Jatropha Genome Database

JcCB0085161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0085161.10 - phase: 0 /partial
         (96 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22080.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   134   1e-32
AT1G65280.1 | Symbols:  | heat shock protein binding | chr1:2424...    66   4e-12
AT5G05750.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    47   2e-06

>AT5G22080.1 | Symbols:  | DNAJ heat shock N-terminal
          domain-containing protein | chr5:7310600-7313540
          REVERSE
          Length = 246

 Score =  134 bits (337), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 60/76 (78%), Positives = 67/76 (88%)

Query: 12 TDDDLLLKSFFAEVSEVERDNEVLRILACFKLNPFEHLNLPFDSSPEDVKKQYRKLSLLV 71
           DDD +LKSF AEV EVERDNEV RIL+CFKLNPFEHLNL FDSS +DVK+QYRK+SL+V
Sbjct: 6  VDDDAILKSFLAEVGEVERDNEVGRILSCFKLNPFEHLNLSFDSSTDDVKRQYRKISLMV 65

Query: 72 HPDKCKHPQAKEAFAG 87
          HPDKCKHPQA+EAF  
Sbjct: 66 HPDKCKHPQAQEAFGA 81


>AT1G65280.1 | Symbols:  | heat shock protein binding |
           chr1:24245501-24248521 FORWARD
          Length = 588

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 44/64 (68%)

Query: 22  FAEVSEVERDNEVLRILACFKLNPFEHLNLPFDSSPEDVKKQYRKLSLLVHPDKCKHPQA 81
            A  +E ER  EV RI+     +P++ L +  + + +++KK+Y KLSLLVHPDKC HPQA
Sbjct: 283 VASSNEAERFEEVTRIMEADANSPYDVLGVNHNMAADNMKKRYWKLSLLVHPDKCSHPQA 342

Query: 82  KEAF 85
           +EAF
Sbjct: 343 QEAF 346


>AT5G05750.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr5:1727595-1728479 FORWARD
          Length = 294

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 46  FEHLNLPFDSSPEDVKKQYRKLSLLVHPDKCKHPQAKEAF 85
           +E L L  + S ED++K YRKLSL VHPDK K P ++EAF
Sbjct: 116 YEILGLKSNCSVEDLRKSYRKLSLKVHPDKNKAPGSEEAF 155