Jatropha Genome Database

JcCB0084921.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0084921.20 - phase: 0 
         (263 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61600.1 | Symbols:  | unknown protein | chr1:22729816-227311...   307   5e-84
AT1G13540.1 | Symbols:  | unknown protein | chr1:4635474-4636708...   171   3e-43
AT1G13530.1 | Symbols:  | unknown protein | chr1:4633740-4635129...   171   5e-43
AT1G13480.1 | Symbols:  | unknown protein | chr1:4622783-4624043...   171   6e-43
AT1G13510.1 | Symbols:  | unknown protein | chr1:4629459-4630687...   164   5e-41
AT1G13520.1 | Symbols:  | unknown protein | chr1:4631857-4633223...   160   9e-40
AT1G13500.1 | Symbols:  | unknown protein | chr1:4627789-4629169...   159   1e-39
AT1G13550.1 | Symbols:  | unknown protein | chr1:4637072-4638315...   155   2e-38
AT1G13490.1 | Symbols:  | unknown protein | chr1:4624715-4626064...   155   3e-38
AT1G13470.1 | Symbols:  | unknown protein | chr1:4620322-4621542...   152   2e-37

>AT1G61600.1 | Symbols:  | unknown protein | chr1:22729816-22731182
           FORWARD
          Length = 421

 Score =  307 bits (786), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 147/262 (56%), Positives = 188/262 (71%), Gaps = 8/262 (3%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVTR LS +RK+   LSEE PEGP+SG LVITDEE E E+TFCFG C +T++ KLP PQ
Sbjct: 1   MYVTRTLSQFRKYQKTLSEESPEGPFSGVLVITDEEAETEDTFCFGMCTRTKIEKLPLPQ 60

Query: 61  DKILNVVHL--SENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDMG 118
           DKIL+VVHL  S N+ET+ KK  F+P L Q LSSN YYV+ A+GRHKG+   CSR+++ G
Sbjct: 61  DKILSVVHLDSSGNRETSVKKVLFIPALDQPLSSNRYYVVHARGRHKGKVSVCSREIEKG 120

Query: 119 LLCCFKKVIKDIRPRPLDPRNTYQEFKISSHYNHSFFAKSLAPYAYPPKLLRNKGWELRI 178
            +CCF  ++ D +P+PLDPRN YQ  KI+ H++ +F+AKS+AP   PP  L+ KGWE   
Sbjct: 121 -VCCFPDILHDKKPKPLDPRNIYQTVKINRHHDRTFYAKSVAPDGTPPTFLKKKGWE--- 176

Query: 179 SLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKEENAR 238
            LR+SR L P     ALGLD   R +LP F FP+S+  S SV +G WYCPFMF+K EN  
Sbjct: 177 -LRTSRSLHPRRPREALGLDEELRARLPAFGFPVSTIRSGSVIVGEWYCPFMFVK-ENCS 234

Query: 239 IREQMNRSILYRMSLEQYWEEI 260
           + +QM +S+ YR++L QYWE I
Sbjct: 235 VSQQMRKSMFYRITLSQYWERI 256


>AT1G13540.1 | Symbols:  | unknown protein | chr1:4635474-4636708
           REVERSE
          Length = 381

 Score =  171 bits (434), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 145/266 (54%), Gaps = 20/266 (7%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFG--FCKKTRVGKLPF 58
           MY+TR  S YR+ P+ L++ PPEGP SG LVI D+ +    T CFG      + +  LP 
Sbjct: 1   MYITRSFSEYRRNPAELTQPPPEGPNSGILVIQDQHSRTRATSCFGSWLVVDSSLSGLPL 60

Query: 59  PQDKILNVVHLSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDMG 118
           PQ+  L V       ++T     F+PVL + LSSNCYY IK  G+H G+A   +++ D+ 
Sbjct: 61  PQNLKLAVTFNIGGDDSTRDPVVFIPVLDKPLSSNCYYAIKRHGKHSGEASGSAKEDDI- 119

Query: 119 LLCCF-KKVIKDIRPRPLDPRNTYQEFKISSHYNHS--FFAKSLAPYAYPPKLLRNKGWE 175
           + CCF    + + +P+ LDP + YQ+FKI      S  ++A S+AP   PP  LR K W 
Sbjct: 120 VSCCFCSSFVPEAKPKQLDPFDMYQQFKIHQKEPSSRCYYATSVAPDGVPPWFLRKKEWT 179

Query: 176 LRISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKEE 235
           +  S     +L+      A GL +  RT+LP            S  +G WY PF+F+KE 
Sbjct: 180 VEYSRFQDFELR----DDAKGLITELRTELPLLGM--------STVVGKWYVPFIFVKER 227

Query: 236 NARIREQMNRSILYRMSLEQYWEEIL 261
              +++Q+  S+ Y M+LEQ W+E+ 
Sbjct: 228 E--VKDQIKNSMYYSMTLEQRWKELF 251


>AT1G13530.1 | Symbols:  | unknown protein | chr1:4633740-4635129
           REVERSE
          Length = 385

 Score =  171 bits (433), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 150/267 (56%), Gaps = 20/267 (7%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVT+ LS Y++ PS L+  P EGP SG LVI DEE++   T CFG C    +  LPFPQ
Sbjct: 1   MYVTKRLSEYQRNPSELTFLPTEGPNSGVLVIQDEESQP--TCCFGKCFGCDLNGLPFPQ 58

Query: 61  DKILNV---VHLSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDM 117
           +  + V   +   +++        F+PVL Q  SSN YYVI+ +G+H G+AC  +++ D 
Sbjct: 59  NTRVTVKYQIGHGDDRIVLLDSVAFIPVLHQPPSSNLYYVIRRRGKHAGEACVSAKEEDK 118

Query: 118 GLLCCFKKVIKDIRPRPLDPRNTYQEFKISSHYNHS--FFAKSLAPYAYPPKLLRNKGWE 175
              C     + +  PR LDP + YQ+F+I    + +  FFA S+A    PP+ LR KGW 
Sbjct: 119 VSCCLCFTYVSNATPRLLDPFDIYQQFEIHQRGSSTRKFFATSVASDGIPPRFLRRKGWT 178

Query: 176 LRISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKEE 235
           +     S+ +   LI+     +D+  R +LP+F          SV +G WY PF+F+KE 
Sbjct: 179 VPF---SASQDYGLIDDAKGVVDAKLRYELPDF--------GKSVVVGKWYVPFLFVKEG 227

Query: 236 NARIREQMNRSILYRMSLEQYWEEILL 262
           +A  ++QM +S+ Y M+L Q +EE+  
Sbjct: 228 DA--KDQMKKSMYYSMTLHQRFEEVFF 252


>AT1G13480.1 | Symbols:  | unknown protein | chr1:4622783-4624043
           REVERSE
          Length = 387

 Score =  171 bits (432), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/271 (39%), Positives = 149/271 (54%), Gaps = 27/271 (9%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVTR LS Y+K PS L   PPEGP SG +VI DEE++A  T CFG C + R+  LPFPQ
Sbjct: 1   MYVTRRLSEYQKKPSELKLLPPEGPNSGIMVIQDEESQA--TCCFGSCYEGRLKGLPFPQ 58

Query: 61  DKILNVVHLS---ENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDM 117
           +  LN  + S   E+Q T      F+PVL Q LSSN YYV++ +G+H G+A   + + + 
Sbjct: 59  NVKLNAAYTSGGGEHQTTHLTPVVFIPVLDQPLSSNLYYVLQRRGKHTGKASASATEEER 118

Query: 118 GLLC-CFKKVIKDIRPRPLDPRNTYQEFKISSHYNHS--FFAKSLAPYAYPPKLLRNKGW 174
              C CF   I D +P+  DP + YQ+F+I    + S  + A S+A    PP  L+ K W
Sbjct: 119 VSSCFCF-SYIPDAKPQEADPYDIYQQFEIHQRRSSSRYYSATSVASDGVPPNYLKRKDW 177

Query: 175 ELRISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSS---SVTIGTWYCPFMF 231
            +  S             H  GL   A+    N    + S+ +S   S+ IG WY PF+F
Sbjct: 178 WVSYS-----------TSHDFGLRDDAKG--INTKLRLDSELTSLGKSIEIGKWYVPFIF 224

Query: 232 IKEENARIREQMNRSILYRMSLEQYWEEILL 262
           + E    +++QMN+S  Y ++L+Q WEE+  
Sbjct: 225 VME--GDVKDQMNKSTFYSVTLQQRWEEVFF 253


>AT1G13510.1 | Symbols:  | unknown protein | chr1:4629459-4630687
           REVERSE
          Length = 380

 Score =  164 bits (415), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 145/269 (53%), Gaps = 27/269 (10%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFC--KKTRVGKLPF 58
           MYVTR LS Y++ P+ L + PPEGP SG LVI D+ ++     CFG C    + +  LP 
Sbjct: 1   MYVTRCLSEYQRNPAELRQPPPEGPNSGILVIQDQHSQTRPC-CFGLCLVVDSYLSGLPL 59

Query: 59  PQDKILNVVHLSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDMG 118
           PQ+  L     +   + T     F+PVL + LSSNCYY IK  G+H G+A    ++ D  
Sbjct: 60  PQNLKLAARFNAGEDDATCDPVVFIPVLNKPLSSNCYYAIKRVGKHSGEAPASGKEEDR- 118

Query: 119 LLCCF-KKVIKDIRPRPLDPRNTYQEFKI-----SSHYNHSFFAKSLAPYAYPPKLLRNK 172
           + CCF    + + +P+ LDP + YQ+F I     SS Y   ++A S+AP    P  L+  
Sbjct: 119 VPCCFCSSYVPEAKPKQLDPYDMYQQFMIHQKKPSSRY---YYATSVAPDGVSPWFLKKN 175

Query: 173 GWELRISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFI 232
            W +  S     +L+      A GL++  RT+LP            SV +G WY PF+F+
Sbjct: 176 KWTVEYSRFQDFELK----DDAKGLNTELRTELPGLGM--------SVVVGKWYVPFIFV 223

Query: 233 KEENARIREQMNRSILYRMSLEQYWEEIL 261
           KE +  + +Q+ RS+ Y M+LEQ WEE+ 
Sbjct: 224 KERD--VEDQIKRSMYYSMTLEQRWEEVF 250


>AT1G13520.1 | Symbols:  | unknown protein | chr1:4631857-4633223
           REVERSE
          Length = 387

 Score =  160 bits (404), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 22/266 (8%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVTR LS Y++  S L+   PEGP SG LVI DEE++   T CFG C    +  LPFPQ
Sbjct: 1   MYVTRHLSEYQRNSSDLTRSLPEGPNSGVLVIQDEESKP--TCCFGNCYDGELKGLPFPQ 58

Query: 61  DKILNVVH---LSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDM 117
           +  L V +      ++ +   +  F+PVL Q   SN YYVIK +G+  G A   +++ D 
Sbjct: 59  NAKLTVTYRTGTGNDRRSYHDQVLFIPVLDQPYYSNRYYVIKRRGKQSGGASASAKEEDR 118

Query: 118 GLLCCF-KKVIKDIRPRPLDPRNTYQEFKISSHYNHS--FFAKSLAPYAYPPKLLRNKGW 174
            + CCF    + +++P+  DP + YQ+F++      S  + A S+AP   PP+ L+ K W
Sbjct: 119 -VPCCFCFSYVPEVKPQEADPYDIYQQFEVHQRKPSSGYYTATSVAPNGIPPEFLKRKYW 177

Query: 175 ELRISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKE 234
            +  S      L       A G++++ R++LPN         ++SV +G WY PF+F+KE
Sbjct: 178 TVEYSNSQDFGL----TDDAKGINTTLRSKLPN-------DMNTSVVVGKWYVPFIFVKE 226

Query: 235 ENARIREQMNRSILYRMSLEQYWEEI 260
            +A  ++Q+  S  Y M+L+Q WEE+
Sbjct: 227 RDA--KDQIKSSPYYSMTLKQRWEEV 250


>AT1G13500.1 | Symbols:  | unknown protein | chr1:4627789-4629169
           REVERSE
          Length = 386

 Score =  159 bits (403), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 143/267 (53%), Gaps = 20/267 (7%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVT+ LS Y++ PS L+  P EGP SG LVI DEE+      CF       +  LPFPQ
Sbjct: 1   MYVTKRLSEYKRNPSELTLLPTEGPNSGVLVIQDEESRPTLKCCFVNSFDWELNGLPFPQ 60

Query: 61  DKILNVVHLSENQETTA---KKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDM 117
               N   + + Q  TA       F+PVL Q  SSN YYVI+  G+H G+AC  +++ D 
Sbjct: 61  ----NTRVIVKRQIGTALYLDPVAFIPVLHQPPSSNLYYVIRGSGKHTGEACVSAKEGDR 116

Query: 118 GLLCCFKKVIKDIRPRPLDPRNTYQEFKISSHYNHS--FFAKSLAPYAYPPKLLRNKGWE 175
              C     I +  PRPLDP +  Q+F+I    + +  FFA S+A    PP+ L  KGW 
Sbjct: 117 ASCCFCFTYIPEAVPRPLDPFDINQQFEIHQGRSSTKKFFATSVASDGIPPQFLTRKGWS 176

Query: 176 LRISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKEE 235
           +  S         LI+     +D+  R +LP+ D        +SV +G WY PF+F+KE 
Sbjct: 177 VIFSAPEVEDYG-LIDDAKGIVDAKLRYELPDLD--------NSVVVGKWYVPFLFVKEG 227

Query: 236 NARIREQMNRSILYRMSLEQYWEEILL 262
           +A  ++QM +S+ Y M+L+Q +EE+  
Sbjct: 228 DA--KDQMYKSMYYSMTLQQRFEEVFF 252


>AT1G13550.1 | Symbols:  | unknown protein | chr1:4637072-4638315
           REVERSE
          Length = 388

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/272 (37%), Positives = 142/272 (52%), Gaps = 26/272 (9%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVTR LS YRK PS L + PPEGP SG LVI DEE+    T CFG C +  +  LPFPQ
Sbjct: 1   MYVTRRLSEYRKNPSELKKPPPEGPNSGVLVIQDEESLT--TCCFGLCNEIFLRGLPFPQ 58

Query: 61  DKILNVVHLSENQETTAKK--FWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDMG 118
           +  L V      Q  T  +    F+PVLGQ LSSN YY  +  G +  ++   +      
Sbjct: 59  NAALTVRRDDGGQNNTVHRDPVVFIPVLGQPLSSNRYYTYERCGYYSRESSTSTEKEVER 118

Query: 119 LLCCFKKVIKDI----RPRPLDPRNTYQEFKISSHYNHS---FFAKSLAPYAYPPKLLRN 171
           + CCF      +    +P+P DP + +Q+  I++  + S   +FAK +AP A  P  L  
Sbjct: 119 VTCCFCIRFNHVHMYKKPQP-DPYDIHQQVVITTTSSPSRCYYFAKPVAPNALLPAFLMR 177

Query: 172 KGWELRISLRSSRKLQPL-INHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFM 230
           +GW +     S+  LQ   +   A GL+   R++LP  D         SV +G WY PF+
Sbjct: 178 QGWTIE---NSTSTLQDFGLIDDAKGLNLELRSKLPGLDI--------SVVVGKWYVPFI 226

Query: 231 FIKEENARIREQMNRSILYRMSLEQYWEEILL 262
           F+KE    I +Q+  S+ Y M+L Q WEE+  
Sbjct: 227 FVKE--GDIIDQVKISMYYNMTLHQRWEEVFF 256


>AT1G13490.1 | Symbols:  | unknown protein | chr1:4624715-4626064
           REVERSE
          Length = 363

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 134/264 (50%), Gaps = 36/264 (13%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVT+ LS Y+K PS L+  P EGP SG LVI DEE+      CFG C   ++  LPFPQ
Sbjct: 1   MYVTKRLSEYQKNPSELTSLPTEGPNSGVLVIQDEESRT--PCCFGKCFDWKLHGLPFPQ 58

Query: 61  DKILNVVHLSENQETTAKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDMGLL 120
           +  +  V     +        F+PVL Q LSSN YYVI+  G+  G              
Sbjct: 59  NTKVT-VRFQVGKVVYLDPVAFIPVLHQPLSSNLYYVIRQSGKQTG-------------- 103

Query: 121 CCFKKVIKDIRPRPLDPRNTYQEFKIS--SHYNHSFFAKSLAPYAYPPKLLRNKGWELRI 178
                 I D  PRPLDP + YQ+F+I      N  FFA S+A    PP+ L  KGW   +
Sbjct: 104 -----FIPDADPRPLDPFDIYQQFEIHQRGSSNQKFFATSVASEGIPPQFLTRKGW---V 155

Query: 179 SLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKEENAR 238
           +     +   LI+     +D+  R +LP+ D         SV +G WY PF+F+K E   
Sbjct: 156 AASLPFEEYGLIDDAKGVVDAKLRYELPDLD--------KSVVVGKWYVPFLFVK-EGGD 206

Query: 239 IREQMNRSILYRMSLEQYWEEILL 262
             +QMN+S+ Y M+L+Q +EE+  
Sbjct: 207 ANDQMNKSMYYSMTLQQRFEEVFF 230


>AT1G13470.1 | Symbols:  | unknown protein | chr1:4620322-4621542
           REVERSE
          Length = 379

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/266 (38%), Positives = 147/266 (55%), Gaps = 26/266 (9%)

Query: 1   MYVTRPLSLYRKFPSALSEEPPEGPYSGYLVITDEETEAENTFCFGFCKKTRVGKLPFPQ 60
           MYVTR LS Y++  S L    PE P SG L+I DEE+    T CFG C +  +  LPFPQ
Sbjct: 1   MYVTRRLSEYQRNRSEL----PESPNSGVLIIQDEESRP--TCCFGSCYRATLKGLPFPQ 54

Query: 61  DK--ILNVVHLSENQETT-AKKFWFVPVLGQLLSSNCYYVIKAKGRHKGQACRCSRDMDM 117
           +   I++   +  NQ  T      F+PVL Q LSSN YYVIK  G+H G+A   +++ D 
Sbjct: 55  NANLIVSESRIFLNQTITYIDPVVFIPVLDQPLSSNRYYVIKRGGKHSGKASANAKEEDR 114

Query: 118 GLLCCF-KKVIKDIRPRPLDPRNTYQEFKISSHYNHS--FFAKSLAPYAYPPKLLRNKGW 174
            + CCF    + + +P+  DP + YQ+F+I    + S  + A S+AP   PP+ L+ K W
Sbjct: 115 -VPCCFCFSYVPEAKPQEADPNDIYQQFQIHQKRSSSRYYTATSVAPNGKPPEFLKRKYW 173

Query: 175 ELRISLRSSRKLQPLINHHALGLDSSARTQLPNFDFPISSQTSSSVTIGTWYCPFMFIKE 234
               S      L+      A G+ +  R++LP+ DF      ++SV +G WY PF+F+KE
Sbjct: 174 NAEYSTSEDFGLK----DDAKGIYTEIRSELPS-DF------NTSVVVGKWYVPFIFVKE 222

Query: 235 ENARIREQMNRSILYRMSLEQYWEEI 260
            NA  ++Q+  S  Y M L Q WEE+
Sbjct: 223 GNA--KDQLKSSAYYSMILLQRWEEV 246