Jatropha Genome Database
- JcCB0094631.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0094631.10 + phase: 1 /partial
(158 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G78580.1 | Symbols: ATTPS1, TPS1 | ATTPS1 (TREHALOSE-6-PHOSPH... 224 2e-59
AT1G17000.1 | Symbols: ATTPS3, TPS3 | ATTPS3; alpha,alpha-trehal... 179 7e-46
AT1G16980.1 | Symbols: ATTPS2, TPS2 | ATTPS2; alpha,alpha-trehal... 179 7e-46
AT4G27550.1 | Symbols: ATTPS4, TPS4 | ATTPS4; alpha,alpha-trehal... 151 2e-37
AT1G06410.1 | Symbols: ATTPS7, TPS7, ATTPSA | ATTPS7; alpha,alph... 82 1e-16
AT1G68020.2 | Symbols: ATTPS6, TPS6 | ATTPS6; alpha,alpha-trehal... 82 2e-16
AT1G68020.1 | Symbols: ATTPS6, TPS6 | ATTPS6; alpha,alpha-trehal... 82 2e-16
AT4G17770.1 | Symbols: ATTPS5, TPS5 | ATTPS5; protein binding / ... 81 3e-16
AT1G60140.1 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose phosp... 77 4e-15
AT1G23870.1 | Symbols: ATTPS9, TPS9 | ATTPS9; transferase, trans... 75 1e-14
AT1G70290.1 | Symbols: ATTPS8, TPS8, ATTPSC | ATTPS8; alpha,alph... 73 6e-14
AT2G18700.1 | Symbols: ATTPS11, TPS11, ATTPSB | ATTPS11; transfe... 67 5e-12
>AT1G78580.1 | Symbols: ATTPS1, TPS1 | ATTPS1 (TREHALOSE-6-PHOSPHATE
SYNTHASE); alpha,alpha-trehalose-phosphate synthase
(UDP-forming)/ transferase, transferring glycosyl groups
| chr1:29552495-29557482 REVERSE
Length = 942
Score = 224 bits (571), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/158 (73%), Positives = 124/158 (78%), Gaps = 23/158 (14%)
Query: 1 VALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGA 60
VALVTSLRDGMNLVSYEFVACQ++KKGVLILSE FAGA
Sbjct: 460 VALVTSLRDGMNLVSYEFVACQEAKKGVLILSE-----------------------FAGA 496
Query: 61 AQSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSE 120
AQSLGAGAILVNPWNITEVA SI +AL M+ E+REKRHRHNF HV THTAQEWAETFVSE
Sbjct: 497 AQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTHTAQEWAETFVSE 556
Query: 121 LNDTVIEAQLRTRQVPPMLPEGDAIRRYSHSNNRLLIL 158
LNDTVIEAQLR +VPP LP+ DAI+RYS SNNRLLIL
Sbjct: 557 LNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLIL 594
>AT1G17000.1 | Symbols: ATTPS3, TPS3 | ATTPS3;
alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
chr1:5812728-5816662 FORWARD
Length = 783
Score = 179 bits (454), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 114/158 (72%), Gaps = 23/158 (14%)
Query: 1 VALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGA 60
V LVTSLRDG+NLVS+EFVACQ++K+GVLILSE FAGA
Sbjct: 357 VMLVTSLRDGLNLVSHEFVACQEAKRGVLILSE-----------------------FAGA 393
Query: 61 AQSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSE 120
QSLGAGA+LVNPWN+TEV+ +I++AL M E+RE RHR NFK+V TH+A++W F+SE
Sbjct: 394 GQSLGAGALLVNPWNVTEVSSAIKKALNMPYEERETRHRVNFKYVKTHSAEKWGFDFLSE 453
Query: 121 LNDTVIEAQLRTRQVPPMLPEGDAIRRYSHSNNRLLIL 158
LND E++L+ R++P LP+ D I+RYS SNNRL+IL
Sbjct: 454 LNDAFDESELQIRKIPHELPQQDVIQRYSLSNNRLIIL 491
>AT1G16980.1 | Symbols: ATTPS2, TPS2 | ATTPS2;
alpha,alpha-trehalose-phosphate synthase (UDP-forming)/
transferase, transferring glycosyl groups |
chr1:5807311-5811488 FORWARD
Length = 821
Score = 179 bits (453), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 113/158 (71%), Gaps = 23/158 (14%)
Query: 1 VALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGA 60
V LVTSLRDGMNLVSYEFVACQ++KKGVL+LSE FAGA
Sbjct: 379 VMLVTSLRDGMNLVSYEFVACQEAKKGVLVLSE-----------------------FAGA 415
Query: 61 AQSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSE 120
QSLG GA++VNPW++TEV+ +I+EAL M E+RE RHR NF++V TH+A++W F+SE
Sbjct: 416 GQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWGLDFMSE 475
Query: 121 LNDTVIEAQLRTRQVPPMLPEGDAIRRYSHSNNRLLIL 158
LN + E++++ R++P LPE D I++YS SNNRL+IL
Sbjct: 476 LNGIIPESEMQMRKIPLQLPEQDVIQQYSQSNNRLIIL 513
>AT4G27550.1 | Symbols: ATTPS4, TPS4 | ATTPS4;
alpha,alpha-trehalose-phosphate synthase (UDP-forming)/
transferase, transferring glycosyl groups |
chr4:13755689-13759740 FORWARD
Length = 795
Score = 151 bits (381), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 107/168 (63%), Gaps = 33/168 (19%)
Query: 1 VALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGA 60
V LVTSLRDGMNLVS EF+ACQ ++KGVLILSE FAGA
Sbjct: 371 VLLVTSLRDGMNLVSSEFIACQKAEKGVLILSE-----------------------FAGA 407
Query: 61 AQSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFV-- 118
QSLGAGAILVNPWNI EV+ +I EAL MS E++E++H+ NF++V TH+ Q+WA+ F+
Sbjct: 408 GQSLGAGAILVNPWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKL 467
Query: 119 -------SELNDTVIEAQLRTRQVPPM-LPEGDAIRRYSHSNNRLLIL 158
S+L + A+L + LPE D I++YS SNNRLLIL
Sbjct: 468 TLTNILCSKLIEITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLIL 515
>AT1G06410.1 | Symbols: ATTPS7, TPS7, ATTPSA | ATTPS7;
alpha,alpha-trehalose-phosphate synthase (UDP-forming)/
transferase, transferring glycosyl groups /
trehalose-phosphatase | chr1:1955413-1958153 FORWARD
Length = 851
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 13/126 (10%)
Query: 2 ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGAA 61
+VT++RDGMNL YE++ C+ +GL S+ + K + +F G +
Sbjct: 432 VVVTAVRDGMNLTPYEYIVCR------------QGLLGSESDFSGPKKSMLVASEFIGCS 479
Query: 62 QSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSEL 121
SL +GAI VNPWN+ +++ EAL+MS +++ RH +F++V+TH W+ +F+ +L
Sbjct: 480 PSL-SGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSFLQDL 538
Query: 122 NDTVIE 127
++
Sbjct: 539 ERICVD 544
>AT1G68020.2 | Symbols: ATTPS6, TPS6 | ATTPS6;
alpha,alpha-trehalose-phosphate synthase (UDP-forming)/
transferase, transferring glycosyl groups /
trehalose-phosphatase | chr1:25497493-25500241 FORWARD
Length = 860
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 8/120 (6%)
Query: 2 ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGAA 61
LVT++RDGMNL+ YE++ S++G L + L+ N N K +F G +
Sbjct: 444 CLVTAVRDGMNLIPYEYIV---SRQGNEKLDKILKLEANNRNK----KSMLVVSEFIGCS 496
Query: 62 QSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSEL 121
SL +GAI VNPWN+ VAD++ AL ++ +++ RH ++K+V+TH WA +F+ +L
Sbjct: 497 PSL-SGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYVSTHDVGYWARSFLQDL 555
>AT1G68020.1 | Symbols: ATTPS6, TPS6 | ATTPS6;
alpha,alpha-trehalose-phosphate synthase (UDP-forming)/
transferase, transferring glycosyl groups /
trehalose-phosphatase | chr1:25497493-25499595 FORWARD
Length = 700
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 72/120 (60%), Gaps = 8/120 (6%)
Query: 2 ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGAA 61
LVT++RDGMNL+ YE++ S++G L + L+ N N K +F G +
Sbjct: 444 CLVTAVRDGMNLIPYEYIV---SRQGNEKLDKILKLEANNRNK----KSMLVVSEFIGCS 496
Query: 62 QSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSEL 121
SL +GAI VNPWN+ VAD++ AL ++ +++ RH ++K+V+TH WA +F+ +L
Sbjct: 497 PSL-SGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYVSTHDVGYWARSFLQDL 555
>AT4G17770.1 | Symbols: ATTPS5, TPS5 | ATTPS5; protein binding /
transferase, transferring glycosyl groups /
trehalose-phosphatase | chr4:9877055-9880084 FORWARD
Length = 862
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 9/120 (7%)
Query: 2 ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGAA 61
LVT++RDGMNL+ YE++ C ++G L+E GL + + K +F G +
Sbjct: 434 CLVTAVRDGMNLIPYEYIIC---RQGNPKLNETIGL-----DPSAAKKSMLVVSEFIGCS 485
Query: 62 QSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSEL 121
SL +GAI VNPWNI V +++ AL +S +++ RH + K+V+TH WA +F+ +L
Sbjct: 486 PSL-SGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARSFIQDL 544
>AT1G60140.1 | Symbols: ATTPS10, TPS10 | ATTPS10 (trehalose
phosphate synthase); transferase, transferring glycosyl
groups / trehalose-phosphatase | chr1:22177246-22180073
REVERSE
Length = 861
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 73/122 (59%), Gaps = 13/122 (10%)
Query: 2 ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGL--QIPNSNSNQYGKQKFRSWKFAG 59
+V ++RDGMNLV Y++ C ++G +++ G+ +P +++ + F G
Sbjct: 434 CIVNAVRDGMNLVPYKYTVC---RQGTPSMNKSLGVSDDLPRTSTLVLSE-------FIG 483
Query: 60 AAQSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVS 119
+ SL +GAI VNPW++ VADS+ A+TMS +++ RH+ +F +++TH WA +F
Sbjct: 484 CSPSL-SGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSFSQ 542
Query: 120 EL 121
+L
Sbjct: 543 DL 544
>AT1G23870.1 | Symbols: ATTPS9, TPS9 | ATTPS9; transferase,
transferring glycosyl groups / trehalose-phosphatase |
chr1:8432695-8435506 FORWARD
Length = 867
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 2 ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGAA 61
LV ++RDGMNLV Y+++ C+ G + + G+ ++ ++ +F G +
Sbjct: 434 CLVNAVRDGMNLVPYKYIICRQGTPG---MDKAMGISHDSARTSMLVVSEF-----IGCS 485
Query: 62 QSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSEL 121
SL +GAI VNPW++ VA+++ ALTM ++ RH ++ +V+TH WA++F+ +L
Sbjct: 486 PSL-SGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFMQDL 544
>AT1G70290.1 | Symbols: ATTPS8, TPS8, ATTPSC | ATTPS8;
alpha,alpha-trehalose-phosphate synthase (UDP-forming)/
transferase, transferring glycosyl groups /
trehalose-phosphatase | chr1:26471286-26474078 REVERSE
Length = 856
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 18/123 (14%)
Query: 2 ALVTSLRDGMNLVSYEFVACQD---SKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFA 58
LV ++RDGMNLV Y+++ C+ S K V+ S P +++ + F
Sbjct: 432 CLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDSS-------PRTSTLVVSE-------FI 477
Query: 59 GAAQSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFV 118
G + SL +GAI VNPW++ VA+++ AL MS +++ RH ++ +++TH WA++F+
Sbjct: 478 GCSPSL-SGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSFM 536
Query: 119 SEL 121
+L
Sbjct: 537 QDL 539
>AT2G18700.1 | Symbols: ATTPS11, TPS11, ATTPSB | ATTPS11;
transferase, transferring glycosyl groups |
chr2:8109043-8111799 FORWARD
Length = 862
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 2 ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEYRGLQIPNSNSNQYGKQKFRSWKFAGAA 61
+V ++RDGMNLV Y++ +++G L G + K +F G +
Sbjct: 426 VVVNAVRDGMNLVPYKYTV---TRQGSPALDAALGF-----GEDDVRKSVIIVSEFIGCS 477
Query: 62 QSLGAGAILVNPWNITEVADSIREALTMSCEDREKRHRHNFKHVTTHTAQEWAETFVSEL 121
SL +GAI VNPWNI V +++ A+TMS +++ RH+ + K++++H WA ++ +L
Sbjct: 478 PSL-SGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDL 536