Jatropha Genome Database
- JcCB0083791.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0083791.10 + phase: 0 /pseudo/partial
(341 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13560.1 | Symbols: | malate oxidoreductase, putative | chr2... 426 e-119
AT4G00570.1 | Symbols: | malate oxidoreductase, putative | chr4... 270 7e-73
AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzym... 147 1e-35
AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzym... 134 6e-32
AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzym... 130 2e-30
AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzym... 129 2e-30
>AT2G13560.1 | Symbols: | malate oxidoreductase, putative |
chr2:5650089-5655103 FORWARD
Length = 623
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/255 (79%), Positives = 228/255 (89%)
Query: 84 GVLNAARKTMARMLGNNESAFESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASR 143
GVLNAARKTMARMLGN E+AF+SA+SQFWVVDAQGLITE R NIDPEA PFARK KE R
Sbjct: 351 GVLNAARKTMARMLGNTETAFDSAQSQFWVVDAQGLITEGRENIDPEAQPFARKTKEMER 410
Query: 144 QGLREGASLVEVVREVKPDVLLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAE 203
QGL+EGA+LVEVVREVKPDVLLGLSAVGGLFSKEVLEA+KGSTSTRPA+FAMSNPTKNAE
Sbjct: 411 QGLKEGATLVEVVREVKPDVLLGLSAVGGLFSKEVLEAMKGSTSTRPAIFAMSNPTKNAE 470
Query: 204 CTPEEAFSILGDNIIFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIIS 263
CTP++AFSILG+N+IFASGSPFK+V+ GNGHVGHCNQGNNMYLFPGIGLGTLLSG+ I+S
Sbjct: 471 CTPQDAFSILGENMIFASGSPFKNVEFGNGHVGHCNQGNNMYLFPGIGLGTLLSGAPIVS 530
Query: 264 DGMLQAAAECLAAYMTEEEVLQGVIYPSTSRIRDITKQXXXXXXXXXXXXDLAEGYREMD 323
DGMLQAA+ECLAAYM+EEEVL+G+IYP SRIRDITK+ DL EGYREMD
Sbjct: 531 DGMLQAASECLAAYMSEEEVLEGIIYPPISRIRDITKRIAAAVIKEAIEEDLVEGYREMD 590
Query: 324 ARELRKLNEVHILSF 338
ARE++KL+E ++ +
Sbjct: 591 AREIQKLDEEGLMEY 605
>AT4G00570.1 | Symbols: | malate oxidoreductase, putative |
chr4:242817-246522 REVERSE
Length = 607
Score = 270 bits (691), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/255 (52%), Positives = 185/255 (72%), Gaps = 8/255 (3%)
Query: 84 GVLNAARKTMARMLGNNESAFESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASR 143
GV A + +ARM G +ES A F+++D GL+T ER +DP A+ FA+ E
Sbjct: 344 GVTKMAVQAVARMAGISES---EATKNFYLIDKDGLVTTERTKLDPGAVLFAKNPAE--- 397
Query: 144 QGLREGASLVEVVREVKPDVLLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAE 203
+REGAS+VEVV++V+P VLLGLS VGG+F++EVL+A++ S S +PA+FAMSNPT NAE
Sbjct: 398 --IREGASIVEVVKKVRPHVLLGLSGVGGIFNEEVLKAMRESDSCKPAIFAMSNPTLNAE 455
Query: 204 CTPEEAFSILGDNIIFASGSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIIS 263
CT +AF G NI+FASGSPF++V+L NG VGH NQ NNMYLFPGIGLGTLLSG+RI++
Sbjct: 456 CTAADAFKHAGGNIVFASGSPFENVELENGKVGHVNQANNMYLFPGIGLGTLLSGARIVT 515
Query: 264 DGMLQAAAECLAAYMTEEEVLQGVIYPSTSRIRDITKQXXXXXXXXXXXXDLAEGYREMD 323
DGMLQAA+ECLA+YMT+EEV +G++YPS + IR IT + D+AEG+ ++
Sbjct: 516 DGMLQAASECLASYMTDEEVQKGILYPSINNIRHITAEVGAAVLRAAVTDDIAEGHGDVG 575
Query: 324 ARELRKLNEVHILSF 338
++L +++ +++
Sbjct: 576 PKDLSHMSKEDTVNY 590
>AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzyme
3); malate dehydrogenase (oxaloacetate-decarboxylating)
(NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
NADPH, NAD or NADP as acceptor | chr5:9024549-9028260
FORWARD
Length = 588
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 118/196 (60%), Gaps = 9/196 (4%)
Query: 104 FESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASRQGLREGASLVEVVREVKPDV 163
+ R + W+VD++GLI ER E+L ++ + ++E L+ V +KP V
Sbjct: 359 IDETRKKIWLVDSKGLIVSERK----ESLQHFKQPWAHDHKPVKE---LLAAVNAIKPTV 411
Query: 164 LLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAECTPEEAFSILGDNIIFASGS 223
L+G S VG F+KEV+EA+ + + +P + A+SNPT AECT EEA++ IFASGS
Sbjct: 412 LIGTSGVGKTFTKEVVEAM-ATLNEKPLILALSNPTSQAECTAEEAYTWTKGRAIFASGS 470
Query: 224 PFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAYMTEEEV 283
PF V +G Q NN Y+FPG+GLG ++SG+ + D ML AA+E LA+ +TEE
Sbjct: 471 PFDPVQY-DGKKFTPGQANNCYIFPGLGLGLIMSGAIRVRDDMLLAASEALASQVTEENF 529
Query: 284 LQGVIYPSTSRIRDIT 299
G+IYP + IR I+
Sbjct: 530 ANGLIYPPFANIRKIS 545
>AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzyme
1); malate dehydrogenase (oxaloacetate-decarboxylating)
(NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
NADPH, NAD or NADP as acceptor | chr2:8592106-8595403
REVERSE
Length = 581
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 123/200 (61%), Gaps = 9/200 (4%)
Query: 102 SAFESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASRQGLREGASLVEVVREVKP 161
++ E +R + W+VD++GLI R ++L +K + +++ L+ ++ +KP
Sbjct: 350 ASVEESRKKIWLVDSKGLIVNSRK----DSLQDFKKPWAHEHEPVKD---LLGAIKAIKP 402
Query: 162 DVLLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAECTPEEAFSILGDNIIFAS 221
VL+G S VG F+KEV+EA+ S + RP + A+SNPT +ECT EEA++ IFAS
Sbjct: 403 TVLIGSSGVGRSFTKEVIEAM-SSINERPLIMALSNPTTQSECTAEEAYTWSKGRAIFAS 461
Query: 222 GSPFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAYMTEE 281
GSPF V+ G V Q NN Y+FPG GLG ++SG+ + D ML AAAE LA +++E
Sbjct: 462 GSPFDPVEY-EGKVFVSTQANNAYIFPGFGLGLVISGAIRVHDDMLLAAAEALAGQVSKE 520
Query: 282 EVLQGVIYPSTSRIRDITKQ 301
+G+IYPS S IR I+ Q
Sbjct: 521 NYEKGMIYPSFSSIRKISAQ 540
>AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzyme
2); malate dehydrogenase (oxaloacetate-decarboxylating)
(NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
NADPH, NAD or NADP as acceptor | chr5:3754456-3758040
FORWARD
Length = 588
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 117/193 (60%), Gaps = 9/193 (4%)
Query: 107 ARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASRQGLREGASLVEVVREVKPDVLLG 166
R + W+VD++GLI R E+L ++ + +++ L+ V +KP VL+G
Sbjct: 362 TRKKIWLVDSKGLIVSSRK----ESLQHFKQPWAHEHKPVKD---LIGAVNAIKPTVLIG 414
Query: 167 LSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAECTPEEAFSILGDNIIFASGSPFK 226
S VG F+KEV+EA+ + + +P + A+SNPT AECT E+A++ IF SGSPF
Sbjct: 415 TSGVGQTFTKEVVEAM-ATNNEKPLILALSNPTSQAECTAEQAYTWTKGRAIFGSGSPFD 473
Query: 227 DVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAYMTEEEVLQG 286
V + +G Q NN Y+FPG+GLG ++SG+ + D ML AA+E LAA +TEE G
Sbjct: 474 PV-VYDGKTYLPGQANNCYIFPGLGLGLIMSGAIRVRDDMLLAASEALAAQVTEEHYANG 532
Query: 287 VIYPSTSRIRDIT 299
+IYP S IR+I+
Sbjct: 533 LIYPPFSNIREIS 545
>AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzyme
4); malate dehydrogenase (oxaloacetate-decarboxylating)
(NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
NADPH, NAD or NADP as acceptor | chr1:30007655-30011179
REVERSE
Length = 646
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 114/196 (58%), Gaps = 9/196 (4%)
Query: 104 FESARSQFWVVDAQGLITEERPNIDPEALPFARKVKEASRQGLREGASLVEVVREVKPDV 163
E AR W+VD++GLI R E++ +K + +RE LV+ V+ +KP V
Sbjct: 417 LEEARKNIWLVDSKGLIVSSRK----ESIQHFKKPWAHDHEPIRE---LVDAVKAIKPTV 469
Query: 164 LLGLSAVGGLFSKEVLEALKGSTSTRPAVFAMSNPTKNAECTPEEAFSILGDNIIFASGS 223
L+G S VG F+++V+E + + +P + ++SNPT +ECT EEA++ IFASGS
Sbjct: 470 LIGTSGVGQTFTQDVVETM-AKLNEKPIILSLSNPTSQSECTAEEAYTWSQGRAIFASGS 528
Query: 224 PFKDVDLGNGHVGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAECLAAYMTEEEV 283
PF V+ G Q NN Y+FPG GLG ++SG+ + D ML AA+E LA + EE
Sbjct: 529 PFAPVEY-EGKTFVPGQANNAYIFPGFGLGLIMSGTIRVHDDMLLAASEALAEELMEEHY 587
Query: 284 LQGVIYPSTSRIRDIT 299
+G+IYP IR I+
Sbjct: 588 EKGMIYPPFRNIRKIS 603