVEGCGTSSLQGDVKFAEVL 357
           DRFF++GGQKY+SPGN+YVEGDASSASYFL           VEGCGT+SLQGDVKFAEVL
Sbjct: 307 DRFFVKGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVL 366

Query: 358 EKMGAKVTWTENSVTVTGPPRNSPSQKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIR 417
           EKMG KV+WTENSVTVTGPPR++   +HLRA+DVNMNKMPDVAMTLAVVALFADGPT IR
Sbjct: 367 EKMGCKVSWTENSVTVTGPPRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGPTTIR 426

Query: 418 DVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVAEIDTYDDHRMAMAFS 477
           DVASWRVKETERMIAICTELRKLGATVEEG DYCVITPP+K+  AEIDTYDDHRMAMAFS
Sbjct: 427 DVASWRVKETERMIAICTELRKLGATVEEGSDYCVITPPKKVKTAEIDTYDDHRMAMAFS 486

Query: 478 LAACGDVPVTIKDPGCTRKTFPDYFEVLERFTKH 511
           LAAC DVP+TI DPGCTRKTFPDYF+VLER TKH
Sbjct: 487 LAACADVPITINDPGCTRKTFPDYFQVLERITKH 520


>AT1G48860.1 | Symbols:  | 3-phosphoshikimate
           1-carboxyvinyltransferase, putative /
           5-enolpyruvylshikimate-3-phosphate, putative / EPSP
           synthase, putative | chr1:18068892-18071331 REVERSE
          Length = 521

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/458 (79%), Positives = 399/458 (87%), Gaps = 4/458 (0%)

Query: 55  IRVSASVATAEKPSTVPEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLL 114
           ++V ASV+TAEK S   EIVLQPI+EISG +KLPGSKSLSNRILLLAALSEGTTVVDNLL
Sbjct: 67  VKVRASVSTAEKAS---EIVLQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVDNLL 123

Query: 115 NSDDVRYMLGALRTLGLHVEDNSELKQAIVGGCGGYFPVGKESKDDIELFLGNAGTAMRP 174
           NSDD+ YML AL+ LGL+VE +SE  +A+V GCGG FP   +SK DIEL+LGNAGTAMRP
Sbjct: 124 NSDDINYMLDALKILGLNVETHSENNRAVVEGCGGVFPASIDSKSDIELYLGNAGTAMRP 183

Query: 175 LTAAVTAAGGNSSYILDGVPRMRERPIGDLVVGLKQLGADVACS-PTNCPPVRVNAKGGL 233
           LTAAVTAAGGN+SY+LDGVPRMRERPIGDLVVGLKQLGADV C+  TNCPPVRVNA GGL
Sbjct: 184 LTAAVTAAGGNASYVLDGVPRMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGL 243

Query: 234 PGGKVKLSGSISSQYXXXXXXXXXXXXGDVEIEIIDKLISIPYVEMTLKLMERYGVNVEH 293
           PGGKVKLSGSISSQY            GDVEIEI+DKLIS+PYVEMTLKLMER+GV+ EH
Sbjct: 244 PGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSAEH 303

Query: 294 SGSWDRFFIRGGQKYRSPGNSYVEGDASSASYFLXXXXXXXXXXXVEGCGTSSLQGDVKF 353
           S SWDRFF++GGQKY+SPGN+YVEGDASSASYFL           VEGCGT+SLQGDVKF
Sbjct: 304 SESWDRFFVKGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKF 363

Query: 354 AEVLEKMGAKVTWTENSVTVTGPPRNSPSQKHLRAVDVNMNKMPDVAMTLAVVALFADGP 413
           AEVLEKMG KV+WTENSVTVTGP R++   +HLRA+DVNMNKMPDVAMTLAVVALFADGP
Sbjct: 364 AEVLEKMGCKVSWTENSVTVTGPSRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGP 423

Query: 414 TAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVAEIDTYDDHRMA 473
           T IRDVASWRVKETERMIAICTELRKLGATVEEG DYCVITPP+K+  AEIDTYDDHRMA
Sbjct: 424 TTIRDVASWRVKETERMIAICTELRKLGATVEEGSDYCVITPPKKVKPAEIDTYDDHRMA 483

Query: 474 MAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERFTKH 511
           MAFSLAAC DVP+TI DPGCTRKTFPDYF+VLER TKH
Sbjct: 484 MAFSLAACADVPITINDPGCTRKTFPDYFQVLERITKH 521


>AT1G48860.2 | Symbols:  | 3-phosphoshikimate
           1-carboxyvinyltransferase, putative /
           5-enolpyruvylshikimate-3-phosphate, putative / EPSP
           synthase, putative | chr1:18068892-18071074 REVERSE
          Length = 489

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/483 (75%), Positives = 399/483 (82%), Gaps = 29/483 (6%)

Query: 55  IRVSASVATAEKPSTVPEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLL 114
           ++V ASV+TAEK S   EIVLQPI+EISG +KLPGSKSLSNRILLLAALSEGTTVVDNLL
Sbjct: 10  VKVRASVSTAEKAS---EIVLQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVDNLL 66

Query: 115 NSDDVRYMLGALRTLGLHVEDNSELKQAIVGGCGGYFPVGKESKDDIELFLGNAGTAMRP 174
           NSDD+ YML AL+ LGL+VE +SE  +A+V GCGG FP   +SK DIEL+LGNAGTAMRP
Sbjct: 67  NSDDINYMLDALKILGLNVETHSENNRAVVEGCGGVFPASIDSKSDIELYLGNAGTAMRP 126

Query: 175 LTAAVTAAGGNSSYILDGVPRMRERPIGDLVVGLKQLGADVACS-PTNCPPVRVNAKGGL 233
           LTAAVTAAGGN+SY+LDGVPRMRERPIGDLVVGLKQLGADV C+  TNCPPVRVNA GGL
Sbjct: 127 LTAAVTAAGGNASYVLDGVPRMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGL 186

Query: 234 PGGKVKLSGSISSQYXXXXXXXXXXXXGDVEIEIIDKLISIPYVEMTLKLMERYGVNVEH 293
           PGGKVKLSGSISSQY            GDVEIEI+DKLIS+PYVEMTLKLMER+GV+ EH
Sbjct: 187 PGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSAEH 246

Query: 294 SGSWDRFFIRGGQKYRSPGNSYVEGDASSASYFLXXXXXXXXXXXVEGCGTSSLQGDVKF 353
           S SWDRFF++GGQKY+SPGN+YVEGDASSASYFL           VEGCGT+SLQGDVKF
Sbjct: 247 SESWDRFFVKGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKF 306

Query: 354 AEVLEKMGAKVTWTENSVTVTGPPRNSPSQKHLRAVDVNMNKMPDVAMTLAVVALFADGP 413
           AEVLEKMG KV+WTENSVTVTGP R++   +HLRA+DVNMNKMPDVAMTLAVVALFADGP
Sbjct: 307 AEVLEKMGCKVSWTENSVTVTGPSRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGP 366

Query: 414 TAIRDVASWRVKETERMIAICTELRK-------------------------LGATVEEGP 448
           T IRDVASWRVKETERMIAICTELRK                         LGATVEEG 
Sbjct: 367 TTIRDVASWRVKETERMIAICTELRKVKFFFSLSLSVYSAHSKKFCGICVQLGATVEEGS 426

Query: 449 DYCVITPPEKLNVAEIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERF 508
           DYCVITPP+K+  AEIDTYDDHRMAMAFSLAAC DVP+TI DPGCTRKTFPDYF+VLER 
Sbjct: 427 DYCVITPPKKVKPAEIDTYDDHRMAMAFSLAACADVPITINDPGCTRKTFPDYFQVLERI 486

Query: 509 TKH 511
           TKH
Sbjct: 487 TKH 489