Jatropha Genome Database
- JcCB0087171.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0087171.10 - phase: 0 /partial
(450 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 708 0.0
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 708 0.0
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 708 0.0
AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 508 e-144
AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 508 e-144
AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 508 e-144
AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 467 e-132
AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 467 e-132
AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);... 464 e-131
AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 460 e-129
AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 459 e-129
AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);... 385 e-107
AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6); tr... 375 e-104
AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE FACTO... 375 e-104
AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6); tr... 375 e-104
AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONSE FACTOR 8); tr... 375 e-104
AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);... 375 e-104
AT1G35520.1 | Symbols: ARF15 | ARF15 (AUXIN RESPONSE FACTOR 15);... 372 e-103
AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4); tr... 371 e-103
AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);... 370 e-103
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS); transc... 369 e-102
AT1G34170.1 | Symbols: ARF13 | transcription factor | chr1:12444... 366 e-101
AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPONSE FACTOR 22);... 363 e-100
AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);... 362 e-100
AT2G33860.1 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding / tr... 353 2e-97
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 352 3e-97
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 347 7e-96
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 347 9e-96
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPON... 345 5e-95
AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 343 1e-94
AT1G34170.2 | Symbols: ARF13 | transcription factor | chr1:12444... 328 6e-90
AT1G34170.3 | Symbols: | transcription factor | chr1:12443578-1... 327 8e-90
AT2G28350.1 | Symbols: ARF10 | ARF10 (AUXIN RESPONSE FACTOR 10);... 253 3e-67
AT4G30080.1 | Symbols: ARF16 | ARF16 (AUXIN RESPONSE FACTOR 16);... 251 5e-67
AT1G43950.1 | Symbols: ARF23 | ARF23 (AUXIN RESPONSE FACTOR 23);... 221 9e-58
AT1G77850.1 | Symbols: ARF17 | ARF17 (AUXIN RESPONSE FACTOR 17);... 186 2e-47
AT1G01030.1 | Symbols: NGA3 | NGA3 (NGATHA3); transcription fact... 58 1e-08
AT4G01500.1 | Symbols: NGA4 | NGA4 (NGATHA4); transcription fact... 55 1e-07
AT2G46870.1 | Symbols: NGA1 | NGA1 (NGATHA1); transcription fact... 55 1e-07
AT3G61970.1 | Symbols: NGA2 | NGA2 (NGATHA2); transcription fact... 51 1e-06
AT3G25730.1 | Symbols: | AP2 domain-containing transcription fa... 49 6e-06
AT1G13260.1 | Symbols: RAV1 | RAV1; DNA binding / transcription ... 49 9e-06
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/452 (76%), Positives = 372/452 (82%), Gaps = 3/452 (0%)
Query: 2 EGQKGHSRRQASAR---DAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEAST 58
EGQK +S R A+A D E ALY ELWHACAGPLVTVPR+ +RVFYFPQGHIEQVEAST
Sbjct: 36 EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95
Query: 59 NQVADQQMPVYCLPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPP 118
NQ A+QQMP+Y LPSK+LCRVINV LKAE DTDEVYAQ+TL+PEA QDENA+EK+ PP
Sbjct: 96 NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155
Query: 119 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWR 178
PPRF VHSFCKTLTASDTSTHGGFSVLRRHA ECLPPLDMSRQPPTQELVAKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215
Query: 179 FQHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 238
F+HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275
Query: 239 VISSHSMHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFK 298
VISSHSMHL VLATA A+S GTMFTVYYKPRTSPSEFIVPFD+YMESVKNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335
Query: 299 MRFEGEEAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIEXX 358
MRFEGEEAPEQRFTGTIVGIE++D TRWP+SKWR LKVRWDETS+IPRPDRVSPW +E
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395
Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAREGSSKVTADPTLPIGYSRVLQGQEFAT 418
L REG++K DP G SRVLQGQE++T
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 455
Query: 419 LRSSVVESNESDTAEKSVMWPSSIDDEKIDVV 450
LR+ ES E D E SV+W SS DD+K+DVV
Sbjct: 456 LRTKHTESVECDAPENSVVWQSSADDDKVDVV 487
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/452 (76%), Positives = 372/452 (82%), Gaps = 3/452 (0%)
Query: 2 EGQKGHSRRQASAR---DAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEAST 58
EGQK +S R A+A D E ALY ELWHACAGPLVTVPR+ +RVFYFPQGHIEQVEAST
Sbjct: 36 EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95
Query: 59 NQVADQQMPVYCLPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPP 118
NQ A+QQMP+Y LPSK+LCRVINV LKAE DTDEVYAQ+TL+PEA QDENA+EK+ PP
Sbjct: 96 NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155
Query: 119 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWR 178
PPRF VHSFCKTLTASDTSTHGGFSVLRRHA ECLPPLDMSRQPPTQELVAKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215
Query: 179 FQHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 238
F+HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275
Query: 239 VISSHSMHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFK 298
VISSHSMHL VLATA A+S GTMFTVYYKPRTSPSEFIVPFD+YMESVKNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335
Query: 299 MRFEGEEAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIEXX 358
MRFEGEEAPEQRFTGTIVGIE++D TRWP+SKWR LKVRWDETS+IPRPDRVSPW +E
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395
Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAREGSSKVTADPTLPIGYSRVLQGQEFAT 418
L REG++K DP G SRVLQGQE++T
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 455
Query: 419 LRSSVVESNESDTAEKSVMWPSSIDDEKIDVV 450
LR+ ES E D E SV+W SS DD+K+DVV
Sbjct: 456 LRTKHTESVECDAPENSVVWQSSADDDKVDVV 487
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/452 (76%), Positives = 372/452 (82%), Gaps = 3/452 (0%)
Query: 2 EGQKGHSRRQASAR---DAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEAST 58
EGQK +S R A+A D E ALY ELWHACAGPLVTVPR+ +RVFYFPQGHIEQVEAST
Sbjct: 36 EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95
Query: 59 NQVADQQMPVYCLPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPP 118
NQ A+QQMP+Y LPSK+LCRVINV LKAE DTDEVYAQ+TL+PEA QDENA+EK+ PP
Sbjct: 96 NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155
Query: 119 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWR 178
PPRF VHSFCKTLTASDTSTHGGFSVLRRHA ECLPPLDMSRQPPTQELVAKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215
Query: 179 FQHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 238
F+HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275
Query: 239 VISSHSMHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFK 298
VISSHSMHL VLATA A+S GTMFTVYYKPRTSPSEFIVPFD+YMESVKNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335
Query: 299 MRFEGEEAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIEXX 358
MRFEGEEAPEQRFTGTIVGIE++D TRWP+SKWR LKVRWDETS+IPRPDRVSPW +E
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395
Query: 359 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAREGSSKVTADPTLPIGYSRVLQGQEFAT 418
L REG++K DP G SRVLQGQE++T
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 455
Query: 419 LRSSVVESNESDTAEKSVMWPSSIDDEKIDVV 450
LR+ ES E D E SV+W SS DD+K+DVV
Sbjct: 456 LRTKHTESVECDAPENSVVWQSSADDDKVDVV 487
>AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 665
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/337 (70%), Positives = 285/337 (84%), Gaps = 1/337 (0%)
Query: 20 ALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKILCRV 79
AL ELWHACAGPLVT+PREGERV+YFP+GH+EQ+EAS +Q +QQMP + LPSKILC+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
IN+ +AEP+TDEVYAQ+TL+PE Q E P Q P + VHSFCKTLTASDTSTH
Sbjct: 78 INIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPE-KCTVHSFCKTLTASDTSTH 136
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSVLRRHA +CLPPLDMS+QPP QELVA DLH +EW F+HIFRGQPRRHLL +GWSVF
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
VSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMH+ VLATA+ A++
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256
Query: 260 GTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 319
GT+F+V+YKPRTS SEFIV +RY+E+ S+GMRFKMRFEGEEAPE+RF+GTIVG++
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 316
Query: 320 DADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+ S+ W +S+WR LKV+WDE S++ RP+RVSPW +E
Sbjct: 317 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELE 353
>AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 665
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/337 (70%), Positives = 285/337 (84%), Gaps = 1/337 (0%)
Query: 20 ALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKILCRV 79
AL ELWHACAGPLVT+PREGERV+YFP+GH+EQ+EAS +Q +QQMP + LPSKILC+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
IN+ +AEP+TDEVYAQ+TL+PE Q E P Q P + VHSFCKTLTASDTSTH
Sbjct: 78 INIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPE-KCTVHSFCKTLTASDTSTH 136
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSVLRRHA +CLPPLDMS+QPP QELVA DLH +EW F+HIFRGQPRRHLL +GWSVF
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
VSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMH+ VLATA+ A++
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256
Query: 260 GTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 319
GT+F+V+YKPRTS SEFIV +RY+E+ S+GMRFKMRFEGEEAPE+RF+GTIVG++
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 316
Query: 320 DADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+ S+ W +S+WR LKV+WDE S++ RP+RVSPW +E
Sbjct: 317 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELE 353
>AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 662
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/337 (70%), Positives = 285/337 (84%), Gaps = 1/337 (0%)
Query: 20 ALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKILCRV 79
AL ELWHACAGPLVT+PREGERV+YFP+GH+EQ+EAS +Q +QQMP + LPSKILC+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
IN+ +AEP+TDEVYAQ+TL+PE Q E P Q P + VHSFCKTLTASDTSTH
Sbjct: 78 INIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPE-KCTVHSFCKTLTASDTSTH 136
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSVLRRHA +CLPPLDMS+QPP QELVA DLH +EW F+HIFRGQPRRHLL +GWSVF
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
VSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMH+ VLATA+ A++
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256
Query: 260 GTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 319
GT+F+V+YKPRTS SEFIV +RY+E+ S+GMRFKMRFEGEEAPE+RF+GTIVG++
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 316
Query: 320 DADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+ S+ W +S+WR LKV+WDE S++ RP+RVSPW +E
Sbjct: 317 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELE 353
>AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 601
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/348 (65%), Positives = 276/348 (79%), Gaps = 7/348 (2%)
Query: 10 RQASARDAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQ-VADQQMPV 68
R + + D E LYTELW ACAGPLV VPR GERVFYFPQGH+EQ+ ASTNQ V DQ++PV
Sbjct: 9 RTSGSNDDE--LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPV 66
Query: 69 YCLPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFC 128
+ LP KILCRV++V LKAE +TDEVYAQ+TL PE Q E P P + V SF
Sbjct: 67 FNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPTVDSFV 125
Query: 129 KTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPR 188
K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQELVA+DLHG EWRF+HIFRGQPR
Sbjct: 126 KILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPR 185
Query: 189 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLD 248
RHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +QQ +P+SVISS SM L
Sbjct: 186 RHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLG 245
Query: 249 VLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPE 308
VLATAS AV+ T+F V+YKPR S+FI+ ++YM ++KN +S+GMR++MRFEGEE+PE
Sbjct: 246 VLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPE 303
Query: 309 QRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+ FTGTI+G D S++WP SKWR L+++WDE S+I RP++VSPW IE
Sbjct: 304 RIFTGTIIGSGDL-SSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE 350
>AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 622
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/337 (66%), Positives = 271/337 (80%), Gaps = 5/337 (1%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQ-VADQQMPVYCLPSKILCRV 79
LYTELW ACAGPLV VPR GERVFYFPQGH+EQ+ ASTNQ V DQ++PV+ LP KILCRV
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 98
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
++V LKAE +TDEVYAQ+TL PE Q E P P + V SF K LTASDTSTH
Sbjct: 99 LSVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPTVDSFVKILTASDTSTH 157
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSVLR+HA ECLP LDM++ PTQELVA+DLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 158 GGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 217
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
V+SKRLVAGDAF+FLRGE G+LRVGVRR +QQ +P+SVISS SM L VLATAS AV+
Sbjct: 218 VTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTT 277
Query: 260 GTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 319
T+F V+YKPR S+FI+ ++YM ++KN +S+GMR++MRFEGEE+PE+ FTGTI+G
Sbjct: 278 TTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSG 335
Query: 320 DADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
D S++WP SKWR L+++WDE S+I RP++VSPW IE
Sbjct: 336 DL-SSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE 371
>AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 602
Score = 464 bits (1193), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/349 (65%), Positives = 273/349 (78%), Gaps = 11/349 (3%)
Query: 12 ASARDAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQ-VADQQMPVYC 70
+S+R + LYTELW CAGPLV VPR ERVFYFPQGH+EQ+ ASTNQ + +++PV+
Sbjct: 13 SSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFD 72
Query: 71 LPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPP---PPRFHVHSF 127
LP KILCRV++V LKAE +TDEVYAQ+TL PE E+ E PP P + HSF
Sbjct: 73 LPPKILCRVLDVTLKAEHETDEVYAQITLQPE----EDQSEPTSLDPPIVGPTKQEFHSF 128
Query: 128 CKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQP 187
K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQELV +DLHG EWRF+HIFRGQP
Sbjct: 129 VKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQP 188
Query: 188 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 247
RRHLL +GWS FVSSKRLVAGDAF+FLRGENG+LRVGVRR R Q +P+SVISS SMHL
Sbjct: 189 RRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHL 248
Query: 248 DVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAP 307
VLATAS AV T+F V+YKPR S+FIV ++YME++K+ +S+G RF+MRFEGEE+P
Sbjct: 249 GVLATASHAVRTTTIFVVFYKPRI--SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESP 306
Query: 308 EQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
E+ FTGTIVG D S++WP SKWR L+V+WDE + + RPD+VSPW IE
Sbjct: 307 ERIFTGTIVGSGDL-SSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE 354
>AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 636
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/337 (65%), Positives = 271/337 (80%), Gaps = 4/337 (1%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQM-PVYCLPSKILCRV 79
LY ELW CAGPLV VP+ ERV+YFPQGH+EQ+EAST QV M P++ LP KILC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
+NV L+AE DTDEVYAQ+TL+P + + + PS P R VHSF K LTASDTSTH
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSVLR+HA ECLPPLDM++Q PTQELVA+D+HG +W+F+HIFRGQPRRHLL +GWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
V+SKRLVAGD F+FLRGENGELRVGVRRA QQ ++PSSVISSHSMHL VLATA A
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248
Query: 260 GTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 319
TMF VYYKPRT S+FI+ ++Y+E++ N +S+GMRFKMRFEGE++PE+R++GT++G++
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVK 306
Query: 320 DADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
D S W +SKWRCL+V WDE ++I RP++VSPW IE
Sbjct: 307 DC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
>AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 638
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/337 (65%), Positives = 271/337 (80%), Gaps = 4/337 (1%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQM-PVYCLPSKILCRV 79
LY ELW CAGPLV VP+ ERV+YFPQGH+EQ+EAST QV M P++ LP KILC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
+NV L+AE DTDEVYAQ+TL+P + + + PS P R VHSF K LTASDTSTH
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSVLR+HA ECLPPLDM++Q PTQELVA+D+HG +W+F+HIFRGQPRRHLL +GWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
V+SKRLVAGD F+FLRGENGELRVGVRRA QQ ++PSSVISSHSMHL VLATA A
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248
Query: 260 GTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 319
TMF VYYKPRT S+FI+ ++Y+E++ N +S+GMRFKMRFEGE++PE+R++GT++G++
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVK 306
Query: 320 DADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
D S W +SKWRCL+V WDE ++I RP++VSPW IE
Sbjct: 307 DC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
>AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);
transcription factor | chr1:13108634-13111700 FORWARD
Length = 605
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 178/340 (52%), Positives = 245/340 (72%), Gaps = 7/340 (2%)
Query: 17 AETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKIL 76
+++ +Y +LW CAGPL +P+ GE+V+YFPQGHIE VEAST + ++ P+ PSK+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQ 79
Query: 77 CRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDT 136
CRVI + LK E ++DE YA++TL+P+ Q + Q P V+SF K LTASDT
Sbjct: 80 CRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRP----LVNSFTKVLTASDT 135
Query: 137 STHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGW 196
S HGGFSV ++HA+ECLPPLDMS+ PTQE++A DLHGN+WRF+HI+RG +RHLL GW
Sbjct: 136 SVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGW 195
Query: 197 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRA 256
+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S SM ++A+A A
Sbjct: 196 NAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHA 255
Query: 257 VSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIV 316
MF V YKPR+ S+FIV +D++++ V N +++G RF MRFEG++ E+R GTI+
Sbjct: 256 FDNQCMFIVVYKPRS--SQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTII 313
Query: 317 GIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
G+ D S W S+WR L+V+WDE ++ PRP++VSPW IE
Sbjct: 314 GVSDF-SPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIE 352
>AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 935
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 246/342 (71%), Gaps = 10/342 (2%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVY-CLPSKILCRV 79
L +ELWHACAGPLV++P G RV YFPQGH EQV ASTN+ D +P Y L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPP----PPRFHVHSFCKTLTASD 135
NV + A+ +TDEVYAQ+TL P Q++ K P P P R + FCKTLTASD
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQ----KDPYLPAELGVPSRQPTNYFCKTLTASD 137
Query: 136 TSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSG 195
TSTHGGFSV RR A + PPLD S+QPP QEL+A+DLH NEW+F+HIFRGQP+RHLL +G
Sbjct: 138 TSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTG 197
Query: 196 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASR 255
WSVFVS+KRLVAGD+ +F+ + +L +G+RRA R Q +PSSV+SS SMHL +LA A+
Sbjct: 198 WSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAH 257
Query: 256 AVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGT 314
A + + FT++Y PR SPSEF++P +Y+++V + S+GMRF+M FE EE+ +R+ GT
Sbjct: 258 AAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 317
Query: 315 IVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
I GI D D TRW S WR +KV WDE++A R RVS W IE
Sbjct: 318 ITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIE 359
>AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE FACTOR
8); transcription factor | chr5:14630151-14634106
FORWARD
Length = 811
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/365 (52%), Positives = 249/365 (68%), Gaps = 28/365 (7%)
Query: 3 GQKGHSRRQASARDAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVA 62
GQ+GH + E L +ELWHACAGPLV++P G RV YFPQGH EQV A+TN+
Sbjct: 9 GQQGH--------EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEV 60
Query: 63 DQQMPVY-CLPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAV---------EK 112
D +P Y LP +++C++ NV + A+ +TDEVYAQ+TL P +++ K
Sbjct: 61 DGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSK 120
Query: 113 QPSQPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDL 172
QPS + FCKTLTASDTSTHGGFSV RR A + PPLD + QPP QEL+A+DL
Sbjct: 121 QPS---------NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDL 171
Query: 173 HGNEWRFQHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 232
H EW+F+HIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E +L +G+R A R Q
Sbjct: 172 HDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQ 231
Query: 233 GNVPSSVISSHSMHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESV-KNNY 291
VPSSV+SS SMH+ +LA A+ A + + FTV++ PR S SEF++ +Y+++V
Sbjct: 232 TIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRI 291
Query: 292 SIGMRFKMRFEGEEAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVS 351
S+GMRF+M FE EE+ +R+ GTI GI D DS RWP S WR +KV WDE++A R RVS
Sbjct: 292 SVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVS 351
Query: 352 PWSIE 356
W IE
Sbjct: 352 LWEIE 356
>AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 933
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 246/342 (71%), Gaps = 10/342 (2%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVY-CLPSKILCRV 79
L +ELWHACAGPLV++P G RV YFPQGH EQV ASTN+ D +P Y L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 79
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPP----PPRFHVHSFCKTLTASD 135
NV + A+ +TDEVYAQ+TL P Q++ K P P P R + FCKTLTASD
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNAQEQ----KDPYLPAELGVPSRQPTNYFCKTLTASD 135
Query: 136 TSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSG 195
TSTHGGFSV RR A + PPLD S+QPP QEL+A+DLH NEW+F+HIFRGQP+RHLL +G
Sbjct: 136 TSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTG 195
Query: 196 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASR 255
WSVFVS+KRLVAGD+ +F+ + +L +G+RRA R Q +PSSV+SS SMHL +LA A+
Sbjct: 196 WSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAH 255
Query: 256 AVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGT 314
A + + FT++Y PR SPSEF++P +Y+++V + S+GMRF+M FE EE+ +R+ GT
Sbjct: 256 AAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 315
Query: 315 IVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
I GI D D TRW S WR +KV WDE++A R RVS W IE
Sbjct: 316 ITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIE 357
>AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONSE FACTOR 8);
transcription factor | chr5:14630151-14633916 FORWARD
Length = 773
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/365 (52%), Positives = 249/365 (68%), Gaps = 28/365 (7%)
Query: 3 GQKGHSRRQASARDAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVA 62
GQ+GH + E L +ELWHACAGPLV++P G RV YFPQGH EQV A+TN+
Sbjct: 9 GQQGH--------EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEV 60
Query: 63 DQQMPVY-CLPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAV---------EK 112
D +P Y LP +++C++ NV + A+ +TDEVYAQ+TL P +++ K
Sbjct: 61 DGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSK 120
Query: 113 QPSQPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDL 172
QPS + FCKTLTASDTSTHGGFSV RR A + PPLD + QPP QEL+A+DL
Sbjct: 121 QPS---------NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDL 171
Query: 173 HGNEWRFQHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 232
H EW+F+HIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E +L +G+R A R Q
Sbjct: 172 HDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQ 231
Query: 233 GNVPSSVISSHSMHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESV-KNNY 291
VPSSV+SS SMH+ +LA A+ A + + FTV++ PR S SEF++ +Y+++V
Sbjct: 232 TIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRI 291
Query: 292 SIGMRFKMRFEGEEAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVS 351
S+GMRF+M FE EE+ +R+ GTI GI D DS RWP S WR +KV WDE++A R RVS
Sbjct: 292 SVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVS 351
Query: 352 PWSIE 356
W IE
Sbjct: 352 LWEIE 356
>AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);
transcription factor | chr1:12508548-12511520 REVERSE
Length = 593
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/340 (51%), Positives = 241/340 (70%), Gaps = 7/340 (2%)
Query: 17 AETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKIL 76
+++ +Y +LW CAGPL +P+ GE+V+YFPQGHIE VE ST + ++ P+ LPSK+
Sbjct: 20 SKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQ 79
Query: 77 CRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDT 136
CRVI + LK E ++DE YA++TL+P+ Q + + P V+SF K LTASDT
Sbjct: 80 CRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP----LVNSFTKVLTASDT 135
Query: 137 STHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGW 196
S HGGF V ++HA+ECLP LDMS+ P QEL+A DLHGN+WRF H +RG P+RHLL +GW
Sbjct: 136 SAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGW 195
Query: 197 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRA 256
+ F +SK+LVAGD +F+RGE GELRVG+RRA QQGN+PSS++S M V+A+A A
Sbjct: 196 NAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHA 255
Query: 257 VSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIV 316
MFTV YKPR+ S+FIV +D+++++V N +++G RF MR EG++ E+R GTI+
Sbjct: 256 FDNQCMFTVVYKPRS--SKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTII 313
Query: 317 GIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
G+ D S W S+WR L+V+WDE ++ P P +VSPW IE
Sbjct: 314 GVSDF-SPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIE 352
>AT1G35520.1 | Symbols: ARF15 | ARF15 (AUXIN RESPONSE FACTOR 15);
transcription factor | chr1:13082819-13085830 REVERSE
Length = 598
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/341 (51%), Positives = 244/341 (71%), Gaps = 4/341 (1%)
Query: 17 AETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKIL 76
+++ +Y +LW CAGPL +P+ GE+V+YFPQG+IE VEAST + ++ P+ LPSK+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQ 79
Query: 77 CRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPP-RFHVHSFCKTLTASD 135
CRVI + LK E ++DE YA++TL+P+ EN P+Q R V+SF K LTASD
Sbjct: 80 CRVIAIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVNSFTKVLTASD 139
Query: 136 TSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSG 195
S +G FSV ++HA+ECLPPLDMS+ P QEL+A DLHGN+W F+H +RG P+RHLL +G
Sbjct: 140 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 199
Query: 196 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASR 255
W+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M V+A+A
Sbjct: 200 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 259
Query: 256 AVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTI 315
A MF V YKPR+ S+FIV +D+++++V N +++G RF MRFEG++ E+R+ GTI
Sbjct: 260 AFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTI 317
Query: 316 VGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+G+ + S W S WR L+V+WDE ++ RP++VSPW IE
Sbjct: 318 IGVSNF-SPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIE 357
>AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4);
transcription factor | chr5:24308558-24312187 REVERSE
Length = 788
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/347 (50%), Positives = 242/347 (69%), Gaps = 14/347 (4%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKILCRVI 80
+Y+ELWHACAGPL +P++G V YFPQGH+EQ +A + + ++P + L +I+CRV+
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIVCRVV 120
Query: 81 NVLLKAEPDTDEVYAQVTLVP-----------EAIQDENAVEKQPSQPPPPRFHVHSFCK 129
NV L A DTDEVY QVTL+P + +++ E++ R H FCK
Sbjct: 121 NVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKR-TPHMFCK 179
Query: 130 TLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRR 189
TLTASDTSTHGGFSV RR A +C PLD +Q P+QEL+AKDLHG EW+F+HI+RGQPRR
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239
Query: 190 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDV 249
HLL +GWS+FVS K LV+GDA +FLR E GELR+G+RRA R + +P S+I +S ++
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298
Query: 250 LATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQ 309
L+ + AVS +MF V+Y PR + +EF++P+++Y+ S+++ IG RF+MRFE +++PE+
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPER 358
Query: 310 RFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
R G + G+ D D RWP SKWRCL VRWDE+ +RVSPW I+
Sbjct: 359 RCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEID 405
>AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);
transcription factor | chr1:12577722-12580824 FORWARD
Length = 606
Score = 370 bits (951), Expect = e-103, Method: Compositional matrix adjust.
Identities = 170/340 (50%), Positives = 245/340 (72%), Gaps = 7/340 (2%)
Query: 17 AETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKIL 76
+++ +Y +LW CAGPL +P+ GE V+YFPQG+IE V+AST + ++ P+ LPSK+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQ 79
Query: 77 CRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDT 136
CRVI + LK E ++DE+YA++TL+P+ Q + + P V+SF K LTASDT
Sbjct: 80 CRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRP----LVNSFTKVLTASDT 135
Query: 137 STHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGW 196
S +GGFSV ++HA+ECLPPLDMS+ P QE++A DLH N+WRF+H +RG P+RH L +GW
Sbjct: 136 SAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGW 195
Query: 197 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRA 256
+ F++SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M V+A+A A
Sbjct: 196 NEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHA 255
Query: 257 VSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIV 316
+F V YKPR+ S+FIV +D+++++V N +++G RF MRFEG++ E+R+ GTI+
Sbjct: 256 FDNQCIFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTII 313
Query: 317 GIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
G+ D S W S+WR L+V+WDE ++ RP++VSPW IE
Sbjct: 314 GVSDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 352
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS);
transcription factor | chr1:6887353-6891182 FORWARD
Length = 902
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 239/346 (69%), Gaps = 18/346 (5%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVY-CLPSKILCRV 79
+ +ELWHACAGPLV +P+ G V+YF QGH EQV ST + A Q+P Y LPS+++C+V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHV--------HSFCKTL 131
NV L A+ D+DE+YAQ++L P + E V P P F + FCKTL
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQP--VHSERDVF------PVPDFGMLRGSKHPTEFFCKTL 162
Query: 132 TASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHL 191
TASDTSTHGGFSV RR A + PPLD S QPPTQELV +DLH N W F+HI+RGQP+RHL
Sbjct: 163 TASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHL 222
Query: 192 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLA 251
L +GWS+FV SKRL AGD+ +F+R E +L VGVRRA RQQ +PSSV+S+ SMH+ VLA
Sbjct: 223 LTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLA 282
Query: 252 TASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESV-KNNYSIGMRFKMRFEGEEAPEQR 310
A+ A + T F ++Y PR P+EF++P +Y +++ + S+GMRF M FE E++ ++R
Sbjct: 283 AAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRR 342
Query: 311 FTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+ GTIVGI D D RWP SKWR L+V WDE +P RVSPW IE
Sbjct: 343 YMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
>AT1G34170.1 | Symbols: ARF13 | transcription factor |
chr1:12444265-12446764 REVERSE
Length = 505
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 239/348 (68%), Gaps = 9/348 (2%)
Query: 11 QASARDAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYC 70
+ S +T +Y +LW+ CAGPL +P+ GE+V+YFPQGHIE +E ST D P++
Sbjct: 12 ELSVDITKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFD 71
Query: 71 LPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKT 130
LPSK+ CRV+ + K + +TDEVYAQ++L+P D V + R V+ F K
Sbjct: 72 LPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYFFSKI 127
Query: 131 LTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRH 190
LTASD S GG + +++A+EC PPLDMS+ TQ LVAKDL+G EW F+H+FRG P+RH
Sbjct: 128 LTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRH 187
Query: 191 LLQS--GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLD 248
+ S GWSVF ++KRL+ GD F+ LRGENGELR G+RRA QQG++PSSVIS++ M
Sbjct: 188 MFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHG 247
Query: 249 VLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPE 308
V+A+ A MF V YKP S S+F++ +D++++++ NNY +G RF+M+FEG++ E
Sbjct: 248 VIASVVNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE 305
Query: 309 QRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+R+ GTI+G+ D S W +S+WR LKV+WDE S RP++VSPW IE
Sbjct: 306 KRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 352
>AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPONSE FACTOR 22);
transcription factor | chr1:12556005-12559082 FORWARD
Length = 598
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/340 (52%), Positives = 246/340 (72%), Gaps = 9/340 (2%)
Query: 17 AETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKIL 76
+++ +Y +LW CAGPL +P+ GE+++YFPQG+IE VEAST + ++ P+ LPSK+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQ 79
Query: 77 CRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDT 136
CRVI + LK E ++DE YA++TL+P+ Q + + P V+SF K LTASDT
Sbjct: 80 CRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP----LVNSFTKVLTASDT 135
Query: 137 STHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGW 196
S GGF V ++HA+ECLPPLDMS+ PTQEL+A DLHGN+WRF H +RG P+RHLL +GW
Sbjct: 136 S--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGW 193
Query: 197 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRA 256
+ F +SK+LVAGD +F+RGE GELRVG+RRA QQGN+PSS+IS SM V+A+A A
Sbjct: 194 NAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHA 253
Query: 257 VSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIV 316
MF V YKPR+ S+FIV +D+++++V N +++G RF MRFEG++ E+R+ GTI+
Sbjct: 254 FDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTII 311
Query: 317 GIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
G+ D S W S+WR L+V+WDE ++ RP++VSPW IE
Sbjct: 312 GVSDF-SPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIE 350
>AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);
transcription factor | chr1:12927457-12930523 REVERSE
Length = 590
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 167/340 (49%), Positives = 239/340 (70%), Gaps = 9/340 (2%)
Query: 17 AETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKIL 76
+++ +Y +LW CAGPL +P+ GE V+YFPQG+IE V+AST + ++ P+ LPSK+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQ 79
Query: 77 CRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDT 136
CRVI + LK E ++DE YA++TL+P+ Q + + P V+SF K LTASDT
Sbjct: 80 CRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRP----LVNSFTKVLTASDT 135
Query: 137 STHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGW 196
S +GGF V ++HA+ECLPPL + P QEL+AKDLHGN+WRF+H +RG P+RH L +GW
Sbjct: 136 SAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGW 191
Query: 197 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRA 256
+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M V+A+A A
Sbjct: 192 NEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHA 251
Query: 257 VSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIV 316
+ +F V YKP S+FIV +D++++++ N + +G RF MRFEG++ E+R+ GTI+
Sbjct: 252 LDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTII 311
Query: 317 GIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
G+ D S W S+WR L+V+WDE ++ RP++VSPW IE
Sbjct: 312 GVNDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 350
>AT2G33860.1 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding /
transcription factor | chr2:14325444-14328613 REVERSE
Length = 608
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/356 (49%), Positives = 230/356 (64%), Gaps = 30/356 (8%)
Query: 17 AETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKIL 76
A + ELWHACAGPL+++P+ G V YFPQGH+EQ D +Y LP +
Sbjct: 47 AGGGVCLELWHACAGPLISLPKRGSLVLYFPQGHLEQA-------PDFSAAIYGLPPHVF 99
Query: 77 CRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVE----------------KQPSQPPPP 120
CR+++V L AE TDEVYAQV+L+PE+ E V K+ + P
Sbjct: 100 CRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTP--- 156
Query: 121 RFHVHSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQ 180
H FCKTLTASDTSTHGGFSV RR A +C PPLD S+ P+QEL+A+DLHG EWRF+
Sbjct: 157 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFR 212
Query: 181 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 240
HI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA + +G S
Sbjct: 213 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQ 272
Query: 241 SSHSMHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMR 300
+ +M+ + + + A+S ++F++ Y P+ S S FI+P ++++ V + IGMRFK R
Sbjct: 273 YNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKAR 332
Query: 301 FEGEEAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
E E+A E+R G I GI D D RWP SKWRCL VRWD+ A RVSPW IE
Sbjct: 333 VESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIE 388
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/
transcription regulator | chr5:7016704-7021504 REVERSE
Length = 1164
Score = 352 bits (903), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 182/337 (54%), Positives = 234/337 (69%), Gaps = 2/337 (0%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVY-CLPSKILCRV 79
+ +ELWHACAGPL+++P G V YFPQGH EQV AS + D +P Y LPSK++C +
Sbjct: 21 INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
NV L A+P+TDEVYAQ+TL P D +A+ R FCKTLTASDTSTH
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSV RR A + P LD S QPP QELVAKD+H N W F+HI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
VS+KRL AGD+ +F+R +L +G+RRA RQQ + SSVISS SMH+ VLA A+ A +
Sbjct: 200 VSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259
Query: 260 GTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 319
+ FT++Y PR +P+EF+VP +Y +++ S+GMRF+M FE EE +R+ GT+ GI
Sbjct: 260 NSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGIS 319
Query: 320 DADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
D D RW S+WR L++ WDE++A RP RVS W IE
Sbjct: 320 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 356
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/
transcription regulator | chr5:7016704-7021504 REVERSE
Length = 1165
Score = 347 bits (891), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 182/338 (53%), Positives = 234/338 (69%), Gaps = 3/338 (0%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVY-CLPSKILCRV 79
+ +ELWHACAGPL+++P G V YFPQGH EQV AS + D +P Y LPSK++C +
Sbjct: 21 INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
NV L A+P+TDEVYAQ+TL P D +A+ R FCKTLTASDTSTH
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSV RR A + P LD S QPP QELVAKD+H N W F+HI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
VS+KRL AGD+ +F+R +L +G+RRA RQQ + SSVISS SMH+ VLA A+ A +
Sbjct: 200 VSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259
Query: 260 GTMFTVYYKPR-TSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 318
+ FT++Y PR +P+EF+VP +Y +++ S+GMRF+M FE EE +R+ GT+ GI
Sbjct: 260 NSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 319
Query: 319 EDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
D D RW S+WR L++ WDE++A RP RVS W IE
Sbjct: 320 SDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/
transcription regulator | chr5:7016704-7021504 REVERSE
Length = 1150
Score = 347 bits (890), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 182/338 (53%), Positives = 234/338 (69%), Gaps = 3/338 (0%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVY-CLPSKILCRV 79
+ +ELWHACAGPL+++P G V YFPQGH EQV AS + D +P Y LPSK++C +
Sbjct: 21 INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
NV L A+P+TDEVYAQ+TL P D +A+ R FCKTLTASDTSTH
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSV RR A + P LD S QPP QELVAKD+H N W F+HI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
VS+KRL AGD+ +F+R +L +G+RRA RQQ + SSVISS SMH+ VLA A+ A +
Sbjct: 200 VSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259
Query: 260 GTMFTVYYKPR-TSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 318
+ FT++Y PR +P+EF+VP +Y +++ S+GMRF+M FE EE +R+ GT+ GI
Sbjct: 260 NSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 319
Query: 319 EDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
D D RW S+WR L++ WDE++A RP RVS W IE
Sbjct: 320 SDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPONSE
FACTOR 19); DNA binding / transcription factor |
chr1:6628395-6632779 REVERSE
Length = 1086
Score = 345 bits (884), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 232/337 (68%), Gaps = 2/337 (0%)
Query: 21 LYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVY-CLPSKILCRV 79
+ ++LWHACAGPLV++P G V YFPQGH EQV AS + D +P Y LPSK++C +
Sbjct: 20 INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDF-IPNYPNLPSKLICLL 78
Query: 80 INVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDTSTH 139
+V L A+ +TDEVYAQ+TL P D A+ R FCKTLTASDTSTH
Sbjct: 79 HSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTH 138
Query: 140 GGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVF 199
GGFSV RR A + PPLD S QPP QE+VAKDLH W F+HI+RGQP+RHLL +GWSVF
Sbjct: 139 GGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVF 198
Query: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSX 259
VS+KRL AGD+ +F+R E +L +G+RRA RQ + SSVISS SMH+ +LA A+ A +
Sbjct: 199 VSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANAN 258
Query: 260 GTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 319
+ FT+++ PR SPSEF+VP +Y +++ S+GMRF+M FE E+ +R+ GT+ GI
Sbjct: 259 SSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGIS 318
Query: 320 DADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
D D RW S+WR L+V WDE++A RP RVS W IE
Sbjct: 319 DLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIE 355
>AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 514
Score = 343 bits (880), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 202/254 (79%), Gaps = 6/254 (2%)
Query: 106 DENAVEKQPSQPP---PPRFHVHSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQP 162
++ +E PP P + V SF K LTASDTSTHGGFSVLR+HA ECLP LDM++
Sbjct: 13 NQKKIEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPT 72
Query: 163 PTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR 222
PTQELVA+DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LR
Sbjct: 73 PTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLR 132
Query: 223 VGVRRAMRQQGNVPSSVISSHSMHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDR 282
VGVRR +QQ +P+SVISS SM L VLATAS AV+ T+F V+YKPR S+FI+ ++
Sbjct: 133 VGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNK 190
Query: 283 YMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETS 342
YM ++KN +S+GMR++MRFEGEE+PE+ FTGTI+G D S++WP SKWR L+++WDE S
Sbjct: 191 YMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDL-SSQWPASKWRSLQIQWDEPS 249
Query: 343 AIPRPDRVSPWSIE 356
+I RP++VSPW IE
Sbjct: 250 SIQRPNKVSPWEIE 263
>AT1G34170.2 | Symbols: ARF13 | transcription factor |
chr1:12444265-12446764 REVERSE
Length = 479
Score = 328 bits (840), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 221/352 (62%), Gaps = 35/352 (9%)
Query: 7 HSRRQASARDAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQM 66
+++ + S +T +Y +LW+ CAGPL +P+ GE+V+YFPQGHIE +E ST D
Sbjct: 8 NAQPELSVDITKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIR 67
Query: 67 PVYCLPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHS 126
P++ LPSK+ CRV+ + K + +TDEVYAQ++L+P D V + R V+
Sbjct: 68 PIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYF 123
Query: 127 FCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQ 186
F K LTASD S GG + +++A+EC PPLDMS+ TQ LVAKDL+G EW F+H+FRG
Sbjct: 124 FSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGT 183
Query: 187 PRRHLLQS--GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 244
P+RH+ S GWSVF ++KRL+ GD F+ LRGENGELR G+RRA QQG++PSSVIS++
Sbjct: 184 PQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANC 243
Query: 245 MHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGE 304
M V+A+ A MF V YKPR M+FEG+
Sbjct: 244 MQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGK 275
Query: 305 EAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+ E+R+ GTI+G+ D S W +S+WR LKV+WDE S RP++VSPW IE
Sbjct: 276 DFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
>AT1G34170.3 | Symbols: | transcription factor |
chr1:12443578-12446764 REVERSE
Length = 546
Score = 327 bits (839), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 221/352 (62%), Gaps = 35/352 (9%)
Query: 7 HSRRQASARDAETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQM 66
+++ + S +T +Y +LW+ CAGPL +P+ GE+V+YFPQGHIE +E ST D
Sbjct: 8 NAQPELSVDITKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIR 67
Query: 67 PVYCLPSKILCRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHS 126
P++ LPSK+ CRV+ + K + +TDEVYAQ++L+P D V + R V+
Sbjct: 68 PIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYF 123
Query: 127 FCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQ 186
F K LTASD S GG + +++A+EC PPLDMS+ TQ LVAKDL+G EW F+H+FRG
Sbjct: 124 FSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGT 183
Query: 187 PRRHLLQS--GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 244
P+RH+ S GWSVF ++KRL+ GD F+ LRGENGELR G+RRA QQG++PSSVIS++
Sbjct: 184 PQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANC 243
Query: 245 MHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYMESVKNNYSIGMRFKMRFEGE 304
M V+A+ A MF V YKPR M+FEG+
Sbjct: 244 MQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGK 275
Query: 305 EAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAIPRPDRVSPWSIE 356
+ E+R+ GTI+G+ D S W +S+WR LKV+WDE S RP++VSPW IE
Sbjct: 276 DFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
>AT2G28350.1 | Symbols: ARF10 | ARF10 (AUXIN RESPONSE FACTOR 10);
miRNA binding / transcription factor |
chr2:12114331-12116665 FORWARD
Length = 693
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 202/384 (52%), Gaps = 51/384 (13%)
Query: 18 ETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKILC 77
E +L +LWHACAG +V +P VFYF QGH E A + A + +P ILC
Sbjct: 4 EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPR------VPPLILC 57
Query: 78 RVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVH--------SFCK 129
RV++V A+ +TDEV+A++TL+P D + PP + SF K
Sbjct: 58 RVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAK 117
Query: 130 TLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRR 189
TLT SD + GGFSV R A P LD S +PP Q ++AKD+HG W+F+HI+RG PRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRR 177
Query: 190 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA--------------------- 228
HLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGF 237
Query: 229 ---------------MRQQGNVPSSVISSHSMHLDVLATASRAVSXGTMFTVYYKPRTSP 273
M++ GN + ++ + ++ +A A + G F V Y PR S
Sbjct: 238 LRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRAST 297
Query: 274 SEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADSTRWPESKWR 332
EF V +++ + GMRFKM FE E++ F GT+ ++ AD RWP S WR
Sbjct: 298 PEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWR 357
Query: 333 CLKVRWDETSAIPRPDRVSPWSIE 356
L+V WDE + RVSPW +E
Sbjct: 358 LLQVAWDEPDLLQNVKRVSPWLVE 381
>AT4G30080.1 | Symbols: ARF16 | ARF16 (AUXIN RESPONSE FACTOR 16);
miRNA binding / transcription factor |
chr4:14703369-14705564 REVERSE
Length = 670
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 210/385 (54%), Gaps = 60/385 (15%)
Query: 18 ETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKILC 77
E L +LWHACAG +V +P +VFYFPQGH E + + V +P+ P +LC
Sbjct: 13 EKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN---AYDCVDFGNLPI---PPMVLC 66
Query: 78 RVINVLLKAEPDTDEVYAQVTLVP----EAI-------QDENAVEKQPSQPPPPRFHVHS 126
RV+ + A+ ++DEV+A++ L+P E + +D N E + P S
Sbjct: 67 RVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTP-------S 119
Query: 127 FCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQ 186
F KTLT SD + GGFSV R A P LD + +PP Q ++AKD+HG+ W+F+HI+RG
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGT 179
Query: 187 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ-GNVP--------- 236
PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA R GN P
Sbjct: 180 PRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPI 239
Query: 237 ------SSVI---SSHSMHL---------------DVLATASRAVSXGTMFTVYYKPRTS 272
SS++ S+S+ V+ A+ A+S G F V Y PR S
Sbjct: 240 GGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAIS-GRPFEVVYYPRAS 298
Query: 273 PSEFIVPFDRYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADSTRWPESKW 331
SEF V +++ + GMRFKM FE E++ F GT+ + +D RWP S W
Sbjct: 299 TSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPW 358
Query: 332 RCLKVRWDETSAIPRPDRVSPWSIE 356
R L+V WDE + RV+PW +E
Sbjct: 359 RLLQVAWDEPDLLQNVKRVNPWLVE 383
>AT1G43950.1 | Symbols: ARF23 | ARF23 (AUXIN RESPONSE FACTOR 23);
transcription factor | chr1:16672582-16673952 REVERSE
Length = 222
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 144/210 (68%), Gaps = 7/210 (3%)
Query: 17 AETALYTELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKIL 76
+++ +Y +LW CAGPL +P+ GE+V+YFPQGHIE VEAST + ++ P LPSK+
Sbjct: 20 SKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQ 79
Query: 77 CRVINVLLKAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRFHVHSFCKTLTASDT 136
CRVI + LK E ++DE Y ++TL+P+ Q E + P V+SF K LTASDT
Sbjct: 80 CRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRP----IVNSFTKVLTASDT 135
Query: 137 STHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQSGW 196
S G FSV +HA+ECLPPLDMS+ P QEL+A DLHGN+WRF+H +R PR +GW
Sbjct: 136 SAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGW 192
Query: 197 SVFVSSKRLVAGDAFIFLRGENGELRVGVR 226
+ F +SK+LV GD +F RGE GELRVG+R
Sbjct: 193 NAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT1G77850.1 | Symbols: ARF17 | ARF17 (AUXIN RESPONSE FACTOR 17);
transcription factor | chr1:29272405-29275193 FORWARD
Length = 585
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 169/372 (45%), Gaps = 54/372 (14%)
Query: 25 LWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQQMPVYCLPSKILCRVINVLL 84
+W ACAG V +P RV+YFPQGH+E + + PV C+ + ++ L
Sbjct: 20 IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPVPCI-------ITSIQL 72
Query: 85 KAEPDTDEVYAQVTLVPEAIQDENAVEKQPSQPPPPRF-----------HVHSFCKTLTA 133
A+P TDEV+A + L P Q RF V +F K LT
Sbjct: 73 LADPVTDEVFAHLILQPMTQQQFTPTNYS-------RFGRFDGDVDDNNKVTTFAKILTP 125
Query: 134 SDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQPRRHLLQ 193
SD + GGFSV R A P L+ PP Q+L D+HG W F+HI+RG PRRHLL
Sbjct: 126 SDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLT 185
Query: 194 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA------------------------- 228
+GWS FV+SK+L+AGD+ +F+R E+ +GVRR
Sbjct: 186 TGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSS 245
Query: 229 -MRQQGNVPSSVI---SSHSMHLDVLATASRAVSXGTMFTVYYKPRTSPSEFIVPFDRYM 284
++ P + + + + A S G F V + P SEF+V +
Sbjct: 246 VAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVE 305
Query: 285 ESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADSTRWPESKWRCLKVRWDETSAI 344
S+ ++ G R KM E E++ + IV ++ W S W+ L++ WDE +
Sbjct: 306 SSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEIL 365
Query: 345 PRPDRVSPWSIE 356
RV+PW +E
Sbjct: 366 QNVKRVNPWQVE 377
>AT1G01030.1 | Symbols: NGA3 | NGA3 (NGATHA3); transcription factor
| chr1:11864-12940 REVERSE
Length = 358
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 117 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNE 176
PPP + H+ F K +T SD + ++HA E PLD S L +D +G
Sbjct: 48 PPPEKEHM--FDKVVTPSDVGKLNRLVIPKQHA-ERYFPLDSSNNQNGTLLNFQDRNGKM 104
Query: 177 WRFQHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 216
WRF++ + + +++ GWS FV K+L AGD F RG
Sbjct: 105 WRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>AT4G01500.1 | Symbols: NGA4 | NGA4 (NGATHA4); transcription factor
| chr4:639791-640792 FORWARD
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 125 HSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFR 184
H F K LT SD + ++HA E PL+ ++ + +D +G WRF++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 90
Query: 185 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 216
+ +++ GWS FV K+L AGD F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>AT2G46870.1 | Symbols: NGA1 | NGA1 (NGATHA1); transcription factor
| chr2:19261313-19262245 FORWARD
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 125 HSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFR 184
H F K +T SD + ++HA E PLD S L +DL G WRF++ +
Sbjct: 33 HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91
Query: 185 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENG 219
+ +++ GWS FV K+L AGD F R G++G
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSG 128
>AT3G61970.1 | Symbols: NGA2 | NGA2 (NGATHA2); transcription factor
| chr3:22951829-22952728 FORWARD
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 125 HSFCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQE---LVAKDLHGNEWRFQH 181
H F K +T SD + ++HA E PLD S + + L +D GN WRF++
Sbjct: 21 HMFDKVVTPSDVGKLNRLVIPKQHA-ERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRY 79
Query: 182 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 215
+ + +++ GWS FV K+L AGD F R
Sbjct: 80 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>AT3G25730.1 | Symbols: | AP2 domain-containing transcription
factor, putative | chr3:9396505-9397506 FORWARD
Length = 333
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 127 FCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQE---LVAKDLHGNEWRFQHIF 183
F KT+T SD V+ +H E PL + + + L +D++G WRF++ +
Sbjct: 183 FEKTVTPSDVGKLNRL-VIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 184 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGEN 218
+ ++L GWS FV KRL AGD F R +
Sbjct: 242 WNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSND 276
>AT1G13260.1 | Symbols: RAV1 | RAV1; DNA binding / transcription
factor/ transcription repressor | chr1:4542386-4543420
FORWARD
Length = 344
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 127 FCKTLTASDTSTHGGFSVLRRHAVECLPPLDMSRQPPTQELVAKDLHGNEWRFQHIFRGQ 186
F K +T SD + + HA + P + L +D++G WRF++ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 187 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVG 224
+ ++L GWS FV K L AGD F R G++ +L +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287