Jatropha Genome Database
- JcCB0084431.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0084431.10 + phase: 0 /partial
(379 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26050.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 5e-13
AT5G40700.1 | Symbols: | unknown protein | chr5:16292047-162934... 67 2e-11
AT5G40700.2 | Symbols: | unknown protein | chr5:16292047-162934... 67 2e-11
AT5G40700.3 | Symbols: | unknown protein | chr5:16292361-162934... 67 2e-11
AT3G27350.1 | Symbols: | unknown protein | chr3:10126238-101276... 66 3e-11
AT3G01710.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 1e-09
AT3G01710.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 1e-09
AT1G70950.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 1e-09
AT1G24160.1 | Symbols: | unknown protein | chr1:8553669-8555830... 61 1e-09
AT1G70100.4 | Symbols: | unknown protein | chr1:26403736-264057... 60 2e-09
AT1G70100.3 | Symbols: | unknown protein | chr1:26403736-264058... 60 2e-09
AT1G70100.1 | Symbols: | unknown protein | chr1:26403736-264055... 60 2e-09
AT1G70100.2 | Symbols: | unknown protein | chr1:26403736-264055... 60 2e-09
AT1G23060.1 | Symbols: | unknown protein | chr1:8170946-8172739... 58 1e-08
>AT3G26050.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 11 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27350.1); Has 5651
Blast hits to 1894 proteins in 233 species: Archae - 0;
Bacteria - 757; Metazoa - 997; Fungi - 564; Plants -
231; Viruses - 18; Other Eukaryotes - 3084 (source:
NCBI BLink). | chr3:9521907-9524241 FORWARD
Length = 533
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 3 ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
ETLAW +WS F+ NRYLEEVE+F+KPGSVA+KKA+FE
Sbjct: 43 ETLAWARWSAFTQNRYLEEVERFTKPGSVAEKKAFFE 79
>AT5G40700.1 | Symbols: | unknown protein |
chr5:16292047-16293443 REVERSE
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 1 MSETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
M+E L W KWS+FSH +Y++E E+FS+PGSVAQKKA+FE
Sbjct: 41 MTENLEWGKWSSFSHKKYVDEAEKFSQPGSVAQKKAFFE 79
>AT5G40700.2 | Symbols: | unknown protein |
chr5:16292047-16293443 REVERSE
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 1 MSETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
M+E L W KWS+FSH +Y++E E+FS+PGSVAQKKA+FE
Sbjct: 41 MTENLEWGKWSSFSHKKYVDEAEKFSQPGSVAQKKAFFE 79
>AT5G40700.3 | Symbols: | unknown protein |
chr5:16292361-16293443 REVERSE
Length = 258
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 1 MSETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
M+E L W KWS+FSH +Y++E E+FS+PGSVAQKKA+FE
Sbjct: 41 MTENLEWGKWSSFSHKKYVDEAEKFSQPGSVAQKKAFFE 79
>AT3G27350.1 | Symbols: | unknown protein |
chr3:10126238-10127600 FORWARD
Length = 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 1 MSETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
M+E L W KWS+FSH +Y+EE E++S+PGSVAQKKA+FE
Sbjct: 41 MTENLEWGKWSSFSHKKYVEEAEKYSRPGSVAQKKAFFE 79
>AT3G01710.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27350.1); Has 1029
Blast hits to 851 proteins in 111 species: Archae - 0;
Bacteria - 24; Metazoa - 456; Fungi - 52; Plants - 192;
Viruses - 7; Other Eukaryotes - 298 (source: NCBI
BLink). | chr3:259952-261738 REVERSE
Length = 391
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 1 MSETLAWEKWSTFS-HNRYLEEVEQFSKPGSVAQKKAYFE 39
MSE L WEKWS FS N Y+ E E++SKPGSVAQKKA+FE
Sbjct: 34 MSEKLDWEKWSAFSTQNPYVAEAERYSKPGSVAQKKAFFE 73
>AT3G01710.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27350.1); Has 1478
Blast hits to 1129 proteins in 153 species: Archae - 0;
Bacteria - 54; Metazoa - 662; Fungi - 96; Plants - 192;
Viruses - 10; Other Eukaryotes - 464 (source: NCBI
BLink). | chr3:259952-261738 REVERSE
Length = 388
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Query: 1 MSETLAWEKWSTFS-HNRYLEEVEQFSKPGSVAQKKAYFE 39
MSE L WEKWS FS N Y+ E E++SKPGSVAQKKA+FE
Sbjct: 34 MSEKLDWEKWSAFSTQNPYVAEAERYSKPGSVAQKKAFFE 73
>AT1G70950.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23060.1); Has 875
Blast hits to 771 proteins in 143 species: Archae - 0;
Bacteria - 102; Metazoa - 281; Fungi - 65; Plants -
205; Viruses - 3; Other Eukaryotes - 219 (source: NCBI
BLink). | chr1:26752779-26755242 FORWARD
Length = 478
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 3 ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
E L+WEK S+FSHNRYLEEV++ SKPGSV + KA+FE
Sbjct: 31 EGLSWEKRSSFSHNRYLEEVDKCSKPGSVTEMKAHFE 67
>AT1G24160.1 | Symbols: | unknown protein | chr1:8553669-8555830
REVERSE
Length = 540
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 3 ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
++L+WEK+S FS N+YLEEV + + PGSVAQKKAYFE
Sbjct: 47 DSLSWEKFSAFSPNKYLEEVGKCATPGSVAQKKAYFE 83
>AT1G70100.4 | Symbols: | unknown protein |
chr1:26403736-26405770 FORWARD
Length = 482
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 3 ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
++L+WEK+S+FS N+YLEEVE+ + GSVAQKKAYFE
Sbjct: 37 DSLSWEKFSSFSPNKYLEEVEKCATAGSVAQKKAYFE 73
>AT1G70100.3 | Symbols: | unknown protein |
chr1:26403736-26405832 FORWARD
Length = 504
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 3 ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
++L+WEK+S+FS N+YLEEVE+ + GSVAQKKAYFE
Sbjct: 37 DSLSWEKFSSFSPNKYLEEVEKCATAGSVAQKKAYFE 73
>AT1G70100.1 | Symbols: | unknown protein |
chr1:26403736-26405544 FORWARD
Length = 467
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 3 ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
++L+WEK+S+FS N+YLEEVE+ + GSVAQKKAYFE
Sbjct: 37 DSLSWEKFSSFSPNKYLEEVEKCATAGSVAQKKAYFE 73
>AT1G70100.2 | Symbols: | unknown protein |
chr1:26403736-26405544 FORWARD
Length = 467
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 3 ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
++L+WEK+S+FS N+YLEEVE+ + GSVAQKKAYFE
Sbjct: 37 DSLSWEKFSSFSPNKYLEEVEKCATAGSVAQKKAYFE 73
>AT1G23060.1 | Symbols: | unknown protein | chr1:8170946-8172739
REVERSE
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 3 ETLAWEKWSTFSHNRYLEEVEQFSKPGSVAQKKAYFE 39
E+L+WE+ S+FS N YLEE E+FSKPGSV Q +A+FE
Sbjct: 31 ESLSWERRSSFSRNIYLEEAERFSKPGSVTQMRAHFE 67