Jatropha Genome Database

JcCB0084971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0084971.10 + phase: 0 /pseudo/partial
         (185 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10760.1 | Symbols: EMB1706, MTA | MTA (MRNA ADENOSINE METHYL...   250   3e-67
AT4G09980.1 | Symbols: EMB1691 | EMB1691 (EMBRYO DEFECTIVE 1691)...    72   2e-13

>AT4G10760.1 | Symbols: EMB1706, MTA | MTA (MRNA ADENOSINE
           METHYLASE); S-adenosylmethionine-dependent
           methyltransferase/ methyltransferase |
           chr4:6619947-6623312 REVERSE
          Length = 685

 Score =  250 bits (639), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 119/152 (78%), Positives = 129/152 (84%)

Query: 24  LSLAVSVWRFGGYNRVEEIIWVKTNQLQRIIRTGRTGH*LNHSKEHCLVGILGNPEVNRN 83
           + L        GY RVEEIIWVKTNQLQRIIRTGRTGH LNHSKEHCLVGI GNPEVNRN
Sbjct: 524 MELGRECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNPEVNRN 583

Query: 84  IDTDLIVAEVRETSR*PDEMYPVLERISPRTRTLELFARMHNTHAGWMSLGNQLGGVRLV 143
           IDTD+IVAEVRETSR PDEMY +LERI PR R LELFARMHN HAGW+SLGNQL GVRL+
Sbjct: 584 IDTDVIVAEVRETSRKPDEMYAMLERIMPRARKLELFARMHNAHAGWLSLGNQLNGVRLI 643

Query: 144 DEGLRARFKAAYPDVVVQSPSPPWASAMEIDS 175
           +EGLRARFKA+YP++ VQ PSPP ASAME D+
Sbjct: 644 NEGLRARFKASYPEIDVQPPSPPRASAMETDN 675


>AT4G09980.1 | Symbols: EMB1691 | EMB1691 (EMBRYO DEFECTIVE 1691);
           S-adenosylmethionine-dependent methyltransferase/
           methyltransferase/ nucleic acid binding |
           chr4:6247978-6252030 REVERSE
          Length = 963

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 20/118 (16%)

Query: 35  GYNRVEEIIWVKTNQ------LQRIIRTGRTGH*LNHSKEHCLVGILGNPE-------VN 81
           G+ R E+I WVKTN+      L+   RT         SKEHCL+GI G          ++
Sbjct: 705 GFRRCEDICWVKTNKSNAAPTLRHDSRT-----VFQRSKEHCLMGIKGTVRRSTDGHIIH 759

Query: 82  RNIDTDLIVAEVRE--TSR*PDEMYPVLERISPRTRTLELFARMHNTHAGWMSLGNQL 137
            NIDTD+I+AE     +++ P++MY ++E  +   R LELF   HN  AGW+++G  L
Sbjct: 760 ANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTVGKGL 817