Jatropha Genome Database
- JcCB0097241.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0097241.20 - phase: 2 /partial
(441 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64720.1 | Symbols: CP5 | CP5 | chr1:24046887-24048537 REVERSE 540 e-154
AT5G54170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 421 e-118
AT4G14500.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 385 e-107
AT3G23080.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 374 e-104
AT3G23080.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 350 1e-96
AT4G14500.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 201 9e-52
AT3G13062.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 154 1e-37
AT3G13062.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 153 2e-37
AT3G13062.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 147 1e-35
AT1G55960.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 145 5e-35
>AT1G64720.1 | Symbols: CP5 | CP5 | chr1:24046887-24048537 REVERSE
Length = 385
Score = 540 bits (1390), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/408 (65%), Positives = 309/408 (75%), Gaps = 40/408 (9%)
Query: 34 AELVMFMAPLWIAVIIGVLVGWAWKPKWANLGRELLDSSVNKDSANTVPSPASSSIPTLN 93
++L++F+APLWIAV GVLVGW W+PKWA L +LL +S P
Sbjct: 18 SDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNS-----------------PKF- 59
Query: 94 SLKFQLPSCISWIADDGIQKXXXXXXXXXXXXXXXKQSQKESSGIVNEDDLEHLCKLVEE 153
L QLP+ I + + S KE +G V +DD HL KLVE
Sbjct: 60 -LNLQLPTSILKTSSHHVNPSL---------------SSKEKTGFVTDDDFRHLWKLVEV 103
Query: 154 KDGGPAWIQMMDRSTPTMSYKAWRRDPENGPPQYRSSTVFEDATPEMVRDFFWDDEFRMK 213
KDGGP WIQMMDRSTPT SY+AWRRDPENGPPQYRS TVFEDATPEMVRDFFWDDEFR K
Sbjct: 104 KDGGPCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPEMVRDFFWDDEFRSK 163
Query: 214 WDDMLIHAATLEECPTTGTMIVQWVRKFPFFCSDREYIIGRRIWESGRLYYCVTKGVPCM 273
WDDML++++TLE C TGTM+VQWVRKFPFFCSDREYIIGRRIW++GR++YC+TKGV
Sbjct: 164 WDDMLLYSSTLERCKDTGTMVVQWVRKFPFFCSDREYIIGRRIWDAGRVFYCITKGVQYP 223
Query: 274 SVPRRNKPRRVDLYYSSWCVRAVESKRGDGQLTACEVLLFHHEDMGIPWEIAKLGVRQGM 333
SVPR+NKPRRVDLYYSSWC+RAVESKRGDG++T+CEVLLFHHEDMGIPWEIAKLGVRQGM
Sbjct: 224 SVPRQNKPRRVDLYYSSWCIRAVESKRGDGEMTSCEVLLFHHEDMGIPWEIAKLGVRQGM 283
Query: 334 WGAVKKIEPGLRAYQKQRAAGDPLSRCAFMAQINTKVSADYLRSLESNANSSLEAATQDS 393
WGAVKKIEPGLRAYQ+ +AAG LS A MA INTKVSA+ N S+ T D
Sbjct: 284 WGAVKKIEPGLRAYQRAKAAGAGLSPSAIMAHINTKVSAEEF----MNERGSIAEVTGD- 338
Query: 394 SKKSGGNIPRMLVLGGAIALACTLDRGLLTKAVIFGVARRFAKIGRRL 441
K +G NIP++LV+GGAIALACTLD+GLLTKAVIFGVARRFA++G+R+
Sbjct: 339 -KPTGKNIPKILVVGGAIALACTLDKGLLTKAVIFGVARRFARMGKRM 385
>AT5G54170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to wounding; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein
match is: CP5 (TAIR:AT1G64720.1); Has 233 Blast hits to
233 proteins in 57 species: Archae - 0; Bacteria - 0;
Metazoa - 142; Fungi - 0; Plants - 80; Viruses - 0;
Other Eukaryotes - 11 (source: NCBI BLink). |
chr5:21985056-21987039 REVERSE
Length = 449
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 277/443 (62%), Gaps = 46/443 (10%)
Query: 32 IVAELVMFMAPLWIAVIIGVLVGWAWKPKWANLGRELLDSSVNKDSANTVPSPAS----- 86
++ +++ + W+A +IG+++GWAWKP+W + SS N+ +P S
Sbjct: 3 LLESIILGLITGWLAFVIGLVIGWAWKPRW-------VSSSNNRQVKLQCSAPRSFDLSL 55
Query: 87 ----------------SSIPTLNSLKFQLPSCISWIADDGIQKXXXXX----------XX 120
S P L +L C +W Q+
Sbjct: 56 PSSSPSSVVTSPLKGFGSAPCLKAL-----VCDTWTMALRQQRQTVSPDSSSSSYDSSEQ 110
Query: 121 XXXXXXXXKQSQKESSGIVNEDDLEHLCKLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDP 180
K++++ V E DL HL +LVE KDGG AWIQMMDR TP M Y+AW R+P
Sbjct: 111 HLDLVSRVKKTKERLPNTVTELDLRHLVQLVERKDGGQAWIQMMDRFTPGMRYQAWLREP 170
Query: 181 ENGPPQYRSSTVFEDATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRK 240
+NGP +YRS TVFEDATP M+RDFFWDDEFR WD ML ++ T+EECP+TGTMIV+W+RK
Sbjct: 171 KNGPTEYRSRTVFEDATPVMLRDFFWDDEFRPTWDTMLSNSTTVEECPSTGTMIVRWIRK 230
Query: 241 FPFFCSDREYIIGRRIWESGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKR 300
FPFFCSDREY+IGRRIW G YYCVTKGV S+P NK +RVDL+YSSWC+R VES+R
Sbjct: 231 FPFFCSDREYVIGRRIWNCGNSYYCVTKGVSVPSIPPNNKQKRVDLFYSSWCIRPVESRR 290
Query: 301 GDGQLTACEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQKQRAA--GDPLS 358
DG +ACEVLLFHHEDMGIP EIAKLGV++GMWGAVKK+EPGLRAYQ R + G LS
Sbjct: 291 DDGVTSACEVLLFHHEDMGIPREIAKLGVKRGMWGAVKKMEPGLRAYQTHRLSDGGTKLS 350
Query: 359 RCAFMAQINTKVSADYLRSLESNANSSLEAATQDSSKKSGGNIPRMLVLGGAIALACTLD 418
R AFMAQINTK++ D+L SL + A+ E + N+ ++L++GGA+A+ C+L
Sbjct: 351 RSAFMAQINTKITQDHLISLSNGASPVTETPVTLNQGNRAANLKKLLIIGGAVAVVCSLS 410
Query: 419 RG-LLTKAVIFGVARRFAKIGRR 440
G + A + G +RF GR+
Sbjct: 411 GGAFVPPAFLLGFGKRFVNGGRK 433
>AT4G14500.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G23080.1); Has 257
Blast hits to 256 proteins in 63 species: Archae - 0;
Bacteria - 0; Metazoa - 167; Fungi - 0; Plants - 83;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
| chr4:8334391-8337022 FORWARD
Length = 433
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/427 (47%), Positives = 266/427 (62%), Gaps = 12/427 (2%)
Query: 20 LLDILNRPTIGDIVAELVMFMAPLWIAVIIGVLVGWAWKPKWANLGRELLDSSVNKDSAN 79
LL+ P+ + ++++ P+W+AV+IG+L+GW+W+P+W L S +
Sbjct: 8 LLNFFKNPSFTETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLIYLGFRSKLRFLWTA 67
Query: 80 TVPSPASSSIPTLNSLK-FQLPSCISWIADDGIQKXXXXXXXXXXXXXXXKQSQKESSG- 137
A +L F + I D K +S S G
Sbjct: 68 PPGFGARRLWLAFTALSAFSVCRTIWSRNDTRANKSATGSASSQTPVEDNDESGLASRGS 127
Query: 138 --------IVNEDDLEHLCKLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDPENGPPQYRS 189
IV E+DLEHL +L+E + W MMD++TP MSY+AWR +PE GP YRS
Sbjct: 128 DNGTVTEDIVTENDLEHLLQLLEVGNAALEWQSMMDKTTPNMSYQAWRHEPETGPVIYRS 187
Query: 190 STVFEDATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFPFFCSDRE 249
TVFEDATP++VRDFFWDDEFR KWD ML + TLEE TGTMIVQW +KFPFFCSDRE
Sbjct: 188 RTVFEDATPDIVRDFFWDDEFRPKWDFMLANFKTLEEDTQTGTMIVQWRKKFPFFCSDRE 247
Query: 250 YIIGRRIWESGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKRGDGQLTACE 309
YIIGRRIWESG+ YYCVTKGVP ++P+R+KPRRV+LY+SSW +RAVES++GDGQ TACE
Sbjct: 248 YIIGRRIWESGKKYYCVTKGVPYPALPKRDKPRRVELYFSSWVIRAVESRKGDGQQTACE 307
Query: 310 VLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQKQRAAGDPLSRCAFMAQINTK 369
V L H+EDMGIP ++AKLGVR GMWGAVKK+ GLRAYQ R + LSR A MA+I TK
Sbjct: 308 VSLVHYEDMGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSARKSDSSLSRIAQMARITTK 367
Query: 370 VSADYLRSLESNANSSLEAATQDSSKKSGGNIPRMLVLGGAIALACTLDRGLLTKAVIFG 429
++ D S S+ + A + + ++ + V+ G +ALAC L G++ KA++ G
Sbjct: 368 LNMDSAES--SSRDEDRSRAMEYARQRDHLRMDWKWVVVGGVALACGLHSGIIGKALLAG 425
Query: 430 VARRFAK 436
+R A+
Sbjct: 426 AGQRLAR 432
>AT3G23080.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G14500.1); Has 247
Blast hits to 246 proteins in 61 species: Archae - 0;
Bacteria - 0; Metazoa - 162; Fungi - 0; Plants - 82;
Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
| chr3:8207612-8209181 REVERSE
Length = 419
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/418 (45%), Positives = 256/418 (61%), Gaps = 2/418 (0%)
Query: 19 ILLDILNRPTIGDIVAELVMFMAPLWIAVIIGVLVGWAWKPKWANLGRELLDSSVNKDSA 78
I +D N+P++ + ++++ P+W+ V+IG+L+GW+W+P+W +L S +
Sbjct: 3 IFMDFFNKPSVTETFVDVLLCAVPIWVTVMIGLLIGWSWRPRWTSLVYLGFRSKLR--FL 60
Query: 79 NTVPSPASSSIPTLNSLKFQLPSCISWIADDGIQKXXXXXXXXXXXXXXXKQSQKESSGI 138
TVP + L S S + + ++ +
Sbjct: 61 CTVPPGFGARRIWLAFTALSAFSVCSTSNKSSVNNGSSKPVEEEAFSRASDKVTEKEKDV 120
Query: 139 VNEDDLEHLCKLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDPENGPPQYRSSTVFEDATP 198
V E DLEHL L+E + W MMD+STP MSY+AWR +PE GP YRS TVFED TP
Sbjct: 121 VTEKDLEHLLHLLEAGNASFEWQSMMDKSTPNMSYQAWRHEPEIGPVVYRSRTVFEDVTP 180
Query: 199 EMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFPFFCSDREYIIGRRIWE 258
++VRDFFWDDEFR KWD ML + TLEE P TGT IV W++KFPFFCSDREYIIGRRIWE
Sbjct: 181 DIVRDFFWDDEFRPKWDTMLAYFKTLEEDPKTGTTIVHWIKKFPFFCSDREYIIGRRIWE 240
Query: 259 SGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKRGDGQLTACEVLLFHHEDM 318
SGR YY VTKGVP ++ +R+KPRRV+LY+SSW + AVES++GDGQ+TACEV L H+EDM
Sbjct: 241 SGRKYYAVTKGVPYKALSKRDKPRRVELYFSSWIINAVESRKGDGQMTACEVSLVHYEDM 300
Query: 319 GIPWEIAKLGVRQGMWGAVKKIEPGLRAYQKQRAAGDPLSRCAFMAQINTKVSADYLRSL 378
GIP ++AKLGVR GMWGAVKK+ GLRAYQ R G LSR A MA I TK++ D + +
Sbjct: 301 GIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSARKPGTSLSRSAQMASITTKLNMDLVETS 360
Query: 379 ESNANSSLEAATQDSSKKSGGNIPRMLVLGGAIALACTLDRGLLTKAVIFGVARRFAK 436
+ A + + ++ G +ALAC L + KA++ G +R A+
Sbjct: 361 GAEDEERGRAVENARKQNDQFGVDWKWIVVGGVALACGLHSSAIGKALMVGAGQRLAR 418
>AT3G23080.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G14500.1); Has 247 Blast hits to 246 proteins
in 61 species: Archae - 0; Bacteria - 0; Metazoa - 162;
Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes -
3 (source: NCBI BLink). | chr3:8207612-8209088 REVERSE
Length = 388
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/392 (48%), Positives = 244/392 (62%), Gaps = 8/392 (2%)
Query: 48 IIGVLVGWAWKPKWANLGRELLDSSVNKDSANTVPSPASSSIPTLNSLKFQLPSCISWIA 107
+IG+L+GW+W+P+W +L S + TVP + L S S
Sbjct: 1 MIGLLIGWSWRPRWTSLVYLGFRSKLR--FLCTVPPGFGARRIWLAFTALSAFSVCSTSN 58
Query: 108 DDGIQKXXXXXXXXXXXXXXXKQSQKESSGIVNEDDLEHLCKLVEEKDGGPAWIQMMDRS 167
+ + ++ +V E DLEHL L+E + W MMD+S
Sbjct: 59 KSSVNNGSSKPVEEEAFSRASDKVTEKEKDVVTEKDLEHLLHLLEAGNASFEWQSMMDKS 118
Query: 168 TPTMSYKAWRRDPENGPPQYRSSTVFEDATPEMVRDFFWDDEFRMKWDDMLIHAATLEEC 227
TP MSY+AWR +PE GP YRS TVFED TP++VRDFFWDDEFR KWD ML + TLEE
Sbjct: 119 TPNMSYQAWRHEPEIGPVVYRSRTVFEDVTPDIVRDFFWDDEFRPKWDTMLAYFKTLEED 178
Query: 228 PTTGTMIVQWVRKFPFFCSDREYIIGRRIWESGRLYYCVTKGVPCMSVPRRNKPRRVDLY 287
P TGT IV W++KFPFFCSDREYIIGRRIWESGR YY VTKGVP ++ +R+KPRRV+LY
Sbjct: 179 PKTGTTIVHWIKKFPFFCSDREYIIGRRIWESGRKYYAVTKGVPYKALSKRDKPRRVELY 238
Query: 288 YSSWCVRAVESKRGDGQLTACEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAY 347
+SSW + AVES++GDGQ+TACEV L H+EDMGIP ++AKLGVR GMWGAVKK+ GLRAY
Sbjct: 239 FSSWIINAVESRKGDGQMTACEVSLVHYEDMGIPKDVAKLGVRHGMWGAVKKLNSGLRAY 298
Query: 348 QKQRAAGDPLSRCAFMAQINTKVSADYLRSLESNANSSLEAATQDSSKKSGGNIP---RM 404
Q R G LSR A MA I TK++ D + + S A ++++K +
Sbjct: 299 QSARKPGTSLSRSAQMASITTKLNMDLVET--SGAEDEERGRAVENARKQNDQFGVDWKW 356
Query: 405 LVLGGAIALACTLDRGLLTKAVIFGVARRFAK 436
+V+GG +ALAC L + KA++ G +R A+
Sbjct: 357 IVVGG-VALACGLHSSAIGKALMVGAGQRLAR 387
>AT4G14500.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G23080.1). |
chr4:8334391-8336468 FORWARD
Length = 294
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 146/270 (54%), Gaps = 12/270 (4%)
Query: 20 LLDILNRPTIGDIVAELVMFMAPLWIAVIIGVLVGWAWKPKWANLGRELLDSSVNKDSAN 79
LL+ P+ + ++++ P+W+AV+IG+L+GW+W+P+W L S +
Sbjct: 8 LLNFFKNPSFTETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLIYLGFRSKLRFLWTA 67
Query: 80 TVPSPASSSIPTLNSLK-FQLPSCISWIADDGIQKXXXXXXXXXXXXXXXKQSQKESSG- 137
A +L F + I D K +S S G
Sbjct: 68 PPGFGARRLWLAFTALSAFSVCRTIWSRNDTRANKSATGSASSQTPVEDNDESGLASRGS 127
Query: 138 --------IVNEDDLEHLCKLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDPENGPPQYRS 189
IV E+DLEHL +L+E + W MMD++TP MSY+AWR +PE GP YRS
Sbjct: 128 DNGTVTEDIVTENDLEHLLQLLEVGNAALEWQSMMDKTTPNMSYQAWRHEPETGPVIYRS 187
Query: 190 STVFEDATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFP--FFCSD 247
TVFEDATP++VRDFFWDDEFR KWD ML + TLEE TGTMIVQW +K D
Sbjct: 188 RTVFEDATPDIVRDFFWDDEFRPKWDFMLANFKTLEEDTQTGTMIVQWRKKVSGLLILCD 247
Query: 248 REYIIGRRIWESGRLYYCVTKGVPCMSVPR 277
REYIIGRRIWESG+ YYCVTK P+
Sbjct: 248 REYIIGRRIWESGKKYYCVTKNSVGDKTPK 277
>AT3G13062.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55960.1); Has 235
Blast hits to 235 proteins in 48 species: Archae - 0;
Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 75;
Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
| chr3:4184777-4187268 FORWARD
Length = 440
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 162/315 (51%), Gaps = 19/315 (6%)
Query: 138 IVNEDDLEHLC-KLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDPENGPP-QYRSSTVFED 195
+V+++DL+ L KL E + W ++ +S P +SY A P +G P +Y S+TVFED
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTTVFED 142
Query: 196 ATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFPFFCSDREYIIGRR 255
+PE++RDF+ D+E+R +WD ++ L+ +G I + ++KFP + REY++ +
Sbjct: 143 CSPEVLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLL-TPREYVLAWK 201
Query: 256 IWESGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKRGDGQLTACEVLLFHH 315
+WE +YC K VP++ K RV + S W +R V + ACE+ + H
Sbjct: 202 LWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGR------NACEIHMVHQ 255
Query: 316 EDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAY--QKQRAAGDPLSRCAFMAQINTKVSAD 373
ED G+ E+AKL +G+W V K+E LR Y R G LS + M +I +++ +
Sbjct: 256 EDAGLNVEMAKLAFSRGIWSYVCKMENALRKYIATSHRPQGPTLSAVSLMKKIPSELESQ 315
Query: 374 YLRSLESNANSSLEAATQDSSKK-------SGGNIPR-MLVLGGAIALACTLDRGLLTKA 425
S+ ++ T + +K+ S I ML++GGA+ A L RG
Sbjct: 316 TDDITNSSGTTTSGMHTGEGAKRKKLLRKPSKKLIANGMLLVGGAVGGAICLSRGHSALG 375
Query: 426 VIFGVARRFAKIGRR 440
+A +K+ +R
Sbjct: 376 AKVALAYFLSKMRKR 390
>AT3G13062.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55960.1); Has 235
Blast hits to 235 proteins in 48 species: Archae - 0;
Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 75;
Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
| chr3:4184777-4186795 FORWARD
Length = 403
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 162/315 (51%), Gaps = 19/315 (6%)
Query: 138 IVNEDDLEHLC-KLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDPENGPP-QYRSSTVFED 195
+V+++DL+ L KL E + W ++ +S P +SY A P +G P +Y S+TVFED
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTTVFED 142
Query: 196 ATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFPFFCSDREYIIGRR 255
+PE++RDF+ D+E+R +WD ++ L+ +G I + ++KFP + REY++ +
Sbjct: 143 CSPEVLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLL-TPREYVLAWK 201
Query: 256 IWESGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKRGDGQLTACEVLLFHH 315
+WE +YC K VP++ K RV + S W +R V + ACE+ + H
Sbjct: 202 LWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGR------NACEIHMVHQ 255
Query: 316 EDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAY--QKQRAAGDPLSRCAFMAQINTKVSAD 373
ED G+ E+AKL +G+W V K+E LR Y R G LS + M +I +++ +
Sbjct: 256 EDAGLNVEMAKLAFSRGIWSYVCKMENALRKYIATSHRPQGPTLSAVSLMKKIPSELESQ 315
Query: 374 YLRSLESNANSSLEAATQDSSKK-------SGGNIPR-MLVLGGAIALACTLDRGLLTKA 425
S+ ++ T + +K+ S I ML++GGA+ A L RG
Sbjct: 316 TDDITNSSGTTTSGMHTGEGAKRKKLLRKPSKKLIANGMLLVGGAVGGAICLSRGHSALG 375
Query: 426 VIFGVARRFAKIGRR 440
+A +K+ +R
Sbjct: 376 AKVALAYFLSKMRKR 390
>AT3G13062.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55960.1); Has 230
Blast hits to 230 proteins in 44 species: Archae - 0;
Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 75;
Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
| chr3:4184777-4186795 FORWARD
Length = 411
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 161/323 (49%), Gaps = 27/323 (8%)
Query: 138 IVNEDDLEHLC-KLVEEKDGGPAWIQMMDRSTPTMSYKAWRRDP---------ENGPPQY 187
+V+++DL+ L KL E + W ++ +S P +SY A P + P +Y
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTVISKFYLCDGSPMKY 142
Query: 188 RSSTVFEDATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFPFFCSD 247
S+TVFED +PE++RDF+ D+E+R +WD ++ L+ +G I + ++KFP +
Sbjct: 143 LSTTVFEDCSPEVLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLL-TP 201
Query: 248 REYIIGRRIWESGRLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKRGDGQLTA 307
REY++ ++WE +YC K VP++ K RV + S W +R V + A
Sbjct: 202 REYVLAWKLWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPGR------NA 255
Query: 308 CEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAY--QKQRAAGDPLSRCAFMAQ 365
CE+ + H ED G+ E+AKL +G+W V K+E LR Y R G LS + M +
Sbjct: 256 CEIHMVHQEDAGLNVEMAKLAFSRGIWSYVCKMENALRKYIATSHRPQGPTLSAVSLMKK 315
Query: 366 INTKVSADYLRSLESNANSSLEAATQDSSKK-------SGGNIPR-MLVLGGAIALACTL 417
I +++ + S+ ++ T + +K+ S I ML++GGA+ A L
Sbjct: 316 IPSELESQTDDITNSSGTTTSGMHTGEGAKRKKLLRKPSKKLIANGMLLVGGAVGGAICL 375
Query: 418 DRGLLTKAVIFGVARRFAKIGRR 440
RG +A +K+ +R
Sbjct: 376 SRGHSALGAKVALAYFLSKMRKR 398
>AT1G55960.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G13062.2); Has 177
Blast hits to 177 proteins in 41 species: Archae - 0;
Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 73;
Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
| chr1:20927962-20929825 REVERSE
Length = 403
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 159/302 (52%), Gaps = 24/302 (7%)
Query: 130 QSQKESSGIVNEDDLEHLCKLVEEK--DGGPAWIQMMDRSTPTMSYKAWRRDPENG--PP 185
SQ S +V+++DL+ L + +EE+ D W ++ +S +SY A R P++G P
Sbjct: 74 NSQSRISKLVSDEDLKFLIENLEEETNDSTEIWEHVIHKSNDRISYSAKRCKPKDGGGPM 133
Query: 186 QYRSSTVFEDATPEMVRDFFWDDEFRMKWDDMLIHAATLEECPTTGTMIVQWVRKFPFFC 245
+Y S TVFE + E+VRDF+ D+++R WD ++ L+ TG I + ++KFP
Sbjct: 134 KYLSVTVFEGFSAEIVRDFYMDNDYRKLWDKTVVEHEQLQVDSNTGIEIGRTIKKFPLLT 193
Query: 246 SDREYIIGRRIWESG-RLYYCVTKGVPCMSVPRRNKPRRVDLYYSSWCVRAVESKRGDGQ 304
S REY++ R+W+ + +YC TK VP++ K RV + S W +R V +
Sbjct: 194 S-REYVLAWRLWQGKEKKFYCFTKECDHNMVPQQRKYVRVSYFRSGWRIRQVPGR----- 247
Query: 305 LTACEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAY--QKQRAAGDPLSRCAF 362
ACE+ +FH E+ G+ E+AKL +G+W V K+E L Y R G LS
Sbjct: 248 -NACEIKMFHQENAGLNVEMAKLAFSKGIWSYVCKMENALCKYIATSHRTQGPILSAVTL 306
Query: 363 MAQINTKVSA---DYLRSLESNAN----SSLEAATQDSS--KKSGGNIPRMLVL-GGAIA 412
M ++ +++ + S+E+++ S + AA Q K S I + LVL GGAI
Sbjct: 307 MKEVPSELETGTDNVTGSMETSSGEGVLSHVVAAKQKKKMRKPSTKLIAKGLVLVGGAIC 366
Query: 413 LA 414
L+
Sbjct: 367 LS 368