Jatropha Genome Database

JcCB0086571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0086571.10 - phase: 0 
         (386 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10370.1 | Symbols: SDP6 | SDP6 (SUGAR-DEPENDENT 6); glycerol...   543   e-155

>AT3G10370.1 | Symbols: SDP6 | SDP6 (SUGAR-DEPENDENT 6);
           glycerol-3-phosphate dehydrogenase |
           chr3:3216502-3219027 FORWARD
          Length = 629

 Score =  543 bits (1398), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 258/367 (70%), Positives = 293/367 (79%), Gaps = 12/367 (3%)

Query: 26  FLSPTFATNDHGVRPALDPVKQKITDPNAVVPSRAAQESVLIGATTANPLDXXXXXXXXX 85
           +LSP+ A++D G  P LD +++++ DP A VPSR+AQES LI AT ++PLD         
Sbjct: 25  YLSPSVASSDKGGGPILDSLRRRLGDPTASVPSRSAQESALIAATASDPLDVLVIGGGAT 84

Query: 86  XXXXXXXXXXRGLRVGLVERDDFSSG------------VRYLEKAVFNLDYGQLRLVFHA 133
                     RGLRVGLVER+DFSSG            VRYLEKAVFNLDYGQL+LVFHA
Sbjct: 85  GSGVALDAVTRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHA 144

Query: 134 LEERKQVIDNAPHLCHALPCMTPCFDWFEVVYYWMGLKMYDLVAGPRLLHLSRYYSAQES 193
           LEERKQ+I+NAPHLCHALPCMTPCFDWFEV+Y+WMGLKMYDLVAGPRLLHLSRYYSA+ES
Sbjct: 145 LEERKQLIENAPHLCHALPCMTPCFDWFEVIYFWMGLKMYDLVAGPRLLHLSRYYSAKES 204

Query: 194 LELFPTLAKKGKDKTLKGTVVYYDGQMNDSRXXXXXXXXXXXXXXXXXXXXEVISFLKDE 253
           +ELFPTLA+KGKDK L+GTVVYYDGQMNDSR                    EV+S + D+
Sbjct: 205 IELFPTLARKGKDKNLRGTVVYYDGQMNDSRLNVGLACTAALAGAAVLNHAEVVSLITDD 264

Query: 254 ADERIIGARIRDNLSGKEFETYAKVVVNAAGPFCDSVRKMAKNDAQPMICPSSGVHIILP 313
           A +RIIGARIR+NL+G+EF +YAKVVVNAAGPFCDS+RKM   D +PMICPSSGVHI+LP
Sbjct: 265 ATKRIIGARIRNNLTGQEFNSYAKVVVNAAGPFCDSIRKMIDEDTKPMICPSSGVHIVLP 324

Query: 314 DYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSNTIITPLPEPHEDEIQFILDAIS 373
           DYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSNT IT LPEPHEDEIQFILDAIS
Sbjct: 325 DYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSNTSITSLPEPHEDEIQFILDAIS 384

Query: 374 DYLSVKV 380
           DYL++KV
Sbjct: 385 DYLNIKV 391