Jatropha Genome Database

JcCB0097441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0097441.10 - phase: 2 /pseudo/partial
         (229 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14850.1 | Symbols:  | mannosyltransferase, putative | chr5:4...   161   3e-40
AT5G14850.2 | Symbols:  | mannosyltransferase, putative | chr5:4...   161   3e-40

>AT5G14850.1 | Symbols:  | mannosyltransferase, putative |
           chr5:4802099-4804977 REVERSE
          Length = 548

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 84/132 (63%), Positives = 95/132 (71%), Gaps = 5/132 (3%)

Query: 76  GDYYGTHKWHWYFSQGFSAMLFTFLPFAIAGSIKSKCWKLSGLIAWVLIVYSILGHKEFR 135
           GDYYGTH WHWYF+QGF  MLFTF PF+IAG IKSK  KLS LI WVL +YSILGHKEFR
Sbjct: 282 GDYYGTHPWHWYFTQGFLVMLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHKEFR 341

Query: 136 FVLPVLPVALIFSGYALSVMA-----RPDSPNGDRKGSSKSHNKCLSKVGFAVIFLLCTN 190
           FVLPVLP+ALIFSGYA + M         S    ++   ++H K   K+  +V FLL TN
Sbjct: 342 FVLPVLPIALIFSGYAFAQMEVSGSSSSSSVTKKKQVPRQNHTKWSPKLRLSVYFLLATN 401

Query: 191 IPMALYMSLVHQ 202
           IPMALYMSL HQ
Sbjct: 402 IPMALYMSLFHQ 413


>AT5G14850.2 | Symbols:  | mannosyltransferase, putative |
           chr5:4802155-4804977 REVERSE
          Length = 529

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 84/132 (63%), Positives = 95/132 (71%), Gaps = 5/132 (3%)

Query: 76  GDYYGTHKWHWYFSQGFSAMLFTFLPFAIAGSIKSKCWKLSGLIAWVLIVYSILGHKEFR 135
           GDYYGTH WHWYF+QGF  MLFTF PF+IAG IKSK  KLS LI WVL +YSILGHKEFR
Sbjct: 282 GDYYGTHPWHWYFTQGFLVMLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHKEFR 341

Query: 136 FVLPVLPVALIFSGYALSVMA-----RPDSPNGDRKGSSKSHNKCLSKVGFAVIFLLCTN 190
           FVLPVLP+ALIFSGYA + M         S    ++   ++H K   K+  +V FLL TN
Sbjct: 342 FVLPVLPIALIFSGYAFAQMEVSGSSSSSSVTKKKQVPRQNHTKWSPKLRLSVYFLLATN 401

Query: 191 IPMALYMSLVHQ 202
           IPMALYMSL HQ
Sbjct: 402 IPMALYMSLFHQ 413