Jatropha Genome Database

JcCB0094931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0094931.10 - phase: 0 
         (140 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47080.1 | Symbols: CKB1 | CKB1; protein kinase regulator | c...   234   1e-62
AT4G17640.1 | Symbols: CKB2 | CKB2; protein kinase CK2 regulator...   233   3e-62
AT2G44680.2 | Symbols: CKB4 | CKB4 (CASEIN KINASE II BETA SUBUNI...   227   2e-60
AT2G44680.1 | Symbols: CKB4 | CKB4 (CASEIN KINASE II BETA SUBUNI...   227   2e-60
AT3G60250.2 | Symbols: CKB3 | CKB3; protein kinase regulator/ tr...   223   3e-59
AT3G60250.1 | Symbols: CKB3 | CKB3; protein kinase regulator/ tr...   223   4e-59
AT5G47080.2 | Symbols: CKB1 | CKB1; protein kinase regulator | c...   164   2e-41
AT5G47080.3 | Symbols: CKB1 | CKB1; protein kinase regulator | c...   164   2e-41

>AT5G47080.1 | Symbols: CKB1 | CKB1; protein kinase regulator |
           chr5:19124969-19126397 REVERSE
          Length = 287

 Score =  234 bits (597), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 110/135 (81%), Positives = 117/135 (86%), Gaps = 13/135 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           G+MFTEEQNEL+ESAAEMLYGLIH RYILT+KG+AAML+KYKNYDFGRCPRVYCCGQPCL
Sbjct: 153 GEMFTEEQNELIESAAEMLYGLIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCCGQPCL 212

Query: 79  PVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           PVGQSD+PRSSTVKIYCPK              IDGAYFGTTFPHLFLMTYGHLKP KA 
Sbjct: 213 PVGQSDLPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPAKAT 272

Query: 126 QSYVPRVFGFKLHKP 140
           Q+YV RVFGFKLHKP
Sbjct: 273 QNYVQRVFGFKLHKP 287


>AT4G17640.1 | Symbols: CKB2 | CKB2; protein kinase CK2 regulator |
           chr4:9825438-9826988 FORWARD
          Length = 282

 Score =  233 bits (594), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 108/135 (80%), Positives = 118/135 (87%), Gaps = 13/135 (9%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           G+MFTEEQNEL+ESAAEMLYG+IH R+ILT+KG+A+ML+KYKNYDFGRCPRVYCCGQPCL
Sbjct: 148 GEMFTEEQNELIESAAEMLYGMIHARFILTSKGLASMLDKYKNYDFGRCPRVYCCGQPCL 207

Query: 79  PVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           PVGQSDIPR+STVKIYCPK              IDGAYFGTTFPHLFLMTYGHLKPQKA+
Sbjct: 208 PVGQSDIPRASTVKIYCPKCEDVYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKAS 267

Query: 126 QSYVPRVFGFKLHKP 140
           QSY  RVFGFKLHKP
Sbjct: 268 QSYTQRVFGFKLHKP 282


>AT2G44680.2 | Symbols: CKB4 | CKB4 (CASEIN KINASE II BETA SUBUNIT
           4); protein serine/threonine kinase |
           chr2:18426898-18428166 REVERSE
          Length = 282

 Score =  227 bits (578), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 106/134 (79%), Positives = 117/134 (87%), Gaps = 12/134 (8%)

Query: 18  SGDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPC 77
           +GDMFTEEQ+E+VESAAEMLYGLIHVRYILTTKGMAAM+EKYKNYDFGRCPRV+CCGQ C
Sbjct: 147 NGDMFTEEQHEMVESAAEMLYGLIHVRYILTTKGMAAMMEKYKNYDFGRCPRVFCCGQSC 206

Query: 78  LPVGQSDIPRSSTVKIYCPK------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           LPVGQSDIPRSSTVKIYCPK             IDGAYFGTTFPHLFLM YG++KPQK A
Sbjct: 207 LPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQDIDGAYFGTTFPHLFLMAYGNMKPQKPA 266

Query: 126 QSYVPRVFGFKLHK 139
           Q+YVP++FGFK+H 
Sbjct: 267 QNYVPKIFGFKVHN 280


>AT2G44680.1 | Symbols: CKB4 | CKB4 (CASEIN KINASE II BETA SUBUNIT
           4); protein serine/threonine kinase |
           chr2:18426898-18428166 REVERSE
          Length = 283

 Score =  227 bits (578), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 106/135 (78%), Positives = 117/135 (86%), Gaps = 13/135 (9%)

Query: 18  SGDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPC 77
           +GDMFTEEQ+E+VESAAEMLYGLIHVRYILTTKGMAAM+EKYKNYDFGRCPRV+CCGQ C
Sbjct: 147 NGDMFTEEQHEMVESAAEMLYGLIHVRYILTTKGMAAMMEKYKNYDFGRCPRVFCCGQSC 206

Query: 78  LPVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKA 124
           LPVGQSDIPRSSTVKIYCPK              IDGAYFGTTFPHLFLM YG++KPQK 
Sbjct: 207 LPVGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMAYGNMKPQKP 266

Query: 125 AQSYVPRVFGFKLHK 139
           AQ+YVP++FGFK+H 
Sbjct: 267 AQNYVPKIFGFKVHN 281


>AT3G60250.2 | Symbols: CKB3 | CKB3; protein kinase regulator/
           transcription factor binding | chr3:22270714-22271962
           REVERSE
          Length = 275

 Score =  223 bits (568), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 106/135 (78%), Positives = 116/135 (85%), Gaps = 12/135 (8%)

Query: 18  SGDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPC 77
           + +MFT+EQ+E+VESAAEMLYGLIHVRYILTTKGMAAM EKYKN DFGRCPRV+CCGQ C
Sbjct: 141 NSEMFTDEQHEMVESAAEMLYGLIHVRYILTTKGMAAMTEKYKNCDFGRCPRVFCCGQSC 200

Query: 78  LPVGQSDIPRSSTVKIYCPK------------YIDGAYFGTTFPHLFLMTYGHLKPQKAA 125
           LPVGQSDIPRSSTVKIYCPK             IDGAYFGTTFPHLFLMTYG+LKPQK  
Sbjct: 201 LPVGQSDIPRSSTVKIYCPKCEDISYPRSKFQDIDGAYFGTTFPHLFLMTYGNLKPQKPT 260

Query: 126 QSYVPRVFGFKLHKP 140
           QSYVP++FGFK+HKP
Sbjct: 261 QSYVPKIFGFKVHKP 275


>AT3G60250.1 | Symbols: CKB3 | CKB3; protein kinase regulator/
           transcription factor binding | chr3:22270714-22271962
           REVERSE
          Length = 276

 Score =  223 bits (567), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 106/136 (77%), Positives = 116/136 (85%), Gaps = 13/136 (9%)

Query: 18  SGDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPC 77
           + +MFT+EQ+E+VESAAEMLYGLIHVRYILTTKGMAAM EKYKN DFGRCPRV+CCGQ C
Sbjct: 141 NSEMFTDEQHEMVESAAEMLYGLIHVRYILTTKGMAAMTEKYKNCDFGRCPRVFCCGQSC 200

Query: 78  LPVGQSDIPRSSTVKIYCPK-------------YIDGAYFGTTFPHLFLMTYGHLKPQKA 124
           LPVGQSDIPRSSTVKIYCPK              IDGAYFGTTFPHLFLMTYG+LKPQK 
Sbjct: 201 LPVGQSDIPRSSTVKIYCPKCEDISYPRSKFQGNIDGAYFGTTFPHLFLMTYGNLKPQKP 260

Query: 125 AQSYVPRVFGFKLHKP 140
            QSYVP++FGFK+HKP
Sbjct: 261 TQSYVPKIFGFKVHKP 276


>AT5G47080.2 | Symbols: CKB1 | CKB1; protein kinase regulator |
           chr5:19125231-19126397 REVERSE
          Length = 256

 Score =  164 bits (414), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 79/82 (96%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           G+MFTEEQNEL+ESAAEMLYGLIH RYILT+KG+AAML+KYKNYDFGRCPRVYCCGQPCL
Sbjct: 153 GEMFTEEQNELIESAAEMLYGLIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCCGQPCL 212

Query: 79  PVGQSDIPRSSTVKIYCPKYID 100
           PVGQSD+PRSSTVKIYCPK  D
Sbjct: 213 PVGQSDLPRSSTVKIYCPKCED 234


>AT5G47080.3 | Symbols: CKB1 | CKB1; protein kinase regulator |
           chr5:19125231-19126397 REVERSE
          Length = 253

 Score =  164 bits (414), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 79/82 (96%)

Query: 19  GDMFTEEQNELVESAAEMLYGLIHVRYILTTKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 78
           G+MFTEEQNEL+ESAAEMLYGLIH RYILT+KG+AAML+KYKNYDFGRCPRVYCCGQPCL
Sbjct: 150 GEMFTEEQNELIESAAEMLYGLIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCCGQPCL 209

Query: 79  PVGQSDIPRSSTVKIYCPKYID 100
           PVGQSD+PRSSTVKIYCPK  D
Sbjct: 210 PVGQSDLPRSSTVKIYCPKCED 231