Jatropha Genome Database
- JcCB0091771.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0091771.10 - phase: 0 /partial
(294 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64650.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED... 500 e-142
AT1G64650.2 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED... 498 e-141
AT4G27720.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED... 471 e-133
AT3G49310.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 450 e-127
AT2G23093.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 48 9e-06
>AT1G64650.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF791 (InterPro:IPR008509), Major facilitator
superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27720.1); Has 565
Blast hits to 562 proteins in 197 species: Archae - 7;
Bacteria - 312; Metazoa - 76; Fungi - 39; Plants - 85;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
| chr1:24023805-24026336 REVERSE
Length = 462
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/290 (83%), Positives = 271/290 (93%), Gaps = 5/290 (1%)
Query: 6 HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
+GLVAI++GLFGN LVD+L LG VAPFDAAACFLAIGMA+I+SSW+ENYGDPSENKDLL+
Sbjct: 175 NGLVAIIAGLFGNYLVDSLSLGPVAPFDAAACFLAIGMAVIISSWSENYGDPSENKDLLT 234
Query: 66 QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
QFK AA AIAS EKIALLGAIQSLFEGSMYTFVFLWTP+LSPN E+IPHGFIFATFM
Sbjct: 235 QFKNAASAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNEEDIPHGFIFATFM 291
Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
LASMLGSSIASRL+AHSSPKVESYMQIVFVIS+A+L+LPV+TSFL+ P+GVKGGSISFSG
Sbjct: 292 LASMLGSSIASRLLAHSSPKVESYMQIVFVISSAALMLPVVTSFLVAPSGVKGGSISFSG 351
Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFP 245
C+QL+GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVC+VLYNVDAFP
Sbjct: 352 CIQLMGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCLVLYNVDAFP 411
Query: 246 IIVMFGMCSIFLFVASLLQRRLMVIAESQKSRSPDWTAMREM--EAEPLN 293
+ VMFGMCS+FLFVAS+LQRRLM +AE KSRS +W+A +EM EA+PLN
Sbjct: 412 MTVMFGMCSVFLFVASILQRRLMNVAEIHKSRSQEWSAEKEMTSEADPLN 461
>AT1G64650.2 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF791 (InterPro:IPR008509), Major facilitator
superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27720.1); Has 548
Blast hits to 545 proteins in 182 species: Archae - 5;
Bacteria - 298; Metazoa - 76; Fungi - 38; Plants - 85;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
| chr1:24023805-24026048 REVERSE
Length = 421
Score = 498 bits (1283), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/290 (83%), Positives = 271/290 (93%), Gaps = 5/290 (1%)
Query: 6 HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
+GLVAI++GLFGN LVD+L LG VAPFDAAACFLAIGMA+I+SSW+ENYGDPSENKDLL+
Sbjct: 134 NGLVAIIAGLFGNYLVDSLSLGPVAPFDAAACFLAIGMAVIISSWSENYGDPSENKDLLT 193
Query: 66 QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
QFK AA AIAS EKIALLGAIQSLFEGSMYTFVFLWTP+LSPN E+IPHGFIFATFM
Sbjct: 194 QFKNAASAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNEEDIPHGFIFATFM 250
Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
LASMLGSSIASRL+AHSSPKVESYMQIVFVIS+A+L+LPV+TSFL+ P+GVKGGSISFSG
Sbjct: 251 LASMLGSSIASRLLAHSSPKVESYMQIVFVISSAALMLPVVTSFLVAPSGVKGGSISFSG 310
Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFP 245
C+QL+GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVC+VLYNVDAFP
Sbjct: 311 CIQLMGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCLVLYNVDAFP 370
Query: 246 IIVMFGMCSIFLFVASLLQRRLMVIAESQKSRSPDWTAMREM--EAEPLN 293
+ VMFGMCS+FLFVAS+LQRRLM +AE KSRS +W+A +EM EA+PLN
Sbjct: 371 MTVMFGMCSVFLFVASILQRRLMNVAEIHKSRSQEWSAEKEMTSEADPLN 420
>AT4G27720.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF791 (InterPro:IPR008509), Major facilitator
superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G64650.1); Has 496
Blast hits to 491 proteins in 183 species: Archae - 5;
Bacteria - 234; Metazoa - 75; Fungi - 33; Plants - 96;
Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
| chr4:13831203-13833521 FORWARD
Length = 460
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/290 (78%), Positives = 257/290 (88%), Gaps = 7/290 (2%)
Query: 6 HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
+GLVAI++GLFGNLLVD LG VAPFDAAACFL IGMA+ILSSWTENYGDPSENKDLL+
Sbjct: 175 NGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLTIGMAVILSSWTENYGDPSENKDLLT 234
Query: 66 QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
QF+ AAVAIAS EKIALLGAIQSLFEGSMYTFVFLWTP+LSPN EEIPHGFIFATFM
Sbjct: 235 QFRGAAVAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFM 291
Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
LASMLGSS+ASRL++ S+PKVESYMQIVF++S A+LLLP++ + I P+ VKGG ISFSG
Sbjct: 292 LASMLGSSLASRLLSRSTPKVESYMQIVFLVSGAALLLPILMTLFIAPSKVKGGGISFSG 351
Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFP 245
C QLLGFC FEACVG+FWPSIMKMRSQYIPEEARSTIMNFFRIPLN+FVC+VLYNV+AFP
Sbjct: 352 CFQLLGFCIFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVNAFP 411
Query: 246 IIVMFGMCSIFLFVASLLQRRLMVIAESQKSRSPDWTAM--REMEAEPLN 293
I VMFGMCSIFLFVASLLQRRLM+I + K ++ DWT + R E +PLN
Sbjct: 412 ITVMFGMCSIFLFVASLLQRRLMMIVD--KPKTNDWTPLEERNTEEDPLN 459
>AT3G49310.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF791 (InterPro:IPR008509), Major
facilitator superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27720.1); Has 550
Blast hits to 545 proteins in 201 species: Archae - 5;
Bacteria - 285; Metazoa - 85; Fungi - 33; Plants - 99;
Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
| chr3:18285084-18287991 REVERSE
Length = 460
Score = 450 bits (1158), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/285 (75%), Positives = 251/285 (88%), Gaps = 5/285 (1%)
Query: 6 HGLVAIMSGLFGNLLVDNLGLGAVAPFDAAACFLAIGMAIILSSWTENYGDPSENKDLLS 65
+GLVAI+SGLFGNLLVD G VAPFDAAACFLAIGMAIIL +W+EN+GDPS++KDLL+
Sbjct: 175 NGLVAILSGLFGNLLVDTFSFGPVAPFDAAACFLAIGMAIILGTWSENFGDPSDSKDLLT 234
Query: 66 QFKAAAVAIASGEIHEKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFM 125
QFK AA+AIAS EKIALLGAIQSLFE SMYTFVFLWTP+LSPN EEIPHGF+FATFM
Sbjct: 235 QFKVAAIAIAS---DEKIALLGAIQSLFEASMYTFVFLWTPALSPNDEEIPHGFVFATFM 291
Query: 126 LASMLGSSIASRLMAHSSPKVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSG 185
LASMLGSS+A+RLM+ SS +VE+YMQIVF++SAASLLLP+ TS L+ P+ VK +S +
Sbjct: 292 LASMLGSSLAARLMSRSSLRVENYMQIVFLVSAASLLLPITTSVLVTPSKVKDEGLSLTS 351
Query: 186 CVQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLYNVDAFP 245
+QLLGFC FE+CVGIFWPSIMKMRSQYIPEEARSTIMNFFR+PLN+FVCIVLYNVDAFP
Sbjct: 352 SIQLLGFCVFESCVGIFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCIVLYNVDAFP 411
Query: 246 IIVMFGMCSIFLFVASLLQRRLMVIAESQKSRSPDWTAMREMEAE 290
I +MFGMCSIFLFVAS+LQRRLMVI+E K ++ DW+ M+E +E
Sbjct: 412 ITIMFGMCSIFLFVASILQRRLMVISE--KPKAEDWSPMKERNSE 454
>AT2G23093.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein
of unknown function DUF791 (InterPro:IPR008509), Major
facilitator superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G49310.1); Has 251
Blast hits to 248 proteins in 89 species: Archae - 0;
Bacteria - 66; Metazoa - 68; Fungi - 18; Plants - 79;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
| chr2:9832193-9834416 FORWARD
Length = 449
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 81 EKIALLGAIQSLFEGSMYTFVFLWTPSLSPNGEEIPHGFIFATFMLASMLGSSIASRLMA 140
++I LG Q+ + S F LW P++ +G E+ G I+ F+ + MLGS++ LM+
Sbjct: 259 KRIWFLGTSQACLQFSTAVFWILWAPTIVADGREVNLGLIYPCFLGSRMLGSTVFPWLMS 318
Query: 141 HSSP-KVESYMQIVFVISAASLLLPVITSFLIVPTGVKGGSISFSGCVQLLGFCTFEACV 199
S ++E + ++ LL ++ F IV + I ++ FC F
Sbjct: 319 GQSLLRLEDCLVYIYA------LLGIV--FSIVAYDYQEIRI------LVVLFCLFHGFA 364
Query: 200 GIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 231
G+ P + ++R+ Y+P E R +++ ++P N
Sbjct: 365 GLALPLLARLRTMYVPNELRGGMISLSQVPAN 396